gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_B6HYPO_SEQS.COUNT_B6HYPO_1.COUNT_B6Hypo_2.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count COUNT_B6HYPO_SEQS.COUNT_B6HYPO_1.COUNT_B6Hypo_2.TAG.count NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 1 7.09166539134515e-165 0.00190114068441065 1 526 1 529 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 2 7.80410394178724e-122 6.26356589147287 808 129 894 130 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 3 2.53604925294375e-110 10 580 58 642 58 ccttgctcaa 4 2.50515726386396e-71 0.155021834061135 71 458 79 461 tgggttgtct 5 8.48451107452885e-58 3.4021164021164 643 189 711 190 ttggtgaagg 6 3.8633734371569e-54 9.51612903225806 295 31 326 31 gtggctcaca 7 9.16308546530705e-52 0.461267605633803 524 1136 580 1142 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 8 2.86177087456432e-50 91 182 2 201 2 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 9 8.00410217381667e-48 0.202702702702703 75 370 83 372 gcccccctct 10 9.81356359796856e-48 0.0273224043715847 5 183 6 184 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 11 1.24773723947488e-45 0.0333333333333333 6 180 7 181 tgtagtgtaa 12 1.33724828462033e-45 4.6625 373 80 413 80 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 13 1.98428953042773e-44 0 0 144 0 145 agaaggaggt 14 2.37317609153890e-40 7.625 244 32 270 32 gtgacctggc 15 3.17772541841074e-40 0.0205479452054795 3 146 3 147 cctttaatcc 16 2.54176251085211e-38 0.178438661710037 48 269 53 271 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 17 4.56105644527454e-37 0.0347222222222222 5 144 5 145 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 18 8.52007519145765e-37 16.8 168 10 186 10 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 19 1.38850270433271e-36 0.0222222222222222 3 135 3 136 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 20 3.08342244459515e-36 0.0291970802919708 4 137 4 138 NM_008614 refGene chr9 122556298 + 142162 graph_last b 88 767 cgcagcgttg 21 2.79233898440113e-35 0 0 115 0 116 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 22 4.01859253816963e-34 0.0596026490066225 9 151 10 152 tggatcagtc 23 8.65924408050831e-33 3.85542168674699 320 83 354 83 cacacacaca 24 1.10838308456066e-32 0.0170940170940171 2 117 2 118 tgtactcaat 25 1.45732789006192e-32 6.9 207 30 229 30 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 26 1.47883631304543e-30 0.162561576354680 33 203 36 204 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 27 4.54183279605465e-29 0.139664804469274 25 179 28 180 NM_009242 refGene chr11 55019713 - 20083 graph_last l 148 698 caaactctca 28 9.57804913023045e-29 0.0353982300884956 4 113 4 114 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 29 1.99858825063450e-26 0.0297029702970297 3 101 3 102 aatgacctgg 30 1.48831433547639e-25 19.1666666666667 115 6 127 6 ggatttggct 31 4.25727100458372e-25 4.42857142857143 217 49 240 49 attggcccca 32 8.00668852375327e-25 0 0 83 0 83 gcaataaatg 33 1.00411770790519e-24 12.4 124 10 137 10 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 34 1.13421811892056e-24 0.0485436893203883 5 103 5 104 gcctaatgta 35 1.21904053037582e-24 3.44303797468354 272 79 301 79 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 36 3.14937448344133e-24 0 0 81 0 81 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 37 1.91007121464002e-23 0.153333333333333 23 150 25 151 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 38 3.86667689131093e-23 Inf 81 0 90 0 ggcttcggtc 39 6.17016046605673e-23 2.57142857142857 378 147 418 148 gaacattgca 40 4.47691388817967e-21 0.0246913580246914 2 81 2 81 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 41 5.69901859403891e-21 0.0555555555555556 5 90 5 91 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 42 1.44768982931919e-20 0.20125786163522 32 159 35 160 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 43 4.09220948736597e-20 0 0 68 0 68 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 44 4.51267411786519e-20 0.122807017543860 14 114 15 115 gccttccaat 45 6.129169935655e-20 6.22727272727273 137 22 151 22 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 46 6.129169935655e-20 0.120689655172414 14 116 16 117 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 47 7.87768977829635e-20 0 0 67 0 67 gtctgctgat 48 1.32506350400595e-19 5.40740740740741 146 27 162 27 taaagaggcc 49 1.38892428876953e-19 4.16279069767442 179 43 198 43 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 50 1.55703908004156e-19 0 0 66 0 66 gaatgatctg 51 2.61365977227202e-19 Inf 68 0 75 0 genomic chr2 103005141 + 0 unique_long l 172 342 caggtgagcc 52 6.60774042852978e-19 0 0 64 0 64 tttttaatgt 53 1.70550458894137e-18 5.14285714285714 144 28 159 28 NM_022417 refGene chr1 87790773 + 4273 graph_last l 184 778 gtagtggagc 54 2.56587168140236e-18 0.130841121495327 14 107 15 108 aaaaaaaaaa 55 3.08593635305389e-18 0.518867924528302 275 530 304 533 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 56 3.86921611953322e-18 4.71875 151 32 167 32 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 57 4.88470738708434e-18 36.5 73 2 81 2 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 58 5.49750413083459e-18 0 0 61 0 61 attctccagt 59 8.2388915197053e-18 3.58490566037736 190 53 210 53 tgaccccggg 60 8.2388915197053e-18 2.75257731958763 267 97 295 98 tcaaacttgg 61 1.28493716093325e-16 4.96296296296296 134 27 148 27 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 62 4.41625854534677e-16 0 0 55 0 55 gattccgtga 63 4.93280208480019e-16 3.18032786885246 194 61 215 61 tgtgtgaggt 64 6.53416454089992e-16 23.3333333333333 70 3 77 3 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 65 8.85280059537606e-16 0 0 54 0 54 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 66 1.01120922753002e-15 Inf 56 0 62 0 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 67 3.78943846949759e-15 0 0 52 0 52 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 68 4.02763948072626e-15 22.3333333333333 67 3 74 3 ggatggggag 69 6.53927242903073e-15 9.33333333333333 84 9 93 9 NM_009790 refGene chr12 95767982 + 30604 graph_last l 461 1256 acaaacttag 70 7.2290735159898e-15 0.275641025641026 43 156 48 157 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 71 7.44939738787786e-15 11.2857142857143 79 7 87 7 aagagaaacc 72 1.16343008533216e-14 0.0338983050847458 2 59 2 59 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 73 2.31237224188451e-14 0.0185185185185185 1 54 1 54 gtgctgccag 74 3.14021159024089e-14 0 0 49 0 49 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 75 3.14021159024089e-14 30.5 61 2 67 2 ttaatcccaa 76 4.58342507497184e-14 0.0188679245283019 1 53 1 53 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 77 5.7725950791054e-14 29.5 59 2 65 2 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 78 6.34417260955588e-14 0 0 48 0 48 NM_007883 refGene chr18 20972896 + 63182 graph_last 140 717 aattcgcgga 79 9.09574341361611e-14 0.0192307692307692 1 52 1 52 cagcatcacc 80 9.9971563015729e-14 5.82352941176471 99 17 109 17 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 81 1.10582259202056e-13 9.625 77 8 85 8 NM_019444 refGene chr19 5660215 - 67592 graph_last l 63 144 aaggcttatt 82 1.25300375697086e-13 0 0 47 0 47 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 83 1.25300375697086e-13 0 0 47 0 47 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 84 1.57735930161898e-13 0.095890410958904 7 73 8 73 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 85 1.81430762373640e-13 28.5 57 2 63 2 CD352670 all_est chr5 122023911 - 106823 graph_last l 33 377 aacttaaaaa 86 2.40857082496618e-13 0.142857142857143 12 84 13 84 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 87 3.51144663257509e-13 0.02 1 50 1 50 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 88 3.52495924339109e-13 3.11320754716981 165 53 183 53 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 89 3.86675403885735e-13 0.0793650793650794 5 63 5 63 cctttgtgac 90 4.67025220659639e-13 0.128205128205128 10 78 11 78 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 91 5.04544105609276e-13 52 52 1 57 1 NM_028224 refGene chr15 101529366 + 49935 graph_last l 37 211 cacccggcca 92 5.04544105609276e-13 0 0 45 0 45 ctgtaggtga 93 5.18085615328611e-13 3.22916666666667 155 48 172 48 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 94 5.99806145147051e-13 0.0377358490566038 2 53 2 53 gggttggccg 95 1.01542805516507e-12 0 0 44 0 44 gctttgaatg 96 1.08285245063561e-12 6.28571428571429 88 14 97 14 ggcaagcccc 97 1.50782551335166e-12 2.86885245901639 175 61 194 61 ctagtctttg 98 1.96334077245239e-12 1.94565217391304 358 184 396 185 NM_007687 refGene chr19 5351164 + 67562 graph_last 686 2388 gaagcaggac 99 2.77769411971629e-12 2.41052631578947 229 95 253 96 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 100 3.31414714475358e-12 0.0555555555555556 3 54 3 54 aaacccccaa 101 4.21482332064611e-12 0 0 42 0 42 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 102 5.07907529363583e-12 18.6666666666667 56 3 62 3 taaaccactg 103 8.02562036128468e-12 0.0714285714285714 4 56 4 56 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 104 8.42987251609297e-12 2.83050847457627 167 59 185 59 gaggctttgc 105 8.97104477223997e-12 0.0862068965517241 5 58 5 58 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 106 9.56461536316356e-12 0.106060606060606 7 66 8 66 gtgaaactaa 107 1.57431641910774e-11 2.20869565217391 254 115 281 116 NM_177407 refGene chr18 61115520 + 65252 graph_second l 54 149 ctccgtccaa 108 1.73945101459668e-11 0 0 40 0 40 aagaggcaag 109 2.76114008462465e-11 4.61904761904762 97 21 107 21 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 110 4.4711339930905e-11 0.121212121212121 8 66 9 66 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 111 5.12016987175808e-11 Inf 41 0 45 0 ctgaacatct 112 5.71175207045555e-11 3.52941176470588 120 34 133 34 cacaaacggt 113 8.8784752311799e-11 3.11363636363636 137 44 151 44 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 114 9.8157681686656e-11 Inf 40 0 44 0 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 115 1.0443909394226e-10 11.4 57 5 63 5 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 116 1.30370343516246e-10 0.0444444444444444 2 45 2 45 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 117 1.71972399851387e-10 0.024390243902439 1 41 1 41 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 118 1.76632005932902e-10 7.44444444444444 67 9 74 9 atcctggtaa 119 1.78877027836446e-10 0.230769230769231 21 91 23 92 gcagggtggg 120 1.83836574768502e-10 Inf 39 0 43 0 gcccgggaat 121 2.51294988700170e-10 2.05426356589147 265 129 293 130 gttgctgaga 122 2.51294988700170e-10 3.72413793103448 108 29 119 29 genomic chr19 5654498 - 0 unique_long l 9 58 gtcggttttg 123 2.95016969389521e-10 0 0 36 0 36 tgtgtcaacc 124 2.95016969389521e-10 0.273584905660377 29 106 32 107 gggagggagg 125 3.30338131708509e-10 0.025 1 40 1 40 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 126 3.37114288034192e-10 0.0943396226415094 5 53 5 53 gaaaatgaga 127 3.40163189461341e-10 Inf 38 0 42 0 gggaagtctg 128 3.40163189461341e-10 Inf 38 0 42 0 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 129 3.9105012787172e-10 0.149253731343284 10 67 11 67 NM_153574 refGene chr6 59412621 - 113148 graph_last 1 168 accaaaaaaa 130 4.68277110173573e-10 0.0465116279069767 2 43 2 43 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 131 5.21345663895737e-10 16 48 3 53 3 tgactgggag 132 5.62283067317249e-10 0.118644067796610 7 59 8 59 genomic chr5 92466331 - 0 unique_long l 31 107 cccactgagt 133 5.77938716811309e-10 0 0 35 0 35 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 134 6.24699720951144e-10 3.80769230769231 99 26 110 26 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 135 6.27381199648644e-10 0.0256410256410256 1 39 1 39 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 136 6.32509928466658e-10 Inf 37 0 41 0 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 137 7.7511197858056e-10 0.209876543209877 17 81 19 81 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 138 8.1631741531115e-10 9.33333333333333 56 6 62 6 tgcccagtgc 139 9.78903951937133e-10 