gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_PN1.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count COUNT_PN1.TAG.count cctttaatcc 1 2.17184619255488e-29 0.144171779141104 47 326 49 113 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 2 1.39400243384612e-24 3.77333333333333 566 150 591 52 tgaccccggg 3 3.77179368514968e-19 7.2 288 40 301 14 tgggttgtct 4 1.28301269350466e-18 2.73160173160173 631 231 659 80 tggatcagtc 5 1.46350468496502e-17 4.40740740740741 357 81 373 28 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 6 2.69419251881188e-16 0.106918238993711 17 159 18 55 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 7 1.14783069908575e-14 25.8333333333333 155 6 162 2 tgtagtgtaa 8 4.14129945112073e-14 3.15748031496063 401 127 419 44 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 9 4.26738491505233e-14 0 0 78 0 27 cccttcttct 10 9.0217769591828e-14 17.2222222222222 155 9 162 3 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 11 1.29894082460909e-13 10.4705882352941 178 17 186 6 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 12 1.31811472208413e-13 0 0 75 0 26 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 13 3.25424402171715e-13 0.090909090909091 11 121 12 42 ggcttcggtc 14 2.62085644477609e-11 2.66666666666667 408 153 426 53 gcccgggaat 15 8.21860429879781e-11 3.6 270 75 282 26 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 16 8.21860429879781e-11 0.0277777777777778 2 72 2 25 ttgggccaga 17 2.85489809887139e-10 0.176470588235294 24 136 25 47 gtgaaactaa 18 6.29781054830131e-10 3.3974358974359 265 78 277 27 gtggctcaca 19 2.56714335166124e-09 0.608213096559378 548 901 572 312 cgtctgtgga 20 4.33687605504292e-09 0.226666666666667 34 150 36 52 gcccccctct 21 5.1463552323509e-09 0.0952380952380952 8 84 8 29 gtaagcaaaa 22 1.33959151295319e-08 5.80769230769231 151 26 158 9 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 23 1.83492666039186e-08 0.0181818181818182 1 55 1 19 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 24 3.69172133526352e-08 0.122222222222222 11 90 12 31 tagatatagg 25 4.1519986875293e-08 0.403571428571429 113 280 118 97 gaatgatctg 26 4.45548208061743e-08 Inf 78 0 81 0 agagcgaagt 27 8.43777340624985e-08 0.396153846153846 103 260 107 90 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 28 1.99870745792106e-07 0.144444444444444 13 90 14 31 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 29 2.54997302753814e-07 0.0655737704918033 4 61 4 21 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 30 3.64297853839751e-07 4.625 148 32 154 11 gcctaatgta 31 5.09138849551635e-07 2.69473684210526 256 95 267 33 aacaatttgg 32 1.57002707159426e-06 3.18032786885246 194 61 203 21 gccttccaat 33 1.57002707159426e-06 4.40625 141 32 147 11 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 34 1.73062774895990e-06 8.25 99 12 103 4 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 35 1.76601561000576e-06 3.51020408163265 172 49 180 17 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 36 1.79494832557791e-06 0.456747404844291 132 289 138 100 AF063095 knownGene chr12 87316486 - 30295 graph_last 12 93 cagacctcaa 37 4.40869493628891e-06 0.0434782608695652 2 46 2 16 ctgcctgccc 38 4.58519028417832e-06 0.319727891156463 47 147 49 51 ggcaagcccc 39 6.84099716779211e-06 2.96875 190 64 198 22 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 40 7.05405636671983e-06 0.0769230769230769 4 52 4 18 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 41 7.58741793257218e-06 0.090909090909091 5 55 5 19 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 42 8.32248813491422e-06 0.400990099009901 81 202 85 70 agcagcccct 43 1.10339324621182e-05 0 0 35 0 12 ggatggggag 44 2.6704949026326e-05 5.2 104 20 109 7 NM_008696 refGene chr1 40712852 - 1780 graph_last l 7 38 ctagaagcag 45 2.82881103348324e-05 0.0263157894736842 1 38 1 13 gtctgctgat 46 2.98256852217052e-05 3.30434782608696 152 46 159 16 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 47 3.73651211442211e-05 0.233333333333333 21 90 22 31 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 48 3.97852107684499e-05 0 0 32 0 11 ttcaaagagt 49 4.48258681677453e-05 0.147540983606557 9 61 9 21 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 50 5.14357877686836e-05 3.475 139 40 145 14 tgaaataaac 51 7.11664270987609e-05 11.3333333333333 68 6 71 2 gaagcaaaga 52 8.44145917468875e-05 19.6666666666667 59 3 62 1 gtaagcataa 53 0.000104021747461026 2.38888888888889 215 90 224 31 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 54 0.000136597714367463 19.3333333333333 58 3 61 1 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 55 0.000248963949934454 10.5 63 6 66 2 cactgttgag 56 0.000261225276756552 0.196969696969697 13 66 14 23 ggaagccact 57 0.000261225276756552 2.95918367346939 145 49 151 17 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 58 0.000300134079552544 0.163636363636364 9 55 9 19 gattccgtga 59 0.000350501051837989 2.28260869565217 210 92 219 32 tgcccagtgc 60 0.000350501051837989 0.153846153846154 8 52 8 18 aagatcaaga 61 0.000355275269882885 0.355371900826446 43 121 45 42 gaggctttgc 62 0.000393550648244339 0.142857142857143 7 49 7 17 atggggttgg 63 0.000409628653018107 0.0571428571428571 2 35 2 12 ctacgttctc 64 0.00045686723475611 18 54 3 56 1 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 65 0.000467891181637230 0.116279069767442 5 43 5 15 aagaggcaag 66 0.000967308976294157 4.04347826086957 93 23 97 8 NM_023871 refGene chr2 30346412 - 73215 graph_last 18 64 attcaaatcc 67 0.000979611443244837 0.0344827586206897 1 29 1 10 atgtctcaaa 68 0.00114608723643302 1.80346820809249 312 173 326 60 cagcatcacc 69 0.00114608723643302 3.375 108 32 113 11 tgtaacagga 70 0.00114901444022179 3.10526315789474 118 38 123 13 aagagtcttt 71 0.00117679708880833 0.0625 2 32 2 11 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 72 0.00117679708880833 0.0625 2 32 2 11 gaacattgca 73 0.00117679708880833 0.0625 2 32 2 11 NM_031404 refGene chr5 135974053 + 107867 graph_last l 15 82 gaacgcaagt 74 0.00117679708880833 0.0625 2 32 2 11 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 75 0.00117679708880833 0.562937062937063 161 286 168 99 tctctctgtt 76 0.00117679708880833 0.0625 2 32 2 11 NM_010925 refGene chr10 80555240 - 13897 graph_last l 9 108 acctgcatct 77 0.00127578071028099 0.105263157894737 4 38 4 13 tcttctcaca 78 0.00127578071028099 0.297619047619048 25 84 26 29 gccgttctta 79 0.00146258139128452 16.3333333333333 49 3 51 1 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 80 0.00168854935416412 5.28571428571429 74 14 77 5 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 81 0.00212043482669544 0.229508196721311 14 61 15 21 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 82 0.00235542726390188 0.373831775700935 40 107 42 37 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 83 0.00238933785605452 5.14285714285714 72 14 75 5 aaaacagtgg 84 0.00239864696733832 0.431654676258993 60 139 63 48 tgtactcaat 85 0.00263760662564616 1.99090909090909 219 110 229 38 NM_008634 refGene chr13 97881760 - 37324 graph_last 35 132 aaaccagagc 86 0.00277134935320009 0.0384615384615385 1 26 1 9 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 87 0.00277134935320009 0.0384615384615385 1 26 1 9 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 88 0.00320473257490551 Inf 35 0 37 0 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 89 0.00323108265906292 Inf 36 0 38 0 NM_019802 refGene chr6 73476551 - 113867 graph_last 4 80 aaacgaaagt 90 0.00337578964672138 0.0689655172413793 2 29 2 10 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 91 0.00337578964672138 5.07142857142857 71 14 74 5 ccttgaaata 92 0.00351329279573705 0.09375 3 32 3 11 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 93 0.00360780328109514 0.272727272727273 18 66 19 23 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 94 0.00483372669531881 14.6666666666667 44 3 46 1 atacttgaca 95 0.00506823477641822 0 0 20 0 7 NM_024186 refGene chr13 89915066 + 36756 graph_last l 2 19 catccggtca 96 0.00506823477641822 0 0 20 0 7 CF585278 all_est chr12 33782179 + 27240 graph_last 7 36 gagaaactga 97 0.00506823477641822 0 0 20 0 7 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 98 0.00506823477641822 0 0 20 0 7 tttattgact 99 0.00506823477641822 0 0 20 0 7 cctgatcttt 100 0.0061095190560001 0.368421052631579 35 95 37 33 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 101 0.00648121371326043 13.6666666666667 41 3 43 1 attctccagt 102 0.00686892861473019 2.15384615384615 168 78 175 27 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 103 0.00706205003406877 Inf 33 0 34 0 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 104 0.00739842948034763 2.69767441860465 116 43 121 15 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 105 0.0074979044543385 3.85 77 20 80 7 tcttaatgaa 106 0.00790773977652897 2.88571428571429 101 35 105 12 gcaataaatg 107 0.00807764999012432 2.46153846153846 128 52 134 18 gcagccccta 108 0.00811466954357827 0.0434782608695652 1 23 1 8 aatttcccct 109 0.00825832515457199 0.209302325581395 9 43 9 15 NM_010487 refGene chr9 22638223 - 135759 graph_last l 47 135 ccccacacac 110 0.00843715764747364 0.125 4 32 4 11 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 111 0.00843715764747364 4.64285714285714 65 14 68 5 taagtggaat 112 0.00843715764747364 4.64285714285714 65 14 68 5 BC052699 knownGene chr6 126842831 - 116923 graph_last l 137 519 aacccctgcc 113 0.00845774329828085 0.358024691358025 29 81 30 28 NM_026203 refGene chr10 21915572 + 10852 graph_last l 26 102 accctgctgt 114 0.00882688123149087 0.103448275862069 3 29 3 10 NM_031179 refGene chr1 56302543 - 2445 graph_last l 29 113 caaactgaag 115 0.00882688123149087 0.0769230769230769 2 26 2 9 NM_013874 refGene chr7 23389583 + 119824 graph_last l 36 114 gcggagcccc 116 0.00882688123149087 0.0769230769230769 2 26 2 9 NM_010064 refGene chr2 71555694 + 75596 graph_last l 5 69 tcggacaaaa 117 0.00882688123149087 0.0769230769230769 2 26 2 9 caaaaaaaaa 118 0.0102786877336035 Inf 32 0 33 0 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 119 0.0129208017639427 5.88888888888889 53 9 55 3 atagaggcaa 120 0.0135981410191803 7.5 45 6 47 2 aaaaaaaaaa 121 0.013864036800925 0.68 289 425 302 147 gcctccaagg 122 0.0143904811804456 0.560975609756098 115 205 120 71 tgaaaaaaaa 123 0.0143904811804456 4.75 57 12 59 4 gatgacacca 124 0.014651634506446 0.429906542056075 46 107 48 37 NM_011889 refGene chr15 83848784 + 48775 graph_last 10 98 gtgtacatac 125 0.0150470232583140 0.171428571428571 6 35 6 12 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 126 0.0153662805913243 4.35714285714286 61 14 64 5 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 127 0.0153662805913243 0 0 17 0 6 CA316586 all_est chr6 30663632 + 111294 graph_last l 19 56 agaggagctg 128 0.0153662805913243 0 0 17 0 6 gctgcctaga 129 0.0153662805913243 0 0 17 0 6 gttggaaaca 130 0.0153662805913243 0 0 17 0 6 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 131 0.0153662805913243 0 0 17 0 6 NM_008054 refGene chr10 40732120 + 11702 graph_last l 10 56 tgactctgaa 132 0.0153662805913243 0 0 17 0 6 NM_008065 refGene chr16 86134860 + 55647 graph_last 65 333 aattagttgt 133 0.0153914078130066 0.293103448275862 17 58 18 20 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 134 0.0153914078130066 0.293103448275862 17 58 18 20 aaatcctttc 135 0.0161941443004911 0.3125 20 64 21 22 aataaactgc 136 0.0166101989119094 5.66666666666667 51 9 53 3 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 137 0.0192111335898860 4.58333333333333 55 12 57 4 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 138 0.0193894997727778 12.3333333333333 37 3 39 1 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 139 0.0201342752665248 0.137931034482759 4 29 4 10 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 140 0.0211670879685288 0.79813953488372 858 1075 896 372 AK085367 knownGene chr8 119156583 + 133821 graph_last l 39 190 cttcggttgt 141 0.0214300574066862 0.210526315789474 8 38 8 13 ccctgggttc 142 0.0214445741119384 0.488188976377953 62 127 65 44 acagtgggga 143 0.0214968850205506 Inf 28 0 29 0 NM_007883 refGene chr18 20972896 + 63182 graph_last 140 717 aattcgcgga 144 0.0215965827812711 0.05 1 20 1 7 cacacacaca 145 0.0215965827812711 0.115384615384615 3 26 3 9 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 146 0.0215965827812711 2.78125 89 32 93 11 ggcagccccc 147 0.0215965827812711 0.05 1 20 1 7 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 148 0.0215965827812711 0.479338842975207 58 121 61 42 NM_009389 refGene chr9 63768355 + 138375 graph_last b 8 40 tcgtcgtgcc 149 0.0215965827812711 0.115384615384615 3 26 3 9 agaaataaat 150 0.0217837612525412 Inf 29 0 30 0 gaagtcggaa 151 0.0217837612525412 Inf 29 0 30 0 gagacagtga 152 0.0217837612525412 Inf 29 0 30 0 NM_144915 refGene chr5 142286412 + 108317 graph_last l 263 516 tatgaattaa 153 0.0218008544683761 5.44444444444444 49 9 51 3 NM_010267 refGene chr1 17332941 + 648 graph_last l 33 76 cagagtgtct 154 0.0219552861714887 0.0869565217391304 2 23 2 8 gccttggtga 155 0.0219552861714887 0.0869565217391304 2 23 2 8 NM_018799 refGene chr4 128521019 + 97495 graph_last l 28 66 tctatctcag 156 0.0219552861714887 0.0869565217391304 2 23 2 8 tcaaacttgg 157 0.0228413753032717 2.08695652173913 144 69 150 24 ggatttggct 158 0.024905814147076 1.74015748031496 221 127 231 44 agaggtgtag 159 0.0250940983857674 11.3333333333333 34 3 36 1 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 160 0.0254399047630423 11.6666666666667 35 3 37 1 NM_023603 refGene chr4 125949966 - 97273 graph_last l 40 132 ttgtgtgctg 161 0.0264003347923943 0.25 10 40 10 14 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 162 0.0294393044979875 3.4 68 20 71 7 tagggcaatc 163 0.0305209925474507 3.45 69 20 72 7 acccgccggg 164 0.0311267978987007 Inf 27 0 28 0 NM_057171 refGene chr17 34807771 + 58931 graph_last l 21 121 cctgccaaga 165 0.0311267978987007 0.1875 6 32 6 11 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 166 0.0327800752379723 2.30612244897959 113 49 118 17 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 167 0.0355020246776284 2.18181818181818 120 55 125 19 NM_009308 refGene chr18 31774468 + 63593 graph_last l 12 50 gaacctgtgg 168 0.0385981633533891 0.172413793103448 5 29 5 10 NM_173437 refGene chr1 138358972 - 6521 graph_last l 2 51 gcaaggctca 169 0.0385981633533891 0.172413793103448 5 29 5 10 aaaaaattga 170 0.0411379012357073 0.228571428571429 8 35 8 12 aaaagaggaa 171 0.0411379012357073 0 0 14 0 5 NM_011857 refGene chr8 48179124 - 129903 graph_last 2 24 acccctctgt 172 0.0411379012357073 0 0 14 0 5 NM_018815 refGene chr6 92559047 + 114978 graph_last 0 8 agaaggaggg 173 0.0411379012357073 0 0 14 0 5 agactatgca 174 0.0411379012357073 0.153846153846154 4 26 4 9 NM_031874 refGene chr9 22514478 - 135726 graph_last 0 11 aggtagaaga 175 0.0411379012357073 0 0 14 0 5 atgtgtgcaa 176 0.0411379012357073 0 0 14 0 5 BC021509 knownGene chr5 129833260 - 107354 