Melbourne Brain Genome Project


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This form enables uploading of a file of SAGE tags, which are then matched against tags previously extracted from known datasets. 10 base pair (bp) tags for SAGE (17 base pair tags for longSAGE) were extracted from these files, based on the criteria of 3' most CATG, and/or polyA tail and/or poly A signals. (A polyA signal indicates a mature 3' untranslated region, formed by polyadenylation of the pre-mRNA). This aids with assigning tags to positions in the genome. All datasets with an asterix are updated weekly. Other datasets will be added as the site develops. If there is a particular dataset that you would be interested in seeing added to the site, please . To save your results, simply save the page and open in Microsoft Excel.

The file should be in the following tab-delimitedformat:
[yourlibraryidentifier_tagcount] [10 bp tag SAGE or 17 bp tag longSAGE]

For example:
mycortexlibrary_13 TTGGCGCTAG
mycortexlibrary_25 GTAAGCTGTA
mycortexlibrary_40 CCCTGAACAA

An example file can be found here.

Please upload a file of sage tags:
Please select a dataset to match your SAGE tags against:-
*NCBI Reference Sequence Collection: SAGE
reference sequence reviewed
reference sequence provisional
reference sequence predicted
reference sequence model
reference sequence known
*NCBI Reference Sequence Collection: longSAGE
LongSAGE : reviewed
LongSAGE : provisional
LongSAGE : predicted
LongSAGE : model
LongSAGE : known
Pathways:
reelin pathway
NFKB mediated signaling pathway
Gene families:
cell adhesion genes
Microarray stem cell genes (SAGE)
Ensembl genes (SAGE)
Ensembl genes (longSAGE)
ALzheimer genes
[info]
Neocortex genes
[info]
Cerebellum genes
[info]
RIKEN full length cDNAs
[info]
SAGEmap reliable mappings
Short SAGE tags
Long SAGE tags
All exon sequence aligned to genome
mRNA (source : UCSC)
Other complete databases
All MGI sequence

Details on the datasets used.

NCBI Reference Sequence Collection : SAGE

The NCBI Reference Sequence Collection is divided into five groups, partially to aid with determining higher quality matches, and partially to aid with speed. These are large databases and it would not be feasible to implement them as one database.

Reference Sequence : reviewed. The RefSeq record has been reviewed by NCBI staff. The review process includes reviewing available sequence data and frequently also includes a review of the literature. The genomic/mRNA/protein RefSeq records may have expanded sequence and annotation including addition of pubications and features, as deemed relevant. This dataset is the smallest of all of the RefSeq datasets.
[111 tags as of 23/05/2003]

Reference sequence : provisional. The RefSeq record has not yet been subject to individual review. The sequence-to-gene name associations have been established by outside collaborators and NCBI staff.
[10,846 tags as of 23/05/2003]

Reference Sequence : predicted. Some aspect of the RefSeq record is predicted and there is supporting evidence that the locus is valid. The existence of the mRNA is supported by existing cDNA, EST, and/or closely related homologous sequences. For mRNA/protein records, this status code primarily indicates that while a mRNA provides experimental evidence for the locus, the protein has been predicted.
[5,033 tags as of 23/05/2003]

Reference Sequence : model. This identifies the contig (NT_ accessions), mRNA (XM_), non-coding transcript (XR_) RefSeq records provided by the NCBI Genome Annotation process. These records are provided via automated processing.
[9,191 tags as of 23/05/2003]

Reference Sequence : known. Contains all reviewed, provisional and predicted records, including genomic regions (NG_) and those from the complete genomes project. Useful for quick identification of an entire SAGE library.
[15,972 tags as of 23/05/2003]


LongSAGE : reviewed. As for the SAGE reviewed, but composed of 17 bp (as opposed to 10 bp) tags

LongSAGE : provisional. As for the SAGE provisional, but composed of 17 bp (as opposed to 10 bp) tags

LongSAGE : predicted. As for the SAGE predicted, but composed of 17 bp (as opposed to 10 bp) tags

LongSAGE : reviewed. As for the SAGE reviewed, but composed of 17 bp (as opposed to 10 bp) tags