0.0943396226415094 5 53 6 53 ccagaacaga 140 9.81376860189488e-10 2.32926829268293 191 82 211 82 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 141 1.03762058388400e-09 0.281553398058252 29 103 32 104 gatgtggctg 142 1.20048564925791e-09 3.25 117 36 129 36 attgtttatg 143 1.3201251333745e-09 4.9375 79 16 87 16 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 144 1.57983371230778e-09 15.3333333333333 46 3 51 3 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 145 1.61681435879899e-09 6.5 65 10 72 10 cgccgccggc 146 1.63044803113896e-09 3.02439024390244 124 41 137 41 NM_080555 refGene chr4 104090744 + 95672 graph_last 45 145 gtgtagatgc 147 2.2922367659913e-09 0 0 33 0 33 BC049262 knownGene chr10 101636709 + 15243 graph_last l 47 130 tgatggaagg 148 2.2922367659913e-09 0 0 33 0 33 ggaagccact 149 3.25700755701654e-09 2.59649122807018 148 57 164 57 tgtaaaataa 150 3.25700755701654e-09 0.05 2 40 2 40 aaggtggaag 151 3.41052424378374e-09 4.8125 77 16 85 16 acatcataga 152 3.45661250287095e-09 3.76 94 25 104 25 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 153 4.35846224919651e-09 0.0270270270270270 1 37 1 37 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 154 4.87339803165935e-09 10.2 51 5 56 5 gtatttgcaa 155 6.25814809310362e-09 0.0512820512820513 2 39 2 39 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 156 6.25814809310362e-09 0.0512820512820513 2 39 2 39 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 157 6.65181882449428e-09 0.140350877192982 8 57 9 57 gtatatatat 158 9.47344139672862e-09 0 0 31 0 31 aggcagacag 159 1.16161585824285e-08 1.78089887640449 317 178 351 179 taaatcaact 160 1.40201783002117e-08 Inf 32 0 35 0 NM_008740 refGene chr11 103486744 - 24251 graph_last l 109 193 ctaacagctg 161 1.6290767167847e-08 0.0285714285714286 1 35 1 35 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 162 1.9406484520355e-08 0 0 30 0 30 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 163 2.20209133164715e-08 0.243589743589744 19 78 21 78 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 164 2.46506635277307e-08 0.075 3 40 3 40 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 165 2.46506635277307e-08 0.075 3 40 3 40 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 166 2.88675748041003e-08 7.42857142857143 52 7 58 7 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 167 3.08174665780591e-08 0.0294117647058824 1 34 1 34 gaataataaa 168 3.08174665780591e-08 1.92248062015504 248 129 274 130 gtcatagctg 169 3.08174665780591e-08 0.0294117647058824 1 34 1 34 caaggtgaca 170 3.30526331613001e-08 3.69565217391304 85 23 94 23 NM_011170 refGene chr2 132080742 + 79291 graph_last l 147 432 tattttgttt 171 3.67139267741943e-08 0.205882352941176 14 68 16 68 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 172 3.83988262045478e-08 0 0 29 0 29 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 173 4.11500967462541e-08 19 38 2 42 2 ccctgcagct 174 4.42307539841472e-08 0.0555555555555556 2 36 2 36 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 175 4.42307539841472e-08 0.0555555555555556 2 36 2 36 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 176 4.49847807905278e-08 0.0769230769230769 3 39 3 39 aacaatttgg 177 4.60907978688282e-08 2.20253164556962 174 79 193 79 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 178 5.43443342367632e-08 34 34 1 38 1 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 179 5.86751284887325e-08 0.217391304347826 15 69 17 69 NM_009768 refGene chr10 82015311 + 14067 graph_last 78 531 ctctgactta 180 6.29864535071497e-08 0.277108433734940 23 83 25 83 NM_011221 refGene chr11 6368235 - 17495 graph_last l 75 170 gtttctcagg 181 7.62329172692785e-08 0 0 28 0 28 ttctggtttg 182 7.62329172692785e-08 0 0 28 0 28 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 183 8.25754810601997e-08 13.3333333333333 40 3 44 3 agaccctgtc 184 8.27950703251104e-08 0.0789473684210526 3 38 3 38 NM_020252 refGene chr17 90853487 - 62103 graph_last l 40 138 ctcttgtttc 185 8.27950703251104e-08 0.0571428571428571 2 35 2 35 NM_018804 refGene chr3 90895018 - 86721 graph_last l 44 123 tttatggaca 186 8.27950703251104e-08 0.0571428571428571 2 35 2 35 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 187 8.44851099777573e-08 Inf 29 0 32 0 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 188 9.8451588173528e-08 33 33 1 37 1 cgctggttcc 189 1.00710946245485e-07 3.16666666666667 95 30 105 30 cgggagatgc 190 1.00710946245485e-07 3.16666666666667 95 30 105 30 genomic chr18 6427244 - 0 unique_long l 28 108 gtgaaacgct 191 1.07731046622883e-07 0.03125 1 32 1 32 NM_182650 refGene chr6 51936886 - 112726 graph_last l 134 450 gtgtaataag 192 1.12642481956213e-07 4.84615384615385 63 13 70 13 cctttgagat 193 1.18470521858224e-07 6 54 9 60 9 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 194 1.28913881856239e-07 8.8 44 5 49 5 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 195 1.49474508945688e-07 0 0 27 0 27 AK033925 all_mrna chr12 33136193 + 27213 graph_second 0 357 gggaaaaaaa 196 1.52401828325134e-07 0.0810810810810811 3 37 3 37 tgagcaaaag 197 1.55318561425518e-07 0.0588235294117647 2 34 2 34 atgtctcaaa 198 1.62084289514363e-07 1.76729559748428 281 159 311 160 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 199 2.26546808308799e-07 0.127659574468085 6 47 7 47 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 200 2.47304218927371e-07 0.203389830508475 12 59 13 59 gtcaaaaaaa 201 2.47304218927371e-07 12.6666666666667 38 3 42 3 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 202 2.47304218927371e-07 12.6666666666667 38 3 42 3 gccaagtgga 203 2.54053209249488e-07 2.35593220338983 139 59 154 59 NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 204 2.65855181324972e-07 0.145833333333333 7 48 8 48 NM_023122 refGene chrX 154409033 + 152747 graph_last l 28 172 gttggctcct 205 2.8236703827611e-07 0.0833333333333333 3 36 3 36 gccaagggtc 206 2.84411201862282e-07 4.69230769230769 61 13 68 13 NM_019634 refGene chrX 9144236 - 147217 graph_last l 47 154 ctagacagag 207 2.91864426363831e-07 0.0606060606060606 2 33 2 33 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 208 2.91864426363831e-07 0.0606060606060606 2 33 2 33 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 209 2.92976974165494e-07 0 0 26 0 26 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 210 3.1473426710299e-07 0.296296296296296 24 81 26 81 ctaataaagc 211 3.37335332913696e-07 2.09638554216867 174 83 192 83 NM_033561 refGene chr5 133449095 + 107623 graph_last 0 106 gccactgcca 212 3.84155827187557e-07 0.0333333333333333 1 30 1 30 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 213 4.24916585148171e-07 12.3333333333333 37 3 41 3 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 214 4.5337391973031e-07 2.4 132 55 146 55 NM_019632 refGene chr2 149091252 - 80110 graph_last l 79 133 aacacttgta 215 5.92517997343957e-07 0 0 25 0 25 cctgcaggtc 216 5.92517997343957e-07 0 0 25 0 25 NM_008817 refGene chr7 6529154 + 118679 graph_last l 3 50 gctatagaaa 217 5.92517997343957e-07 0 0 25 0 25 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 218 5.92517997343957e-07 31 31 1 34 1 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 219 5.92517997343957e-07 31 31 1 34 1 ctacgttctc 220 5.93770740619532e-07 6.71428571428571 47 7 52 7 tgctgagaat 221 6.4941680982702e-07 5 55 11 61 11 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 222 7.15884123400495e-07 2.51063829787234 118 47 130 47 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 223 7.15884123400495e-07 2.90909090909091 96 33 106 33 NM_011123 refGene chrX 125410331 - 151562 graph_last l 63 147 ggaccgtaca 224 7.23676878326231e-07 0.0344827586206897 1 29 1 29 gctttgactg 225 9.53040976084134e-07 Inf 25 0 28 0 aagaaaccag 226 9.97438780349714e-07 6.57142857142857 46 7 51 7 gtgtatcttt 227 1.03200607483054e-06 8.2 41 5 45 5 caccaccgtt 228 1.11711273307231e-06 3.77777777777778 68 18 75 18 genomic chrM 16041 - 0 unique_long l 56 153 aataattagc 229 1.16454431013159e-06 0 0 24 0 24 aggatctcag 230 1.16454431013159e-06 0 0 24 0 24 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 231 1.16454431013159e-06 0 0 24 0 24 cccattggag 232 1.16454431013159e-06 0 0 24 0 24 aatttcaaaa 233 1.17618690176362e-06 3.07142857142857 86 28 95 28 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 234 1.37188261565222e-06 7.16666666666667 43 6 48 6 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 235 1.43717582835094e-06 0.111111111111111 4 36 4 36 gtttcacttt 236 1.44250793939154e-06 0.170212765957447 8 47 9 47 aagatcaaga 237 1.61583469887562e-06 0.408695652173913 47 115 52 116 aagaaaatag 238 1.75569051465517e-06 4.06666666666667 61 15 68 15 NM_023312 refGene chr8 70094469 - 130862 graph_last l 90 351 aaggatgtgc 239 2.00955618728211e-06 0.131578947368421 5 38 5 38 tgacaatttt 240 2.26725574867697e-06 16 32 2 35 2 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 241 2.48572661319883e-06 0.173913043478261 8 46 9 46 gtgaaattat 242 2.63868213725559e-06 0.125 5 40 6 40 NM_133769 refGene chr11 45821257 - 19420 graph_last l 39 136 gtggattttc 243 2.64379466229986e-06 0.0370370370370370 1 27 1 27 atgtagtagt 244 3.16320333214136e-06 5.75 46 8 51 8 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 245 3.58959646498549e-06 2.15625 138 64 153 64 NM_026313 refGene chr11 93874843 - 23162 graph_last l 64 190 tggagcagac 246 3.69559246261254e-06 28 28 1 31 1 NM_172512 refGene chr3 97919894 - 87291 graph_last l 130 345 gaacaggcag 247 4.63906951817132e-06 6.14285714285714 43 7 48 7 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 248 4.6442136795561e-06 0.128205128205128 5 39 6 39 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 249 4.72988489919342e-06 0 0 22 0 22 genomic chr3 41781934 + 0 unique_long l 12 40 ctgagcacac 250 4.72988489919342e-06 0 0 22 0 22 NM_008791 refGene chr16 98535719 + 56369 graph_last l 36 102 gatgcaccag 251 4.72988489919342e-06 0 0 22 0 22 NM_175341 refGene chr14 113535903 + 44420 graph_last l 10 67 ggattctaga 252 4.72988489919342e-06 0 0 22 0 22 NM_008226 refGene chr10 82039431 + 13984 graph_last l 23 87 aatgtactga 253 5.01566375304406e-06 0.0384615384615385 1 26 1 26 agcatcaata 254 5.01566375304406e-06 0.0384615384615385 1 26 1 26 NM_144859 refGene chr17 64375162 - 60598 graph_last l 61 136 ctttctcact 255 5.01566375304406e-06 0.0384615384615385 1 26 1 26 NM_007881 refGene chr6 126661781 - 116898 graph_last l 106 385 ggcctgcttc 256 5.09981697018009e-06 5.625 45 8 50 8 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 257 5.88729497184942e-06 Inf 23 0 25 0 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 258 5.88729497184942e-06 8.75 35 4 39 4 gagacagtga 259 5.88729497184942e-06 Inf 23 0 25 0 NM_009255 refGene chr1 81573344 - 3878 graph_last l 19 285 tgttcactaa 260 6.24663818809497e-06 0.138888888888889 5 36 5 36 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 261 6.37470623973226e-06 26 26 1 29 1 AF172088 knownGene chr7 110055240 - 124600 graph_last l 23 121 ggatcattct 262 6.61101142176364e-06 0.0689655172413793 2 29 2 29 genomic chr4 137235203 - 0 unique_long l 168 283 tcacatccaa 263 6.61101142176364e-06 0.0689655172413793 2 29 2 29 NM_010308 refGene chr8 95252523 + 132442 graph_last 48 209 ttgggatgtt 264 7.24851699218721e-06 0.22 11 50 12 50 atctttctgg 265 7.8227775828857e-06 0.131578947368421 5 38 6 38 genomic chr10 130504840 - 0 unique_long l 55 103 gtggcaggcg 266 9.34218344530227e-06 0 0 21 0 21 NM_178795 refGene chr2 121579213 + 78592 graph_last l 63 153 tgtgactccc 267 9.34218344530227e-06 0 0 21 0 21 ttgctcttca 268 9.34218344530227e-06 0 0 21 0 21 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 269 9.96571905078401e-06 8.5 34 4 38 4 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 270 1.01840953123783e-05 4.54545454545455 50 11 55 11 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 271 1.08340241138636e-05 Inf 22 0 24 0 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 272 1.13764067661542e-05 25 25 1 28 1 NM_009149 refGene chr8 112789992 - 133441 graph_last l 34 122 tcctcggtgt 273 1.21726418500002e-05 0.0714285714285714 2 28 2 28 ctgcatcgtt 274 1.26332251474703e-05 14.5 29 2 32 2 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 