graph_last 1 33 attacagcca 177 0.0411379012357073 0 0 14 0 5 cacagctctg 178 0.0411379012357073 0 0 14 0 5 ccaagggtcc 179 0.0411379012357073 0 0 14 0 5 NM_010828 refGene chr10 18446012 + 10611 graph_last s 1 20 cccgcctcgg 180 0.0411379012357073 0 0 14 0 5 ccttctgcct 181 0.0411379012357073 0 0 14 0 5 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 182 0.0411379012357073 0.153846153846154 4 26 4 9 ctgcagcggc 183 0.0411379012357073 0 0 14 0 5 NM_008060 refGene chr19 9056013 + 67898 graph_last l 3 11 gcagtgtact 184 0.0411379012357073 0 0 14 0 5 ggggttttat 185 0.0411379012357073 0 0 14 0 5 ggtcagtcgg 186 0.0411379012357073 Inf 25 0 26 0 gtaaaaaaaa 187 0.0411379012357073 2.54285714285714 89 35 93 12 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 188 0.0411379012357073 0.153846153846154 4 26 4 9 NM_026222 refGene chr3 34770123 + 84139 graph_last 1 26 gtgattttcc 189 0.0411379012357073 0 0 14 0 5 NM_021881 refGene chr17 9967167 - 56956 graph_last l 4 22 taatgaaatt 190 0.0411379012357073 0 0 14 0 5 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 191 0.0411379012357073 0 0 14 0 5 NM_013725 refGene chr7 38100510 - 120754 graph_last 141 373 tctgtgcacc 192 0.0411379012357073 0.359375 23 64 24 22 NM_133791 refGene chr8 47689575 - 129872 graph_last l 3 19 tgcccggtgt 193 0.0411379012357073 0 0 14 0 5 NM_145465 refGene chr14 114360138 + 44472 graph_last l 5 24 tgggaacctt 194 0.0411379012357073 0 0 14 0 5 tgggacgcca 195 0.0411379012357073 0 0 14 0 5 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 196 0.0411379012357073 Inf 25 0 26 0 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 197 0.0411379012357073 0 0 14 0 5 tgtgtttgtg 198 0.0411379012357073 0 0 14 0 5 tttttgatga 199 0.0425634713304370 0.327272727272727 18 55 19 19 ctaataaagc 200 0.0465703734138261 1.78217821782178 180 101 188 35 ccagtcctgg 201 0.0470547135073439 0.375 24 64 25 22 AK010485 knownGene chr15_random 13961085 + 50719 graph_last 1 27 aattctctgt 202 0.0476396188979606 0.130434782608696 3 23 3 8 acacagaaac 203 0.0476396188979606 0.130434782608696 3 23 3 8 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 204 0.0476396188979606 10.6666666666667 32 3 33 1 NM_026769 refGene chr7 131959952 - 125952 graph_last l 32 121 cacactgcct 205 0.0476396188979606 0.130434782608696 3 23 3 8 NM_009668 refGene chr18 32621656 + 63661 graph_last l 84 207 ttcagggcgg 206 0.0476396188979606 0.130434782608696 3 23 3 8 NM_013540 refGene chr3 82528196 - 86190 graph_last l 7 21 acactttctt 207 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_008634 refGene chr13 97869372 + 37324 graph_last 0 16 atcaggagtg 208 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_146243 refGene chr11 19961775 + 18008 graph_last 22 71 cacacagact 209 0.0511641398095455 0.1 2 20 2 7 genomic chr2 131320194 - 0 unique_long l 14 62 ccatcagtgg 210 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_007828 refGene chr10 83563948 + 14173 graph_last b 8 51 ccgcgcaaca 211 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_009440 refGene chrX 93368218 - 150509 graph_last l 22 55 ctatgtgttg 212 0.0511641398095455 0.1 2 20 2 7 NM_008745 refGene chr13 58919793 + 35397 graph_last l 24 60 ctgaagcccg 213 0.0511641398095455 0.0588235294117647 1 17 1 6 ggaaggatag 214 0.0511641398095455 0.0588235294117647 1 17 1 6 AF172088 knownGene chr7 110055240 - 124600 graph_last l 23 121 ggatcattct 215 0.0511641398095455 0.1 2 20 2 7 AK052734 knownGene chr11 72496802 + 21327 graph_last l 10 30 gtgatcagca 216 0.0511641398095455 0.0588235294117647 1 17 1 6 genomic chr9 69502315 - 0 unique_long l 14 46 tccagaaaat 217 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_013876 refGene chr4 108313676 - 96057 graph_last l 24 76 tttaaattgt 218 0.0511641398095455 0.0588235294117647 1 17 1 6 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 219 0.0543150594340019 0.279069767441860 12 43 13 15 gaggagaaga 220 0.0559634375819027 2.68965517241379 78 29 81 10 attgtttatg 221 0.0582661874129838 2.76923076923077 72 26 75 9 NM_009030 refGene chr4 128222925 - 97446 graph_last 68 191 actaactgtg 222 0.0585012364745122 Inf 23 0 24 0 ttggaacaat 223 0.0585012364745122 Inf 23 0 24 0 NM_016698 refGene chr5 114291683 - 106212 graph_last l 30 80 aaattggaca 224 0.0586407379811397 0.206896551724138 6 29 6 10 NM_008634 refGene chr13 97870964 + 37324 graph_last 20 91 acttcaatat 225 0.0586407379811397 0.206896551724138 6 29 6 10 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 226 0.0586407379811397 3.78571428571429 53 14 55 5 NM_018858 refGene chr5 116315654 + 106380 graph_last l 120 447 ctcttccccc 227 0.0586407379811397 0.377049180327869 23 61 24 21 gaataataaa 228 0.0586407379811397 1.55882352941176 265 170 277 59 gccgcagtgg 229 0.0586407379811397 0.206896551724138 6 29 6 10 gctataataa 230 0.0586407379811397 6 36 6 38 2 NM_024456 refGene chr11 100379176 - 23873 graph_last l 76 292 taaccaatca 231 0.0586407379811397 6 36 6 38 2 ttttattttg 232 0.0586407379811397 0.206896551724138 6 29 6 10 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 233 0.0603648198193262 Inf 24 0 25 0 acagtgcctg 234 0.064886786846781 10 30 3 31 1 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 235 0.0658935191274932 10.3333333333333 31 3 32 1 gcctgtggtg 236 0.0658935191274932 0.362068965517241 21 58 22 20 gggaagtctg 237 0.0658935191274932 10.3333333333333 31 3 32 1 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 238 0.0658935191274932 10.3333333333333 31 3 32 1 ctagtctttg 239 0.0712596385364922 1.43190661478599 368 257 384 89 gaaactaggt 240 0.0734493876599665 0.192307692307692 5 26 5 9 gcttttgtta 241 0.0734493876599665 0.192307692307692 5 26 5 9 genomic chr10 95618767 + 0 unique_long l 44 105 tattaatatt 242 0.0734493876599665 0.192307692307692 5 26 5 9 atgtcatcaa 243 0.0773775856175554 0.25 8 32 8 11 aaaataaagg 244 0.0845201945605919 5.66666666666667 34 6 36 2 ctgtcatttg 245 0.0845201945605919 5.83333333333333 35 6 37 2 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 246 0.0845201945605919 5.83333333333333 35 6 37 2 NM_017367 refGene chr5 94551679 - 104851 graph_last 131 360 tactgctgat 247 0.0845201945605919 5.83333333333333 35 6 37 2 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 248 0.0852406286172795 Inf 21 0 22 0 NM_007636 refGene chr10 120033751 - 16078 graph_last l 83 199 ggtctaattt 249 0.0852406286172795 Inf 21 0 22 0 NM_010160 refGene chr2 6463548 - 71738 graph_last l 23 80 ttggtgcttc 250 0.0852406286172795 Inf 21 0 22 0 aaaaataaaa 251 0.0854350400525582 Inf 22 0 23 0 ggcctgaggc 252 0.0854350400525582 Inf 22 0 23 0 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 253 0.0854350400525582 Inf 22 0 23 0 NM_008266 refGene chr3 30901904 + 83909 graph_last 81 183 gtaatcctgc 254 0.0854350400525582 Inf 22 0 23 0 gtgagcttgt 255 0.0854350400525582 Inf 22 0 23 0 BY534359 all_est chrX 84532804 + 150025 graph_last 0 72 tgagagaaaa 256 0.0854350400525582 Inf 22 0 23 0 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 257 0.089220532229977 0.173913043478261 4 23 4 8 NM_023122 refGene chrX 154409033 + 152747 graph_last l 28 172 gttggctcct 258 0.089220532229977 0.173913043478261 4 23 4 8 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 259 0.0917326866452704 9.33333333333333 28 3 29 1 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 260 0.0917326866452704 9.66666666666667 29 3 30 1 ttcttgactt 261 0.0917326866452704 9.66666666666667 29 3 30 1 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 262 0.09335630156579 4.44444444444444 40 9 42 3 cgggagatgc 263 0.093762735542774 2.17391304347826 100 46 104 16 NM_008946 refGene chr11 70098721 + 21147 graph_last b 35 205 gaacgcgacg 264 0.0967932581044607 0.241379310344828 7 29 7 10 genomic chr11 68662887 - 0 unique_long l 4 14 aaaactgggg 265 0.100656855850666 0 0 12 0 4 NM_025808 refGene chr16 17130765 + 51924 graph_last l 20 55 aaacggtaag 266 0.100656855850666 0 0 12 0 4 aaattccttt 267 0.100656855850666 0 0 12 0 4 aaccgcgaat 268 0.100656855850666 0 0 12 0 4 aacgcgtgtg 269 0.100656855850666 0 0 12 0 4 NM_194462 refGene chr5 3973741 + 100160 graph_last 0 11 aagccgagat 270 0.100656855850666 0 0 12 0 4 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 271 0.100656855850666 5.66666666666667 34 6 35 2 genomic chr9 44684175 - 0 unique_long l 7 35 aaggagagtt 272 0.100656855850666 0 0 12 0 4 NM_134086 refGene chr15 98545598 + 49712 graph_last l 12 40 aaggatatct 273 0.100656855850666 0 0 12 0 4 NM_013854 refGene chr17 35652435 - 59005 graph_last l 9 26 aaggtggcgt 274 0.100656855850666 0 0 12 0 4 NM_053207 refGene chr8 126716435 - 134382 graph_second 6 13 aagtacagcc 275 0.100656855850666 0 0 12 0 4 NM_177298 refGene chr5 31109648 - 101730 graph_last l 15 38 aatttctcct 276 0.100656855850666 0 0 12 0 4 AB016490 knownGene chr3 92649260 + 86894 graph_last l 23 53 acacagactt 277 0.100656855850666 0 0 12 0 4 NM_130863 refGene chr19_random 15495020 - 71388 graph_last l 31 106 accccttgtg 278 0.100656855850666 0.15 3 20 3 7 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 279 0.100656855850666 0 0 12 0 4 NM_007697 refGene chr6 105396974 + 115725 graph_last l 6 33 agaacaacac 280 0.100656855850666 0 0 12 0 4 NM_025804 refGene chr8 125253642 + 134250 graph_last 2 24 aggggcctag 281 0.100656855850666 0 0 12 0 4 NM_029850 refGene chr5 122246815 - 106834 graph_last l 2 12 aggtatttaa 282 0.100656855850666 0 0 12 0 4 ataggcaaaa 283 0.100656855850666 0 0 12 0 4 atgtagtagt 284 0.100656855850666 3.57142857142857 50 14 52 5 NM_022410 refGene chr15 79105966 + 48274 graph_last l 8 30 atttgactgg 285 0.100656855850666 0 0 12 0 4 attttcatca 286 0.100656855850666 0 0 12 0 4 NM_025382 refGene chr4 133683735 - 98024 graph_last l 3 24 cactgcttcc 287 0.100656855850666 0 0 12 0 4 NM_019978 refGene chr3 56887987 + 85071 graph_last l 4 11 ccaagttggc 288 0.100656855850666 0 0 12 0 4 BY238464 all_est chr2 118967939 + 78313 graph_last l 9 29 ccgagcgagg 289 0.100656855850666 0 0 12 0 4 cgcaacttgg 290 0.100656855850666 0 0 12 0 4 ctagtgttga 291 0.100656855850666 0.15 3 20 3 7 NM_008512 refGene chr10 130814379 - 16708 graph_last l 32 102 ctcagtatcc 292 0.100656855850666 0.15 3 20 3 7 NM_023465 refGene chr4 147658869 + 99296 graph_last l 13 28 ctgaggaaga 293 0.100656855850666 0 0 12 0 4 NM_029570 refGene chr3 36808028 + 84223 graph_last l 7 37 cttcaacctg 294 0.100656855850666 0.15 3 20 3 7 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 295 0.100656855850666 0 0 12 0 4 NM_010311 refGene chr10 77157835 + 13630 graph_last l 10 32 gaactccccg 296 0.100656855850666 0 0 12 0 4 CA316586 all_est chr6 30663917 + 111294 graph_last l 20 85 gactcagtgg 297 0.100656855850666 0.15 3 20 3 7 NM_008989 refGene chr18 36470200 + 63957 graph_last l 10 43 gatctcaagg 298 0.100656855850666 0 0 12 0 4 genomic chr5 134694843 + 0 unique_long l 5 12 gcaagaatag 299 0.100656855850666 0 0 12 0 4 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 300 0.100656855850666 0 0 12 0 4 genomic chr13 81769209 - 0 unique_long l 7 14 gcttagggta 301 0.100656855850666 0 0 12 0 4 gcttccaatc 302 0.100656855850666 0 0 12 0 4 gcttgcccta 303 0.100656855850666 0 0 12 0 4 ggcaaaaagc 304 0.100656855850666 0 0 12 0 4 gggaaactaa 305 0.100656855850666 0 0 12 0 4 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 306 0.100656855850666 3 60 20 63 7 ggtggctcac 307 0.100656855850666 0 0 12 0 4 NM_029031 refGene chr11 72747651 - 21365 graph_last l 8 32 gtgcacgtct 308 0.100656855850666 0 0 12 0 4 NM_139272 refGene chr8 126141377 + 134336 graph_last 3 36 gtggccagtg 309 0.100656855850666 0 0 12 0 4 AI838513 all_est chr1 137208174 - 6402 graph_last l 8 29 gtgtggccct 310 0.100656855850666 0 0 12 0 4 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 311 0.100656855850666 0 0 12 0 4 NM_011130 refGene chr8 21492512 - 128541 graph_last 2 9 tatgaatgtg 312 0.100656855850666 0 0 12 0 4 NM_009320 refGene chr6 93295433 + 115017 graph_last l 16 47 tattttgtgg 313 0.100656855850666 0.15 3 20 3 7 NM_172661 refGene chr2 32506465 + 73413 graph_last l 14 50 tcacaatcct 314 0.100656855850666 0 0 12 0 4 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 315 0.100656855850666 0 0 12 0 4 NM_028207 refGene chr11 101637639 - 24017 graph_second 0 9 tccgtgggtg 316 0.100656855850666 0 0 12 0 4 tctttaatcc 317 0.100656855850666 0.15 3 20 3 7 NM_012010 refGene chrX 83950642 + 149980 graph_last 1 7 tgaaagtggt 318 0.100656855850666 0 0 12 0 4 NM_173419 refGene chr14 53435335 - 41872 graph_last l 6 13 tgattttgag 319 0.100656855850666 0 0 12 0 4 NM_173364 refGene chr9 125235525 - 142346 graph_last l 10 39 tgccagtgac 320 0.100656855850666 0 0 12 0 4 tggatcaagt 321 0.100656855850666 0 0 12 0 4 NM_011026 refGene chr5 121977418 + 106813 graph_second 2 10 tgtgtaatcc 322 0.100656855850666 0 0 12 0 4 NM_146005 refGene chr10 73135380 + 13402 graph_last 36 79 ttcttcagac 323 0.100656855850666 0 0 12 0 4 genomic chr18 70041110 - 0 unique_long l 9 33 ttgtgcttgt 324 0.100656855850666 0 0 12 0 4 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 325 0.100656855850666 0 0 12 0 4 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 326 0.102274636093808 0.4 22 55 23 19 atcctggtaa 327 0.102274636093808 0.365384615384615 19 52 20 18 NM_019410 refGene chr3 59231425 - 85210 graph_last l 161 357 aagcgtgcag 328 0.102301375224926 0.325 13 40 14 14 gagcgttttg 329 0.102301375224926 0.648780487804878 133 205 139 71 tatgtcacct 330 0.102301375224926 0.325 13 40 14 14 aagagaaacc 331 0.103842956441936 0.117647058823529 2 17 2 6 NM_025848 refGene chr9 52633577 - 137561 graph_last l 30 85 aagctcgaaa 332 0.103842956441936 0.117647058823529 2 17 2 6 ccaacactga 333 0.103842956441936 0.230769230769231 6 26 6 9 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 334 0.103842956441936 0.117647058823529 2 17 2 6 ctccctcagg 335 0.103842956441936 0.117647058823529 2 17 2 6 NM_012014 refGene chr13 54519110 - 35074 graph_last l 11 43 gaaaggtcag 336 0.103842956441936 0.117647058823529 2 17 2 6 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 337 0.103842956441936 Inf 20 0 21 0 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 338 0.103842956441936 0.117647058823529 2 17 2 6 tgggttgtgg 339 0.103842956441936 0.230769230769231 6 26 6 9 aatgagacaa 340 0.105587293938040 0.0714285714285714 1 14 1 5 aggaaatgag 341 0.105587293938040 0.0714285714285714 1 14 1 5 BC059845 all_mrna chr4_random 163545 + 99872 graph_last 59 175 agggccactg 342 0.105587293938040 0.384615384615385 20 52 21 18 NM_177614 refGene chr10 130368387 - 16662 graph_last l 11 55 agggtgagga 343 0.105587293938040 0.0714285714285714 1 14 1 5 NM_025282 refGene chr13 81768319 + 36483 graph_last l 3 17 atcacattat 344 0.105587293938040 0.0714285714285714 1 14 1 5 atctgacgcc 345 0.105587293938040 0.0714285714285714 1 14 1 5 caaggtgaca 346 0.105587293938040 0.597222222222222 86 144 90 50 cagaggaagg 347 0.105587293938040 0.0714285714285714 1 14 1 5 NM_029787 refGene chr15 84806195 - 48854 graph_last l 2 40 cagtcttgag 348 0.105587293938040 0.0714285714285714 1 14 1 5 catacctgaa 349 0.105587293938040 4.33333333333333 39 9 41 3 ccaagaatct 350 0.105587293938040 