SAMPLE=GSM766 !Sample_status = Public on Nov 28 2001 !Sample_title = SAGE_Medullo_3871 !Sample_type = sage !Sample_anchor = NlaIII !Sample_organism = Mus musculus !Sample_target_source = medulloblastoma !Sample_tag_count = 43476 !Sample_description = This library represents a Cancer Genome Anatomy Project library, which was either produced through CGAP funding, or donated to CGAP. !Sample_description = The Cancer Genome Anatomy Project (CGAP: http://cgap.nci.nih.gov) is an interdisciplinary program established and administered by the National Cancer Institute (NCI: http://www.nci.nih.gov) to generate the information and technological tools needed to decipher the molecular anatomy of the cancer cell. !Sample_description = Tumor type: primary tumor in posterior fossa. Adult mouse PTCH +/1 knockout mouse constructed in the laboratory of Matt Scott (Stanford University) !Sample_description = Tissue supplier: ?? !Sample_description = Library constructed in the laboratory of G. Riggins, M.D., Ph.D. (Duke University). !Sample_description = Organ: brain !Sample_description = Lab host: DH10B !Sample_description = Vector: pZErO-1 !Sample_description = Vector type: plasmid !Sample_description = R. Site 1: Sph1 !Sample_description = R. Site 2: Sph1 !Sample_description = Library treatment: non-normalized !Sample_description = Tissue description: Brain, mouse primary medulloblastoma. PTCH +/- mouse number 3871 !Sample_description = Tissue supplier: Dr. Matt Scott !Sample_description = Sample type: Bulk !Sample_description = Producer: Riggins Laboratory !Sample_description = Clones generated to date: 2304 !Sample_description = Sequences generated to date: 1556 !Sample_keyword = brain !Sample_keyword = medulloblastoma !Sample_keyword = CGAP !Sample_keyword = non-normalized !Sample_keyword = SAGE library method !Sample_keyword = bulk !Sample_author = Matt,,Scott !Sample_author = Gregory,J,Riggins !Sample_author = Robert,L,Strausberg !Sample_web_link = http://cgap.nci.nih.gov !Sample_submission_date = Nov 28 2001 !Sample_submitter_name = Robert,L,Strausberg !Sample_submitter_email = cgapbs-r@mail.nih.gov !Sample_submitter_institute = National Cancer Institute !Sample_submitter_department = Cancer Genome Anatomy Project !Sample_submitter_city = Bethesda,MD,20892,USA !Sample_submitter_phone = 301-496-1550 !Sample_submitter_web_link = http://cgap.nci.nih.gov/ !Sample_platform_id = GPL11 !Sample_series_id = GSE14 #TAG = Ten base SAGE tag, LINK_PRE:"http://www.ncbi.nlm.nih.gov/SAGE/index.cgi?cmd=tagsearch&anchor=NLAIII&org=Mm&tag=" #COUNT = Absolute tag count #TPM = Tags per million, or (1000000*COUNT)/(Total tags)