275 1.35332510573443e-05 0.135135135135135 5 37 6 37 NM_019793 refGene chr9 58246662 - 137907 graph_last l 251 568 gagactagca 276 1.37914387224094e-05 0.271186440677966 16 59 18 59 aacaggttca 277 1.39686932173345e-05 2.6 91 35 101 35 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 278 1.68422639357979e-05 4 52 13 58 13 atgcagagac 279 1.80284385845562e-05 0.0416666666666667 1 24 1 24 genomic chr4 129240676 - 0 unique_long l 22 104 cagccaggtg 280 1.80284385845562e-05 0.0416666666666667 1 24 1 24 tgtaatacaa 281 1.80284385845562e-05 0.0416666666666667 1 24 1 24 NM_008963 refGene chr2 25734542 - 72846 graph_last 54 177 gccaccctct 282 1.85802788667340e-05 0 0 20 0 20 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 283 1.85802788667340e-05 0 0 20 0 20 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 284 1.85802788667340e-05 3.31578947368421 63 19 70 19 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 285 1.97822921628904e-05 Inf 21 0 23 0 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 286 1.97822921628904e-05 Inf 21 0 23 0 AA270490 all_est chr11 82981326 + 22365 graph_last l 56 182 cagggtctgg 287 2.21162942758038e-05 0.0740740740740741 2 27 2 27 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 288 2.68493082803541e-05 0.295081967213115 18 61 20 61 gtggcacacg 289 2.68550349868763e-05 0.129032258064516 4 31 4 31 taaaaagaaa 290 2.68550349868763e-05 0.129032258064516 4 31 4 31 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 291 2.86029298118939e-05 8.25 33 4 36 4 attttgtata 292 3.45069055044323e-05 0.0434782608695652 1 23 1 23 NM_022656 refGene chr14 25710087 - 40123 graph_last l 90 323 ggtccaagag 293 3.56555159639678e-05 5.25 42 8 46 8 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 294 3.6939162870667e-05 0 0 19 0 19 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 295 3.6939162870667e-05 Inf 20 0 22 0 NM_009723 refGene chr6 115508288 - 116175 graph_last l 16 55 ctgtttgaac 296 3.6939162870667e-05 0 0 19 0 19 gaaaatatcc 297 3.6939162870667e-05 6.8 34 5 38 5 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 298 3.6939162870667e-05 Inf 20 0 22 0 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 299 3.6939162870667e-05 4.77777777777778 43 9 48 9 AY255605 knownGene chr4_random 6506063 + 99997 graph_second l 31 67 ttgtcactca 300 3.6939162870667e-05 0 0 19 0 19 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 301 3.81750503835217e-05 2.125 119 56 132 56 NM_010324 refGene chr19 43600476 - 69950 graph_last l 51 152 acatacaaat 302 3.95884213540154e-05 0.0769230769230769 2 26 2 26 NM_007508 refGene chr16 44062095 - 53860 graph_last l 42 142 ctcagaaagc 303 3.95884213540154e-05 0.0769230769230769 2 26 2 26 NM_011323 refGene chr15 103059910 + 50127 graph_last l 49 147 gggagactct 304 3.95884213540154e-05 0.0769230769230769 2 26 2 26 NM_009441 refGene chr16 96222366 + 56249 graph_last l 65 151 tgagaactgc 305 3.95884213540154e-05 0.0769230769230769 2 26 2 26 ttatcaagtg 306 3.95884213540154e-05 0.0769230769230769 2 26 2 26 tgtgccaagt 307 4.83335324756122e-05 2.42105263157895 92 38 102 38 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 308 4.92425638186642e-05 0.179487179487179 7 39 8 39 gaagatgagc 309 4.92425638186642e-05 0.179487179487179 7 39 8 39 ttttatgttt 310 5.13030175501277e-05 2.01538461538462 131 65 145 65 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 311 5.40685896401462e-05 0.311475409836066 19 61 21 61 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 312 5.7719281998891e-05 0.15625 5 32 5 32 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 313 5.90198637327723e-05 9.66666666666667 29 3 32 3 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 314 6.06536176094061e-05 0.305084745762712 18 59 20 59 NM_007756 refGene chr5 107494346 + 105667 graph_last l 178 537 tcagaggcct 315 6.06536176094061e-05 0.305084745762712 18 59 20 59 NM_008065 refGene chr16 86134860 + 55647 graph_last 65 333 aattagttgt 316 6.09372169031868e-05 0.264150943396226 14 53 16 53 tgtgttgtgt 317 6.09372169031868e-05 2.23404255319149 105 47 116 47 ccctgacttc 318 6.2796070516904e-05 0.0454545454545455 1 22 1 22 ggaaggatag 319 6.2796070516904e-05 0.0454545454545455 1 22 1 22 NM_008447 refGene chr10 130503334 - 16675 graph_last b 181 743 ccggcgtgga 320 6.29611076322487e-05 0.328125 21 64 23 64 tatagatatg 321 6.34516143170976e-05 0.111111111111111 3 27 3 27 gatgcgcttg 322 6.54114142782275e-05 Inf 19 0 21 0 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 323 6.7334571422631e-05 13 26 2 29 2 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 324 6.7334571422631e-05 13 26 2 29 2 acgacaagct 325 7.0744634167351e-05 0.08 2 25 2 25 NM_025482 refGene chr2 181399879 + 82485 graph_last l 38 91 caagctcatc 326 7.0744634167351e-05 0 0 18 0 18 cagagtcatt 327 7.0744634167351e-05 0 0 18 0 18 NM_013681 refGene chr6 116888565 + 116249 graph_last l 29 70 ccattgattg 328 7.0744634167351e-05 0 0 18 0 18 ttataatata 329 7.0962116947114e-05 5.83333333333333 35 6 39 6 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 330 7.31860262424523e-05 3.4375 55 16 61 16 tcttaatgaa 331 7.68778286893148e-05 2.35897435897436 92 39 102 39 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 332 7.72905291266615e-05 7.75 31 4 34 4 gtaagcaaaa 333 7.79092046940188e-05 1.88607594936709 149 79 165 79 NM_009790 refGene chr12 95771041 + 30604 graph_last l 97 273 tccaacttgt 334 7.82499626646786e-05 0.184210526315789 7 38 8 38 aaataaagat 335 7.95561524058592e-05 0.137931034482759 4 29 4 29 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 336 7.95561524058592e-05 0.137931034482759 4 29 4 29 gaatgtaaat 337 7.95561524058592e-05 0.137931034482759 4 29 4 29 agatctatac 338 8.84920954284782e-05 3.91666666666667 47 12 52 12 caaaaataaa 339 9.71500851000233e-05 0.487179487179487 57 117 63 118 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 340 9.71500851000233e-05 9.33333333333333 28 3 31 3 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 341 9.71500851000233e-05 9.33333333333333 28 3 31 3 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 342 0.000107368149273059 22 22 1 24 1 NM_023665 refGene chr4 133782708 + 98031 graph_last l 65 174 gttgaggttt 343 0.000107368149273059 22 22 1 24 1 NM_178060 refGene chr11 98352551 + 23676 graph_last l 413 1055 tctgtagccc 344 0.000108258349676102 2.01666666666667 121 60 134 60 AK085367 knownGene chr8 119156583 + 133821 graph_last l 39 190 cttcggttgt 345 0.000108634400514498 0.151515151515152 5 33 6 33 tgctgagatc 346 0.000108634400514498 0.151515151515152 5 33 6 33 ccttgacggc 347 0.000111154933692751 0.115384615384615 3 26 3 26 cctcctccag 348 0.000112826938350836 0.296296296296296 16 54 18 54 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 349 0.000116611943679334 Inf 18 0 20 0 agagcgaagt 350 0.000117855143490783 2.38888888888889 86 36 95 36 gcagctcaca 351 0.000124586702279180 0.0833333333333333 2 24 2 24 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 352 0.000124586702279180 0.0833333333333333 2 24 2 24 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 353 0.000124586702279180 2.19565217391304 101 46 112 46 NM_026147 refGene chr4 3762091 - 90957 graph_last 191 634 cctaccaaga 354 0.000129990676401006 2.60714285714286 73 28 81 28 NM_178923 refGene chr16 91561773 - 55890 graph_last 74 327 cttccccggg 355 0.000131527875766647 0.225 9 40 10 40 taagtggaat 356 0.000134034454071812 3.16666666666667 57 18 63 18 NM_009872 refGene chr1 76438520 + 3664 graph_last l 52 134 ctgggagttg 357 0.000135397853226457 0 0 17 0 17 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 358 0.000135397853226457 0 0 17 0 17 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 359 0.000135397853226457 0 0 17 0 17 tgccatagaa 360 0.000135397853226457 0 0 17 0 17 ttccagcctt 361 0.000136026441960546 0.411764705882353 35 85 39 85 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 362 0.000147113577544889 2.90476190476190 61 21 68 21 NM_021554 refGene chr7 113129493 + 124785 graph_last l 60 191 ctaataaacg 363 0.000154845841630823 6.4 32 5 35 5 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 364 0.000162877718371057 9 27 3 30 3 aaaataaagg 365 0.000181658972746971 5.5 33 6 37 6 NM_021278 refGene chrX 155230346 + 152783 graph_last l 30 91 caagttcttt 366 0.000185590172253816 21 21 1 23 1 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 367 0.000185590172253816 21 21 1 23 1 gtgagcttgt 368 0.000185590172253816 21 21 1 23 1 NM_153457 refGene chr12 68119328 - 28767 graph_last l 138 580 agtgggggtg 369 0.000191042466949126 0.407407407407407 33 81 37 81 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 370 0.000196742805783328 0.12 3 25 3 25 NM_008617 refGene chr5 134618530 + 107726 graph_last l 110 325 tctttggaac 371 0.000205798480179738 0.194444444444444 7 36 8 36 AF093677 knownGene chr1 24786836 + 1000 graph_last 117 388 agtggaggac 372 0.000209475937904539 0.230769230769231 9 39 10 39 NM_019444 refGene chr19 5659903 - 67592 graph_last l 67 129 agttggaaac 373 0.000209475937904539 0.05 1 20 1 20 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 374 0.000209475937904539 Inf 17 0 19 0 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 375 0.000209475937904539 0.05 1 20 1 20 gattctccga 376 0.000209475937904539 Inf 17 0 19 0 taatatttaa 377 0.000209475937904539 0.05 1 20 1 20 tacattttca 378 0.000211925137816046 4.44444444444444 40 9 44 9 gtggtgcacg 379 0.00022005413888402 0.0869565217391304 2 23 2 23 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 380 0.00022005413888402 0.0869565217391304 2 23 2 23 tatgtcaagc 381 0.000220279345682358 2.51724137931034 73 29 81 29 NM_007471 refGene chr16 86207600 - 55668 graph_last l 75 198 tatctttgga 382 0.000238348092018315 0.148148148148148 4 27 4 27 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 383 0.000250921872517336 6.2 31 5 34 5 NM_029879 refGene chr13 103551767 - 37712 graph_last l 48 91 caaatggact 384 0.00025921096679906 0 0 16 0 16 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 385 0.00025921096679906 0 0 16 0 16 ccatctctgc 386 0.00025921096679906 0 0 16 0 16 ctctggaaag 387 0.00025921096679906 0 0 16 0 16 ctgcagcacc 388 0.00025921096679906 0 0 16 0 16 NM_026110 refGene chr16 92290052 - 55957 graph_last l 22 88 gaatttttac 389 0.00025921096679906 0 0 16 0 16 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 390 0.00025921096679906 0 0 16 0 16 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 391 0.00025921096679906 0 0 16 0 16 tacatacata 392 0.00025921096679906 0 0 16 0 16 tctcccccac 393 0.00025921096679906 0 0 16 0 16 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 394 0.00025921096679906 0.5 56 112 62 113 tttcttaagc 395 0.00025921096679906 0 0 16 0 16 agaaataaat 396 0.000266691331316833 8.66666666666667 26 3 29 3 atggtgatgt 397 0.000266691331316833 0.172413793103448 5 29 5 29 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 398 0.000273311891965487 0.35 21 60 23 60 NM_198419 refGene chr13 43186420 + 34339 graph_last l 75 185 taaatccgaa 399 0.000292725201216276 0.161290322580645 5 31 6 31 tattaaatgt 400 0.000292725201216276 0.161290322580645 5 31 6 31 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 401 0.000317926703394176 2.61538461538462 68 26 75 26 aaataaatgt 402 0.000328587964586351 0.216216216216216 8 37 9 37 NM_080633 refGene chr15 83461809 + 48679 graph_last l 115 306 caactgtatt 403 0.000330691075082234 0.297872340425532 14 47 15 47 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 404 0.000330691075082234 11.5 23 2 25 2 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 405 0.000330691075082234 12 24 2 26 2 gcacaacttg 406 0.000330691075082234 1.76666666666667 159 90 176 91 ggcctgaggc 407 0.000330691075082234 11.5 23 2 25 2 NM_025550 refGene chr14 9444346 - 39138 graph_last l 32 106 taaagccact 408 0.000330691075082234 12 24 2 26 2 tccctggcat 409 0.000330691075082234 11.5 23 2 25 2 tgcagtcatc 410 0.000330691075082234 12 24 2 26 2 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 411 0.000332456682874724 7 28 4 31 4 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 412 0.000346999249346706 2.03846153846154 106 52 117 52 NM_010890 refGene chr9 75258934 + 139403 graph_last l 4 62 aaaacatctc 