0.0714285714285714 1 14 1 5 ccctgacttc 351 0.105587293938040 0.0714285714285714 1 14 1 5 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 352 0.105587293938040 0.0714285714285714 1 14 1 5 NM_198886 refGene chr17 34557187 + 58892 graph_last 1 33 cctcaaagag 353 0.105587293938040 0.0714285714285714 1 14 1 5 NM_010906 refGene chr8 85570306 - 131845 graph_last l 14 48 cgcctctctc 354 0.105587293938040 0.0714285714285714 1 14 1 5 NM_019827 refGene chr16 38048116 + 53446 graph_last l 18 74 ctcggattca 355 0.105587293938040 0.0714285714285714 1 14 1 5 genomic chr19_random 15495638 + 0 unique_long l 1 7 gaggggcaag 356 0.105587293938040 0.0714285714285714 1 14 1 5 NM_146072 refGene chr16 89234221 - 55766 graph_last 2 10 gatagaggga 357 0.105587293938040 0.0714285714285714 1 14 1 5 NM_009980 refGene chr7 124868336 - 125551 graph_last l 7 35 gctctaccag 358 0.105587293938040 0.0714285714285714 1 14 1 5 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 359 0.105587293938040 0.0714285714285714 1 14 1 5 NM_126165 refGene chr8 108577067 + 133146 graph_last l 42 86 taggacactt 360 0.105587293938040 0.0714285714285714 1 14 1 5 tcaactttca 361 0.105587293938040 0.0714285714285714 1 14 1 5 NM_027324 refGene chr13 53858187 + 35020 graph_last l 16 48 tctgtgacaa 362 0.105587293938040 0.0714285714285714 1 14 1 5 tgaaaatgta 363 0.105587293938040 0.0714285714285714 1 14 1 5 NM_016703 refGene chr5 29292420 - 101545 graph_last l 15 40 tgaagatgcc 364 0.105587293938040 0.0714285714285714 1 14 1 5 genomic chr6 42782014 - 0 unique_long l 17 52 ttgaaagtgc 365 0.105587293938040 0.0714285714285714 1 14 1 5 NM_175229 refGene chr17 23399125 + 57745 graph_last l 32 111 ttgctggaaa 366 0.105587293938040 0.0714285714285714 1 14 1 5 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 367 0.105587293938040 2.9 58 20 61 7 tacaacactc 368 0.106511410761979 0.285714285714286 10 35 10 12 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 369 0.106659866392891 3.42857142857143 48 14 50 5 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 370 0.106740830554005 2.175 87 40 91 14 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 371 0.120446207073989 1.91379310344828 111 58 116 20 NM_019431 refGene chr11 107397888 - 24662 graph_second l 9 66 tggcctttga 372 0.120446207073989 0.275862068965517 8 29 8 10 atctttctgg 373 0.123446417503891 0.217391304347826 5 23 5 8 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 374 0.123446417503891 0.217391304347826 5 23 5 8 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 375 0.123446417503891 0.217391304347826 5 23 5 8 NM_172948 refGene chr11 116492226 + 25261 graph_last l 15 54 ccctcctcca 376 0.123446417503891 0.217391304347826 5 23 5 8 cgctggttcc 377 0.123446417503891 2.09302325581395 90 43 94 15 taaaagaaaa 378 0.123446417503891 2.53846153846154 66 26 69 9 NM_010151 refGene chr13 76260992 - 36347 graph_last l 16 69 tccatccagt 379 0.123446417503891 0.217391304347826 5 23 5 8 NM_028601 refGene chr11 6303680 + 17481 graph_last l 21 115 tggtgtctgc 380 0.123446417503891 0.217391304347826 5 23 5 8 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 381 0.123699120365471 2.11627906976744 91 43 95 15 gctttgaatg 382 0.128462989748288 2 98 49 102 17 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 383 0.12851727265892 5.5 33 6 34 2 taagggaaat 384 0.138576522534284 4 36 9 38 3 NM_023735 refGene chr1 128078440 - 5827 graph_last l 56 214 aagaaaaagt 385 0.141649522166418 4.11111111111111 37 9 39 3 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 386 0.141649522166418 4.11111111111111 37 9 39 3 aagaaaaaaa 387 0.142451820878064 Inf 18 0 19 0 NM_007379 refGene chr2 25714940 + 72843 graph_last l 17 177 ggagcaggac 388 0.142451820878064 Inf 18 0 19 0 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 389 0.142451820878064 3.05882352941176 52 17 54 6 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 390 0.142451820878064 Inf 18 0 19 0 NM_007421 refGene chr12 108213627 - 31438 graph_last 2 76 taaaattgtt 391 0.142451820878064 Inf 18 0 19 0 NM_007881 refGene chr6 126661781 - 116898 graph_last l 106 385 ggcctgcttc 392 0.143383539463916 3.28571428571429 46 14 48 5 atggcttaat 393 0.144357397490359 8.33333333333333 25 3 26 1 gtcagttaaa 394 0.144357397490359 8.33333333333333 25 3 26 1 NM_008098 refGene chr6 35450366 - 111690 graph_last l 127 284 tacatccgaa 395 0.144357397490359 3.5 42 12 44 4 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 396 0.144357397490359 3.35714285714286 47 14 49 5 agtggtcaag 397 0.150412132428870 Inf 19 0 20 0 attaagaggg 398 0.150412132428870 Inf 19 0 20 0 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 399 0.150412132428870 Inf 19 0 20 0 tagacgtact 400 0.150412132428870 Inf 19 0 20 0 NM_021539 refGene chr5 116409924 + 106398 graph_last l 42 141 ggatgtaccc 401 0.153518409958742 0.269230769230769 7 26 7 9 NM_009238 refGene chr13 28839679 - 33570 graph_last l 6 39 tccctgggca 402 0.153518409958742 0.269230769230769 7 26 7 9 tcttctaatc 403 0.153518409958742 0.269230769230769 7 26 7 9 NM_011241 refGene chr15 83217970 - 48702 graph_last 71 146 ttgggcctac 404 0.155686404610342 0.2 4 20 4 7 tctaccccat 405 0.169449249188232 0.35 14 40 15 14 taaatcaact 406 0.175483871415484 5 30 6 31 2 gaaaatatcc 407 0.177805222515460 5.16666666666667 31 6 32 2 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 408 0.177805222515460 5.16666666666667 31 6 32 2 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 409 0.177805222515460 5.16666666666667 31 6 32 2 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 410 0.179920852053095 0.3125 10 32 10 11 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 411 0.19308118727977 3.88888888888889 35 9 37 3 NM_021284 refGene chr6 146776526 - 118055 graph_last l 16 71 aaccgtactg 412 0.197103218358053 0.176470588235294 3 17 3 6 NM_008538 refGene chr10 38262715 + 11621 graph_last 0 25 ctggcttctt 413 0.197103218358053 0.176470588235294 3 17 3 6 gatgtggctg 414 0.197103218358053 1.80303030303030 119 66 124 23 gtggtgcaca 415 0.197103218358053 0.176470588235294 3 17 3 6 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 416 0.197103218358053 0.176470588235294 3 17 3 6 NM_020252 refGene chr17 90850761 - 62103 graph_last l 25 76 taatgtgttg 417 0.197103218358053 0.176470588235294 3 17 3 6 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 418 0.197103218358053 0.72202166064982 200 277 209 96 NM_011352 refGene chr9 60247794 + 138104 graph_last l 7 42 tcctaactta 419 0.197103218358053 0.176470588235294 3 17 3 6 NM_016843 refGene chr15 87130916 + 49033 graph_last l 13 32 tgaacggggc 420 0.197103218358053 0.176470588235294 3 17 3 6 NM_011492 refGene chr10 82440175 - 14048 graph_last l 37 175 tgcacaggct 421 0.197103218358053 0.176470588235294 3 17 3 6 AK129145 knownGene chr4 150502502 + 99571 graph_last l 14 84 tgggctgctg 422 0.197103218358053 0.176470588235294 3 17 3 6 NM_025407 refGene chr9 111570399 + 141448 graph_last l 67 280 ttctggctgc 423 0.197103218358053 0.176470588235294 3 17 3 6 tcctcttccc 424 0.199180347164637 0.375 15 40 16 14 cctttagtcc 425 0.200067432592101 0.260869565217391 6 23 6 8 gggtaggggt 426 0.200067432592101 0.260869565217391 6 23 6 8 gttgctgttt 427 0.200067432592101 0.260869565217391 6 23 6 8 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 428 0.200067432592101 2.14285714285714 75 35 78 12 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 429 0.201787564967065 0.448275862068966 26 58 27 20 aaaaacaaaa 430 0.205239372351226 Inf 17 0 18 0 BC009091 knownGene chr19_random 7285586 - 71199 graph_last 1 5 aaaaagactc 431 0.205239372351226 0 0 9 0 3 NM_009197 refGene chrX 93603418 - 150551 graph_last 2 14 aaacacagga 432 0.205239372351226 0.0833333333333333 1 12 1 4 NM_017368 refGene chr2 91631056 + 76800 graph_last l 6 28 aaacatacac 433 0.205239372351226 0.142857142857143 2 14 2 5 NM_009059 refGene chr17 33557822 + 58793 graph_last 1 23 aaagtgggtg 434 0.205239372351226 0 0 9 0 3 BX514180 all_est chr10 44079063 - 11989 graph_last 0 3 aaatttaaag 435 0.205239372351226 0 0 9 0 3 NM_010238 refGene chr17 33754051 - 58821 graph_last l 10 48 aacaactggc 436 0.205239372351226 0 0 9 0 3 aacaggttca 437 0.205239372351226 2 80 40 84 14 aacccagagc 438 0.205239372351226 0 0 9 0 3 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 439 0.205239372351226 0 0 9 0 3 aacttcttgt 440 0.205239372351226 0.25 5 20 5 7 NM_011129 refGene chr11 87149368 + 22798 graph_second 3 12 aaggccctgc 441 0.205239372351226 0 0 9 0 3 NM_023122 refGene chrX 154411423 - 152747 graph_last l 2 8 aatatacata 442 0.205239372351226 0.0833333333333333 1 12 1 4 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 443 0.205239372351226 0.61864406779661 73 118 76 41 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 444 0.205239372351226 0 0 9 0 3 aatttcttgg 445 0.205239372351226 0 0 9 0 3 acaacaataa 446 0.205239372351226 0 0 9 0 3 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 447 0.205239372351226 2.08571428571429 73 35 76 12 NM_016715 refGene chr5 108522692 + 105718 graph_last 3 30 accctgtgac 448 0.205239372351226 0 0 9 0 3 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 449 0.205239372351226 0.0833333333333333 1 12 1 4 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 450 0.205239372351226 0 0 9 0 3 NM_177681 refGene chr5 142074881 + 108282 graph_last 0 15 acgacagaag 451 0.205239372351226 0.142857142857143 2 14 2 5 actctagcca 452 0.205239372351226 0.0833333333333333 1 12 1 4 actgcagatg 453 0.205239372351226 0.0833333333333333 1 12 1 4 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 454 0.205239372351226 0 0 9 0 3 actgtcagtt 455 0.205239372351226 0 0 9 0 3 genomic chr17 28803936 - 0 unique_long l 9 26 acttcattgg 456 0.205239372351226 0 0 9 0 3 BU522569 all_est chr11 68970314 + 21015 graph_last l 12 33 agagcccggc 457 0.205239372351226 0 0 9 0 3 NM_011588 refGene chr7 10287113 - 118856 graph_last l 64 160 agaggtggtt 458 0.205239372351226 0.25 5 20 5 7 AK078964 knownGene chr18 69900496 + 65810 graph_second 0 45 agcaaatcca 459 0.205239372351226 0 0 9 0 3 NM_008165 refGene chr11 56925522 + 20133 graph_last l 9 93 agccacagtt 460 0.205239372351226 0.0833333333333333 1 12 1 4 NM_011406 refGene chr17 82092536 - 61525 graph_last l 4 18 agccagaagc 461 0.205239372351226 0.0833333333333333 1 12 1 4 agcttgcctt 462 0.205239372351226 0 0 9 0 3 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 463 0.205239372351226 0 0 9 0 3 aggaaggcgg 464 0.205239372351226 1.78125 114 64 119 22 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 465 0.205239372351226 Inf 17 0 18 0 AK051233 all_mrna chr14 16044346 + 39487 graph_last 0 26 aggcagaggc 466 0.205239372351226 0 0 9 0 3 aggccaagaa 467 0.205239372351226 0.25 5 20 5 7 NM_175930 refGene chr12 113764797 + 31667 graph_last l 10 25 agggagggtg 468 0.205239372351226 0 0 9 0 3 aggttggccg 469 0.205239372351226 0 0 9 0 3 agttcaaggc 470 0.205239372351226 0 0 9 0 3 AI854083 all_est chr6 36936378 - 111753 graph_last l 2 10 ataagcttga 471 0.205239372351226 0 0 9 0 3 ataattctac 472 0.205239372351226 0 0 9 0 3 NM_025333 refGene chr19 10425016 - 68003 graph_last l 5 15 atcaaaaagc 473 0.205239372351226 0 0 9 0 3 atgagaatgg 474 0.205239372351226 0.0833333333333333 1 12 1 4 NM_010223 refGene chr8 70775594 + 130947 graph_last 0 93 atgccccgcg 475 0.205239372351226 0 0 9 0 3 genomic chr4 153978639 - 0 unique_long l 3 7 attgggtata 476 0.205239372351226 0 0 9 0 3 attgtcattg 477 0.205239372351226 0.0833333333333333 1 12 1 4 NM_145553 refGene chr4 131785171 + 97804 graph_last 0 20 atttaaaaaa 478 0.205239372351226 0 0 9 0 3 caaaatacat 479 0.205239372351226 2.47826086956522 57 23 60 8 NM_020575 refGene chr2 60514790 + 74964 graph_last 3 20 caaatgaaca 480 0.205239372351226 0 0 9 0 3 genomic chr6 32020922 - 0 unique_long l 9 23 caagcttacc 481 0.205239372351226 0 0 9 0 3 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 482 0.205239372351226 8 24 3 25 1 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 483 0.205239372351226 Inf 16 0 17 0 cactcctaag 484 0.205239372351226 0 0 9 0 3 NM_144871 refGene chr19 3622286 + 67325 graph_last l 24 69 cacttgcagt 485 0.205239372351226 Inf 16 0 17 0 cagcaatctc 486 0.205239372351226 0 0 9 0 3 cagcttctgc 487 0.205239372351226 0 0 9 0 3 genomic chr12 95770479 - 0 unique_long l 21 70 caggattcct 488 0.205239372351226 0.142857142857143 2 14 2 5 caggcccttg 489 0.205239372351226 0.142857142857143 2 14 2 5 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 490 0.205239372351226 0 0 9 0 3 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 491 0.205239372351226 0.0833333333333333 1 12 1 4 NM_013662 refGene chr17 56051344 - 60197 graph_last l 18 51 ccacgtggcc 492 0.205239372351226 0 0 9 0 3 cccacaaagg 493 0.205239372351226 0 0 9 0 3 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 494 0.205239372351226 0.142857142857143 2 14 2 5 NM_145556 refGene chr4 146738309 + 99182 graph_last 0 5 cccctggaaa 495 0.205239372351226 0 0 9 0 3 NM_024427 refGene chr9 69500644 - 138896 graph_last 1 57 cccgtagccc 496 0.205239372351226 0.142857142857143 2 14 2 5 AK051528 all_mrna chr11 116477631 + 25266 graph_last 1 7 cccgtgaggc 497 0.205239372351226 0 0 9 0 3 ccctcctcag 498 0.205239372351226 0 0 9 0 3 cctcactgga 499 0.205239372351226 0 0 9 0 3 cctcggaaaa 500 0.205239372351226 0.5 32 64 33 22 AK016936 knownGene chr6 124387762 + 116782 graph_last 0 12 cctggactga 501 0.205239372351226 0 0 9 0 3 cctgtattcc 502 0.205239372351226 0 0 9 0 3 cctgtctccc 503 0.205239372351226 0 0 9 0 3 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 504 0.205239372351226 0.34375 11 32 11 11 NM_025285 refGene chr3 8633103 + 82940 graph_second 1 9 cgatatcagt 505 0.205239372351226 0 0 9 0 3 NM_011308 refGene chr11 61889224 - 20613 graph_last 7 31 cgccccatct 506 0.205239372351226 0.0833333333333333 1 12 1 4 NM_175012 refGene chr18 66101013 + 65570 graph_last b 6 16 cgcggctcgg 507 0.205239372351226 0.0833333333333333 1 12 1 4 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 508 0.205239372351226 Inf 16 0 17 0 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 509 0.205239372351226 0 0 9 0 3 NM_026856 refGene chr5 105774526 - 105522 graph_last l 3 15 ctaagaaccg 510 0.205239372351226 0 0 9 0 3 genomic chr12 83328225 + 0 unique_long l 3 12 ctcagtccat 511 0.205239372351226 0 0 9 0 3 NM_028194 refGene chr5 72743176 - 103784 graph_last l 6 13 ctctgagaag 512 0.205239372351226 0 0 9 0 3 genomic chr3 125974948 - 0 unique_long l 2 6 ctgaaatcca 513 0.205239372351226 0 0 9 0 3 NM_178645 refGene chr11 76558320 + 21779 graph_last l 23 70 ctgcctcaca 514 0.205239372351226 0.142857142857143 2 14 2 5 BC051520 all_mrna chr2_random 6368419 + 82674 graph_last 0 15 ctgcctgcag 515 0.205239372351226 0 0 9 0 3 ctgctttctg 516 0.205239372351226 0 0 9 0 3 NM_008997 refGene chr17 33385280 - 58766 graph_last 20 98 ctggtgggca 517 0.205239372351226 0.142857142857143 2 14 2 5 NM_173400 refGene chr4 85304442 - 94706 graph_last 1 10 ctgttaagtg 518 0.205239372351226 0 0 9 0 3 cttaggcagc 519 0.205239372351226 0 0 9 0 3 gaaatgataa 520 0.205239372351226 0 0 9 0 3 AA073739 