LongSAGE : model. As for the SAGE model, but composed of 17 bp (as opposed to 10 bp) tags

LongSAGE : known. As for the SAGE known, but composed of 17 bp (as opposed to 10 bp) tags


NFkB Database description.
Genes genes related to NFkB mediated signal transduction. Provides information on the expression profiles of the Rel/NFkB/IkB family, marker genes responsive to NFkB Signaling, related ligands/receptors and other genes involved in NFkB signal transduction

Unigene Accession Description
Mm.2444 X01023 c-myc Mouse normal c-myc gene and translocated homologue from J558 plasmocytoma cells
Mm.4869 X15842 c-rel Murine mRNA for c-rel protein
Mm.5245 M87862 ELAM-1 (E-selectin) Mus musculus E-selectin protein mRNA
Mm.1238 M13926 G-CSF Colony stimulating factor, granulocyte
Mm.28973 M31585 ICAM-1 Mouse (clone lambda-c5e) intercellular adhesion molecule 1
Mm.168 V00756 IFN-Gamma E Interferon beta, fibroblast
Mm.8884 U36277 IGamma N BGamma D (mad3) Mus musculus I-kappa B alpha chain
Mm.3996 U12473 IKK-Gamma D Conserved helix-loop-helix ubiquitous kinase
Mm.28269 AF026524 IKK-Gamma E Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
Mm.12967 AF069542 IKK-\Gamma J Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
Mm.37672 AB016589 IKK-i Mus musculus IKK-i mRNA for inducible IKappaB kinase, complete cds
Mm.14190 K02292 IL-2 Mouse interleukin-2
Mm.1019 J03783 IL-6 Interleukin 6 (interferon, beta 2)
Mm.2893 M92649 iNOS Inducible nitric oxide synthase
Mm.1246 NM_008390 IRF-1 Interferon regulatory factor 1
Mm.89123 L13763 MCP-1 (emb, pou1, Gp70, Scya2) Mus musculus transcription regulatory protein MCP-1 (POU 1) mRNA
Mm.3420 M57999 NFGamma N B1 Nuclear factor of kappa light chain gene enhancer in B-cells 1 p105
Mm.20225 AF155373 NFGamma N B2 Mus musculus nuclear factor kappa B subunit p100
N/A AF143094 NIK Mus musculus NF-kappaB inducing kinase (Nik)
Mm.3337 M87861 P-selectin Mus musculus P-selectin protein mRNA
Mm.1293 NM_013693 TNF-Gamma D Mus musculus tumor necrosis factor (Tnf)
Mm.87787 M16819 TNF-Gamma E Mouse tumor necrosis factor-beta mRNA
Mm.1021 M84487 VCAM-1 Vascular cell adhesion molecule 1
Mm.103618 M12481 Gamma E -actin Cytoplasmic beta-actin
Mm.5289 M32599 GAPDH Glyceraldehyde-3-phosphate dehydrogenase


Gene Families

Cell adhesion genes. These SAGE tags were extracted from a collection which includes cell adhesion and extracellular matrix proteins, Integrins, Cadherin and Catenins, Selectins, Immunoglobulin (Ig) superfamily, Extracellular matrix proteins, Matrix metalloproteinases, Serine proteinases, Cystein proteinases, and Protease inhibitors.

Ensembl genes. These SAGE tags were extracted from the main gene set as predicted by Ensembl, which corresponds either to near full-length cDNA and/or protein sequences already available in the public sequence databases (known genes), plus novel evidence-based predictions (novel genes). The tags were taken from the mouse genome assembly version 3 [MGSC 11.3.1]. The id returned is the ensembl internal id.

Microarray stem cell genes. These SAGE tags were extracted from GEArray S Series Mouse Stem Cell Array from SuperArray. This array is designed to profile the expression of genes known to be important for the identification, growth and differentiation of mouse stem cells. The array contains over 260 known genes that encode markers of stem cells and their various stages of differentiation, growth factors and cytokines, extracellular matrix markers and other proteins. A total of 233 tags were extracted from this gene list.