413 0.000367277173101251 Inf 16 0 18 0 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 414 0.000367277173101251 Inf 16 0 18 0 tccggcttgt 415 0.000367277173101251 Inf 16 0 18 0 NM_133195 refGene chr18 26103935 - 63468 graph_last l 96 185 aagagaacac 416 0.000371860106165966 0.0526315789473684 1 19 1 19 cctttatttc 417 0.000371860106165966 0.0526315789473684 1 19 1 19 ctcttcccac 418 0.000371860106165966 0.0526315789473684 1 19 1 19 gcgaagctca 419 0.000371860106165966 2.77272727272727 61 22 67 22 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 420 0.000371860106165966 0.0526315789473684 1 19 1 19 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 421 0.000371860106165966 0.0526315789473684 1 19 1 19 AK122383 knownGene chr4 149174539 - 99491 graph_last l 19 90 acctgcaaaa 422 0.000376140140587601 0.090909090909091 2 22 2 22 gggtcaaagg 423 0.000387424781228768 6 30 5 33 5 aataaactgc 424 0.000388073539971982 3.35714285714286 47 14 52 14 gactatatat 425 0.000478386024905778 4.71428571428571 33 7 37 7 gaaatttaaa 426 0.000479888292302073 4 40 10 44 10 acaccacagt 427 0.000485506630148613 0 0 15 0 15 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 428 0.000485506630148613 0 0 15 0 15 genomic chr14 26871103 - 0 unique_long l 17 58 actagtaaag 429 0.000485506630148613 0 0 15 0 15 atagaggcaa 430 0.000485506630148613 4.22222222222222 38 9 42 9 NM_172544 refGene chr12 85830616 + 30167 graph_last l 10 49 caaacaaaga 431 0.000485506630148613 0 0 15 0 15 AK030316 knownGene chrX 147505328 + 152449 graph_last l 25 78 caactgagaa 432 0.000485506630148613 0 0 15 0 15 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 433 0.000485506630148613 4.22222222222222 38 9 42 9 NM_177296 refGene chr6 29392712 - 111132 graph_last 19 58 caggttgaca 434 0.000485506630148613 0 0 15 0 15 NM_011100 refGene chr3 150651068 - 90234 graph_last l 38 103 cctaaaattc 435 0.000485506630148613 0 0 15 0 15 genomic chr11 30013082 - 0 unique_long l 19 65 ctctggatgg 436 0.000485506630148613 0 0 15 0 15 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 437 0.000485506630148613 0 0 15 0 15 gcactgctgt 438 0.000485506630148613 0 0 15 0 15 NM_008421 refGene chr7 39312189 + 120857 graph_last l 24 74 gctaagcaga 439 0.000485506630148613 0 0 15 0 15 NM_009359 refGene chr9 74997396 + 139362 graph_last 0 57 gctttcttaa 440 0.000485506630148613 0 0 15 0 15 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 441 0.000485506630148613 0 0 15 0 15 tgaaataaac 442 0.000485506630148613 2.43333333333333 73 30 81 30 BB648977 all_est chr1 15883659 + 550 graph_last 1 51 tgctgcccca 443 0.000485506630148613 0 0 15 0 15 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 444 0.000489691228289949 4.5 36 8 40 8 cccttcttct 445 0.000508259495733155 1.68932038834951 174 103 192 104 cccacaaggt 446 0.000523634581424569 3.2 48 15 53 15 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 447 0.000523634581424569 3.2 48 15 53 15 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 448 0.000523634581424569 19 19 1 21 1 tcctcacggg 449 0.000534965746783366 11 22 2 24 2 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 450 0.000534965746783366 11 22 2 24 2 NM_019498 refGene chr2 28483315 + 73055 graph_second l 49 149 aatagtttga 451 0.000549188146660528 0.125 3 24 3 24 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 452 0.000549188146660528 0.125 3 24 3 24 ctgtcatttg 453 0.000613692497712411 5.8 29 5 32 5 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 454 0.000613692497712411 5.8 29 5 32 5 aaaacagtgg 455 0.000638985226324052 2.65217391304348 61 23 68 23 ggggtacctg 456 0.000647973949304631 Inf 15 0 17 0 cgtctgtgga 457 0.000658071458936858 0.416666666666667 30 72 33 72 NM_008634 refGene chr13 97881760 - 37324 graph_last 35 132 aaaccagagc 458 0.000670779286780546 0.0555555555555556 1 18 1 18 NM_199022 refGene chr2 125928783 + 78833 graph_last l 38 101 cattgtggaa 459 0.000670779286780546 0.0555555555555556 1 18 1 18 ccaagaatct 460 0.000670779286780546 0.0555555555555556 1 18 1 18 AY255605 knownGene chr4_random 6506643 + 99997 graph_last l 11 70 gtatcgattt 461 0.000670779286780546 0.0555555555555556 1 18 1 18 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 462 0.000670779286780546 0.0555555555555556 1 18 1 18 atctgtactc 463 0.000720642536976811 4.71428571428571 33 7 36 7 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 464 0.000720642536976811 8 24 3 27 3 NM_026027 refGene chr18 36492704 + 63963 graph_last l 96 221 tgggttagac 465 0.000720642536976811 8 24 3 27 3 NM_011103 refGene chr14 25128446 - 40061 graph_last l 39 134 taggagactg 466 0.000725514794953632 0.185185185185185 5 27 5 27 atggctcaca 467 0.000767002677872455 0.172413793103448 5 29 6 29 NM_008064 refGene chr11 118838109 + 25448 graph_last b 37 222 cgcccctgaa 468 0.000767002677872455 0.172413793103448 5 29 6 29 gacattgatt 469 0.00080952513437071 0.302325581395349 13 43 14 43 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 470 0.000894318597163215 3.30769230769231 43 13 48 13 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 471 0.000910985429362168 18 18 1 20 1 CF929608 all_est chr12 51042570 + 28064 graph_last 3 55 aattcaatta 472 0.000910985429362168 18 18 1 20 1 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 473 0.000910985429362168 18 18 1 20 1 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 474 0.000910985429362168 10.5 21 2 23 2 NM_025936 refGene chr11 35449596 - 18948 graph_last l 26 105 tgcacacaag 475 0.000910985429362168 10.5 21 2 23 2 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 476 0.000910985429362168 18 18 1 20 1 NM_009127 refGene chr19 44493896 - 70022 graph_last l 9 52 aaaaccattg 477 0.000925760941054591 0 0 14 0 14 accttggaag 478 0.000925760941054591 0 0 14 0 14 NM_024495 refGene chr3 15111673 + 83194 graph_last l 63 134 agacaaactg 479 0.000925760941054591 0 0 14 0 14 aggaaggcgg 480 0.000925760941054591 1.94444444444444 105 54 116 54 gaatttgtgg 481 0.000925760941054591 0 0 14 0 14 NM_010884 refGene chr15 68450406 - 47673 graph_second l 7 33 gaggtgtcct 482 0.000925760941054591 0 0 14 0 14 NM_011123 refGene chrX 125409098 + 151562 graph_last l 35 129 ggccgaggca 483 0.000925760941054591 0 0 14 0 14 NM_182839 refGene chr13 71586451 + 36077 graph_last l 37 107 ggtgttctga 484 0.000925760941054591 0 0 14 0 14 NM_008448 refGene chr18 6415243 - 62563 graph_last 31 83 gttaattttg 485 0.000925760941054591 0 0 14 0 14 tagggcaatc 486 0.000925760941054591 2.52 63 25 70 25 tgaaaaaaaa 487 0.000925760941054591 2.52 63 25 70 25 tttaataatg 488 0.000925760941054591 0 0 14 0 14 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 489 0.000926964101374483 0.130434782608696 3 23 3 23 NM_029478 refGene chr11 86255209 - 22689 graph_last b 31 157 attccacgcg 490 0.00112641005085560 0.166666666666667 4 24 4 24 ggaaaggcaa 491 0.00112641005085560 0.166666666666667 4 24 4 24 NM_027016 refGene chr3 31714208 + 83982 graph_last l 55 162 atgggtcatc 492 0.00114700890657554 0.1 2 20 2 20 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 493 0.00114700890657554 Inf 14 0 16 0 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 494 0.00114700890657554 0.1 2 20 2 20 cttacatttc 495 0.00114700890657554 Inf 14 0 16 0 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 496 0.00114700890657554 Inf 14 0 16 0 ggatggcaat 497 0.00114700890657554 Inf 14 0 16 0 taaatgtcct 498 0.00114700890657554 Inf 14 0 16 0 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 499 0.00114700890657554 Inf 14 0 16 0 NM_010207 refGene chr7_random 27126424 - 127060 graph_last 0 21 ttcataaaaa 500 0.00114700890657554 Inf 14 0 16 0 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 501 0.00118478872438532 8 24 3 26 3 NM_011393 refGene chr2 103004726 + 77399 graph_last l 39 79 attgtttgca 502 0.00120797801326100 0.0588235294117647 1 17 1 17 NM_008817 refGene chr7 6528153 + 118679 graph_last l 18 67 cagaagcttt 503 0.00120797801326100 0.0588235294117647 1 17 1 17 NM_053195 refGene chr2 145714218 + 79909 graph_last l 28 81 cttgttacac 504 0.00120797801326100 0.0588235294117647 1 17 1 17 NM_010581 refGene chr16 50230898 + 54180 graph_last l 36 106 gtcctgtgac 505 0.00120797801326100 0.0588235294117647 1 17 1 17 tttattaaat 506 0.00120797801326100 0.0588235294117647 1 17 1 17 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 507 0.00120797801326100 0.0588235294117647 1 17 1 17 tggttgctgg 508 0.00122833474821808 0.576642335766423 79 137 87 138 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 509 0.00138505329354986 3.41666666666667 41 12 45 12 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 510 0.00139186159360558 6.25 25 4 28 4 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 511 0.00141696979297724 2.29032258064516 71 31 78 31 gcaatttaac 512 0.00149676077785911 10 20 2 22 2 NM_183180 refGene chr2 93817607 + 77024 graph_last l 24 68 gtcactattt 513 0.00149676077785911 10 20 2 22 2 taaaagaaaa 514 0.00154439916719310 2.42307692307692 63 26 70 26 acttcagcca 515 0.00155022543827232 17 17 1 19 1 NM_019829 refGene chr19 9252464 - 67921 graph_last l 37 132 ctgcagccta 516 0.00155022543827232 17 17 1 19 1 NM_133693 refGene chr7 24607291 - 119961 graph_last l 21 96 tggaaggacc 517 0.00155022543827232 17 17 1 19 1 gaagcaaaga 518 0.00156452019472971 2.61904761904762 55 21 61 21 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 519 0.00157326601675457 3 45 15 50 15 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 520 0.00164382354982305 4.83333333333333 29 6 32 6 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 521 0.00164382354982305 4.83333333333333 29 6 32 6 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 522 0.00170047828264227 4.42857142857143 31 7 34 7 tcttctcaca 523 0.00170047828264227 4.42857142857143 31 7 34 7 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 524 0.00171762493375064 4.125 33 8 36 8 aactgagggg 525 0.00171810520081767 0.412698412698413 26 63 29 63 genomic chr11 101636695 + 0 unique_long l 25 51 aaccagttct 526 0.00176053040587900 0 0 13 0 13 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 527 0.00176053040587900 0 0 13 0 13 NM_021281 refGene chr3 98256903 + 87330 graph_last l 63 113 atagccccaa 528 0.00176053040587900 0 0 13 0 13 atgtcatcaa 529 0.00176053040587900 0.257142857142857 9 35 10 35 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 530 0.00176053040587900 0 0 13 0 13 NM_010762 refGene chr2 127886475 - 78964 graph_last l 15 41 ctgtgttttc 531 0.00176053040587900 0 0 13 0 13 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 532 0.00176053040587900 0 0 13 0 13 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 533 0.00176053040587900 0 0 13 0 13 gcttttggag 534 0.00176053040587900 0 0 13 0 13 NM_011170 refGene chr2 132079926 + 79291 graph_last l 42 75 taacttagca 535 0.00176053040587900 0 0 13 0 13 NM_010404 refGene chr11 99931508 - 23830 graph_last l 9 50 tctgccagaa 536 0.00176053040587900 0 0 13 0 13 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 537 0.00176053040587900 0 0 13 0 13 NM_020011 refGene chr4_random 73585 + 99862 graph_last 2 44 ttggggaacc 538 0.00176053040587900 0 0 13 0 13 ttttctatgc 539 0.00176053040587900 0 0 13 0 13 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 540 0.00177868194417324 2.88235294117647 49 17 54 17 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 541 0.00180258988353751 2.13513513513514 79 37 87 37 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 542 0.00184475790161037 0.173913043478261 4 23 4 23 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 543 0.0018842881583208 2.54545454545455 56 22 62 22 NM_019685 refGene chr6 89947633 + 114790 graph_last l 44 104 gtggtttgga 544 0.00192646601994497 7.66666666666667 23 3 25 3 aacttgatta 545 0.00195844713078543 0.206896551724138 6 29 7 29 NM_008083 refGene chr16 42220064 - 53725 graph_last l 32 171 cctgaacttt 546 0.00195844713078543 0.206896551724138 6 29 7 29 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 547 0.00195844713078543 0.105263157894737 2 19 2 19 ttcattattg 548 0.00199151342526459 3.33333333333333 40 12 44 12 NM_008487 refGene chr3 90799038 + 86700 graph_last l 14 79 aatggatgca 549 0.00201197106388324 Inf 14 0 15 0 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 