all_est chr19 8897935 + 67877 graph_last l 10 47 gaagccagcc 521 0.205239372351226 0 0 9 0 3 NM_029364 refGene chr10 124410646 + 16399 graph_last l 12 39 gaatgcaggg 522 0.205239372351226 0 0 9 0 3 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 523 0.205239372351226 0.640287769784173 89 139 93 48 AK090227 all_mrna chrX 132132840 - 151845 graph_last 2 10 gagattagtc 524 0.205239372351226 0.0833333333333333 1 12 1 4 NM_029555 refGene chr6 42357963 + 112149 graph_second 0 12 gagcaaccag 525 0.205239372351226 0 0 9 0 3 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 526 0.205239372351226 7.66666666666667 23 3 24 1 gagctgcaga 527 0.205239372351226 0 0 9 0 3 NM_011186 refGene chr14 45704939 - 41303 graph_second 0 7 gagtcattgt 528 0.205239372351226 0 0 9 0 3 NM_133236 refGene chr6 8320530 + 110253 graph_last 14 29 gagtgacaaa 529 0.205239372351226 0 0 9 0 3 gagtttagag 530 0.205239372351226 0 0 9 0 3 gatgaacccc 531 0.205239372351226 0 0 9 0 3 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 532 0.205239372351226 0 0 9 0 3 NM_025739 refGene chr4 116180039 - 96508 graph_last 62 192 gattaaaaca 533 0.205239372351226 4.66666666666667 28 6 29 2 NM_028259 refGene chr11 86062939 - 22667 graph_last 0 9 gattttaaaa 534 0.205239372351226 0 0 9 0 3 NM_019796 refGene chr9 91413676 - 140127 graph_last 14 65 gcaaacaatc 535 0.205239372351226 Inf 16 0 17 0 gccaaggcct 536 0.205239372351226 0.142857142857143 2 14 2 5 NM_178699 refGene chr4 153809550 + 99794 graph_last l 6 29 gccagaggct 537 0.205239372351226 0 0 9 0 3 NM_018763 refGene chr9 97829313 - 140418 graph_last l 27 73 gccgtgctgg 538 0.205239372351226 0.0833333333333333 1 12 1 4 AK009092 knownGene chr5 99751450 - 105140 graph_last 29 80 gccgtgtgct 539 0.205239372351226 0.142857142857143 2 14 2 5 NM_153413 refGene chr9 109513400 + 141212 graph_last 2 11 gcctgagcac 540 0.205239372351226 0 0 9 0 3 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 541 0.205239372351226 1.69230769230769 132 78 138 27 gcgacgcggg 542 0.205239372351226 0.0833333333333333 1 12 1 4 genomic chr8 55036394 - 0 unique_long l 4 11 gctacctttc 543 0.205239372351226 0.0833333333333333 1 12 1 4 NM_009308 refGene chr18 31773653 + 63593 graph_last l 23 112 gctacttaag 544 0.205239372351226 8 24 3 25 1 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 545 0.205239372351226 4.66666666666667 28 6 29 2 AA896727 all_est chr3 54020885 + 84913 graph_last 1 31 gctccaagga 546 0.205239372351226 0 0 9 0 3 gctccctcat 547 0.205239372351226 0.0833333333333333 1 12 1 4 gctccctctg 548 0.205239372351226 3.07142857142857 43 14 45 5 NM_026481 refGene chr8 106976878 - 132961 graph_last l 26 72 gctgactctt 549 0.205239372351226 0.0833333333333333 1 12 1 4 gctgcctcca 550 0.205239372351226 0 0 9 0 3 gctgggaggt 551 0.205239372351226 0 0 9 0 3 gctgtcacct 552 0.205239372351226 0 0 9 0 3 NM_144942 refGene chr15 103584191 - 50177 graph_last l 6 35 gcttgacata 553 0.205239372351226 0.142857142857143 2 14 2 5 gcttgccctc 554 0.205239372351226 0 0 9 0 3 NM_024439 refGene chr7 58524814 + 121731 graph_last l 35 65 gcttttatgg 555 0.205239372351226 0 0 9 0 3 gcttttggag 556 0.205239372351226 0 0 9 0 3 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 557 0.205239372351226 0.0833333333333333 1 12 1 4 NM_033509 refGene chr1 175860516 - 8514 graph_last 4 19 ggaatggtct 558 0.205239372351226 0.0833333333333333 1 12 1 4 NM_008608 refGene chr14 45531325 + 41281 graph_last l 2 20 ggacgcccaa 559 0.205239372351226 0 0 9 0 3 ggagagctgt 560 0.205239372351226 0 0 9 0 3 NM_016680 refGene chr7 16538177 + 119318 graph_last 1 11 ggaggcaggg 561 0.205239372351226 0 0 9 0 3 ggaggtgtct 562 0.205239372351226 0 0 9 0 3 NM_008323 refGene chrX 63381310 - 149194 graph_second 0 21 ggcaacagga 563 0.205239372351226 0 0 9 0 3 NM_198013 refGene chr11 87771670 + 22857 graph_last l 22 44 ggcacacagc 564 0.205239372351226 0 0 9 0 3 BM936517 all_est chr18 32418272 + 63652 graph_last 2 11 ggcagacagt 565 0.205239372351226 0 0 9 0 3 NM_011520 refGene chr4 129500658 + 97598 graph_last b 57 223 ggcgctcgta 566 0.205239372351226 0.342105263157895 13 38 14 13 ggctgcccta 567 0.205239372351226 0 0 9 0 3 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 568 0.205239372351226 3.77777777777778 34 9 35 3 gggacctagg 569 0.205239372351226 0.482758620689655 28 58 29 20 gggattggtg 570 0.205239372351226 0 0 9 0 3 AK017507 knownGene chr4 21817716 + 91710 graph_last l 11 45 gggctgcttt 571 0.205239372351226 0 0 9 0 3 NM_010460 refGene chr11 95903970 + 23381 graph_last 0 19 ggggggtggg 572 0.205239372351226 0 0 9 0 3 NM_153550 refGene chr16 35427449 + 53240 graph_second 0 15 ggttctcagt 573 0.205239372351226 0.0833333333333333 1 12 1 4 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 574 0.205239372351226 0 0 9 0 3 NM_153150 refGene chr16 17530303 - 51984 graph_last l 5 28 gtcaggtcac 575 0.205239372351226 0.0833333333333333 1 12 1 4 NM_018770 refGene chr9 49857439 - 137345 graph_last l 17 44 gtccttgtac 576 0.205239372351226 0.142857142857143 2 14 2 5 NM_023328 refGene chr13 59235377 - 35436 graph_last l 4 15 gtgaaaattg 577 0.205239372351226 0 0 9 0 3 NM_028950 refGene chr2 14998028 - 72176 graph_last 0 6 gtgaagtcag 578 0.205239372351226 0 0 9 0 3 gtgacctggc 579 0.205239372351226 0.0833333333333333 1 12 1 4 gtgactttgc 580 0.205239372351226 Inf 16 0 17 0 gtgagacaca 581 0.205239372351226 0 0 9 0 3 AK077185 knownGene chr12 47193284 - 27751 graph_last l 6 30 gtgcaaatcc 582 0.205239372351226 0 0 9 0 3 gtggagcaca 583 0.205239372351226 0.0833333333333333 1 12 1 4 NM_008748 refGene chr7 134139181 - 126141 graph_last l 18 102 gtggaggggc 584 0.205239372351226 0.142857142857143 2 14 2 5 NM_145596 refGene chr8 70109811 + 130866 graph_last 0 5 gtggcacact 585 0.205239372351226 0 0 9 0 3 gtggcttaca 586 0.205239372351226 Inf 17 0 18 0 BC059902 knownGene chr9 112986201 - 141560 graph_last l 5 29 gtgtgcctcc 587 0.205239372351226 0 0 9 0 3 gtgttaacca 588 0.205239372351226 0.523809523809524 44 84 46 29 NM_025647 refGene chr4 113869312 - 96275 graph_last 38 114 gttacttgtt 589 0.205239372351226 Inf 17 0 18 0 NM_028835 refGene chr6 116487900 - 116215 graph_last l 3 25 gtttgcctga 590 0.205239372351226 0.0833333333333333 1 12 1 4 genomic chr9 97828473 - 0 unique_both b 10 18 taaagcgttg 591 0.205239372351226 0 0 9 0 3 NM_144811 refGene chr15 81177041 + 48470 graph_last 0 7 taataaagaa 592 0.205239372351226 0 0 9 0 3 taatatttaa 593 0.205239372351226 0.0833333333333333 1 12 1 4 NM_152895 refGene chr1 137538600 + 6443 graph_last 2 24 taattcagga 594 0.205239372351226 0.0833333333333333 1 12 1 4 NM_025303 refGene chr1 16611261 - 594 graph_last 7 28 tacaatcaga 595 0.205239372351226 0.0833333333333333 1 12 1 4 AK081003 knownGene chr13 87441680 + 36626 graph_last l 80 200 taggatgttg 596 0.205239372351226 Inf 16 0 17 0 tatacctgta 597 0.205239372351226 0 0 9 0 3 NM_010022 refGene chr3 119882053 + 88622 graph_last l 11 18 tatctgtata 598 0.205239372351226 0 0 9 0 3 NM_021477 refGene chr16 6895625 + 51276 graph_last l 42 94 tcagaggtgt 599 0.205239372351226 0.0833333333333333 1 12 1 4 tcagccccac 600 0.205239372351226 0.0833333333333333 1 12 1 4 NM_011751 refGene chr11 79975236 + 22170 graph_last l 8 27 tcatattcca 601 0.205239372351226 0.0833333333333333 1 12 1 4 tccagacctg 602 0.205239372351226 0.0833333333333333 1 12 1 4 tccggcttgt 603 0.205239372351226 Inf 17 0 18 0 tccgtgggtt 604 0.205239372351226 0 0 9 0 3 tcctcacggg 605 0.205239372351226 Inf 17 0 18 0 NM_011785 refGene chr1 180948039 + 8786 graph_last 0 3 tctaccttta 606 0.205239372351226 0 0 9 0 3 NM_010404 refGene chr11 99931508 - 23830 graph_last l 9 50 tctgccagaa 607 0.205239372351226 0 0 9 0 3 tctgcttgga 608 0.205239372351226 0.0833333333333333 1 12 1 4 NM_053073 refGene chr4 106735012 + 95875 graph_last l 8 27 tcttagtaac 609 0.205239372351226 0.0833333333333333 1 12 1 4 AK085367 knownGene chr8 119157008 - 133821 graph_last l 14 28 tcttagttct 610 0.205239372351226 0.0833333333333333 1 12 1 4 CK346937 all_est chr6 135531640 - 117451 graph_last 0 10 tcttcttaac 611 0.205239372351226 0 0 9 0 3 NM_144530 refGene chr1 136503213 - 6343 graph_last 6 26 tgaagacact 612 0.205239372351226 0 0 9 0 3 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 613 0.205239372351226 Inf 16 0 17 0 tgccttgtcc 614 0.205239372351226 0.0833333333333333 1 12 1 4 tgcctttaat 615 0.205239372351226 0 0 9 0 3 tgcttatacc 616 0.205239372351226 0 0 9 0 3 tggcaagcta 617 0.205239372351226 0 0 9 0 3 NM_025959 refGene chr14 37093216 + 40740 graph_last l 11 32 tggcaatcaa 618 0.205239372351226 0 0 9 0 3 tgggctcctc 619 0.205239372351226 0 0 9 0 3 tggtggaatg 620 0.205239372351226 0.0833333333333333 1 12 1 4 NM_175328 refGene chr10 105944432 + 15398 graph_last l 7 22 tggttggctg 621 0.205239372351226 0 0 9 0 3 NM_024457 refGene chr10 120856422 - 16149 graph_last 28 67 tgtaactggt 622 0.205239372351226 0 0 9 0 3 tgtatttata 623 0.205239372351226 8 24 3 25 1 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 624 0.205239372351226 0.0833333333333333 1 12 1 4 tgttaagaag 625 0.205239372351226 0.25 5 20 5 7 tgttacgtat 626 0.205239372351226 0.0833333333333333 1 12 1 4 tgttatgaga 627 0.205239372351226 0.142857142857143 2 14 2 5 NM_178878 refGene chr5 28251467 - 101461 graph_last l 7 51 ttaaggggga 628 0.205239372351226 0 0 9 0 3 NM_017469 refGene chr3 83866801 - 86251 graph_last l 59 125 ttaattgtgt 629 0.205239372351226 0.25 5 20 5 7 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 630 0.205239372351226 1.50806451612903 187 124 195 43 S76838 knownGene chr8 13715222 - 128080 graph_last 2 9 ttcagcagcg 631 0.205239372351226 0 0 9 0 3 ttcagctcga 632 0.205239372351226 0.554347826086957 51 92 53 32 NM_009395 refGene chr11 78096024 - 21956 graph_last l 9 26 ttctaggcta 633 0.205239372351226 0 0 9 0 3 ttctgggtag 634 0.205239372351226 0.34375 11 32 11 11 ttctggtttg 635 0.205239372351226 0 0 9 0 3 BE993913 all_est chrX 84016517 - 149990 graph_second 1 1 ttgaatagat 636 0.205239372351226 0 0 9 0 3 BC048905 knownGene chr2 70026233 + 75473 graph_last 8 30 ttgtttttgg 637 0.205239372351226 0 0 9 0 3 tttagtttta 638 0.205239372351226 0 0 9 0 3 tttgaaactg 639 0.205239372351226 0 0 9 0 3 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 640 0.205239372351226 0.0833333333333333 1 12 1 4 tttttatatt 641 0.205239372351226 0.0833333333333333 1 12 1 4 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 642 0.214760189729857 7.33333333333333 22 3 23 1 NM_019685 refGene chr6 89947633 + 114790 graph_last l 44 104 gtggtttgga 643 0.214760189729857 7.33333333333333 22 3 23 1 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 644 0.214760189729857 7.33333333333333 22 3 23 1 NM_011968 refGene chr12 50762699 + 28033 graph_last l 37 125 cctgtctact 645 0.221069768284342 0.344827586206897 10 29 10 10 NM_026023 refGene chr11 40360087 + 19152 graph_last 2 83 gaaaaatatt 646 0.222489011892338 0.304347826086957 7 23 7 8 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 647 0.222489011892338 0.304347826086957 7 23 7 8 NM_022420 refGene chr7 111043611 + 124660 graph_last l 13 96 ctgagtttga 648 0.226894100820385 Inf 15 0 16 0 cttacatttc 649 0.226894100820385 Inf 15 0 16 0 gaaaatgaga 650 0.226894100820385 Inf 15 0 16 0 gatgacttgc 651 0.226894100820385 Inf 15 0 16 0 gcaaaaaaaa 652 0.226894100820385 Inf 15 0 16 0 ggctttggtc 653 0.226894100820385 Inf 15 0 16 0 NM_173784 refGene chr11 32416958 + 18750 graph_last l 10 58 gtgctggtaa 654 0.226894100820385 Inf 15 0 16 0 tccctgactt 655 0.226894100820385 Inf 15 0 16 0 NM_019710 refGene chrX 139759704 + 152140 graph_last l 15 68 ttagattgtt 656 0.226894100820385 Inf 15 0 16 0 NM_021345 refGene chr9 67379153 - 138637 graph_last l 60 153 ttctagttgc 657 0.226894100820385 Inf 15 0 16 0 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 658 0.227379643207354 0.342857142857143 12 35 13 12 ttcattattg 659 0.227379643207354 2.70588235294118 46 17 48 6 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 660 0.227379643207354 0.342857142857143 12 35 13 12 cctcctccag 661 0.230373828906142 0.394736842105263 15 38 16 13 NM_054072 refGene chr18 37958141 + 64094 graph_last l 118 278 tctggagaca 662 0.230373828906142 0.394736842105263 15 38 16 13 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 663 0.235707367347387 2.23076923076923 58 26 61 9 gactatatat 664 0.241190636483655 4.5 27 6 28 2 NM_146251 refGene chr2 25329142 + 72787 graph_last l 20 115 actcccttca 665 0.243545300506443 0.235294117647059 4 17 4 6 genomic chr15 80765184 - 0 unique_long l 14 54 agactccaca 666 0.243545300506443 0.235294117647059 4 17 4 6 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 667 0.243545300506443 3 42 14 44 5 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 668 0.243545300506443 0.235294117647059 4 17 4 6 NM_178060 refGene chr11 98348447 + 23676 graph_last l 25 69 ccatcttgac 669 0.243545300506443 0.235294117647059 4 17 4 6 NM_007422 refGene chr1 181698653 - 8873 graph_last l 15 50 ccctcatccc 670 0.243545300506443 0.235294117647059 4 17 4 6 gaactgcagg 671 0.243545300506443 0.235294117647059 4 17 4 6 gatttcccag 672 0.243545300506443 0.235294117647059 4 17 4 6 NM_025363 refGene chr6 38635518 + 111893 graph_last l 23 88 gcaagggtga 673 0.243545300506443 0.235294117647059 4 17 4 6 ggacagatgt 674 0.243545300506443 0.235294117647059 4 17 4 6 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 675 0.243545300506443 0.235294117647059 4 17 4 6 NM_026775 refGene chr12 81330718 - 29849 graph_last l 12 58 tgggatttat 676 0.243545300506443 0.235294117647059 4 17 4 6 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 677 0.243545300506443 0.235294117647059 4 17 4 6 caataaactg 678 0.244697769521374 3 36 12 38 4 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 679 0.246246598300637 3.55555555555556 32 9 33 3 ctatttcaaa 680 0.246246598300637 3.55555555555556 32 9 33 3 NM_024218 refGene chr16 56401884 + 54408 graph_last 37 280 aaggtcgagc 681 0.246314622996213 0.307692307692308 8 26 8 9 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 682 0.246314622996213 0.307692307692308 8 26 8 9 NM_007874 refGene chr18 34562364 - 63762 graph_last l 6 73 ctagggacag 683 0.246314622996213 0.307692307692308 8 26 8 9 tgtgaatgat 684 0.250581532805309 3.08333333333333 37 12 39 4 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 685 0.250581532805309 3.08333333333333 37 12 39 4 tgtgtgaggt 686 0.255224687045705 1.88372093023256 81 43 85 15 attacggtgg 687 0.270562942211980 0.480769230769231 25 52 26 18 gtcacaccac 688 0.278981138311347 0.379310344827586 11 29 11 10 NM_027360 refGene chr12 107529636 - 31397 graph_last 192 512 gaacatcact 689 0.2806751458182 2.5 50 20 52 7 NM_007988 refGene chr11 120360184 - 25618 graph_last l 15 88 atgcagggcc 690 0.291620228275645 0.3 6 20 6 7 BM935473 all_est chr17 26602945 - 58073 graph_last l 35 109 atttttctgt 691 0.291620228275645 0.3 6 20 6 7 NM_010411 refGene chr18 38054458 - 64117 graph_last l 53 97 caaggtgaac 692 0.291620228275645 0.3 6 20 6 7 NM_023134 refGene chr14 35775081 + 40665 graph_last 0 51 ctgtcagtgg 693 0.291620228275645 0.3 6 20 6 7 NM_026757 refGene chr11 69809604 - 21121 graph_last