NM_007558.1 Mus musculus bone morphogenetic protein 8a (Bmp8a), mRNA" y n TCATTAATCC
BC042611.1 Mus musculus, bone morphogenetic protein receptor, type 1A, clone MGC:36094 IMAGE:5364272, mRNA, complete cds" y n TGAAAAGAAA
NM_009612.1 Mus musculus activin A receptor, type II-like 1 (Acvrl1), mRNA" y n AAAAAGGTGG
NM_010612.2 Mus musculus kinase insert domain protein receptor (Kdr), mRNA" y n ACCCAAGAAT
NM_008729.1 Mus musculus catenin delta 2 (Catnd2), mRNA" y n CATACACCAC
NM_009519.1 Mus musculus wingless-related MMTV integration site 11 (Wnt11), mRNA" y n GAACCACTAA
BC033459.1 Mus musculus, Similar to numb gene homolog (Drosophila), clone MGC:28234 IMAGE:3991630, mRNA, complete cds" y n AAGGGCTGTT
BQ715902.1 BQ715902 AGENCOURT_8482887 NIH_MGC_129 Mus musculus cDNA clone IMAGE:6306172 5', mRNA sequence" y n GTGGTGGGGG
NM_009522.1 Mus musculus wingless-related MMTV integration site 3A (Wnt3a), mRNA" y n GGGACACAGT
BC028256.1 Mus musculus, Similar to erbb2 interacting protein, clone IMAGE:4988135, mRNA, partial cds" y n GCTATTTGGA
NM_011858.1 Mus musculus odd Oz/ten-m homolog 4 (Drosophila) (Odz4), mRNA n n CTCTGGAAAT
NM_010896.1 Mus musculus neurogenin 1 (Neurog1), mRNA n n CACAACCTCA
AK081351.1 Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130009G16 product:gap junction membrane channel protein alpha 7, full insert sequence n n AAGAGGATCC
AK079100.1 Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330187D14 product:fibroblast growth factor 14, full insert sequence n n CACACACATC
AK050240.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730029L05 product:cyclin-dependent kinase inhibitor 1B (P27), full insert sequence n n GGAGGGTTTC
AK049177.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011H01 product:phosphatidylethanolamine binding protein, full insert sequence n n GGACCAGACT
AK043202.1 Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730069C18 product:superiorcervical ganglia, neural specific 10, full insert sequence n n AGCGAGGGAA
AK041246.1 Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530094G04 product:activin receptor IIA, full insert sequence n n ATATAAGATG
AK033175.1 Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030453F01 product:vimentin, full insert sequence n n CAAGATTGAA
AK031265.1 Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930439E13 product:cadherin 3, full insert sequence n n GGTGATGGAG
AK030713.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730403E12 product:SRY-box containing gene 6, full insert sequence n n CCAAAATAAT
AK028989.1 Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732479B04 product:SRY-box containing gene 4, full insert sequence n n ACAGGCACGA
AK084544.1 Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330013N04 product:myosin light chain, alkali, cardiac atria, full insert sequence n n ACCGAAAGGT
AK008922.1 Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210414E06 product:FIBROBLAST GROWTH FACTOR-22 PRECURSOR (FGF-22) homolog [Mus musculus], full insert sequence n n GGCTCTGCTT
NM_008957.1 Mus musculus patched homolog (Ptch), mRNA n n TCAGGTGTGA
NM_008958.1 Mus musculus patched homolog 2 (Ptch2), mRNA n n ACTGTGGCCC