550 0.00201197106388324 Inf 14 0 15 0 cagaaacagg 551 0.00201197106388324 Inf 14 0 15 0 NM_021560 refGene chr3 17968391 + 83311 graph_last l 12 54 gcgatctgcc 552 0.00201197106388324 Inf 14 0 15 0 NM_053078 refGene chr18 33627973 + 63718 graph_last 0 18 ggtaaaatat 553 0.00201197106388324 Inf 14 0 15 0 NM_011130 refGene chr8 21486072 - 128541 graph_last l 56 93 tactatagtc 554 0.00201197106388324 Inf 14 0 15 0 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 555 0.0021534513796663 3.45454545454545 38 11 42 11 NM_172961 refGene chr16 8176147 + 51329 graph_last l 21 66 aattaaatgt 556 0.00216492969243779 0.0625 1 16 1 16 NM_008165 refGene chr11 56925522 + 20133 graph_last l 9 93 agccacagtt 557 0.00216492969243779 0.0625 1 16 1 16 tgaacacaca 558 0.00216492969243779 0.0625 1 16 1 16 agaggtgtag 559 0.00218470434514222 6 24 4 27 4 tgataaaagt 560 0.00219361398850951 2.93333333333333 44 15 49 15 acgctgaata 561 0.00242339651174006 9.5 19 2 21 2 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 562 0.00242339651174006 2.6 52 20 58 20 gcacaggaga 563 0.00242339651174006 9.5 19 2 21 2 gggtggggtg 564 0.00242339651174006 9.5 19 2 21 2 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 565 0.00250234661463295 4.66666666666667 28 6 31 6 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 566 0.00254369222775827 4 32 8 35 8 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 567 0.00259600909623278 16 16 1 18 1 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 568 0.00259600909623278 16 16 1 18 1 NM_018748 refGene chr9 120963196 + 142048 graph_last l 42 101 tcatctcaga 569 0.00259600909623278 16 16 1 18 1 ttggaacaat 570 0.00259600909623278 16 16 1 18 1 NM_008691 refGene chr14 59840834 + 42397 graph_last l 80 163 agtgaatgca 571 0.00262308700129603 0.142857142857143 3 21 3 21 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 572 0.00279522596455976 1.61764705882353 165 102 182 103 tgatatgagc 573 0.00289821745429237 0.354166666666667 17 48 19 48 tctaccccat 574 0.00298660766815686 0.315789473684211 12 38 13 38 NM_008138 refGene chr9 110247498 - 141261 graph_last l 20 144 cagagatccc 575 0.00312697372546987 0.181818181818182 4 22 4 22 atactaacgt 576 0.0031839311612379 7.33333333333333 22 3 24 3 atttttcttt 577 0.0031839311612379 7.33333333333333 22 3 24 3 gtcagttaaa 578 0.0031839311612379 7.33333333333333 22 3 24 3 tttctgtatg 579 0.0031839311612379 7.33333333333333 22 3 24 3 NM_009062 refGene chr1 173495897 - 8325 graph_last l 18 51 aactgcaaag 580 0.00334981333872134 0 0 12 0 12 NM_015744 refGene chr15 56417904 + 47061 graph_last l 29 65 aagatgcaca 581 0.00334981333872134 0 0 12 0 12 U38501 knownGene chr5 16201084 - 100706 graph_last l 10 43 aagctgttcg 582 0.00334981333872134 0 0 12 0 12 NM_010008 refGene chr4 95616817 - 95158 graph_last l 7 43 agggaatgga 583 0.00334981333872134 0 0 12 0 12 NM_178679 refGene chr10 69779847 - 13250 graph_last l 26 73 cggactatga 584 0.00334981333872134 0 0 12 0 12 NM_020591 refGene chr11 68912604 + 21005 graph_last l 26 59 cgtgatggag 585 0.00334981333872134 0 0 12 0 12 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 586 0.00334981333872134 0 0 12 0 12 gccgaccccg 587 0.00334981333872134 0 0 12 0 12 gctcttggct 588 0.00334981333872134 0 0 12 0 12 NM_025368 refGene chr7 37364063 + 120679 graph_last l 14 107 gctgccctgc 589 0.00334981333872134 0 0 12 0 12 NM_133834 refGene chr6 119757972 + 116416 graph_last l 10 48 gtaacatctt 590 0.00334981333872134 0 0 12 0 12 NM_008947 refGene chr12 95672134 + 30593 graph_last 10 50 gtcctggggg 591 0.00334981333872134 0 0 12 0 12 NM_016783 refGene chrX 27932232 - 147872 graph_last l 3 92 tagtgttttc 592 0.00334981333872134 0 0 12 0 12 NM_008131 refGene chr1 157363262 + 7351 graph_last l 47 91 tccggtaggc 593 0.00334981333872134 0 0 12 0 12 NM_010250 refGene chr11 41756133 - 19197 graph_last l 43 98 tctcactgta 594 0.00334981333872134 0 0 12 0 12 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 595 0.00334981333872134 0 0 12 0 12 tgaatggcct 596 0.00351149850460961 6 24 4 26 4 tcaaaaaaaa 597 0.00351915569776007 0.375 18 48 20 48 NM_023595 refGene chr2 125512553 + 78807 graph_last l 26 60 cagacttggt 598 0.00362150299241159 Inf 13 0 14 0 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 599 0.00362150299241159 Inf 13 0 14 0 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 600 0.00385722902080517 0.333333333333333 13 39 14 39 NM_178627 refGene chr15 84789986 + 48851 graph_last 0 28 gccttttgct 601 0.00394259913432326 0.0666666666666667 1 15 1 15 NM_010480 refGene chr12 106260821 - 31241 graph_last 20 90 gcttagaagt 602 0.00394259913432326 0.0666666666666667 1 15 1 15 tggtggaatg 603 0.00394259913432326 0.0666666666666667 1 15 1 15 gccaaaccaa 604 0.00401118918860176 9 18 2 20 2 gtgccaggaa 605 0.00401118918860176 9 18 2 20 2 gtgttaacca 606 0.00401347703673926 2.75 44 16 49 16 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 607 0.00439029537118663 0.258064516129032 8 31 9 31 NM_144871 refGene chr19 3622286 + 67325 graph_last l 24 69 cacttgcagt 608 0.00442925370957513 15 15 1 17 1 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 609 0.00442925370957513 15 15 1 17 1 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 610 0.00442925370957513 15 15 1 17 1 NM_133699 refGene chr12 17676661 + 26516 graph_last l 29 105 cggccactgg 611 0.00442925370957513 15 15 1 17 1 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 612 0.00442925370957513 15 15 1 17 1 NM_030689 refGene chr15 81112482 - 48457 graph_last l 53 154 ggaagaggca 613 0.00442925370957513 0.15 3 20 3 20 gggggtgagg 614 0.00442925370957513 15 15 1 17 1 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 615 0.00442925370957513 15 15 1 17 1 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 616 0.00442925370957513 0.15 3 20 3 20 NM_027360 refGene chr12 107529636 - 31397 graph_last 192 512 gaacatcact 617 0.00445217551642276 2.8 42 15 47 15 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 618 0.00515138150462981 0.2 5 25 6 25 caaaacaggc 619 0.00517600891899561 0.190476190476190 4 21 4 21 NM_018753 refGene chr2 164632157 + 81241 graph_last 103 410 cactgattta 620 0.00517600891899561 0.423728813559322 25 59 28 59 cctggcactg 621 0.00517600891899561 0.190476190476190 4 21 4 21 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 622 0.00517600891899561 7 21 3 23 3 taaaaagaag 623 0.00517600891899561 0.190476190476190 4 21 4 21 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 624 0.00517600891899561 7 21 3 23 3 tggcccaaat 625 0.00538492562832021 2.57894736842105 49 19 54 19 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 626 0.00573395194542479 0.342105263157895 13 38 14 38 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 627 0.00580203138065742 3.75 30 8 33 8 gagcgttttg 628 0.00587137951812016 1.69014084507042 120 71 133 71 ccctgatttt 629 0.00595462165627049 4 28 7 31 7 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 630 0.00595462165627049 4 28 7 31 7 NM_009169 refGene chr6 6285073 - 110133 graph_last 73 165 tttatttcat 631 0.00595462165627049 4.8 24 5 27 5 aagagtcttt 632 0.0059648107440087 0.117647058823529 2 17 2 17 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 633 0.0060107786678245 4.33333333333333 26 6 29 6 NM_177735 refGene chr5 143487678 - 108399 graph_last l 31 144 ccaccattgt 634 0.00620300147592365 0.28125 9 32 10 32 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 635 0.00631616630933268 2.02777777777778 73 36 81 36 aaaatgttgt 636 0.00635832264398803 Inf 12 0 13 0 genomic chr5 66911133 - 0 unique_long l 2 27 aattcgcctg 637 0.00635832264398803 0 0 11 0 11 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 638 0.00635832264398803 Inf 12 0 13 0 AK028183 knownGene chr2 30233775 + 73205 graph_last l 11 48 agggcctgtg 639 0.00635832264398803 Inf 12 0 13 0 NM_172563 refGene chr11 89920266 - 22996 graph_last l 11 46 atattgctgg 640 0.00635832264398803 0 0 11 0 11 NM_144513 refGene chr12 105130773 + 31142 graph_last l 111 152 caaagagaac 641 0.00635832264398803 0 0 11 0 11 AK038254 all_mrna chr14 61172705 - 42449 graph_last 0 70 cacacgcgca 642 0.00635832264398803 0 0 11 0 11 AK047363 knownGene chr2 104408933 - 77515 graph_last l 9 37 ccccagcctg 643 0.00635832264398803 0 0 11 0 11 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 644 0.00635832264398803 0 0 11 0 11 NM_183252 refGene chr1 43390024 + 1858 graph_last l 11 51 cctaaagatt 645 0.00635832264398803 Inf 12 0 13 0 NM_009333 refGene chr19 55934627 + 70663 graph_last 10 64 cctgccgttc 646 0.00635832264398803 0 0 11 0 11 ctgcagcggc 647 0.00635832264398803 0 0 11 0 11 ctgcctgagt 648 0.00635832264398803 0 0 11 0 11 gaaatgataa 649 0.00635832264398803 0 0 11 0 11 gacacgggag 650 0.00635832264398803 0 0 11 0 11 BU923187 all_est chr12 113283837 + 31651 graph_last l 22 68 gagttctgcc 651 0.00635832264398803 0 0 11 0 11 NM_178624 refGene chr9 116584101 + 141769 graph_last l 13 60 gcaccagcag 652 0.00635832264398803 Inf 12 0 13 0 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 653 0.00635832264398803 Inf 12 0 13 0 NM_080638 refGene chr7 119109952 - 125151 graph_second l 12 55 gccctggccc 654 0.00635832264398803 0 0 11 0 11 gctccagcct 655 0.00635832264398803 0 0 11 0 11 NM_026664 refGene chr11 75792879 - 21685 graph_last 4 40 ggggtgcacg 656 0.00635832264398803 0 0 11 0 11 NM_022027 refGene chr10 4901965 - 9989 graph_last 14 36 gtatgcactc 657 0.00635832264398803 0 0 11 0 11 genomic chr5 102276643 - 0 unique_long l 4 41 taaaccaaaa 658 0.00635832264398803 0 0 11 0 11 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 659 0.00635832264398803 0 0 11 0 11 tgaagacagt 660 0.00635832264398803 Inf 12 0 13 0 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 661 0.00635832264398803 0 0 11 0 11 NM_009576 refGene chr9 93760190 - 140249 graph_last 8 31 ttacagctat 662 0.00635832264398803 0 0 11 0 11 NM_172882 refGene chr5 101041456 - 105200 graph_last l 4 26 ttaccccaaa 663 0.00635832264398803 0 0 11 0 11 NM_010814 refGene chr17 36763077 - 59103 graph_last l 23 48 ttagtctgac 664 0.00635832264398803 0 0 11 0 11 NM_018856 refGene chr4 153937503 + 99814 graph_last l 18 45 tttaatacaa 665 0.00635832264398803 Inf 12 0 13 0 agctgtacag 666 0.00640408584167927 8.5 17 2 19 2 NM_008632 refGene chr1 68044382 - 3222 graph_last 0 44 attggcattt 667 0.00640408584167927 8.5 17 2 19 2 NM_019817 refGene chr15_random 21717553 - 50853 graph_last l 76 148 cactggctga 668 0.00640408584167927 8.5 17 2 19 2 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 669 0.00640408584167927 8.5 17 2 19 2 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 670 0.00640408584167927 8.5 17 2 19 2 NM_023526 refGene chr14 13638419 - 39306 graph_last 11 60 tagttaatgt 671 0.00640408584167927 8.5 17 2 19 2 NM_010312 refGene chr5_random 31027705 - 109596 graph_last l 135 460 gcctcacccc 672 0.00661027411164587 3.18181818181818 35 11 39 11 NM_008817 refGene chr7 6530850 + 118679 graph_last l 27 91 acaagtgcgt 673 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_178081 refGene chr1 53927709 - 2312 graph_last l 7 45 acagacaagg 674 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_010338 refGene chr6 25536450 - 110955 graph_last l 13 68 caacttagca 675 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_013783 refGene chr4 153012039 - 99695 graph_last l 33 122 gtgtgccgct 676 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_009155 refGene chr15 3359640 - 44888 graph_last l 96 194 tatctgtgca 677 0.00686288735139628 0.0714285714285714 1 14 1 14 tcaataaagc 678 0.00686288735139628 2.64705882352941 45 17 50 17 NM_008448 refGene chr18 6438239 - 62563 graph_last 23 91 tcgcagttac 679 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_175229 refGene chr17 23399125 + 57745 graph_last l 32 111 ttgctggaaa 680 0.00686288735139628 0.0714285714285714 1 14 1 14 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 681 0.0068915212748642 0.358974358974359 14 39 15 39 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 682 0.00712986416131132 0.157894736842105 3 19 3 19 taatgtagac 683 0.00712986416131132 0.157894736842105 3 19 3 19 tagagactgc 684 0.00712986416131132 0.157894736842105 3 19 3 19 NM_011112 refGene chr12 101396152 + 30934 graph_last 24 79 actggagttt 685 0.00729143382607014 14 14 1 16 