l 84 286 gtgcgctaga 694 0.291620228275645 0.3 6 20 6 7 AK030708 knownGene chr10 86847504 - 14428 graph_last l 5 42 tacccttgcc 695 0.291620228275645 0.3 6 20 6 7 aagttcgatg 696 0.301143607204143 0.346153846153846 9 26 9 9 AK080973 knownGene chr4 74397681 - 94336 graph_last l 26 94 gagtctcttc 697 0.301143607204143 0.346153846153846 9 26 9 9 aggctcattt 698 0.302149035937979 6.66666666666667 20 3 21 1 NM_023130 refGene chr2 155492314 + 80608 graph_last l 18 107 cattcttcct 699 0.302149035937979 6.66666666666667 20 3 21 1 NM_008060 refGene chr19 9080865 - 67898 graph_last b 90 266 cgatcccctt 700 0.302149035937979 6.66666666666667 20 3 21 1 gcccaggctc 701 0.302149035937979 6.66666666666667 20 3 21 1 gcctctggtg 702 0.302149035937979 6.66666666666667 20 3 21 1 NM_175407 refGene chr10 44596673 - 12030 graph_last 15 58 aaattggggg 703 0.316018169388717 0.214285714285714 3 14 3 5 acgctgaata 704 0.316018169388717 7 21 3 22 1 agagctgtgg 705 0.316018169388717 0.214285714285714 3 14 3 5 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 706 0.316018169388717 2.85714285714286 40 14 42 5 NM_007881 refGene chr6 126665846 - 116898 graph_last l 15 53 ctcatcaccc 707 0.316018169388717 0.214285714285714 3 14 3 5 NM_153566 refGene chr4 123811833 + 97083 graph_last l 12 28 ctggatacta 708 0.316018169388717 0.214285714285714 3 14 3 5 ctgtaaatag 709 0.316018169388717 7 21 3 22 1 NM_022997 refGene chr8 86197927 + 131907 graph_last l 4 20 gacattagat 710 0.316018169388717 0.214285714285714 3 14 3 5 gcctagaact 711 0.316018169388717 0.214285714285714 3 14 3 5 NM_026899 refGene chr4 153846956 + 99801 graph_last l 68 159 gcctgccctg 712 0.316018169388717 0.214285714285714 3 14 3 5 NM_021921 refGene chr15 91147347 - 49270 graph_last l 19 73 gcttttggga 713 0.316018169388717 0.214285714285714 3 14 3 5 NM_175543 refGene chr11 79268990 + 22077 graph_last l 39 112 gggctgggcc 714 0.316018169388717 0.214285714285714 3 14 3 5 NM_019686 refGene chr9 56661323 - 137777 graph_last l 8 24 gtatcactta 715 0.316018169388717 0.214285714285714 3 14 3 5 NM_009720 refGene chr11 55071811 - 20087 graph_last l 56 134 taataaagtc 716 0.316018169388717 7 21 3 22 1 tacattttca 717 0.316018169388717 2.85714285714286 40 14 42 5 NM_008113 refGene chr17 25793383 - 57991 graph_last l 42 84 tctgccagga 718 0.316018169388717 0.214285714285714 3 14 3 5 NM_013879 refGene chr5 114215618 + 106194 graph_last l 95 218 tgtgccccag 719 0.316018169388717 0.214285714285714 3 14 3 5 ttatcaagtg 720 0.316018169388717 0.214285714285714 3 14 3 5 NM_011879 refGene chr18 36874885 + 64015 graph_last l 54 121 ttccattaaa 721 0.316018169388717 7 21 3 22 1 ttcctgtgtc 722 0.316018169388717 0.214285714285714 3 14 3 5 NM_175153 refGene chr9 67378684 + 138630 graph_last 1 19 tttttaaatg 723 0.316018169388717 0.214285714285714 3 14 3 5 tttttaatgt 724 0.316018169388717 1.55172413793103 135 87 141 30 aaaataaaaa 725 0.323369522943619 Inf 13 0 14 0 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 726 0.323369522943619 Inf 13 0 14 0 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 727 0.323369522943619 4.16666666666667 25 6 26 2 cttgcaagtg 728 0.323369522943619 2.83333333333333 34 12 36 4 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 729 0.323369522943619 Inf 13 0 14 0 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 730 0.323369522943619 Inf 13 0 14 0 NM_178624 refGene chr9 116584101 + 141769 graph_last l 13 60 gcaccagcag 731 0.323369522943619 Inf 13 0 14 0 NM_177270 refGene chr5 92464338 - 104668 graph_last 40 111 gtgactgttc 732 0.323369522943619 Inf 13 0 14 0 gtgtctcaca 733 0.323369522943619 Inf 13 0 14 0 gttgtgattt 734 0.323369522943619 4.16666666666667 25 6 26 2 NM_010191 refGene chr14 54293259 + 41935 graph_last l 82 219 gtttgctgtg 735 0.323369522943619 Inf 13 0 14 0 tgaatggcct 736 0.323369522943619 4.16666666666667 25 6 26 2 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 737 0.323369522943619 4.16666666666667 25 6 26 2 NM_145522 refGene chr2 35049371 + 73654 graph_last l 138 371 tggtgtagga 738 0.323369522943619 2.83333333333333 34 12 36 4 tgtatgtctg 739 0.323369522943619 Inf 13 0 14 0 ttataatata 740 0.323369522943619 2.83333333333333 34 12 36 4 ttgagaatga 741 0.323369522943619 Inf 13 0 14 0 ttgctgtgtg 742 0.323369522943619 Inf 13 0 14 0 NM_009875 refGene chr6 136327709 + 117541 graph_last l 10 54 ttttgtgcat 743 0.323369522943619 Inf 13 0 14 0 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 744 0.330483880725545 4.33333333333333 26 6 27 2 NM_023665 refGene chr4 133782708 + 98031 graph_last l 65 174 gttgaggttt 745 0.330483880725545 4.33333333333333 26 6 27 2 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 746 0.330483880725545 4.33333333333333 26 6 27 2 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 747 0.332461174469509 3.44444444444444 31 9 32 3 tagatcctag 748 0.332461174469509 3.44444444444444 31 9 32 3 tgtaagtctg 749 0.332461174469509 3.44444444444444 31 9 32 3 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 750 0.332461174469509 3.44444444444444 31 9 32 3 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 751 0.341271673235585 Inf 14 0 15 0 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 752 0.341271673235585 Inf 14 0 15 0 NM_025482 refGene chr2 181400858 + 82485 graph_last l 34 183 cctctgtttg 753 0.341271673235585 0.489795918367347 24 49 25 17 gattctccga 754 0.341271673235585 Inf 14 0 15 0 gcctcctcct 755 0.341271673235585 Inf 14 0 15 0 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 756 0.341271673235585 Inf 14 0 15 0 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 757 0.341271673235585 Inf 14 0 15 0 tctgagtggt 758 0.341271673235585 Inf 14 0 15 0 tgaagacagt 759 0.341271673235585 Inf 14 0 15 0 NM_138660 refGene chr11 98417334 + 23682 graph_last l 10 51 tgtgttgttt 760 0.341271673235585 Inf 14 0 15 0 NM_198163 refGene chr5 114768497 + 106277 graph_last l 77 143 ttaacactgt 761 0.341271673235585 Inf 14 0 15 0 ttttttttcc 762 0.341271673235585 Inf 14 0 15 0 gccaagtgga 763 0.351055133038807 1.46017699115044 165 113 172 39 aaattggagg 764 0.372549970977701 0.294117647058824 5 17 5 6 aagaatgtag 765 0.372549970977701 0.294117647058824 5 17 5 6 NM_009242 refGene chr11 55019713 - 20083 graph_last l 148 698 caaactctca 766 0.372549970977701 0.294117647058824 5 17 5 6 cagaacccac 767 0.372549970977701 2.47058823529412 42 17 44 6 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 768 0.372549970977701 0.294117647058824 5 17 5 6 ctgctgtacc 769 0.372549970977701 0.294117647058824 5 17 5 6 gattgatgca 770 0.372549970977701 0.294117647058824 5 17 5 6 NM_008729 refGene chr15 31786949 - 46004 graph_last l 24 59 gtcactcaac 771 0.372549970977701 0.294117647058824 5 17 5 6 gcaatctgat 772 0.373324334598711 2.52941176470588 43 17 45 6 NM_175114 refGene chr9 123859088 + 142240 graph_last l 8 43 aacaactccc 773 0.394067572351772 0.166666666666667 2 12 2 4 NM_153526 refGene chr5_random 23332765 - 109461 graph_last 21 98 aacctcgctg 774 0.394067572351772 0.347826086956522 8 23 8 8 AI839905 all_est chrX 145838622 - 152391 graph_last l 12 31 acagtgcatt 775 0.394067572351772 0.166666666666667 2 12 2 4 NM_133801 refGene chr17 56988329 - 60299 graph_last l 15 47 accacaaagg 776 0.394067572351772 0.166666666666667 2 12 2 4 NM_020004 refGene chr11 100368729 - 23871 graph_last l 11 37 aggggccttg 777 0.394067572351772 0.166666666666667 2 12 2 4 NM_138660 refGene chr11 98391018 + 23682 graph_last l 12 38 aggtgctatc 778 0.394067572351772 0.166666666666667 2 12 2 4 atcttcctcc 779 0.394067572351772 0.166666666666667 2 12 2 4 caattcttta 780 0.394067572351772 0.166666666666667 2 12 2 4 NM_198613 refGene chr7 13784132 + 119083 graph_last l 87 238 cagttcgatg 781 0.394067572351772 0.347826086956522 8 23 8 8 NM_178252 refGene chr7 24426999 - 119943 graph_last l 11 49 cctcccgaca 782 0.394067572351772 0.166666666666667 2 12 2 4 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 783 0.394067572351772 0.166666666666667 2 12 2 4 NM_026585 refGene chr6 117890386 + 116329 graph_last b 14 37 cggggccttc 784 0.394067572351772 0.166666666666667 2 12 2 4 ctgttaatac 785 0.394067572351772 0.166666666666667 2 12 2 4 AK013794 all_mrna chr7 73721823 + 122515 graph_last 2 13 cttaaacaaa 786 0.394067572351772 0.166666666666667 2 12 2 4 gactgcccct 787 0.394067572351772 0.166666666666667 2 12 2 4 NM_026238 refGene chr17 25379974 - 57923 graph_last 37 99 gagccctata 788 0.394067572351772 0.166666666666667 2 12 2 4 NM_175484 refGene chr9 64772890 - 138441 graph_last l 18 58 gagctcaaaa 789 0.394067572351772 0.166666666666667 2 12 2 4 NM_009746 refGene chr7 119758378 - 125247 graph_last 1 8 gatttcgtat 790 0.394067572351772 0.166666666666667 2 12 2 4 NM_015827 refGene chr9 100985513 + 140652 graph_last l 21 46 gcctcccaaa 791 0.394067572351772 0.166666666666667 2 12 2 4 gctctgtgtc 792 0.394067572351772 0.166666666666667 2 12 2 4 gcttttattt 793 0.394067572351772 0.166666666666667 2 12 2 4 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 794 0.394067572351772 2.17391304347826 50 23 52 8 BC049852 knownGene chr7 15939737 + 119234 graph_last l 4 21 tgggcagcag 795 0.394067572351772 0.166666666666667 2 12 2 4 NM_029541 refGene chrX 124607824 + 151527 graph_last 4 30 tgtaacttac 796 0.394067572351772 0.166666666666667 2 12 2 4 AK129247 knownGene chr12 3991308 - 25954 graph_last 15 54 tgtgtgatgt 797 0.394067572351772 0.166666666666667 2 12 2 4 NM_008882 refGene chr1 198789464 + 9854 graph_last l 18 42 ttaaagtttt 798 0.394067572351772 0.166666666666667 2 12 2 4 ttatttttag 799 0.394067572351772 0.166666666666667 2 12 2 4 NM_182991 refGene chr8 70745352 - 130941 graph_last l 49 119 ttctgagtat 800 0.394067572351772 0.166666666666667 2 12 2 4 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 801 0.394067572351772 0.166666666666667 2 12 2 4 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 802 0.394067572351772 0.447368421052632 17 38 18 13 caaatgaagt 803 0.403586050172583 6 18 3 19 1 NM_145130 refGene chr6 126639248 + 116885 graph_last l 14 119 ccaggaattc 804 0.403586050172583 6 18 3 19 1 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 805 0.403586050172583 6 18 3 19 1 gcagagtttt 806 0.403586050172583 6 18 3 19 1 NM_025550 refGene chr14 9444346 - 39138 graph_last l 32 106 taaagccact 807 0.403586050172583 6 18 3 19 1 NM_010817 refGene chr8 109113003 - 133214 graph_last l 31 117 tattgtttac 808 0.403586050172583 6 18 3 19 1 NM_023328 refGene chr13 59233431 - 35436 graph_last l 99 174 tgaactgtgt 809 0.403586050172583 6 18 3 19 1 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 810 0.403847115164175 1.96551724137931 57 29 60 10 atccgaaaga 811 0.403847115164175 0.633663366336634 64 101 67 35 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 812 0.404424901227907 1.825 73 40 76 14 ttggctgccc 813 0.404424901227907 1.825 73 40 76 14 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 814 0.405705455176094 0.519230769230769 27 52 28 18 aagaaaacat 815 0.410935117712521 6.33333333333333 19 3 20 1 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 816 0.410935117712521 6.33333333333333 19 3 20 1 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 817 0.410935117712521 6.33333333333333 19 3 20 1 NM_174997 refGene chr1 35501828 - 1439 graph_last l 16 91 gaacttatgt 818 0.410935117712521 6.33333333333333 19 3 20 1 gattagggtg 819 0.410935117712521 6.33333333333333 19 3 20 1 NM_010911 refGene chr2 156770802 + 80726 graph_last 24 122 gccattggaa 820 0.410935117712521 6.33333333333333 19 3 20 1 gcgaagctca 821 0.414877896500591 0.663636363636364 73 110 76 38 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 822 0.42649464259229 3.11111111111111 28 9 29 3 tggagagaat 823 0.42649464259229 3.11111111111111 28 9 29 3 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 824 0.427291735597346 3.83333333333333 23 6 24 2 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 825 0.427291735597346 3.83333333333333 23 6 24 2 NM_146019 refGene chr11 68914658 - 21006 graph_last l 49 176 gggaaccccc 826 0.427291735597346 3.83333333333333 23 6 24 2 NM_011508 refGene chr11 99905611 + 23826 graph_last l 115 284 tgaaggaaca 827 0.427291735597346 3.83333333333333 23 6 24 2 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 828 0.434441030437749 4 24 6 25 2 NM_008568 refGene chr5 136635605 + 107939 graph_last l 68 253 gacctgagta 829 0.434441030437749 4 24 6 25 2 atactgaagc 830 0.434733298206151 0.644230769230769 67 104 70 36 AV342873 all_est chr1 163471941 - 7703 graph_last l 4 23 aaaggatggg 831 0.437806234091927 0.111111111111111 1 9 1 3 aaataacaat 832 0.437806234091927 0.111111111111111 1 9 1 3 genomic chr5 135975983 + 0 unique_long l 2 6 aaggcaagta 833 0.437806234091927 0.111111111111111 1 9 1 3 NM_027901 refGene chr5 29494221 - 101565 graph_last l 7 26 aaggctcctg 834 0.437806234091927 0.111111111111111 1 9 1 3 NM_012053 refGene chr15 78134217 + 48155 graph_last 84 491 aatcctgtgg 835 0.437806234091927 0.594202898550725 41 69 43 24 aatgtggcag 836 0.437806234091927 0.111111111111111 1 9 1 3 aattcccttt 837 0.437806234091927 Inf 11 0 12 0 NM_008817 refGene chr7 6530850 + 118679 graph_last l 27 91 acaagtgcgt 838 0.437806234091927 0.111111111111111 1 9 1 3 NM_008144 refGene chr19 9160629 - 67907 graph_last l 15 68 acctgcgcct 839 0.437806234091927 0.111111111111111 1 9 1 3 acggggagag 840 0.437806234091927 0.111111111111111 1 9 1 3 AK005167 knownGene chr7 24244951 + 119924 graph_last l 55 397 actcctgtcc 841 0.437806234091927 0.594202898550725 41 69 43 24 NM_032002 refGene chr9 57340402 + 137846 graph_last 1 14 acttaagaaa 842 0.437806234091927 0.111111111111111 1 9 1 3 NM_145527 refGene chr2 91753611 - 76816 graph_last l 13 36 agaggacgga 843 0.437806234091927 0.111111111111111 1 9 1 3 NM_133926 refGene chr6 115093840 - 116120 graph_last 0 36 agaggggttg 844 0.437806234091927 0.285714285714286 4 14 4 5 agagttcaga 845 0.437806234091927 Inf 12 0 13 0 NM_133901 refGene chr5 143720224 + 108421 graph_last 13 34 agattagtcc 846 0.437806234091927 0.111111111111111 1 9 1 3 agattattgt 847 0.437806234091927 Inf 11 0 12 0 agctccccct 848 0.437806234091927 Inf 11 0 12 0 NM_024222 refGene chr9 117615376 - 141880 graph_last l 6 31 agggaaataa 849 0.437806234091927 Inf 11 0 12 0 NM_026499 refGene chr2 163549271 + 81143 graph_last l 12 46 agtgtgaaac 850 0.437806234091927 Inf 11 0 12 0 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 851 0.437806234091927 0.545454545454545 30 55 31 19 NM_011865 refGene chr6 87941239 - 114590 graph_second 0 8 atccaactgt 852 0.437806234091927 0.111111111111111 1 9 1 3 NM_025740 refGene chr11 29119939 - 18514 graph_last l 19 106 atgagtctgt 853 0.437806234091927 0.391304347826087 9 23 9 8 NM_144896 refGene chr3 87616277 + 86417 graph_last l 5 19 atggtggcag 854 0.437806234091927 0.111111111111111 1 9 1 3 atgtactcgg 855 0.437806234091927 Inf 11 0 12 0 NM_013700 refGene chr6 126743522 - 116908 graph_last 25 140 atgtgaataa 856 0.437806234091927 Inf 12 0 13 0 NM_133697 refGene chr5 64944338 + 103345 graph_last 0 62 attgattaat 857 0.437806234091927 Inf 12 0 13 0 NM_178119 refGene chr1 91822089 + 4551 