NM_008746.3 Mus musculus neurotrophic tyrosine kinase, receptor, type 3 (Ntrk3), mRNA n n GATGAAGCAA
NM_019448.1 Mus musculus DNA (cytosine-5-)-methyltransferase 3-like (Dnmt3l), mRNA n n TTTCTCTGAA
NM_011123.1 Mus musculus proteolipid protein (myelin) (Plp), mRNA n n AAATTATTGG
NM_011400.1 Mus musculus solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA n n AGAAGGACCT
NM_010205.1 Mus musculus fibroblast growth factor 8 (Fgf8), mRNA n n AAGCGCCTGC
NM_009235.1 Mus musculus SRY-box containing gene 15 (Sox15), mRNA n n CCAGTAACCC
NM_030614.1 Mus musculus fibroblast growth factor 16 (Fgf16), mRNA n n TCCAGAGATC
NM_030610.1 Mus musculus fibroblast growth factor 20 (Fgf20), mRNA n n GAAACACGGG
NM_021272.1 Mus musculus fatty acid binding protein 7, brain (Fabp7), mRNA n n ATAAATCCCC
NM_013627.1 Mus musculus paired box gene 6 (Pax6), mRNA n n AATTCAAAAA
NM_013565.1 Mus musculus integrin alpha 3 (Itga3), mRNA n n GTTCTCTGTG
NM_011693.1 Mus musculus vascular cell adhesion molecule 1 (Vcam1), mRNA n n GTACTGTACG
NM_010563.1 Mus musculus internexin neuronal intermediate filament protein, alpha (Ina), mRNA n n ACGCATCTGT
NM_010198.1 Mus musculus fibroblast growth factor 11 (Fgf11), mRNA n n TACCGGGAGC
NM_009887.1 Mus musculus cerberus 1 homolog (Xenopus laevis) (Cer1), mRNA n n AACAGTATTA
NM_008401.1 Mus musculus integrin alpha M (Itgam), mRNA n n ATGAATGAAG
NM_008107.1 Mus musculus growth differentiation factor 1 (Gdf1), mRNA n n TTTTATTGGT
NM_008055.1 Mus musculus frizzled homolog 4 (Drosophila) (Fzd4), mRNA n n CCTAATGAGA
NM_007989.1 Mus musculus forkhead box H1 (Foxh1), mRNA n n TAAAAAAAAA
NM_008937.1 Mus musculus prospero-related homeobox 1 (Prox1), mRNA n n GATATGTTGT
NM_008900.1 Mus musculus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA n n ACGCCCCCTG
NM_008899.1 Mus musculus POU domain, class 3, transcription factor 2 (Pou3f2), mRNA n n TGCAAGCTGA
NM_009368.1 Mus musculus transforming growth factor, beta 3 (Tgfb3), mRNA n n GATGACTTCA
NM_009354.1 Mus musculus telomerase reverse transcriptase (Tert), mRNA n n AAAAAAAAAA
AY057908.1 Mus musculus brain-derived neurotrophic factor BDNF1 (Bdnf) mRNA, complete cds, alternatively spliced n n TAAAACAAGA
NM_021458.1 Mus musculus frizzled homolog 3 (Drosophila) (Fzd3), mRNA n n CTTATTTTAT
NM_021457.1 Mus musculus frizzled homolog 1, (Drosophila) (Fzd1), mRNA n n ACGCTGATTG
NM_021359.1 Mus musculus integrin beta 6 (Itgb6), mRNA n n ACCGGAAGGA
NM_020013.1 Mus musculus fibroblast growth factor 21 (Fgf21), mRNA n n GTAGAGCCTT
NM_013607.1 Mus musculus myosin heavy chain 11, smooth muscle (Myh11), mRNA n n TCAGGGAAAA
NM_013584.1 Mus musculus leukemia inhibitory factor receptor (Lifr), mRNA n n TATCAGCCGC
NM_013518.1 Mus musculus fibroblast growth factor 9 (Fgf9), mRNA n n CGGTGGGTTC
NM_008711.1 Mus musculus noggin (Nog), mRNA n n GTGTGTAAGC
NM_009756.1 Mus musculus bone morphogenetic protein 10 (Bmp10), mRNA n n ATTGATGATT
NM_011577.1 Mus musculus transforming growth factor, beta 1 (Tgfb1), mRNA n n ATTGTGCGCT
NM_011057.1 Mus musculus platelet derived growth factor, B polypeptide (Pdgfb), mRNA n n TGCCCTTCAG