1 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 686 0.00729143382607014 14 14 1 16 1 AK028542 knownGene chr1 139190833 - 6589 graph_last l 26 97 gcaccaactg 687 0.00729143382607014 14 14 1 16 1 NM_173784 refGene chr11 32416958 + 18750 graph_last l 10 58 gtgctggtaa 688 0.00729143382607014 14 14 1 16 1 genomic chr13 54365790 + 0 unique_long l 16 52 tacaattgtc 689 0.00729143382607014 14 14 1 16 1 NM_011162 refGene chr2 92999933 - 76972 graph_last l 118 242 ccacctggaa 690 0.0073656921581742 0.230769230769231 6 26 7 26 gggtaggggt 691 0.0073656921581742 0.230769230769231 6 26 7 26 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 692 0.00737983767153469 0.357142857142857 15 42 17 42 NM_053076 refGene chr19 7418315 - 67781 graph_last l 109 357 agagggtttt 693 0.00798853696985587 0.351351351351351 13 37 14 37 NM_026369 refGene chr1 156203375 + 7249 graph_last b 20 105 atttcccgag 694 0.00801209633716255 6.33333333333333 19 3 21 3 aaccgtgaat 695 0.0080464212096037 6.66666666666667 20 3 22 3 aagacccacc 696 0.0080464212096037 0.227272727272727 5 22 5 22 acccctgacc 697 0.0080464212096037 6.66666666666667 20 3 22 3 AK122204 knownGene chr2 92236623 + 76871 graph_last l 43 102 agacaactaa 698 0.0080464212096037 6.66666666666667 20 3 22 3 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 699 0.0080464212096037 6.66666666666667 20 3 22 3 NM_177887 refGene chr5_random 412529 - 108970 graph_last 70 146 cctttctgtc 700 0.0080464212096037 0.227272727272727 5 22 5 22 AK122380 knownGene chr8 84801596 + 131761 graph_last l 67 149 ctacagttcc 701 0.0080464212096037 0.227272727272727 5 22 5 22 NM_009454 refGene chr2 79285572 + 76085 graph_last l 15 125 ctcctgaagg 702 0.0080464212096037 6.66666666666667 20 3 22 3 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 703 0.0085157546350638 2.45 49 20 54 20 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 704 0.00853976939466049 3.85714285714286 27 7 30 7 NM_026629 refGene chr6 55168250 + 112941 graph_last l 20 135 agagcaagga 705 0.00853976939466049 3.85714285714286 27 7 30 7 NM_183216 refGene chr19 44405963 + 70020 graph_last l 282 1147 caggactccg 706 0.00855642598733567 0.5625 54 96 60 97 ccctcaccca 707 0.00855642598733567 5.5 22 4 24 4 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 708 0.00855642598733567 5.5 22 4 24 4 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 709 0.00855642598733567 5.5 22 4 24 4 gttgtgattt 710 0.0087430635410233 4.8 24 5 26 5 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 711 0.0087430635410233 4.8 24 5 26 5 AK084022 knownGene chr11 60723328 - 20505 graph_last l 38 149 tgaacctgag 712 0.0087430635410233 4.8 24 5 26 5 NM_176841 refGene chr11 29406550 + 18533 graph_last l 7 262 tgttggtacg 713 0.0087430635410233 4.8 24 5 26 5 NM_031179 refGene chr1 56302543 - 2445 graph_last l 29 113 caaactgaag 714 0.00978074582055199 0.125 2 16 2 16 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 715 0.00978074582055199 0.125 2 16 2 16 NM_010487 refGene chr9 22639791 - 135759 graph_last l 26 97 ggatggctta 716 0.00978074582055199 0.125 2 16 2 16 NM_008748 refGene chr7 134139181 - 126141 graph_last l 18 102 gtggaggggc 717 0.00978074582055199 0.125 2 16 2 16 NM_173405 refGene chr5 139491490 - 108111 graph_last l 24 72 tgagtagcaa 718 0.00978074582055199 0.125 2 16 2 16 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 719 0.00978074582055199 0.125 2 16 2 16 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 720 0.00987394815022984 1.84782608695652 85 46 94 46 NM_026467 refGene chr9 69425322 + 138888 graph_last l 20 143 cacagactgt 721 0.0105063083627436 8 16 2 18 2 genomic chr10 64909820 + 0 unique_long l 8 46 gtgccaagga 722 0.0105063083627436 8 16 2 18 2 acagtgcctg 723 0.0106520447623652 3.2 32 10 35 10 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 724 0.0106520447623652 1.67647058823529 114 68 126 68 gtagtggaag 725 0.0106520447623652 3.3 33 10 36 10 tgtgaagtag 726 0.0106520447623652 3.3 33 10 36 10 tacttgtgtt 727 0.010675831379731 0.436363636363636 24 55 27 55 NM_008098 refGene chr6 35450366 - 111690 graph_last l 127 284 tacatccgaa 728 0.0108772841313538 2.84615384615385 37 13 41 13 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 729 0.0110800606406322 Inf 11 0 12 0 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 730 0.0110800606406322 Inf 11 0 12 0 gaaagggagg 731 0.0110800606406322 Inf 11 0 12 0 gagaacacac 732 0.0110800606406322 Inf 11 0 12 0 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 733 0.0110800606406322 Inf 11 0 12 0 gcctctcctc 734 0.0110800606406322 Inf 11 0 12 0 gcggtgaatc 735 0.0110800606406322 Inf 11 0 12 0 NM_178655 refGene chr3 130442092 + 89080 graph_last 33 84 ggaacaagat 736 0.0110800606406322 Inf 11 0 12 0 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 737 0.0110800606406322 Inf 11 0 12 0 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 738 0.0110800606406322 Inf 11 0 12 0 NM_182650 refGene chr6 51936949 + 112726 graph_last l 5 29 tcacctgaaa 739 0.0110800606406322 Inf 11 0 12 0 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 740 0.0110800606406322 Inf 11 0 12 0 tccctgactt 741 0.0110800606406322 Inf 11 0 12 0 NM_198861 refGene chr11 62175979 + 20650 graph_last l 24 85 tctgccaatt 742 0.0110800606406322 Inf 11 0 12 0 tgagcaggac 743 0.0110800606406322 Inf 11 0 12 0 NM_009871 refGene chr11 80052158 + 22184 graph_last l 6 28 tgatgttttt 744 0.0110800606406322 Inf 11 0 12 0 NM_011247 refGene chr7 115067512 + 124908 graph_last l 12 31 ttcataaata 745 0.0110800606406322 Inf 11 0 12 0 aagaattaga 746 0.0111737719793642 0 0 10 0 10 NM_146054 refGene chr14 37249100 - 40748 graph_last l 7 30 aagtatgtga 747 0.0111737719793642 0 0 10 0 10 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 748 0.0111737719793642 0 0 10 0 10 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 749 0.0111737719793642 0 0 10 0 10 NM_012038 refGene chr12 11533918 - 26294 graph_last l 20 42 agaatgtcat 750 0.0111737719793642 0 0 10 0 10 agactgtctc 751 0.0111737719793642 0 0 10 0 10 NM_026002 refGene chr15 34549312 + 46126 graph_last l 13 44 agcactagtg 752 0.0111737719793642 0 0 10 0 10 NM_008910 refGene chr12 68700882 + 28812 graph_last 1 25 agcagtttga 753 0.0111737719793642 0 0 10 0 10 atgctcatta 754 0.0111737719793642 0 0 10 0 10 AK019388 knownGene chr13 57917174 - 35327 graph_last l 70 248 caatagaatt 755 0.0111737719793642 2.4 48 20 53 20 NM_027629 refGene chr7 92441942 + 123455 graph_last l 36 59 caccgtaatg 756 0.0111737719793642 0 0 10 0 10 cactaaggct 757 0.0111737719793642 0 0 10 0 10 NM_026934 refGene chr2 84026358 + 76261 graph_last 13 46 cacttcctcc 758 0.0111737719793642 0 0 10 0 10 AK090138 knownGene chr11 77836993 + 21928 graph_last l 12 38 ccccaggccg 759 0.0111737719793642 0 0 10 0 10 cctccctttt 760 0.0111737719793642 3.33333333333333 30 9 33 9 genomic chr5 135848574 + 0 unique_long l 34 144 cgccctggct 761 0.0111737719793642 0 0 10 0 10 CB056808 all_est chr2 153112222 - 80364 graph_last l 11 46 ctccaatctc 762 0.0111737719793642 0 0 10 0 10 NM_173363 refGene chr12 107106677 + 31339 graph_last 13 63 cttgacacac 763 0.0111737719793642 0 0 10 0 10 NM_033264 refGene chr9 114793000 - 141710 graph_last l 7 35 gagagtgctt 764 0.0111737719793642 0 0 10 0 10 NM_178880 refGene chr16 93083526 + 56030 graph_last l 24 166 gcggccgaca 765 0.0111737719793642 0.166666666666667 3 18 3 18 NM_019648 refGene chr10 96268892 - 14982 graph_last 13 63 gcgggcgtgg 766 0.0111737719793642 0 0 10 0 10 gctaagttcc 767 0.0111737719793642 0 0 10 0 10 gctgccacca 768 0.0111737719793642 0 0 10 0 10 gctgtcctca 769 0.0111737719793642 0 0 10 0 10 gcttccaatc 770 0.0111737719793642 0 0 10 0 10 NM_009306 refGene chr10 111148544 - 15693 graph_last l 10 27 ggaggcacat 771 0.0111737719793642 0 0 10 0 10 NM_027000 refGene chr13 9172476 - 32500 graph_last 1 58 ggttaaagga 772 0.0111737719793642 0 0 10 0 10 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 773 0.0111737719793642 0 0 10 0 10 genomic chr17 44965216 + 0 unique_long l 16 43 gtctgcccgg 774 0.0111737719793642 0 0 10 0 10 NM_010731 refGene chr10 83522601 + 14167 graph_second l 29 88 gtgggatcga 775 0.0111737719793642 0 0 10 0 10 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 776 0.0111737719793642 0 0 10 0 10 AJ401376 knownGene chr4 128057064 + 97428 graph_last l 10 40 tctgcttgca 777 0.0111737719793642 0 0 10 0 10 NM_016759 refGene chr11 102065534 + 24069 graph_last l 25 64 tcttgtccat 778 0.0111737719793642 0 0 10 0 10 tgacccttgc 779 0.0111737719793642 0 0 10 0 10 NM_027439 refGene chrX 11164881 + 147275 graph_last l 143 350 tgcaaatgga 780 0.0111737719793642 0.24 6 25 7 25 BY175648 all_est chr2 167709855 - 81522 graph_second l 11 37 tggtgagagg 781 0.0111737719793642 0 0 10 0 10 NM_026081 refGene chrX 124417682 + 151508 graph_last l 85 203 tggttctctg 782 0.0111737719793642 0.24 6 25 7 25 tgtgcactgt 783 0.0111737719793642 0 0 10 0 10 NM_011123 refGene chrX 125410059 + 151562 graph_second l 76 114 tgttcttccc 784 0.0111737719793642 0 0 10 0 10 ttcagctcga 785 0.0111737719793642 2.5 45 18 50 18 ttttccactt 786 0.0111737719793642 0.166666666666667 3 18 3 18 NM_133749 refGene chr2 112692316 + 77966 graph_last l 24 55 ttttgtactt 787 0.0111737719793642 0 0 10 0 10 gggaaggcgg 788 0.011200437160937 1.78431372549020 91 51 101 51 genomic chr11 119091671 - 0 unique_long l 46 102 aattgttaag 789 0.0113873535891232 0.0769230769230769 1 13 1 13 genomic chr13 71065301 + 0 unique_short s 1 51 acacgacgta 790 0.0113873535891232 14 14 1 15 1 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 791 0.0113873535891232 14 14 1 15 1 caaatatgtt 792 0.0113873535891232 14 14 1 15 1 catacctgaa 793 0.0113873535891232 2.91666666666667 35 12 39 12 NM_007552 refGene chr2 18792200 + 72377 graph_last 0 60 cattcaaaaa 794 0.0113873535891232 14 14 1 15 1 NM_019827 refGene chr16 38048116 + 53446 graph_last l 18 74 ctcggattca 795 0.0113873535891232 0.0769230769230769 1 13 1 13 NM_009129 refGene chr1 81220284 - 3857 graph_last l 55 117 gaattgatga 796 0.0113873535891232 0.0769230769230769 1 13 1 13 NM_019796 refGene chr9 91413676 - 140127 graph_last 14 65 gcaaacaatc 797 0.0113873535891232 14 14 1 15 1 NM_021324 refGene chr7 4002060 + 118502 graph_last l 77 162 gcaaagaaaa 798 0.0113873535891232 0.0769230769230769 1 13 1 13 NM_008448 refGene chr18 6421658 - 62563 graph_last l 34 79 gccagaaggg 799 0.0113873535891232 0.0769230769230769 1 13 1 13 gcctcctcct 800 0.0113873535891232 14 14 1 15 1 NM_198618 refGene chr4 126150026 + 97292 graph_last l 23 89 ggcaccatct 801 0.0113873535891232 0.0769230769230769 1 13 1 13 NM_010731 refGene chr10 83523198 + 14167 graph_last l 19 63 ggggtccaga 802 0.0113873535891232 0.0769230769230769 1 13 1 13 gtaccctgtg 803 0.0113873535891232 0.0769230769230769 1 13 1 13 tatcatcttt 804 0.0113873535891232 0.0769230769230769 1 13 1 13 tccggggacg 805 0.0113873535891232 0.0769230769230769 1 13 1 13 NM_027276 refGene chr8 14486036 + 128170 graph_last l 9 87 tgccagagta 806 0.0113873535891232 14 14 1 15 1 tggatgtagt 807 0.0113873535891232 0.0769230769230769 1 13 1 13 tgtatgtctg 808 0.0113873535891232 14 14 1 15 1 NM_138660 refGene chr11 98417334 + 23682 graph_last l 10 51 tgtgttgttt 809 0.0113873535891232 14 14 1 15 1 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 810 0.0113873535891232 14 14 1 15 1 NM_013876 refGene chr4 108313676 - 96057 graph_last l 24 76 tttaaattgt 811 0.0113873535891232 0.0769230769230769 1 13 1 13 ccatattatg 812 0.0116947824223324 6 18 3 20 3 agggaaaaaa 813 0.0117780675294297 3.71428571428571 26 7 29 7 gaagtcggaa 814 0.0117780675294297 3.71428571428571 26 7 29 7 gagtctccct 815 0.0117780675294297 3.71428571428571 26 7 29 7 aaaccctgtc 816 0.0119393079750022 0.238095238095238 5 21 5 21 tacacacctg 817 0.0119688645820624 0.2 4 20 4 20 NM_011219 refGene chr6 22928921 + 110854 graph_last l 25 196 gtttttatct 818 0.0122712136160536 4 24 6 27 6 NM_008251 refGene chr16 98082681 - 56348 graph_last l 29 115 taataaaaat 819 0.0122712136160536 4 24 6 27 6 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 820 0.0124731332868481 2.71428571428571 38 14 42 14 tgaggatgaa 821 0.0124731332868481 5.25 21 4 23 4 tttgctacaa 822 0.0124731332868481 2.71428571428571 38 14 42 14 NM_010470 refGene chr4 137020995 + 98319 graph_last l 45 142 aacttttaaa 