graph_last l 4 21 attttacgtt 858 0.437806234091927 0.111111111111111 1 9 1 3 NM_133942 refGene chr7 122990909 + 125450 graph_last l 2 14 caaatgtgcc 859 0.437806234091927 0.111111111111111 1 9 1 3 cacaaaataa 860 0.437806234091927 Inf 11 0 12 0 NM_177646 refGene chr1 89884374 - 4476 graph_last 0 22 cacacagtgg 861 0.437806234091927 0.111111111111111 1 9 1 3 NM_177215 refGene chrX 39285082 + 148272 graph_last l 12 41 cacgtagtgc 862 0.437806234091927 0.111111111111111 1 9 1 3 cagactgctc 863 0.437806234091927 0.391304347826087 9 23 9 8 NM_080638 refGene chr7 119108898 + 125151 graph_last l 13 39 cagcattcag 864 0.437806234091927 0.111111111111111 1 9 1 3 genomic chr4 129240676 - 0 unique_long l 22 104 cagccaggtg 865 0.437806234091927 0.111111111111111 1 9 1 3 NM_010327 refGene chr16 18227773 - 52048 graph_last l 6 31 caggagatgt 866 0.437806234091927 0.111111111111111 1 9 1 3 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 867 0.437806234091927 Inf 11 0 12 0 cagtgatttc 868 0.437806234091927 0.111111111111111 1 9 1 3 NM_010864 refGene chr9 77758330 + 139524 graph_last l 8 16 catatattca 869 0.437806234091927 0.111111111111111 1 9 1 3 catccacaag 870 0.437806234091927 0.111111111111111 1 9 1 3 NM_010699 refGene chr7 39739679 + 120908 graph_last 230 648 ccaaataaaa 871 0.437806234091927 2.03846153846154 53 26 55 9 ccacagggca 872 0.437806234091927 0.111111111111111 1 9 1 3 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 873 0.437806234091927 Inf 12 0 13 0 ccagaacaga 874 0.437806234091927 1.38129496402878 192 139 200 48 ccaggcggtg 875 0.437806234091927 0.111111111111111 1 9 1 3 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 876 0.437806234091927 0.602564102564103 47 78 49 27 NM_016925 refGene chr8 125083415 + 134242 graph_last 5 22 cctaccttcc 877 0.437806234091927 0.111111111111111 1 9 1 3 genomic chr13 37956715 + 0 unique_long l 14 34 cctctgatgc 878 0.437806234091927 0.111111111111111 1 9 1 3 NM_144916 refGene chr6 73402412 + 113854 graph_last l 4 12 ccttagccta 879 0.437806234091927 0.111111111111111 1 9 1 3 NM_183172 refGene chr10 87338202 + 14472 graph_last l 5 39 cgcatacata 880 0.437806234091927 Inf 11 0 12 0 NM_053074 refGene chr7 37773215 + 120706 graph_last l 13 68 cgcgcgctgg 881 0.437806234091927 0.285714285714286 4 14 4 5 NM_025835 refGene chr9 103410948 - 140823 graph_last l 9 41 cgggctccac 882 0.437806234091927 0.111111111111111 1 9 1 3 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 883 0.437806234091927 Inf 12 0 13 0 NM_172522 refGene chr9 67089160 - 138600 graph_last l 31 89 ctatggcttc 884 0.437806234091927 Inf 12 0 13 0 genomic chr2 127510118 - 0 unique_long l 2 13 ctgcaggcct 885 0.437806234091927 0.111111111111111 1 9 1 3 ctgcctgaga 886 0.437806234091927 Inf 11 0 12 0 NM_011670 refGene chr5_random 2620508 + 109059 graph_last 5 44 ctgggccgtg 887 0.437806234091927 0.285714285714286 4 14 4 5 ctgtctggtt 888 0.437806234091927 0.111111111111111 1 9 1 3 NM_009383 refGene chr7 120686136 + 125323 graph_last l 3 17 cttactatgg 889 0.437806234091927 0.111111111111111 1 9 1 3 NM_029810 refGene chr19 46888273 - 70244 graph_last l 2 17 ctttcattat 890 0.437806234091927 0.111111111111111 1 9 1 3 NM_019880 refGene chr17 28964297 - 58352 graph_last l 10 27 ctttgccctg 891 0.437806234091927 0.111111111111111 1 9 1 3 AI390780 all_est chr4 11907783 - 91323 graph_last l 39 92 gaaacctcta 892 0.437806234091927 Inf 12 0 13 0 NM_018799 refGene chr4 128521641 + 97495 graph_last l 10 55 gaaagggctg 893 0.437806234091927 0.111111111111111 1 9 1 3 NM_146157 refGene chr4 138361968 + 98421 graph_last l 6 28 gaaatgagat 894 0.437806234091927 0.111111111111111 1 9 1 3 gaacatattt 895 0.437806234091927 Inf 12 0 13 0 BC024678 knownGene chr5 77020270 + 104028 graph_last l 11 33 gaacttggaa 896 0.437806234091927 0.111111111111111 1 9 1 3 NM_133971 refGene chr8 12333881 - 127998 graph_last l 7 23 gaactttgga 897 0.437806234091927 0.111111111111111 1 9 1 3 NM_009129 refGene chr1 81220284 - 3857 graph_last l 55 117 gaattgatga 898 0.437806234091927 0.111111111111111 1 9 1 3 gacaaaggtg 899 0.437806234091927 Inf 11 0 12 0 gacccagctc 900 0.437806234091927 0.111111111111111 1 9 1 3 gacgagatgg 901 0.437806234091927 Inf 11 0 12 0 gactctggct 902 0.437806234091927 0.111111111111111 1 9 1 3 gagaaatata 903 0.437806234091927 Inf 12 0 13 0 NM_175015 refGene chr2 74302937 + 75802 graph_last l 42 118 gcaaacaaga 904 0.437806234091927 Inf 11 0 12 0 gccaaggtgg 905 0.437806234091927 0.111111111111111 1 9 1 3 gccccaggag 906 0.437806234091927 0.111111111111111 1 9 1 3 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 907 0.437806234091927 Inf 11 0 12 0 NM_198250 refGene chr7 37356041 + 120667 graph_last l 27 125 gccgccgtga 908 0.437806234091927 0.285714285714286 4 14 4 5 NM_145989 refGene chr3 137227978 + 89500 graph_last l 6 21 gcgttatcag 909 0.437806234091927 0.111111111111111 1 9 1 3 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 910 0.437806234091927 0.391304347826087 9 23 9 8 NM_010480 refGene chr12 106260821 - 31241 graph_last 20 90 gcttagaagt 911 0.437806234091927 0.111111111111111 1 9 1 3 NM_008801 refGene chr1 88425290 - 4331 graph_last l 20 37 ggaacaaacc 912 0.437806234091927 0.111111111111111 1 9 1 3 NM_009974 refGene chr8 96736483 - 132594 graph_last l 7 21 ggagatgaga 913 0.437806234091927 0.111111111111111 1 9 1 3 ggagatttta 914 0.437806234091927 0.285714285714286 4 14 4 5 ggctctgtga 915 0.437806234091927 0.111111111111111 1 9 1 3 AK005166 knownGene chr9 111415950 - 141435 graph_last 0 6 gggactatgg 916 0.437806234091927 0.111111111111111 1 9 1 3 gggatataaa 917 0.437806234091927 0.285714285714286 4 14 4 5 AK129151 knownGene chr3 104499438 + 87776 graph_last 2 22 ggtgtgggct 918 0.437806234091927 0.111111111111111 1 9 1 3 NM_021519 refGene chr2 25828459 + 72856 graph_last l 161 295 gtcaaacgga 919 0.437806234091927 Inf 12 0 13 0 NM_170760 refGene chr7 24529829 + 119946 graph_last l 11 43 gtcgcttctg 920 0.437806234091927 0.111111111111111 1 9 1 3 gtgacagttt 921 0.437806234091927 0.111111111111111 1 9 1 3 NM_199322 refGene chr10 83160312 + 14127 graph_last l 12 31 gtgcatagtg 922 0.437806234091927 0.111111111111111 1 9 1 3 gtgccatatt 923 0.437806234091927 Inf 12 0 13 0 NM_023173 refGene chr1 174644531 - 8404 graph_last l 4 11 gtggatgtca 924 0.437806234091927 0.111111111111111 1 9 1 3 NM_009931 refGene chr8 11909162 - 127961 graph_last l 13 28 gtgtctgata 925 0.437806234091927 0.111111111111111 1 9 1 3 NM_011707 refGene chr11 78072882 + 21953 graph_last l 20 59 gtgtgccagg 926 0.437806234091927 0.111111111111111 1 9 1 3 NM_008698 refGene chr11 4792057 + 17322 graph_last l 31 55 gttgtgctac 927 0.437806234091927 0.111111111111111 1 9 1 3 gtttcacttt 928 0.437806234091927 0.391304347826087 9 23 9 8 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 929 0.437806234091927 Inf 11 0 12 0 NM_172691 refGene chr4 42317899 - 92612 graph_last l 68 126 taataaagtg 930 0.437806234091927 Inf 12 0 13 0 taatccgtac 931 0.437806234091927 Inf 12 0 13 0 tacaaaaagc 932 0.437806234091927 0.111111111111111 1 9 1 3 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 933 0.437806234091927 0.111111111111111 1 9 1 3 NM_019491 refGene chr13 17712207 - 32922 graph_last 22 61 tacgacgagt 934 0.437806234091927 0.111111111111111 1 9 1 3 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 935 0.437806234091927 0.111111111111111 1 9 1 3 tacttgtatg 936 0.437806234091927 Inf 11 0 12 0 NM_010837 refGene chr7 90820373 - 123299 graph_last l 2 16 tagtgctccc 937 0.437806234091927 0.285714285714286 4 14 4 5 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 938 0.437806234091927 Inf 12 0 13 0 NM_146005 refGene chr10 73136589 + 13489 graph_last l 31 71 tatgagaaaa 939 0.437806234091927 Inf 12 0 13 0 NM_053201 refGene chrX 95028023 + 150627 graph_last l 29 73 tattaggagt 940 0.437806234091927 0.111111111111111 1 9 1 3 tatttcagtg 941 0.437806234091927 0.111111111111111 1 9 1 3 tatttgggtt 942 0.437806234091927 0.111111111111111 1 9 1 3 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 943 0.437806234091927 0.111111111111111 1 9 1 3 tcaataaaaa 944 0.437806234091927 Inf 12 0 13 0 tcatccaatg 945 0.437806234091927 0.111111111111111 1 9 1 3 NM_010950 refGene chr7_random 33673352 + 127195 graph_last 49 91 tcggtgcccg 946 0.437806234091927 0.111111111111111 1 9 1 3 NM_018770 refGene chr9 49856825 + 137345 graph_second l 11 56 tcgttgaaag 947 0.437806234091927 0.111111111111111 1 9 1 3 NM_173748 refGene chr11 6004172 - 17451 graph_last l 17 39 tctccatcac 948 0.437806234091927 0.111111111111111 1 9 1 3 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 949 0.437806234091927 Inf 11 0 12 0 AK082350 knownGene chr8 11308623 + 127900 graph_last l 8 19 tctttctgcc 950 0.437806234091927 0.111111111111111 1 9 1 3 NM_080456 refGene chr16 93512171 + 56067 graph_last 0 59 tgacaatatt 951 0.437806234091927 0.285714285714286 4 14 4 5 NM_019771 refGene chr2 144020106 - 79829 graph_last l 11 68 tgactgcctg 952 0.437806234091927 0.111111111111111 1 9 1 3 NM_011627 refGene chr9 88576767 + 140001 graph_last 0 6 tgagtgcagc 953 0.437806234091927 0.111111111111111 1 9 1 3 tgcaagaccc 954 0.437806234091927 0.111111111111111 1 9 1 3 NM_019743 refGene chr6 101888723 - 115566 graph_last 26 57 tgcacgactg 955 0.437806234091927 Inf 11 0 12 0 tgctctgcct 956 0.437806234091927 0.285714285714286 4 14 4 5 NM_021884 refGene chr7 39774152 - 120912 graph_last l 38 91 tgctgtcagc 957 0.437806234091927 Inf 11 0 12 0 NM_028982 refGene chr6 136643905 + 117563 graph_last l 35 126 tggtgcggtg 958 0.437806234091927 0.285714285714286 4 14 4 5 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 959 0.437806234091927 0.111111111111111 1 9 1 3 NM_178880 refGene chr16 93114726 + 56030 graph_last l 50 101 tgtattacag 960 0.437806234091927 Inf 12 0 13 0 tgttaagatg 961 0.437806234091927 Inf 11 0 12 0 tgttcaatca 962 0.437806234091927 Inf 12 0 13 0 tgtttggagc 963 0.437806234091927 Inf 12 0 13 0 NM_009061 refGene chr1 147167009 - 6919 graph_last l 42 62 ttaccacata 964 0.437806234091927 0.111111111111111 1 9 1 3 NM_013855 refGene chr17 23976949 + 57786 graph_second 0 21 ttataaactg 965 0.437806234091927 0.111111111111111 1 9 1 3 NM_138587 refGene chr6 22172879 - 110818 graph_last l 5 13 ttatggcagt 966 0.437806234091927 0.111111111111111 1 9 1 3 NM_027287 refGene chr3 156136611 + 90410 graph_second 1 13 ttcaaggata 967 0.437806234091927 0.111111111111111 1 9 1 3 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 968 0.437806234091927 Inf 12 0 13 0 ttcattctta 969 0.437806234091927 0.285714285714286 4 14 4 5 NM_008594 refGene chr7 71455253 + 122294 graph_last l 21 96 ttccattccg 970 0.437806234091927 0.111111111111111 1 9 1 3 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 971 0.437806234091927 0.379310344827586 11 29 12 10 NM_008974 refGene chr4 128752984 - 97529 graph_last 9 35 ttctcataag 972 0.437806234091927 0.111111111111111 1 9 1 3 ttctcatcac 973 0.437806234091927 0.111111111111111 1 9 1 3 tttaacaaaa 974 0.437806234091927 0.111111111111111 1 9 1 3 tttataaaat 975 0.437806234091927 0.111111111111111 1 9 1 3 tttattcctc 976 0.437806234091927 Inf 11 0 12 0 BC046968 knownGene chr5 143048358 - 108379 graph_last l 17 41 tttctcagct 977 0.437806234091927 0.111111111111111 1 9 1 3 tttgtaatac 978 0.437806234091927 0.111111111111111 1 9 1 3 gccaagggtc 979 0.439307178217898 1.96551724137931 57 29 59 10 tgacaatttt 980 0.442258268355154 2.57142857142857 36 14 38 5 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 981 0.448943421964163 0.413793103448276 12 29 13 10 NM_026137 refGene chrX 6684053 - 147079 graph_last l 23 110 attttggggg 982 0.478693977485613 0.35 7 20 7 7 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 983 0.478693977485613 2.2 44 20 46 7 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 984 0.478693977485613 0.35 7 20 7 7 NM_134044 refGene chr12 83476305 - 30013 graph_last l 8 58 cctacactcc 985 0.478693977485613 0.35 7 20 7 7 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 986 0.478693977485613 2.58333333333333 31 12 32 4 ctttgcaatg 987 0.478693977485613 2.66666666666667 32 12 33 4 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 988 0.478693977485613 0.35 7 20 7 7 NM_007597 refGene chr11 49920151 - 19666 graph_last l 49 306 taacagttgt 989 0.478693977485613 2.66666666666667 32 12 33 4 tgctgtgcat 990 0.478693977485613 2.58333333333333 31 12 32 4 NM_175162 refGene chr8 47049163 - 129791 graph_last 25 63 ttgtatatgt 991 0.478693977485613 0.35 7 20 7 7 NM_025509 refGene chr3 134292460 - 89342 graph_last l 32 119 atgtatgaaa 992 0.503244489580574 5.66666666666667 17 3 18 1 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 993 0.503244489580574 5.33333333333333 16 3 17 1 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 994 0.503244489580574 5.66666666666667 17 3 18 1 NM_172755 refGene chr8 70418108 - 130912 graph_last l 23 73 ctagctaaat 995 0.503244489580574 5.66666666666667 17 3 18 1 NM_019829 refGene chr19 9252464 - 67921 graph_last l 37 132 ctgcagccta 996 0.503244489580574 5.33333333333333 16 3 17 1 NM_178928 refGene chr18 61852238 + 65311 graph_last 0 138 gaaggttcta 997 0.503244489580574 5.66666666666667 17 3 18 1 gaataaagag 998 0.503244489580574 5.33333333333333 16 3 17 1 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 999 0.503244489580574 2.88888888888889 26 9 27 3 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 1000 0.503244489580574 5.33333333333333 16 3 17 1 NM_007457 refGene chr5 135850695 - 107860 graph_last l 146 397 ggccaagtgg 1001 0.503244489580574 2.88888888888889 26 9 27 3 NM_007999 refGene chr19 10130399 + 67962 graph_last 30 134 ggctttggag 1002 0.503244489580574 5.33333333333333 16 3 17 1 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 1003 0.503244489580574 2.88888888888889 26 9 27 3 NM_011278 refGene chr5 32900848 + 101872 graph_last l 86 183 ggtatcagtc 1004 0.503244489580574 5.33333333333333 16 3 17 1 ggtatggagg 1005 0.503244489580574 5.33333333333333 16 3 17 1 taaaagttgt 1006 0.503244489580574 5.66666666666667 17 3 18 1 taaatgtcct 1007 0.503244489580574 5.66666666666667 17 3 18 1 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 1008 0.503244489580574 5.66666666666667 17 3 18 1 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 1009 0.503244489580574 5.66666666666667 17 3 18 1 NM_146087 refGene chr18 61709666 + 65292 graph_last l 35 105 tatgtgtgtt 1010 0.503244489580574 5.33333333333333 16 3 17 1 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 1011 0.503244489580574 5.33333333333333 16 3 17 1 NM_025396 refGene chr8 71933405 + 131081 graph_last l 28 185 cacgccgtgg 1012 0.515305647341379 3.5 21 6 22 2 NM_016792 refGene chr18 63768936 - 65404 graph_last l 103 198 cagttgtaaa 1013 0.515305647341379 3.66666666666667 22 6 23 2 NM_010193 refGene chr9 65145351 - 138457 graph_last 18 100 gcaattgaca 1014 0.515305647341379 3.66666666666667 22 6 23 2 gcacaggaga 1015 0.515305647341379 3.66666666666667 22 6 23 2 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 1016 0.515305647341379 3.66666666666667 22 6 23 2 NM_010562 refGene chr7 97874520 + 123908 