NM_010919.1 Mus musculus NK2 transcription factor related, locus 2 (Drosophila) (Nkx2-2), mRNA n n TACACGTTCT
NM_010577.1 Mus musculus integrin alpha 5 (fibronectin receptor alpha) (Itga5), mRNA n n ATCCCGAAGA
NM_010560.1 Mus musculus interleukin 6 signal transducer (Il6st), mRNA n n CCGCAGTGAA
NM_010512.1 Mus musculus insulin-like growth factor 1 (Igf1), mRNA n n CCCAAGACTC
NM_010207.1 Mus musculus fibroblast growth factor receptor 2 (Fgfr2), mRNA n n CCACCTTTGA
NM_010197.1 Mus musculus fibroblast growth factor 1 (Fgf1), mRNA n n TACAAACCCA
NM_010066.1 Mus musculus DNA methyltransferase (cytosine-5) 1 (Dnmt1), mRNA n n GGCAAGCAGG
NM_010067.1 Mus musculus DNA methyltransferase 2 (Dnmt2), mRNA n n AATAATATAA
NM_010052.1 Mus musculus delta-like 1 homolog (Drosophila) (Dlk1), mRNA n n ATAATGAATA
NM_009878.1 Mus musculus cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) (Cdkn2d), mRNA n n AGTTCATTTT
NM_009868.1 Mus musculus cadherin 5 (Cdh5), mRNA n n ATCGACGTGA
NM_009867.1 Mus musculus cadherin 4 (Cdh4), mRNA n n ACAGTCCCTA
NM_008808.1 Mus musculus platelet derived growth factor, alpha (Pdgfa), mRNA n n TGCGACCTCC
NM_007560.1 Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA n n TTGCTTTCTA
NM_007554.1 Mus musculus bone morphogenetic protein 4 (Bmp4), mRNA n n TTGTACCTGG
NM_007553.1 Mus musculus bone morphogenetic protein 2 (Bmp2), mRNA n n GTTGTGGAGG
NM_007394.1 Mus musculus activin A receptor, type 1 (Acvr1), mRNA n n TTCCAGGGGG
NM_008469.1 Mus musculus keratin complex 1, acidic, gene 15 (Krt1-15), mRNA n n CTGCTGGACA
NM_008404.1 Mus musculus integrin beta 2 (Itgb2), mRNA n n AGTTATCATA
NM_008402.1 Mus musculus integrin alpha V (Itgav), mRNA n n AGAATGGCGA
NM_008380.1 Mus musculus inhibin beta-A (Inhba), mRNA n n ATTGTGGAGG
NM_008127.1 Mus musculus gap junction membrane channel protein beta 4 (Gjb4), mRNA n n AAAAAAAAAA
NM_008058.1 Mus musculus frizzled homolog 8 (Drosophila) (Fzd8), mRNA n n TGCCTAGTAG
NM_008057.1 Mus musculus frizzled homolog 7 (Drosophila) (Fzd7), mRNA n n GTAGGGAGAG
NM_008007.1 Mus musculus fibroblast growth factor 3 (Fgf3), mRNA n n GCAAGATGGA
NM_008005.1 Mus musculus fibroblast growth factor 18 (Fgf18), mRNA n n ACAAAGGACT
NM_008816.1 Mus musculus platelet/endothelial cell adhesion molecule (Pecam), mRNA n n TTGGGTATAC
NM_008716.1 Mus musculus Notch gene homolog 3, (Drosophila) (Notch3), mRNA n n GAGAGGAATA
NM_008634.1 Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA n n TACAGAAGAT
NM_008632.1 Mus musculus microtubule-associated protein 2 (Mtap2), mRNA n n AGCTCTTGGC
NM_008501.1 Mus musculus leukemia inhibitory factor (Lif), mRNA n n GCTCCCTGAT
NM_009525.1 Mus musculus wingless-related MMTV integration site 5B (Wnt5b), mRNA n n GGCTTGAGAG
NM_009523.1 Mus musculus wingless-related MMTV integration site 4 (Wnt4), mRNA n n CGGGTGGAGT
NM_009382.1 Mus musculus thymus cell antigen 1, theta (Thy1), mRNA n n AGCTCCAATA
NM_009351.1 Mus musculus telomerase associated protein 1 (Tep1), mRNA n n TGCTTCCGGG
NM_009237.1 Mus musculus SRY-box containing gene 3 (Sox3), mRNA n n TACCTGCCAC
NM_009200.1 Mus musculus solute carrier family 1, member 6 (Slc1a6), mRNA n n TTCTGTGTGG
NM_007614.1 Mus musculus catenin beta (Catnb), mRNA n n TGTGGAAGTT