823 0.0125174138205051 4.6 23 5 25 5 gctataataa 824 0.0126177564381250 3 33 11 37 11 NM_009983 refGene chr7 134433272 - 126175 graph_last l 270 537 cctcagcctg 825 0.0131155875278060 0.378378378378378 14 37 15 37 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 826 0.0132470853167659 0.444444444444444 24 54 27 54 gtgggcgtgt 827 0.0138338956873811 0.571428571428571 52 91 58 92 gcagagtgcg 828 0.0142110774079552 0.395348837209302 17 43 19 43 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 829 0.0149214478120267 1.77551020408163 87 49 96 49 atagcagcac 830 0.0150722476109541 0.269230769230769 7 26 8 26 NM_028601 refGene chr11 6303680 + 17481 graph_last l 21 115 tggtgtctgc 831 0.0150722476109541 0.269230769230769 7 26 8 26 NM_011908 refGene chr5 147244991 - 108693 graph_last l 35 93 agctaatttc 832 0.0155843659607008 0.133333333333333 2 15 2 15 NM_178597 refGene chr14 15621704 - 39454 graph_last l 61 164 cagccctccc 833 0.0155843659607008 0.133333333333333 2 15 2 15 NM_020269 refGene chr1 176231647 + 8558 graph_last l 55 111 ctagctaacc 834 0.0155843659607008 0.133333333333333 2 15 2 15 BC042720 knownGene chr1 68276988 + 3240 graph_last l 38 96 gaaaatgcat 835 0.0155843659607008 0.133333333333333 2 15 2 15 gtggtgcaca 836 0.0155843659607008 0.133333333333333 2 15 2 15 NM_133821 refGene chr1 108742049 + 5254 graph_last l 17 82 tcgtaatttt 837 0.0155843659607008 0.133333333333333 2 15 2 15 tttggtttgg 838 0.0155843659607008 0.133333333333333 2 15 2 15 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 839 0.0158509376869618 7.5 15 2 17 2 NM_025520 refGene chr6 57159890 - 113026 graph_last 7 60 gttattttgg 840 0.0158509376869618 7.5 15 2 17 2 NM_008973 refGene chr6 36811209 - 111736 graph_last l 31 112 taaactactt 841 0.0158509376869618 7.5 15 2 17 2 NM_146087 refGene chr18 61709666 + 65292 graph_last l 35 105 tatgtgtgtt 842 0.0158509376869618 7.5 15 2 17 2 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 843 0.0166947345887646 3.375 27 8 30 8 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 844 0.0166947345887646 3.375 27 8 30 8 tgtaagtctg 845 0.0166947345887646 3.375 27 8 30 8 AK122383 knownGene chr4 149172714 - 99491 graph_last l 79 157 caaaatgttt 846 0.0181682218270001 0.227272727272727 5 22 6 22 atgatggtag 847 0.0183381557215384 0.176470588235294 3 17 3 17 ctggaagagg 848 0.0183381557215384 0.176470588235294 3 17 3 17 gtggcacaca 849 0.0183381557215384 0.176470588235294 3 17 3 17 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 850 0.0183381557215384 0.310344827586207 9 29 10 29 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 851 0.0184539218798666 0.534246575342466 39 73 43 73 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 852 0.0184735896250765 Inf 10 0 11 0 NM_133218 refGene chr3 9563925 - 82994 graph_last l 10 33 aagtaagtct 853 0.0184735896250765 Inf 10 0 11 0 NM_010497 refGene chr1 66764681 + 3174 graph_last 1 20 acagttaatt 854 0.0184735896250765 Inf 10 0 11 0 agctcttgta 855 0.0184735896250765 Inf 10 0 11 0 NM_172275 refGene chr5 120112769 - 106607 graph_last l 26 94 aggacggagg 856 0.0184735896250765 Inf 10 0 11 0 agtggtcaag 857 0.0184735896250765 5.66666666666667 17 3 19 3 atttttgtat 858 0.0184735896250765 Inf 10 0 11 0 NM_177088 refGene chr11 106444277 + 24538 graph_last l 19 56 ctaaaaagtg 859 0.0184735896250765 Inf 10 0 11 0 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 860 0.0184735896250765 Inf 10 0 11 0 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 861 0.0184735896250765 Inf 10 0 11 0 ctttacctag 862 0.0184735896250765 Inf 10 0 11 0 NM_134037 refGene chr11 100060301 + 23847 graph_last 1 23 gaacatttca 863 0.0184735896250765 Inf 10 0 11 0 gacaaaggtg 864 0.0184735896250765 Inf 10 0 11 0 gacgagatgg 865 0.0184735896250765 Inf 10 0 11 0 NM_023279 refGene chr8 125273626 - 134257 graph_last l 4 35 gagtgggggt 866 0.0184735896250765 Inf 10 0 11 0 NM_134012 refGene chr11 93530498 + 23125 graph_last 3 46 gatgtgaaaa 867 0.0184735896250765 Inf 10 0 11 0 NM_011975 refGene chr7 101561513 - 124129 graph_last 2 38 gcggtggcag 868 0.0184735896250765 Inf 10 0 11 0 tcacaatgag 869 0.0184735896250765 Inf 10 0 11 0 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 870 0.0184735896250765 Inf 10 0 11 0 tgtaaataaa 871 0.0184735896250765 Inf 10 0 11 0 NM_053187 refGene chr10 54311526 - 12388 graph_last l 2 11 ttaactggta 872 0.0184735896250765 Inf 10 0 11 0 ttatcctgtc 873 0.0184735896250765 Inf 10 0 11 0 NM_029979 refGene chr14 58039927 + 42269 graph_last l 27 94 tttgctgtgt 874 0.0184735896250765 5.66666666666667 17 3 19 3 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 875 0.0184744684903997 4 24 6 26 6 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 876 0.0184744684903997 4 24 6 26 6 ggtcagtcgg 877 0.0184744684903997 4 24 6 26 6 AK038042 knownGene chr11 115842027 - 25204 graph_last l 10 62 attcttaaaa 878 0.0189988392480923 0.25 5 20 5 20 AF065991 knownGene chr10 18743590 - 10634 graph_last l 9 59 aaaaatgttg 879 0.0190140266427483 13 13 1 14 1 aataaaatta 880 0.0190140266427483 13 13 1 14 1 agaagtgttt 881 0.0190140266427483 13 13 1 14 1 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 882 0.0190140266427483 13 13 1 14 1 NM_008568 refGene chr5 136636318 - 107939 graph_last l 5 49 ctgcactttt 883 0.0190140266427483 13 13 1 14 1 gccacttcct 884 0.0190140266427483 13 13 1 14 1 gggcagaggt 885 0.0190140266427483 13 13 1 14 1 gtcacaccac 886 0.0190140266427483 13 13 1 14 1 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 887 0.0190140266427483 4.4 22 5 24 5 NM_027882 refGene chr7 28684262 - 120189 graph_last l 4 31 tatgattacc 888 0.0190140266427483 13 13 1 14 1 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 889 0.0190140266427483 13 13 1 14 1 NM_025407 refGene chr9 111570399 + 141448 graph_last l 67 280 ttctggctgc 890 0.0190140266427483 0.210526315789474 4 19 4 19 NM_026989 refGene chr3 162242549 - 90688 graph_last l 82 209 ttgatgtaca 891 0.0190140266427483 4.4 22 5 24 5 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 892 0.0193161238864899 5 20 4 22 4 aaataacaat 893 0.0195256554027624 0.0833333333333333 1 12 1 12 aacatacaag 894 0.0195256554027624 0 0 9 0 9 NM_172544 refGene chr12 85832071 - 30167 graph_last l 21 50 aacgaaaaag 895 0.0195256554027624 0 0 9 0 9 NM_028982 refGene chr6 136543575 - 117563 graph_last l 13 42 aactttcttc 896 0.0195256554027624 0 0 9 0 9 NM_011221 refGene chr11 6365872 - 17495 graph_last l 44 102 aagtgcagta 897 0.0195256554027624 0.0833333333333333 1 12 1 12 aatgagacaa 898 0.0195256554027624 0.0833333333333333 1 12 1 12 NM_008924 refGene chr9 111368745 + 141428 graph_last l 2 16 aatgtcatct 899 0.0195256554027624 0 0 9 0 9 NM_011129 refGene chr11 87150159 + 22798 graph_last l 63 154 acccggctag 900 0.0195256554027624 0.0833333333333333 1 12 1 12 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 901 0.0195256554027624 0.0833333333333333 1 12 1 12 CB519655 all_est chr9 46897751 + 137195 graph_last l 6 40 agaacaaagc 902 0.0195256554027624 0 0 9 0 9 atctcgagag 903 0.0195256554027624 0 0 9 0 9 NM_020011 refGene chr4_random 73490 + 99862 graph_last 13 36 atgcagacaa 904 0.0195256554027624 0 0 9 0 9 attttgtaaa 905 0.0195256554027624 0 0 9 0 9 NM_019681 refGene chr2 31565697 - 73338 graph_last l 17 66 ccacacctac 906 0.0195256554027624 0.0833333333333333 1 12 1 12 NM_008747 refGene chr12 17052716 + 26467 graph_last l 24 54 ccattactaa 907 0.0195256554027624 0 0 9 0 9 genomic chr4 136999969 + 0 unique_long l 13 41 cctatacgtc 908 0.0195256554027624 0 0 9 0 9 NM_008131 refGene chr1 157362291 + 7351 graph_last 22 65 cgggaggaga 909 0.0195256554027624 0 0 9 0 9 NM_011668 refGene chr7 52384572 + 121425 graph_last 3 26 ctgtaaacaa 910 0.0195256554027624 0 0 9 0 9 NM_019840 refGene chr4 101465240 + 95522 graph_last l 20 39 ctgtcttgcc 911 0.0195256554027624 0 0 9 0 9 BC056493 mgcGenes chr7 131796488 + 125929 graph_second l 2 24 gaaggctgat 912 0.0195256554027624 0 0 9 0 9 CA320703 all_est chr2 22896745 + 72631 graph_last l 46 101 gacaaaggat 913 0.0195256554027624 0 0 9 0 9 NM_007428 refGene chr8 126355749 - 134353 graph_last 1 45 gagacaaggc 914 0.0195256554027624 0 0 9 0 9 NM_007920 refGene chr14 71063383 - 43051 graph_second l 5 34 gaggcagccg 915 0.0195256554027624 0 0 9 0 9 NM_008989 refGene chr18 36470200 + 63957 graph_last l 10 43 gatctcaagg 916 0.0195256554027624 0 0 9 0 9 gatgacttca 917 0.0195256554027624 0 0 9 0 9 NM_011308 refGene chr11 61888988 - 20613 graph_last l 3 22 gatgaggaag 918 0.0195256554027624 0 0 9 0 9 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 919 0.0195256554027624 0.0833333333333333 1 12 1 12 genomic chr5 71741604 + 0 unique_long l 3 17 gcagacattt 920 0.0195256554027624 0 0 9 0 9 genomic chr7 114718440 + 0 unique_long l 65 101 gctatttgcc 921 0.0195256554027624 0 0 9 0 9 NM_010777 refGene chr18 82252688 + 66444 graph_last l 22 41 gcttcctccc 922 0.0195256554027624 0 0 9 0 9 ggagagctgt 923 0.0195256554027624 0 0 9 0 9 NM_172890 refGene chr6 116009543 + 116186 graph_last l 18 93 gggctgggta 924 0.0195256554027624 0 0 9 0 9 NM_178405 refGene chr1 176133952 - 8552 graph_last l 17 86 ggggttgccc 925 0.0195256554027624 0 0 9 0 9 NM_026385 refGene chr8 95958860 - 132518 graph_last l 37 92 gggttaatgg 926 0.0195256554027624 0 0 9 0 9 genomic chr13 108676482 + 0 unique_long l 2 29 ggttgattct 927 0.0195256554027624 0 0 9 0 9 gtacttttaa 928 0.0195256554027624 0 0 9 0 9 gtggctacaa 929 0.0195256554027624 0 0 9 0 9 NM_026167 refGene chrX 21878141 - 147663 graph_last l 11 63 gtttcccttc 930 0.0195256554027624 0 0 9 0 9 NM_019867 refGene chr1 89381889 - 4414 graph_last l 45 112 gttttgagaa 931 0.0195256554027624 0.0833333333333333 1 12 1 12 NM_080853 refGene chr7 44476348 + 121164 graph_last l 6 19 taaacatatc 932 0.0195256554027624 0 0 9 0 9 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 933 0.0195256554027624 0 0 9 0 9 tagacaaagg 934 0.0195256554027624 0.34375 11 32 12 32 NM_018770 refGene chr9 49856825 + 137345 graph_second l 11 56 tcgttgaaag 935 0.0195256554027624 0.0833333333333333 1 12 1 12 tctaagtacg 936 0.0195256554027624 0.0833333333333333 1 12 1 12 genomic chr11 56926805 + 0 unique_long l 3 16 tgatcagatc 937 0.0195256554027624 0 0 9 0 9 tgcttatacc 938 0.0195256554027624 0 0 9 0 9 tgtatacaca 939 0.0195256554027624 0 0 9 0 9 tgtgaatgat 940 0.0195256554027624 2.69230769230769 35 13 39 13 NM_053273 refGene chr11 114226558 + 24996 graph_last b 4 56 ttcgccctcc 941 0.0195256554027624 0.0833333333333333 1 12 1 12 AK078137 knownGene chr7_random 15129423 + 126817 graph_last l 16 36 ttgccaatca 942 0.0195256554027624 0 0 9 0 9 NM_146128 refGene chr2 157390043 + 80791 graph_last l 129 258 ttgtgagaat 943 0.0195256554027624 3 30 10 33 10 NM_080555 refGene chr4 104092441 - 95672 graph_last l 16 40 tttagtttct 944 0.0195256554027624 0 0 9 0 9 tttttgtttc 945 0.0195256554027624 0 0 9 0 9 NM_009429 refGene chr14 67419261 + 42807 graph_last 0 40 ttttttaagg 946 0.0195256554027624 0 0 9 0 9 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 947 0.0196199579876716 0.470588235294118 24 51 26 51 gtacatactg 948 0.0205407619131298 0.458333333333333 22 48 24 48 ccccagccag 949 0.0214218806190771 1.5625 125 80 138 80 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 950 0.0221878924895255 0.333333333333333 10 30 11 30 tgtatttata 951 0.0230576475831536 3.25 26 8 29 8 NM_011889 refGene chr15 83848784 + 48775 graph_last 10 98 gtgtacatac 952 0.0239702178744967 0.260869565217391 6 23 7 23 tgcgtgctgg 953 0.0239702178744967 0.260869565217391 6 23 7 23 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 954 0.0244691826012881 7 14 2 16 2 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 955 0.0244691826012881 7 14 2 16 2 tttatataaa 956 0.0244691826012881 7 14 2 16 2 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 957 0.0248580610232098 2.90909090909091 32 11 35 11 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 958 0.0248992801743367 0.142857142857143 2 14 2 14 ctcccatcct 959 0.0248992801743367 0.142857142857143 2 14 2 14 gcgaaggctg 960 0.0248992801743367 3.42857142857143 24 7 27 7 NM_053167 refGene chr12 66135881 - 28631 graph_last l 46 133 gctgggccgc 961 0.0248992801743367 0.142857142857143 2 14 2 14 NM_175543 refGene chr11 79268990 + 22077 graph_last l 39 112 gggctgggcc 962 