graph_last l 55 216 ggagggatca 1017 0.515305647341379 3.5 21 6 22 2 NM_008251 refGene chr16 98082681 - 56348 graph_last l 29 115 taataaaaat 1018 0.515305647341379 3.5 21 6 22 2 tccctggcat 1019 0.515305647341379 3.5 21 6 22 2 ttaggcaagt 1020 0.515305647341379 3.66666666666667 22 6 23 2 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 1021 0.515305647341379 3.66666666666667 22 6 23 2 NM_016860 refGene chr19 46566407 - 70209 graph_last l 38 177 gactgcagtg 1022 0.521404602267729 0.473684210526316 18 38 19 13 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 1023 0.521446214434219 0.534883720930233 23 43 24 15 NM_028439 refGene chr1 122653373 - 5657 graph_last l 69 344 aagacctatg 1024 0.538512477055233 0.423076923076923 11 26 11 9 NM_019411 refGene chr11 51747475 + 19812 graph_last l 93 195 actgtagatg 1025 0.538512477055233 0.423076923076923 11 26 11 9 gtctacagag 1026 0.538512477055233 0.423076923076923 11 26 11 9 cccacaaggt 1027 0.540979033669933 2.04347826086957 47 23 49 8 gtgtatcttt 1028 0.540979033669933 2.04347826086957 47 23 49 8 NM_011634 refGene chr9 110584487 + 141318 graph_last l 146 323 cctgtgggtc 1029 0.542704755434258 0.4375 14 32 15 11 NM_153545 refGene chr11 120272391 + 25607 graph_last l 8 32 aaggctgcag 1030 0.559239105014143 0.25 3 12 3 4 NM_013635 refGene chr12 27668053 + 26961 graph_last l 32 64 acaaagtgtc 1031 0.559239105014143 0.25 3 12 3 4 accaagatct 1032 0.559239105014143 0.59016393442623 36 61 38 21 NM_029432 refGene chr2 130945921 - 79188 graph_last 1 24 aggaagctga 1033 0.559239105014143 0.25 3 12 3 4 NM_178880 refGene chr16 93114447 + 56030 graph_last l 9 27 atcagtacta 1034 0.559239105014143 0.25 3 12 3 4 NM_027878 refGene chr10 90782898 + 14647 graph_last l 7 24 atctcagtag 1035 0.559239105014143 0.25 3 12 3 4 NM_026211 refGene chr13 55372901 + 35178 graph_last l 17 61 caaacgacta 1036 0.559239105014143 0.25 3 12 3 4 cagaccctac 1037 0.559239105014143 0.25 3 12 3 4 catagtttaa 1038 0.559239105014143 0.25 3 12 3 4 NM_133971 refGene chr8 12325947 - 127998 graph_last 2 23 ccagcaggca 1039 0.559239105014143 0.25 3 12 3 4 gaaatgctgc 1040 0.559239105014143 0.25 3 12 3 4 NM_018770 refGene chr9 49855196 - 137345 graph_last l 14 48 gagacactaa 1041 0.559239105014143 0.25 3 12 3 4 NM_026737 refGene chr15 83412460 - 48711 graph_last 10 41 gagcatctgg 1042 0.559239105014143 0.25 3 12 3 4 NM_025617 refGene chr4 106060545 - 95810 graph_last l 11 59 gcaggggcgg 1043 0.559239105014143 0.25 3 12 3 4 NM_025388 refGene chr1 174972698 - 8448 graph_last 53 122 gccctggggc 1044 0.559239105014143 0.25 3 12 3 4 ggcgcggacc 1045 0.559239105014143 0.25 3 12 3 4 ggggctctgg 1046 0.559239105014143 0.4 8 20 8 7 gtggcacacg 1047 0.559239105014143 0.25 3 12 3 4 gtggtgcacg 1048 0.559239105014143 0.25 3 12 3 4 gttattgatg 1049 0.559239105014143 0.25 3 12 3 4 taattttttt 1050 0.559239105014143 0.5 19 38 20 13 NM_009861 refGene chr4 136101390 - 98237 graph_last l 29 75 tatctgctta 1051 0.559239105014143 0.4 8 20 8 7 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 1052 0.559239105014143 0.25 3 12 3 4 NM_198033 refGene chr2 29451283 + 73116 graph_last l 4 22 tgaataatct 1053 0.559239105014143 0.25 3 12 3 4 tgataaaagt 1054 0.559239105014143 2.42857142857143 34 14 36 5 tggaggaatg 1055 0.559239105014143 0.25 3 12 3 4 NM_027320 refGene chr11 101122702 - 23970 graph_last l 22 73 tgggaagtgt 1056 0.559239105014143 0.4 8 20 8 7 NM_012027 refGene chr11 59373856 + 20350 graph_last l 29 79 tggggacctg 1057 0.559239105014143 0.25 3 12 3 4 tgggtgctgg 1058 0.559239105014143 0.25 3 12 3 4 NM_146200 refGene chr7 118690565 - 125113 graph_last l 7 25 ttacaacaag 1059 0.559239105014143 0.25 3 12 3 4 NM_145533 refGene chr2 131667495 + 79273 graph_last l 20 85 ttattgcaag 1060 0.559239105014143 0.25 3 12 3 4 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 1061 0.559239105014143 0.25 3 12 3 4 NM_017367 refGene chr5 94551931 + 104851 graph_last 8 22 tttctttggt 1062 0.559239105014143 0.25 3 12 3 4 NM_177466 refGene chr6 86719540 - 114494 graph_last l 16 60 ttttgagcac 1063 0.559239105014143 0.25 3 12 3 4 aaaatgttgt 1064 0.563446141830053 Inf 10 0 10 0 aactgaaata 1065 0.563446141830053 Inf 11 0 11 0 CD352670 all_est chr5 122023911 - 106823 graph_last l 33 377 aacttaaaaa 1066 0.563446141830053 0.423076923076923 11 26 12 9 NM_025974 refGene chr9 122956983 + 142184 graph_last l 115 326 aaggcaaaga 1067 0.563446141830053 0.581818181818182 32 55 33 19 NM_007714 refGene chr11 50906857 + 19742 graph_last l 21 77 aaggttgact 1068 0.563446141830053 Inf 11 0 11 0 NM_178376 refGene chr4 85302774 + 94704 graph_last l 17 89 aataaactta 1069 0.563446141830053 Inf 11 0 11 0 aatgatgcct 1070 0.563446141830053 0.423076923076923 11 26 12 9 aatggatgaa 1071 0.563446141830053 Inf 10 0 10 0 NM_013709 refGene chr12 25538285 - 26842 graph_last 32 99 aattcaactg 1072 0.563446141830053 Inf 10 0 10 0 acaaaaaaaa 1073 0.563446141830053 Inf 11 0 11 0 genomic chr14 48083563 + 0 unique_long l 3 27 agatattaaa 1074 0.563446141830053 Inf 10 0 10 0 agatctatac 1075 0.563446141830053 1.96153846153846 51 26 53 9 agtgtggaat 1076 0.563446141830053 Inf 11 0 11 0 NM_028044 refGene chr3 124871919 + 88810 graph_last l 5 43 atcagtgtgc 1077 0.563446141830053 Inf 10 0 10 0 NM_025279 refGene chr13 58182021 - 35372 graph_second 1 37 atgttagtta 1078 0.563446141830053 Inf 10 0 10 0 caaaagaagg 1079 0.563446141830053 Inf 10 0 10 0 NM_013922 refGene chr11 50436366 - 19703 graph_last l 11 46 caaaagttta 1080 0.563446141830053 Inf 10 0 10 0 genomic chr4 123480209 - 0 unique_long l 3 22 caaataaaag 1081 0.563446141830053 Inf 11 0 11 0 NM_133999 refGene chr10 42717102 - 11882 graph_last l 36 64 caaatgacta 1082 0.563446141830053 Inf 10 0 10 0 NM_175488 refGene chr10 95970030 - 14952 graph_last 27 87 cagcttgcaa 1083 0.563446141830053 Inf 10 0 10 0 NM_013525 refGene chr1 164605371 + 7804 graph_last l 31 97 cagtgactgc 1084 0.563446141830053 Inf 10 0 10 0 ccaaacgtgt 1085 0.563446141830053 Inf 10 0 10 0 AW413767 all_est chr6 145318496 - 117964 graph_last l 5 29 ccacaataag 1086 0.563446141830053 Inf 11 0 11 0 genomic chr2 174204839 + 0 unique_long l 87 166 ccataaaaga 1087 0.563446141830053 Inf 11 0 11 0 AK032339 knownGene chr17 32966326 - 58719 graph_last 2 22 ccctgactgt 1088 0.563446141830053 Inf 10 0 10 0 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 1089 0.563446141830053 0.423076923076923 11 26 12 9 NM_028835 refGene chr6 116538523 + 116215 graph_second 0 176 ctaaaaaaaa 1090 0.563446141830053 Inf 11 0 11 0 NM_025794 refGene chr3 81427520 + 86145 graph_last l 25 64 ctccctgttg 1091 0.563446141830053 Inf 11 0 11 0 NM_026156 refGene chr8 3586476 + 127592 graph_last 2 35 ctgtgggggg 1092 0.563446141830053 Inf 11 0 11 0 NM_009149 refGene chr8 112785666 - 133441 graph_last l 24 80 ctgtgtaatt 1093 0.563446141830053 Inf 10 0 10 0 NM_009536 refGene chr11 75336791 - 21637 graph_last l 26 78 ctgtgtttca 1094 0.563446141830053 Inf 10 0 10 0 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 1095 0.563446141830053 Inf 11 0 11 0 cttgtcactc 1096 0.563446141830053 Inf 10 0 10 0 gaaaacatta 1097 0.563446141830053 Inf 10 0 10 0 gaaaataaac 1098 0.563446141830053 Inf 11 0 11 0 gaaaggaaac 1099 0.563446141830053 Inf 10 0 10 0 NM_145927 refGene chr12 72869915 - 29105 graph_last l 8 33 gaaataaaga 1100 0.563446141830053 Inf 10 0 10 0 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 1101 0.563446141830053 Inf 11 0 11 0 NM_020588 refGene chr1 137257395 - 6407 graph_last l 27 82 gagcagggga 1102 0.563446141830053 Inf 11 0 11 0 gagctgtaat 1103 0.563446141830053 Inf 11 0 11 0 gattgtcaaa 1104 0.563446141830053 Inf 11 0 11 0 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 1105 0.563446141830053 Inf 11 0 11 0 gccaccgtcc 1106 0.563446141830053 Inf 10 0 10 0 gccacttcct 1107 0.563446141830053 Inf 10 0 10 0 gctctagtct 1108 0.563446141830053 Inf 10 0 10 0 NM_009736 refGene chr4 40984051 - 92417 graph_last l 51 206 gctgccaggg 1109 0.563446141830053 0.423076923076923 11 26 12 9 AK129231 knownGene chr14 94761651 + 43740 graph_last l 13 42 gcttgtatac 1110 0.563446141830053 Inf 11 0 11 0 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 1111 0.563446141830053 Inf 11 0 11 0 ggagcactgg 1112 0.563446141830053 Inf 11 0 11 0 ggcagacaat 1113 0.563446141830053 Inf 10 0 10 0 NM_177301 refGene chr3 93009576 - 86949 graph_last 70 267 ggcagcacaa 1114 0.563446141830053 0.46875 15 32 16 11 AK045826 knownGene chr19 6624527 + 67692 graph_last l 87 261 ggctccctgc 1115 0.563446141830053 0.46875 15 32 16 11 ggctgctctg 1116 0.563446141830053 Inf 11 0 11 0 ggtcacatct 1117 0.563446141830053 Inf 10 0 10 0 BC022600 knownGene chr7_random 10613585 - 126735 graph_last 3 27 ggtgttgctt 1118 0.563446141830053 Inf 10 0 10 0 AK129136 knownGene chr7 110066244 - 124604 graph_last 14 41 gtaaagattg 1119 0.563446141830053 Inf 10 0 10 0 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 1120 0.563446141830053 Inf 11 0 11 0 gtcagctgag 1121 0.563446141830053 Inf 10 0 10 0 NM_028680 refGene chr16 50083307 + 54171 graph_last l 20 58 gtgattatga 1122 0.563446141830053 Inf 10 0 10 0 NM_009468 refGene chr18 43986451 - 64437 graph_last 0 11 gtgctttcat 1123 0.563446141830053 Inf 10 0 10 0 NM_008297 refGene chr10 59695541 + 12599 graph_last 0 13 gtggaaaatg 1124 0.563446141830053 Inf 11 0 11 0 NM_010607 refGene chr1 192870991 - 9533 graph_last l 5 47 gtgggatgta 1125 0.563446141830053 Inf 11 0 11 0 AK122429 knownGene chr8 80319227 + 131527 graph_last l 5 36 gtgtgatgct 1126 0.563446141830053 Inf 10 0 10 0 NM_017479 refGene chr14 16552888 + 39540 graph_last 10 39 taaaaaagca 1127 0.563446141830053 Inf 11 0 11 0 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 1128 0.563446141830053 Inf 11 0 11 0 taaataaatg 1129 0.563446141830053 Inf 10 0 10 0 taagaagcag 1130 0.563446141830053 Inf 10 0 10 0 AK083512 knownGene chr8 86533231 - 131951 graph_last l 15 54 taagaattct 1131 0.563446141830053 Inf 10 0 10 0 NM_025902 refGene chr3 139272492 - 89575 graph_last l 27 76 taagagctat 1132 0.563446141830053 Inf 10 0 10 0 genomic chr12 3277651 + 0 unique_long l 10 36 tatttattga 1133 0.563446141830053 Inf 10 0 10 0 NM_182650 refGene chr6 51936949 + 112726 graph_last l 5 29 tcacctgaaa 1134 0.563446141830053 Inf 10 0 10 0 NM_023040 refGene chr17 24287017 - 57817 graph_last l 17 55 tcagcagagg 1135 0.563446141830053 Inf 10 0 10 0 NM_133872 refGene chr4 135330172 - 98179 graph_last l 17 49 tcatcagcta 1136 0.563446141830053 Inf 10 0 10 0 NM_021535 refGene chr4 40784770 - 92391 graph_last l 12 70 tctgcgtcct 1137 0.563446141830053 Inf 11 0 11 0 NM_025650 refGene chr10 82754685 - 14090 graph_last l 6 34 tctgtttctg 1138 0.563446141830053 Inf 11 0 11 0 NM_138657 refGene chr11 96982105 + 23518 graph_last 38 90 tctttttggg 1139 0.563446141830053 Inf 10 0 10 0 NM_008520 refGene chr19 5616248 - 67589 graph_last l 48 115 tgagcctggt 1140 0.563446141830053 Inf 11 0 11 0 NM_080844 refGene chr1 164569762 - 7788 graph_last l 2 21 tgagtggttt 1141 0.563446141830053 Inf 10 0 10 0 NM_025985 refGene chr11 72257703 + 21283 graph_last l 5 25 tgatgggtgc 1142 0.563446141830053 Inf 11 0 11 0 tgccaagggt 1143 0.563446141830053 Inf 11 0 11 0 NM_019837 refGene chr17 27213812 - 58135 graph_second l 12 59 tgcgatgaaa 1144 0.563446141830053 Inf 10 0 10 0 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 1145 0.563446141830053 Inf 11 0 11 0 NM_008244 refGene chr11 120036784 + 25564 graph_last l 23 74 tggctcctgc 1146 0.563446141830053 Inf 10 0 10 0 tggtcaggat 1147 0.563446141830053 Inf 11 0 11 0 NM_133763 refGene chr2 165381905 + 81307 graph_last l 16 76 tggttctgtt 1148 0.563446141830053 Inf 11 0 11 0 tggttcttga 1149 0.563446141830053 Inf 10 0 10 0 tgtaaataaa 1150 0.563446141830053 Inf 10 0 10 0 tgtataaaaa 1151 0.563446141830053 0.73469387755102 108 147 113 51 NM_025435 refGene chr14 9281192 - 39116 graph_last l 26 86 tgtcgttcat 1152 0.563446141830053 Inf 11 0 11 0 NM_178718 refGene chr15 68198891 + 47652 graph_last l 9 43 ttaaaactga 1153 0.563446141830053 Inf 10 0 10 0 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 1154 0.563446141830053 Inf 10 0 10 0 ttatttgtat 1155 0.563446141830053 Inf 10 0 10 0 NM_009166 refGene chr19 40425656 - 69723 graph_last l 97 148 ttgagttact 1156 0.563446141830053 Inf 10 0 10 0 NM_025303 refGene chr1 16398839 - 594 graph_last l 17 47 ttggaatcca 1157 0.563446141830053 Inf 11 0 11 0 NM_024212 refGene chr9 66553110 - 138568 graph_last 4 39 tttgatttat 1158 0.563446141830053 Inf 11 0 11 0 NM_153581 refGene chr8 55142237 + 130191 graph_last l 380 809 gagtgctttg 1159 0.565430652818604 1.58181818181818 87 55 91 19 gactgaatct 1160 0.567821244259455 2.5 30 12 31 4 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 1161 0.567821244259455 2.5 30 12 31 4 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 1162 0.576951234774141 0.724409448818898 92 127 96 44 ctgaacatct 1163 0.579908811967078 1.42105263157895 135 95 141 33 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 1164 0.58061320635506 0.6 33 55 34 19 ttggtgaagg 1165 0.605863652583023 0.829545454545455 292 352 305 122 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 1166 0.606010400219417 0.58695652173913 27 46 28 16 gagacggtgc 1167 0.608752543727459 0.5 16 32 17 11 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 1168 0.616044876401696 2.77777777777778 25 9 26 3 NM_021448 refGene chr18 25268369 + 63413 graph_last l 49 141 ctgtcaaaga 1169 0.616044876401696 2.77777777777778 25 9 26 3 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 1170 0.616044876401696 2.77777777777778 25 9 26 3 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 1171 0.618397990449794 1.82758620689655 53 29 55 10 NM_009898 refGene chr7_random 46673618 + 127457 graph_last 17 51 acagtgccta 1172 0.619205149452754 0.352941176470588 6 17 6 6 cagacggaag 1173 0.619205149452754 0.352941176470588 6 17 6 6 NM_007638 refGene chr6 86813362 - 114502 graph_last l 24 80 ccttattgtg 1174 0.619205149452754 0.352941176470588 6 17 6 6 AK122380 knownGene chr8 84801596 + 131761 graph_last l 67 149 ctacagttcc 1175 0.619205149452754 0.352941176470588 6 17 6 6 NM_023336 refGene chr2 27717027 - 73019 graph_last l 8 51 ggaaccagcc 1176 0.619205149452754 0.352941176470588 6 17 6 6 gtttcaagag 1177 0.619205149452754 0.352941176470588 6 17 6 6 tgggtgtccc 1178 0.619205149452754 0.352941176470588 6 17 6 6 NM_025942 refGene chr2 73487585 - 75725 graph_last l 38 80 ttttacagta 1179 0.619205149452754 0.352941176470588 6 17 6 6 atagacgcaa 1180 0.6222217003761 1.86206896551724 54 29 56 10 cacgctcccg 1181 0.637360405125168 0.45 9 20 9 7 NM_019831 refGene chrX 91306980 - 150325 graph_last l 22 69 cccacccttg 1182 0.637360405125168 0.45 9 20 9 7 NM_010890 refGene chr9 75258934 + 139403 graph_last l 4 62 aaaacatctc 1183 0.64039109788663 5 15 3 16 1 NM_009786 refGene chr1 163743500 - 7720 graph_last b 19 109 acgcgaaaac 1184 0.64039109788663 5 15 3 16 1 NM_019400 refGene chr11 70549148 - 21202 graph_last l 73 202 atgatggaca 1185 0.64039109788663 5 15 3 16 1 NM_029402 refGene chr18 3435862 + 62399 graph_last l 29 108 atgttgctgc 1186 0.64039109788663 5 15 3 16 1 caacaaaacc 1187 0.64039109788663 