NM_023653.1 Mus musculus wingless-related MMTV integration site 2 (Wnt2), mRNA n n AAAAAAAAAA
BI251855.1 BI251855 602995319F1 NCI_CGAP_Mam5 Mus musculus cDNA clone IMAGE:5150981 5', mRNA sequence n n TGATACAATT
AJ252157.1 MMU252157 Mus musculus mRNA for forkhead protein FKHR (Fkhr gene) n n ATTGCTCTGT
AF033585.2 AF033585 Mus musculus frizzled-9 protein (Mfz9) mRNA, partial cds n n CAGGGAGTGG
AF092734.1 AF092734 Mus musculus growth/differentiation factor 11 mRNA, partial cds n n TTTTTCCACA
AJ010604.1 MMU010604 Mus musculus mRNA for transcription factor L-Sox5 n n TGTATTTGAT
AF059176.1 AF059176 Mus musculus EGF-like growth factor receptor ErbB4 extracellular domain mRNA, partial cds n n AACTTCAATG
AF056187.1 AF056187 Mus musculus insulin-like growth factor I receptor mRNA, complete cds n n GGCCTCTGCA
D32210.1 Mus musculus (Notch2) mRNA, complete cds n n AAGAGTAAAA
AF001286.1 AF001286 Mus musculus OCAM-GPI protein precursor mRNA, complete cds n n CTTTCCCAGT
X53176.1 MMIA4 Mouse integrin alpha-4 mRNA n n CTTGATGTTG
L24755.1 MUSBMP1A Mus musculus bone morphogenetic protein (Bmp-1) mRNA, complete cds n n CCCAGTTCGG
M60778.1 MUSLFA1 Mouse lymphocyte function-associated molecule-1 alpha subunit (LFA-1) mRNA, complete cds n n CCACCGTGTA
M25937.1 MUSGFAPA Mouse glial fibrillary acidic protein mRNA, 3' end n n TGAAACTTGG
L04678.1 MUSBE4SUBX Mouse integrin beta 4 subunit mRNA n n TAACCAAAAA
NM_010929.1 Mus musculus Notch gene homolog 4, (Drosophila) (Notch4), mRNA" y y GATAATAAAG
BC010200.1 Mus musculus, similar to fibroblast growth factor receptor 1, clone MGC:11564 IMAGE:3967874, mRNA, complete cds" y y GGGGAGACGC
NM_011058.1 Mus musculus platelet derived growth factor receptor, alpha polypeptide (Pdgfra), mRNA" y y TTTTGTTTTA
BC029203.1 Mus musculus, clone MGC:36792 IMAGE:4506903, mRNA, complete cds" y y CTTATGAGTT
BC018238.1 Mus musculus, fibroblast growth factor 13, clone MGC:25467 IMAGE:4481123, mRNA, complete cds" y y TACAGGCAGT
AF508809.1 Mus musculus notch 1 protein mRNA, complete cds" y y CCTAATAGAT
NM_021334.1 Mus musculus integrin alpha X (Itgax), mRNA" y y TTATCCTCAT
NM_008104.1 Mus musculus glial cells missing homolog 2 (Drosophila) (Gcm2), mRNA" y y TGACTATTCC
NM_008126.1 Mus musculus gap junction membrane channel protein beta 3 (Gjb3), mRNA" y y CGTATCCTGT
NM_010580.1 Mus musculus integrin beta 5 (Itgb5), mRNA" y y AACCTCTGAA
BC002148.1 Mus musculus, clone MGC:7265 IMAGE:3484864, mRNA, complete cds" y y AGCCAAAGGA
NM_013566.1 Mus musculus integrin beta 7 (Itgb7), mRNA" y y CAGCCAGCGG
M81342.1 MUSMFR3 BALB/c fibroblast growth factor receptor 3 (mFR3) mRNA, complete cds" y y AAAAAAAAAA
NM_008003.1 Mus musculus fibroblast growth factor 15 (Fgf15), mRNA" y y ACTTGTTTTC
AB038697.1 Mus musculus mRNA for Olig2 bHLH protein, complete cds" y y CGCGCTCCCT
AB038696.1 Mus musculus mRNA for Olig1 bHLH protein, complete cds" y y CCATCGGTGT
X15052.1 MMNCAMR3 Mouse mRNA for 3'-end of NCAM-140 and NCAM-180 isoforms y y CCCAGGGTCT
NM_016701.2 Mus musculus nestin (Nes), mRNA" y y CCCAGAGGAG
NM_010068.1 Mus musculus DNA methyltransferase 3B (Dnmt3b), mRNA" y y TTACCATTTT
M92416.1 MUSFGFAB Mus musculus fibroblast growth factor (Fgf6) mRNA, 3' end" y y TCCCAGCAAG
NM_016958.1 Mus musculus keratin complex 1, acidic, gene 14 (Krt1-14), mRNA" y y CTGCTCAGGC
NM_010663.1 Mus musculus keratin complex 1, acidic, gene 17 (Krt1-17), mRNA" y y GTGACAAAAA
NM_008124.2 Mus musculus gap junction membrane channel protein beta 1 (Gjb1), mRNA" y y TCGGTGGGGA
AF276754.1 AF276754 Mus musculus preproglucagon mRNA, complete cds" y y ACCACCTGGT
AF275367.1 AF275367 Mus musculus epidermal growth factor receptor (Egfr) mRNA, complete cds" y y TTGATCACAG
NM_007557.1 Mus musculus bone morphogenetic protein 7 (Bmp7), mRNA" y y AATGAAAAAA
NM_133654.1 Mus musculus CD34 antigen (Cd34), mRNA" y y TGCTCCCTTG
BC030485.1 Mus musculus, fibroblast growth factor 12, clone MGC:40856 IMAGE:5369273, mRNA, complete cds" y y ATAGCAATTT
NM_009818.1 Mus musculus catenin alpha 1 (Catna1), mRNA" y y CTTCCCTGTT
X65506.1 MMMHRA1 M.musculus mRNA for type I keratin (MHR a-1) y y CAAAACCAGG
NM_016673.1 Mus musculus ciliary neurotrophic factor receptor (Cntfr), mRNA" y y AGAAAAAAAA
BC038365.1 Mus musculus, Similar to nerve growth factor receptor, clone MGC:35588 IMAGE:5367638, mRNA, complete cds" y y TTCCCTGACA
NM_013611.2 Mus musculus nodal (Nodal), mRNA" y y GTGGACTTTA
NM_011393.1 Mus musculus solute carrier family 1, member 2 (Slc1a2), mRNA" y y AGTATTCCGC
NM_146007.1 Mus musculus procollagen, type VI, alpha 2 (Col6a2), mRNA" y y CCCAATGGCC
NM_172647.1 Mus musculus F11 receptor (F11r), mRNA n y GGGACAGTTT
NM_008935.1 Mus musculus prominin-like 1 (Proml1), mRNA n y AATGAACAGA
NM_008814.1 Mus musculus insulin promoter factor 1, homeodomain transcription factor (Ipf1), mRNA n y AAGTGGAAAA
NM_008907.1 Mus musculus peptidylprolyl isomerase A (Ppia), mRNA n y GAGCGTTTTG
NM_009371.2 Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA n y TATTCAAATA
AK090263.1 Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630030I18 product:ISL1 transcription factor, LIM/homeodomain, (islet-1), full insert sequence n y TCATTTGACT
AK090132.1 Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched library, clone:G431002P10 product:DNA methyltransferase 3A, full insert sequence n y AGCAGTGGTC
AK089780.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830019G17 product:interleukin 6, full insert sequence n y GGTCTCTCTC
AK082814.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330026I20 product:fibroblast growth factor 4, full insert sequence n y GACTGATGGG
AK077555.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730446E06 product:fibroblast growth factor 17, full insert sequence n y AAGTTTCTGA
AK077477.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730419J04 product:insulin-like growth factor binding protein 3, full insert sequence n y CGCTGTACAG
AK052447.1 Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430024L03 product:sonic hedgehog homolog, (Drosophila), full insert sequence n y TTCTTGGAAA
AK045267.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130053I21 product:fibroblast growth factor 10, full insert sequence n y CACCCTCGCT
AK045226.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130049I05 product:CD44 antigen, full insert sequence n