3.33333333333333 20 6 21 2 NM_026467 refGene chr9 69425322 + 138888 graph_last l 20 143 cacagactgt 1188 0.64039109788663 5 15 3 16 1 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 1189 0.64039109788663 3.33333333333333 20 6 21 2 ccacactgtc 1190 0.64039109788663 5 15 3 16 1 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 1191 0.64039109788663 5 15 3 16 1 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 1192 0.64039109788663 3.33333333333333 20 6 21 2 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 1193 0.64039109788663 5 15 3 16 1 NM_172768 refGene chr9 41413125 - 136743 graph_last l 39 128 gaagtccagt 1194 0.64039109788663 3.33333333333333 20 6 21 2 AK028542 knownGene chr1 139190833 - 6589 graph_last l 26 97 gcaccaactg 1195 0.64039109788663 3.33333333333333 20 6 21 2 NM_011666 refGene chr6 98839950 - 115335 graph_last 30 83 gctgttcaaa 1196 0.64039109788663 5 15 3 16 1 gttgaagtaa 1197 0.64039109788663 5 15 3 16 1 tacctattgt 1198 0.64039109788663 3.33333333333333 20 6 21 2 NM_019979 refGene chr14 24510980 + 40008 graph_last l 22 151 tatttagtcc 1199 0.64039109788663 3.33333333333333 20 6 21 2 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 1200 0.64039109788663 3.33333333333333 20 6 21 2 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 1201 0.64039109788663 5 15 3 16 1 NM_022319 refGene chr9 99839060 - 140594 graph_last l 35 99 ttggtggtca 1202 0.64039109788663 3.33333333333333 20 6 21 2 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 1203 0.64039109788663 1.375 143 104 149 36 tgctgagaat 1204 0.648830057892534 1.68421052631579 64 38 67 13 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 1205 0.649789579401374 0.67816091954023 59 87 62 30 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 1206 0.664337413549447 0.448275862068966 13 29 14 10 ctggggtggg 1207 0.664337413549447 0.448275862068966 13 29 14 10 aaaaagggtt 1208 0.668544727424737 0.222222222222222 2 9 2 3 NM_010808 refGene chr2 156443008 + 80684 graph_last l 5 21 aaactcctgt 1209 0.668544727424737 0.222222222222222 2 9 2 3 aaataaaaca 1210 0.668544727424737 2.35714285714286 33 14 34 5 aaatgtgaat 1211 0.668544727424737 0.222222222222222 2 9 2 3 NM_144516 refGene chr13 9920954 - 32574 graph_last l 25 73 aacgtgaggt 1212 0.668544727424737 0.222222222222222 2 9 2 3 BI080296 all_est chr4 44395266 - 92807 graph_last l 9 49 aactccaccc 1213 0.668544727424737 0.222222222222222 2 9 2 3 NM_026383 refGene chr4 134650829 - 98090 graph_last 1 14 aactgttttt 1214 0.668544727424737 0.222222222222222 2 9 2 3 NM_026165 refGene chr18_random 1519575 + 66799 graph_last l 17 28 aagtaaggtg 1215 0.668544727424737 0.222222222222222 2 9 2 3 NM_025794 refGene chr3 81428166 - 86145 graph_last l 9 45 aagtatttgt 1216 0.668544727424737 0.222222222222222 2 9 2 3 aagtgatggc 1217 0.668544727424737 0.222222222222222 2 9 2 3 AF133818 knownGene chr3 161696867 + 90649 graph_last 0 50 aatttaagtg 1218 0.668544727424737 0.222222222222222 2 9 2 3 NM_025789 refGene chr17 7422402 + 56847 graph_last 7 49 acccatccag 1219 0.668544727424737 0.222222222222222 2 9 2 3 NM_030245 refGene chr1 169990731 - 8174 graph_last l 7 32 accgtgactc 1220 0.668544727424737 0.222222222222222 2 9 2 3 NM_008165 refGene chr11 56927756 + 20133 graph_last l 35 102 actccgggga 1221 0.668544727424737 0.222222222222222 2 9 2 3 agagtgagga 1222 0.668544727424737 0.222222222222222 2 9 2 3 NM_008687 refGene chr4 80899931 + 94453 graph_last l 2 27 agctggtggt 1223 0.668544727424737 0.222222222222222 2 9 2 3 BX631115 all_est chr13 46275336 - 34561 graph_last l 17 31 aggaacagat 1224 0.668544727424737 0.222222222222222 2 9 2 3 NM_026498 refGene chr7 71266031 - 122278 graph_last l 23 63 agggagtggg 1225 0.668544727424737 0.222222222222222 2 9 2 3 BC046438 knownGene chr13 71509181 + 36073 graph_last l 9 20 atgatgtgca 1226 0.668544727424737 0.222222222222222 2 9 2 3 AU256308 all_est chr4 53386347 + 93312 graph_last l 4 17 atgtattcag 1227 0.668544727424737 0.222222222222222 2 9 2 3 atgtttgtgc 1228 0.668544727424737 0.222222222222222 2 9 2 3 NM_144800 refGene chr15 60223519 + 47251 graph_last l 3 13 attattagaa 1229 0.668544727424737 0.222222222222222 2 9 2 3 caaatgaggc 1230 0.668544727424737 0.222222222222222 2 9 2 3 caagaccctg 1231 0.668544727424737 0.222222222222222 2 9 2 3 cagacagaac 1232 0.668544727424737 0.222222222222222 2 9 2 3 NM_178597 refGene chr14 15621704 - 39454 graph_last l 61 164 cagccctccc 1233 0.668544727424737 0.222222222222222 2 9 2 3 cagctttgct 1234 0.668544727424737 0.222222222222222 2 9 2 3 NM_177581 refGene chr5_random 18880823 + 109360 graph_last l 3 10 cattaacctt 1235 0.668544727424737 0.222222222222222 2 9 2 3 NM_028967 refGene chr19 6179959 - 67652 graph_last l 47 89 ccaaaaggaa 1236 0.668544727424737 0.222222222222222 2 9 2 3 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 1237 0.668544727424737 1.88461538461538 49 26 51 9 NM_177751 refGene chrX 145856339 - 152396 graph_last l 18 32 ccaggcttta 1238 0.668544727424737 0.222222222222222 2 9 2 3 NM_023556 refGene chr5 113388856 + 106093 graph_last 2 48 ccgactgcct 1239 0.668544727424737 0.222222222222222 2 9 2 3 genomic chr7 52539336 + 0 unique_long l 4 15 ccgcttggac 1240 0.668544727424737 0.222222222222222 2 9 2 3 cctttggcaa 1241 0.668544727424737 2.42857142857143 34 14 35 5 cgccgccggc 1242 0.668544727424737 1.44 108 75 113 26 NM_020009 refGene chr4 146670510 + 99166 graph_last l 13 33 cggggccaca 1243 0.668544727424737 0.222222222222222 2 9 2 3 ctgctagcac 1244 0.668544727424737 0.222222222222222 2 9 2 3 cttcccactg 1245 0.668544727424737 0.222222222222222 2 9 2 3 NM_007575 refGene chr16 10024134 - 51425 graph_last l 16 44 cttccctggc 1246 0.668544727424737 0.222222222222222 2 9 2 3 cttcttgtgt 1247 0.668544727424737 0.222222222222222 2 9 2 3 NM_007727 refGene chr15 94185949 + 49433 graph_last l 34 87 ctttaagatg 1248 0.668544727424737 0.222222222222222 2 9 2 3 gaagaattct 1249 0.668544727424737 0.222222222222222 2 9 2 3 gaattggaag 1250 0.668544727424737 0.222222222222222 2 9 2 3 NM_133708 refGene chr1 76993848 + 3708 graph_last l 7 25 gacagtgaga 1251 0.668544727424737 0.222222222222222 2 9 2 3 NM_016863 refGene chr12 4873131 - 26045 graph_last l 4 18 gagggacttg 1252 0.668544727424737 0.222222222222222 2 9 2 3 gcaactgggc 1253 0.668544727424737 0.222222222222222 2 9 2 3 NM_053078 refGene chr18 33627441 + 63718 graph_last 0 6 gcacttatta 1254 0.668544727424737 0.222222222222222 2 9 2 3 genomic chr2 25849684 - 0 unique_long l 27 98 gcagcatctg 1255 0.668544727424737 0.222222222222222 2 9 2 3 NM_009010 refGene chr8 85693946 + 131851 graph_last l 10 59 gccaagatgc 1256 0.668544727424737 0.222222222222222 2 9 2 3 gccgactaaa 1257 0.668544727424737 0.222222222222222 2 9 2 3 gcctctgcct 1258 0.668544727424737 0.222222222222222 2 9 2 3 gcggcgccgc 1259 0.668544727424737 0.222222222222222 2 9 2 3 gcgtaaaaga 1260 0.668544727424737 0.222222222222222 2 9 2 3 genomic chr1 81489580 - 0 unique_long l 4 20 gctaacaagg 1261 0.668544727424737 0.222222222222222 2 9 2 3 gctaaccacc 1262 0.668544727424737 0.222222222222222 2 9 2 3 NM_011655 refGene chr17 35505345 + 58992 graph_last 0 17 gctacggttt 1263 0.668544727424737 0.222222222222222 2 9 2 3 gctcctcccc 1264 0.668544727424737 0.222222222222222 2 9 2 3 NM_178650 refGene chr19 3999389 + 67381 graph_last l 190 473 gctggcagcc 1265 0.668544727424737 2.35714285714286 33 14 34 5 gctgggcggg 1266 0.668544727424737 0.222222222222222 2 9 2 3 NM_133697 refGene chr5 65008285 + 103345 graph_last l 27 57 ggatgtagag 1267 0.668544727424737 0.222222222222222 2 9 2 3 AK129173 knownGene chr10_random 86612 + 16995 graph_last 15 59 ggcaccgcag 1268 0.668544727424737 0.222222222222222 2 9 2 3 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 1269 0.668544727424737 0.222222222222222 2 9 2 3 ggctggttga 1270 0.668544727424737 0.222222222222222 2 9 2 3 gggcctgctc 1271 0.668544727424737 0.222222222222222 2 9 2 3 NM_178675 refGene chr10 55088948 + 12397 graph_last l 13 43 ggtaggagtc 1272 0.668544727424737 0.222222222222222 2 9 2 3 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 1273 0.668544727424737 0.222222222222222 2 9 2 3 gtgggcgtgt 1274 0.668544727424737 0.67948717948718 53 78 55 27 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 1275 0.668544727424737 1.88461538461538 49 26 51 9 NM_146008 refGene chr10 86935884 + 14433 graph_last l 3 18 gttgttttat 1276 0.668544727424737 0.222222222222222 2 9 2 3 NM_172674 refGene chr2 156913705 + 80749 graph_last l 10 36 tacagactcg 1277 0.668544727424737 0.222222222222222 2 9 2 3 genomic chr5 120593837 + 0 unique_long l 2 17 tacatcatca 1278 0.668544727424737 0.222222222222222 2 9 2 3 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 1279 0.668544727424737 2.35714285714286 33 14 34 5 NM_019658 refGene chr19 53788622 - 70518 graph_second l 12 28 tagttccttc 1280 0.668544727424737 0.222222222222222 2 9 2 3 NM_011404 refGene chr8 123727366 - 134074 graph_last l 10 50 tcactgccct 1281 0.668544727424737 0.222222222222222 2 9 2 3 tccagaggcc 1282 0.668544727424737 0.222222222222222 2 9 2 3 tcctataaag 1283 0.668544727424737 0.222222222222222 2 9 2 3 NM_009149 refGene chr8 112789992 - 133441 graph_last l 34 122 tcctcggtgt 1284 0.668544727424737 0.222222222222222 2 9 2 3 tctaccatcc 1285 0.668544727424737 0.222222222222222 2 9 2 3 NM_028475 refGene chr3 92414398 - 86875 graph_last l 4 13 tctgtcccat 1286 0.668544727424737 0.222222222222222 2 9 2 3 AK049571 all_mrna chr17 84592004 - 61688 graph_second 0 33 tctgtttgtc 1287 0.668544727424737 0.222222222222222 2 9 2 3 NM_020585 refGene chr8 22108700 - 128582 graph_last 20 58 tcttagctca 1288 0.668544727424737 0.222222222222222 2 9 2 3 NM_198610 refGene chr4 138900938 - 98461 graph_last l 29 73 tcttggcttc 1289 0.668544727424737 0.222222222222222 2 9 2 3 tgattgttgg 1290 0.668544727424737 0.222222222222222 2 9 2 3 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 1291 0.668544727424737 0.222222222222222 2 9 2 3 NM_011749 refGene chr16 33232157 + 53033 graph_last l 4 15 tgctacctag 1292 0.668544727424737 0.222222222222222 2 9 2 3 genomic chr4 105908480 - 0 unique_long l 19 43 tggaaagggt 1293 0.668544727424737 0.222222222222222 2 9 2 3 tggctcggtc 1294 0.668544727424737 0.761006289308176 121 159 126 55 NM_172372 refGene chrX 6291577 + 147030 graph_last 33 178 tggggctggc 1295 0.668544727424737 0.434782608695652 10 23 10 8 NM_023326 refGene chr2 25973946 + 72877 graph_last l 20 61 ttaactgcct 1296 0.668544727424737 0.222222222222222 2 9 2 3 NM_025673 refGene chr15 12386785 + 45378 graph_last l 15 49 ttaatagtgg 1297 0.668544727424737 0.222222222222222 2 9 2 3 AK029707 knownGene chrX 125528359 - 151570 graph_last 23 61 ttaggcagct 1298 0.668544727424737 0.222222222222222 2 9 2 3 NM_029626 refGene chr14 25551429 - 40096 graph_last 10 39 ttataaattc 1299 0.668544727424737 0.222222222222222 2 9 2 3 ttatctgtgt 1300 0.668544727424737 0.222222222222222 2 9 2 3 ttatgggaat 1301 0.668544727424737 0.222222222222222 2 9 2 3 ttcactcagt 1302 0.668544727424737 0.222222222222222 2 9 2 3 ttctaagaag 1303 0.668544727424737 0.222222222222222 2 9 2 3 NM_173780 refGene chrX 141691790 + 152251 graph_last 1 7 ttctgtctga 1304 0.668544727424737 0.222222222222222 2 9 2 3 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 1305 0.668544727424737 0.222222222222222 2 9 2 3 NM_026661 refGene chr2 157193613 + 80777 graph_last l 7 25 tttctggtgt 1306 0.668544727424737 0.222222222222222 2 9 2 3 NM_016759 refGene chr11 102067093 - 24069 graph_last l 37 69 tttgttatag 1307 0.668544727424737 0.222222222222222 2 9 2 3 atggtgatgt 1308 0.668754864163904 0.411764705882353 7 17 7 6 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 1309 0.668754864163904 0.411764705882353 7 17 7 6 ggcaatcacc 1310 0.668754864163904 0.411764705882353 7 17 7 6 ggggtggggg 1311 0.668754864163904 0.411764705882353 7 17 7 6 NM_027439 refGene chrX 11164881 + 147275 graph_last l 143 350 tgcaaatgga 1312 0.668754864163904 0.411764705882353 7 17 7 6 ttacagaaat 1313 0.668754864163904 0.411764705882353 7 17 7 6 ttcattctag 1314 0.668754864163904 0.411764705882353 7 17 7 6 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 1315 0.677824849595933 1.65714285714286 58 35 61 12 attttttttc 1316 0.696450615054735 0.478260869565217 11 23 11 8 NM_133796 refGene chr11 120131623 - 25586 graph_last l 54 208 tgctctccct 1317 0.696450615054735 0.478260869565217 11 23 11 8 cagatctttg 1318 0.698519002523455 0.666666666666667 48 72 50 25 NM_178721 refGene chr16 67401895 - 54849 graph_last l 9 59 aaatattcca 1319 0.707171600487943 0.333333333333333 4 12 4 4 NM_008198 refGene chr17 34516598 + 58890 graph_last l 9 34 aagctggatt 1320 0.707171600487943 0.333333333333333 4 12 4 4 NM_173071 refGene chr4 128932627 + 97545 graph_last l 18 90 aagctgggct 1321 0.707171600487943 0.333333333333333 4 12 4 4 NM_020027 refGene chr17 34814955 - 58932 graph_last 15 63 aaggggaaag 1322 0.707171600487943 0.333333333333333 4 12 4 4 NM_011543 refGene chr11 51871817 - 19827 graph_last l 19 86 aagtaagtgt 1323 0.707171600487943 0.333333333333333 4 12 4 4 NM_013510 refGene chr2 157168721 + 80770 graph_last l 17 64 agcaacatca 1324 0.707171600487943 0.333333333333333 4 12 4 4 U65636 knownGene chr3 97587933 + 87247 graph_last l 2 26 aggccgctgg 1325 0.707171600487943 0.333333333333333 4 12 4 4 aggcctggct 1326 0.707171600487943 0.333333333333333 4 12 4 4 NM_008881 refGene chr6 90767660 - 114864 graph_last l 4 28 attagctgtc 1327 0.707171600487943 0.333333333333333 4 12 4 4 NM_011522 refGene chr17 24278928 - 57816 graph_last l 31 63 attgtgtatt 1328 0.707171600487943 0.333333333333333 4 12 4 4 NM_178694 refGene chr2 30371895 - 73220 graph_last l 34 102 cagcacttgg 1329 0.707171600487943 0.333333333333333 4 12 4 4 caggaaagct 1330 0.707171600487943 0.333333333333333 4 12 4 4 NM_145422 refGene chr10 88338778 - 14527 graph_last l 50 161 ctattaaata 1331 0.707171600487943 2.41666666666667 29 12 30 4 ctggaagagg 1332 0.707171600487943 0.333333333333333 4 12 4 4 ctggagctag 1333 0.707171600487943 0.333333333333333 4 12 4 4 gaggcctctg 1334 0.707171600487943 0.333333333333333 4 12 4 4 gccagggcca 1335 0.707171600487943 0.333333333333333 4 12 4 4 NM_148934 refGene chr10 81979365 + 13981 graph_last l 24 113 gcccgcgagg 1336 0.707171600487943 0.333333333333333 4 12 4 4 gcctcccctt 1337 0.707171600487943 0.333333333333333 4 12 4 4 NM_178880 refGene chr16 93083526 + 56030 graph_last l 24 166 gcggccgaca 1338 0.707171600487943 0.333333333333333 4 12 4 4 NM_133971 refGene chr8 12323570 - 127998 graph_last l 3 32 gcgtggcagg 1339 0.707171600487943 0.333333333333333 4 12 4 4 ggtttgctca 1340 0.707171600487943 0.333333333333333 4 12 4 4 NM_030019 refGene chr15 90975517 - 49256 graph_last l 86 162 gtacagccct 1341 0.707171600487943 0.333333333333333 4 12 4 4 NM_144926 refGene chr7 119036606 + 125141 graph_last l 25 64 gtacattcca 1342 0.707171600487943 0.333333333333333 4 12 4 4 NM_144528 refGene chr10 82062156 - 13989 graph_last l 14 41 gtctgtggag 1343 0.707171600487943 0.333333333333333 4 12 4 4 NM_019649 refGene chr7 16587669 - 119324 graph_last l 31 100 gtgaagccaa 1344 0.7071716004