0.0248992801743367 0.142857142857143 2 14 2 14 NM_007636 refGene chr10 120033751 - 16078 graph_last l 83 199 ggtctaattt 963 0.0248992801743367 3.42857142857143 24 7 27 7 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 964 0.0248992801743367 0.142857142857143 2 14 2 14 NM_016891 refGene chr17 20487719 - 57555 graph_last l 15 63 gttggggttg 965 0.0248992801743367 0.142857142857143 2 14 2 14 NM_177266 refGene chr13 95451159 - 37146 graph_last l 94 139 taaattaaga 966 0.0248992801743367 0.142857142857143 2 14 2 14 AK084868 knownGene chr9 101908059 - 140708 graph_last l 2 63 ttctctgctc 967 0.0248992801743367 0.142857142857143 2 14 2 14 BC050918 knownGene chr2 134737392 - 79417 graph_last l 33 85 ttgacctcag 968 0.0248992801743367 0.142857142857143 2 14 2 14 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 969 0.0248992801743367 3.42857142857143 24 7 27 7 gtggcgcacg 970 0.0250877193023181 0.4 14 35 15 35 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 971 0.025275525538262 0.584269662921348 52 89 58 90 atactgaagc 972 0.0257935008831390 1.88235294117647 64 34 71 34 NM_025893 refGene chrX 125568990 + 151577 graph_last l 56 146 ggcccacatc 973 0.0263171436469275 0.238095238095238 5 21 6 21 caaatgaagt 974 0.0279378473035694 5.33333333333333 16 3 18 3 cagttggttc 975 0.0279378473035694 5.33333333333333 16 3 18 3 NM_009803 refGene chr1 175076870 - 8438 graph_last l 16 77 gaaagaggga 976 0.0279378473035694 5.33333333333333 16 3 18 3 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 977 0.0279378473035694 5.33333333333333 16 3 18 3 NM_008254 refGene chr4 134747711 - 98101 graph_last l 46 180 tggttttggg 978 0.0279378473035694 5.33333333333333 16 3 18 3 ggagatttta 979 0.0281942286370990 0.1875 3 16 3 16 NM_019715 refGene chr6 73928344 + 113915 graph_last 1 91 tctaaaaaaa 980 0.0281942286370990 0.1875 3 16 3 16 NM_010398 refGene chr17 34913504 + 58954 graph_last l 34 154 ccagaggact 981 0.0293050248660687 4.75 19 4 21 4 NM_174997 refGene chr1 35501828 - 1439 graph_last l 16 91 gaacttatgt 982 0.0293050248660687 4.75 19 4 21 4 NM_130863 refGene chr19_random 15495020 - 71388 graph_last l 31 106 accccttgtg 983 0.0293645557100131 0.222222222222222 4 18 4 18 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 984 0.0293645557100131 0.222222222222222 4 18 4 18 ttaaatgcaa 985 0.0293645557100131 0.222222222222222 4 18 4 18 NM_025768 refGene chr8 13869653 + 128105 graph_last l 68 188 ttgatcccca 986 0.0293645557100131 0.222222222222222 4 18 4 18 NM_013625 refGene chr11 74245276 - 21502 graph_last l 54 207 ttttctgcat 987 0.030060154573705 0.428571428571429 18 42 20 42 NM_007410 refGene chr3 142379543 + 89786 graph_last l 11 62 aactaggcaa 988 0.0306714963294713 12 12 1 13 1 NM_025543 refGene chr2 153430747 + 80394 graph_last l 9 22 aagacaatac 989 0.0306714963294713 Inf 9 0 10 0 BB674281 all_est chr3 90690195 + 86687 graph_last 0 19 aattaatcaa 990 0.0306714963294713 Inf 9 0 10 0 NM_011751 refGene chr11 79977099 + 22170 graph_last l 10 40 aatttggtcg 991 0.0306714963294713 Inf 9 0 10 0 acacttgcta 992 0.0306714963294713 12 12 1 13 1 NM_173364 refGene chr9 125233362 - 142346 graph_last l 15 50 acataagagt 993 0.0306714963294713 12 12 1 13 1 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 994 0.0306714963294713 12 12 1 13 1 NM_153581 refGene chr8 55141907 - 130191 graph_last l 13 35 actagtagtt 995 0.0306714963294713 Inf 9 0 10 0 atgcgagtga 996 0.0306714963294713 12 12 1 13 1 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 997 0.0306714963294713 Inf 9 0 10 0 catcttcgcc 998 0.0306714963294713 Inf 9 0 10 0 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 999 0.0306714963294713 12 12 1 13 1 AK032339 knownGene chr17 32966326 - 58719 graph_last 2 22 ccctgactgt 1000 0.0306714963294713 Inf 9 0 10 0 NM_177699 refGene chr8 106838263 + 132950 graph_last l 55 134 cctggagcag 1001 0.0306714963294713 Inf 9 0 10 0 NM_009366 refGene chr14 68082376 - 42852 graph_last l 29 66 cgcagaacga 1002 0.0306714963294713 Inf 9 0 10 0 NM_133839 refGene chr2 50612691 - 74446 graph_last l 12 38 ctgaacacat 1003 0.0306714963294713 Inf 9 0 10 0 ctggtaacac 1004 0.0306714963294713 Inf 9 0 10 0 NM_182650 refGene chr6 51936062 - 112726 graph_last l 32 83 gacaagtata 1005 0.0306714963294713 12 12 1 13 1 NM_008708 refGene chr2 3247329 + 71475 graph_last l 19 63 gacattagtc 1006 0.0306714963294713 Inf 9 0 10 0 NM_007715 refGene chr5 76660419 + 104001 graph_last l 10 48 gacttaccaa 1007 0.0306714963294713 Inf 9 0 10 0 NM_009030 refGene chr4 128222930 + 97446 graph_last l 13 60 gagagtaaca 1008 0.0306714963294713 Inf 9 0 10 0 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 1009 0.0306714963294713 Inf 9 0 10 0 NM_146170 refGene chr6 87849266 + 114579 graph_last 2 22 gccacgtata 1010 0.0306714963294713 Inf 9 0 10 0 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 1011 0.0306714963294713 Inf 9 0 10 0 gggatgctct 1012 0.0306714963294713 12 12 1 13 1 NM_053086 refGene chr19 46247002 - 70153 graph_last 19 70 gtcaaagttc 1013 0.0306714963294713 12 12 1 13 1 NM_010721 refGene chr18 57123858 + 65070 graph_last 2 19 gtgactagat 1014 0.0306714963294713 Inf 9 0 10 0 gtgcttataa 1015 0.0306714963294713 Inf 9 0 10 0 NM_153563 refGene chr3 110751711 - 88229 graph_last l 16 90 gtggggtttt 1016 0.0306714963294713 12 12 1 13 1 NM_019656 refGene chrX 122382236 - 151413 graph_last l 8 33 gtggtaccag 1017 0.0306714963294713 Inf 9 0 10 0 AK129215 knownGene chr3 152719953 - 90280 graph_last l 7 51 taaattgttt 1018 0.0306714963294713 Inf 9 0 10 0 taacagctac 1019 0.0306714963294713 Inf 9 0 10 0 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 1020 0.0306714963294713 12 12 1 13 1 tacttgtatg 1021 0.0306714963294713 12 12 1 13 1 NM_199143 refGene chr6 55350900 + 112950 graph_last 1 13 tagagctgtc 1022 0.0306714963294713 Inf 9 0 10 0 NM_145393 refGene chr4 130860643 - 97687 graph_last 13 40 tagtgaatgt 1023 0.0306714963294713 Inf 9 0 10 0 tatagtctat 1024 0.0306714963294713 12 12 1 13 1 NM_023040 refGene chr17 24287017 - 57817 graph_last l 17 55 tcagcagagg 1025 0.0306714963294713 Inf 9 0 10 0 NM_025650 refGene chr10 82754685 - 14090 graph_last l 6 34 tctgtttctg 1026 0.0306714963294713 Inf 9 0 10 0 tggctcggtc 1027 0.0306714963294713 1.62295081967213 99 61 110 61 ttgagaatga 1028 0.0306714963294713 12 12 1 13 1 NM_008500 refGene chr2 36354993 - 73731 graph_last l 6 28 ttgtgctttg 1029 0.0306714963294713 Inf 9 0 10 0 NM_008996 refGene chr11 20125068 - 18028 graph_last 0 18 ttttcattta 1030 0.0306714963294713 Inf 9 0 10 0 tttttcccaa 1031 0.0306714963294713 Inf 9 0 10 0 gccgttctta 1032 0.0326677058618198 2.375 38 16 42 16 NM_016711 refGene chr9 78100348 - 139564 graph_last l 18 77 agaagttagt 1033 0.0331932578702824 0.090909090909091 1 11 1 11 NM_024244 refGene chr10 72345115 - 13443 graph_last l 41 99 agttaaatcc 1034 0.0331932578702824 0.090909090909091 1 11 1 11 NM_022029 refGene chr9 38323536 + 136533 graph_second l 27 60 cacacgcaga 1035 0.0331932578702824 0.090909090909091 1 11 1 11 BC049262 knownGene chr10 101640310 + 15243 graph_last l 19 47 gagatgcaac 1036 0.0331932578702824 0.090909090909091 1 11 1 11 ggatatgtgg 1037 0.0331932578702824 0.090909090909091 1 11 1 11 ggcagccccc 1038 0.0331932578702824 0.090909090909091 1 11 1 11 NM_182716 refGene chr1 135449108 - 6266 graph_last l 16 67 ggggtctgcc 1039 0.0331932578702824 0.090909090909091 1 11 1 11 NM_033524 refGene chr2 117450936 + 78241 graph_last l 18 37 tacgtgtagg 1040 0.0331932578702824 0.090909090909091 1 11 1 11 NM_008671 refGene chrX 93088958 - 150492 graph_last l 63 109 tgagttacag 1041 0.0331932578702824 0.090909090909091 1 11 1 11 tttgcagcat 1042 0.0331932578702824 0.090909090909091 1 11 1 11 tttttggtgt 1043 0.0341406630906436 2.72727272727273 30 11 33 11 aaaccccccc 1044 0.0352693826436569 0 0 8 0 8 aagatgcatt 1045 0.0352693826436569 0 0 8 0 8 genomic chr9 44684175 - 0 unique_long l 7 35 aaggagagtt 1046 0.0352693826436569 0 0 8 0 8 NM_020494 refGene chr12 98978887 - 30809 graph_last l 10 43 aaggtgaagg 1047 0.0352693826436569 0 0 8 0 8 aatttaaaac 1048 0.0352693826436569 0 0 8 0 8 NM_013509 refGene chr6 126683741 - 116901 graph_last l 35 99 accaagtttg 1049 0.0352693826436569 0 0 8 0 8 genomic chr5 115085998 + 0 unique_long l 7 31 acccagccgg 1050 0.0352693826436569 0 0 8 0 8 acctggctgg 1051 0.0352693826436569 0 0 8 0 8 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 1052 0.0352693826436569 0 0 8 0 8 CA316586 all_est chr6 30663632 + 111294 graph_last l 19 56 agaggagctg 1053 0.0352693826436569 0 0 8 0 8 BC017628 knownGene chr16 43837608 - 53842 graph_last 0 83 aggaaccaaa 1054 0.0352693826436569 0 0 8 0 8 NM_011245 refGene chr9 92411079 + 140177 graph_last l 26 69 aggctgttct 1055 0.0352693826436569 0 0 8 0 8 aggtccagag 1056 0.0352693826436569 0 0 8 0 8 agtgagacca 1057 0.0352693826436569 0 0 8 0 8 NM_009382 refGene chr9 45814049 + 137031 graph_second l 11 23 agttcagcct 1058 0.0352693826436569 0 0 8 0 8 NM_019392 refGene chr2 120088134 + 78448 graph_last l 17 40 atgaccctta 1059 0.0352693826436569 0 0 8 0 8 NM_010223 refGene chr8 70775594 + 130947 graph_last 0 93 atgccccgcg 1060 0.0352693826436569 0 0 8 0 8 NM_009721 refGene chr1 167488001 - 7965 graph_last l 32 73 atgcctccag 1061 0.0352693826436569 0 0 8 0 8 NM_028889 refGene chr1 89216245 + 4392 graph_last l 19 50 caaatgatct 1062 0.0352693826436569 0 0 8 0 8 caagttacat 1063 0.0352693826436569 0 0 8 0 8 cacagctctg 1064 0.0352693826436569 0 0 8 0 8 NM_177379 refGene chr9 32958080 + 136212 graph_last l 33 60 cagaatgagc 1065 0.0352693826436569 0 0 8 0 8 cagccacgcg 1066 0.0352693826436569 0 0 8 0 8 NM_009458 refGene chr11 51622985 - 19798 graph_second l 8 29 cagtggaatg 1067 0.0352693826436569 0 0 8 0 8 cagttacaga 1068 0.0352693826436569 0 0 8 0 8 genomic chr12 103766563 + 0 unique_long l 6 46 cattttgttt 1069 0.0352693826436569 0 0 8 0 8 CA536941 all_est chr2 112471424 + 77931 graph_last l 14 57 ccgagctgtg 1070 0.0352693826436569 0 0 8 0 8 AK083224 knownGene chr14 86523813 - 43463 graph_last l 39 63 cgtccaggtt 1071 0.0352693826436569 0 0 8 0 8 AK035022 knownGene chr5 123608764 + 107004 graph_last l 12 26 ctactctata 1072 0.0352693826436569 0 0 8 0 8 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 1073 0.0352693826436569 0 0 8 0 8 NM_009224 refGene chr7 38523465 + 120795 graph_last l 72 177 ctcctaatct 1074 0.0352693826436569 3.42857142857143 24 7 26 7 genomic chr19 23311685 + 0 unique_long l 14 27 ctttctgata 1075 0.0352693826436569 0 0 8 0 8 NM_026056 refGene chr13 46700121 + 34569 graph_last l 5 16 cttttacaca 1076 0.0352693826436569 0 0 8 0 8 NM_010595 refGene chr6 128570111 - 117035 graph_last l 14 43 gagatcgaag 1077 0.0352693826436569 0 0 8 0 8 gaggagaaga 1078 0.0352693826436569 1.70212765957447 80 47 89 47 gcacagtatc 1079 0.0352693826436569 0 0 8 0 8 NM_010777 refGene chr18 82282177 + 66444 graph_last l 85 112 gcgagacgct 1080 0.0352693826436569 0 0 8 0 8 NM_026066 refGene chr14 46025635 + 41337 graph_last l 32 88 gctgcagcgt 1081 0.0352693826436569 0 0 8 0 8 NM_010817 refGene chr8 109113841 - 133214 graph_last l 14 33 gcttgaaggg 1082 0.0352693826436569 0 0 8 0 8 ggagctgtgg 1083 0.0352693826436569 0 0 8 0 8 ggcatcacaa 1084 0.0352693826436569 0 0 8 0 8 NM_175514 refGene chr2 84247209 + 76272 graph_last l 32 80 ggcgggaagc 1085 0.0352693826436569 0 0 8 0 8 AJ401376 knownGene chr4 128056497 + 97428 graph_last l 15 39 ggtaccccca 1086 0.0352693826436569 0 0 8 0 8 genomic chr18 82274993 + 0 unique_long l 8 26 ggttgtcagg 1087 0.0352693826436569 0 0 8 0 8 NM_172544 refGene chr12 85830976 + 30167 graph_last l 23 42 gtatgtttga 1088 0.0352693826436569 0 0 8 0 8 NM_153103 refGene chr11 70301571 + 21166 graph_last 2 30 gtgcgatgct 1089 0.0352693826436569 0 0 8 0 8 NM_145501 refGene chr19 42171628 + 69870 graph_last l 19 39 gtggtagccc 1090 0.0352693826436569 0 0 8 0 8 NM_080555 refGene chr4 104091991 + 95672 graph_last l 16 44 taaccatctg 1091 0.0352693826436569 0 0 8 0 8 NM_009722 refGene chr5 121481038 - 106753 graph_last l 11 30 tacagtgttc 1092 0.0352693826436569 0 0 8 0 8 BE860741 all_est chrX 155602205 - 152797 graph_last l 5 18 tacataattt 1093 0.0352693826436569 0 0 8 0 8 NM_010595 refGene chr6 128566497 - 117035 graph_last l 9 49 tagggcccta 1094 0.0352693826436569 0 0 8 0 8 tctaaaaaag 1095 0.0352693826436569 0 0 8 0 8 tgccaaaaaa 1096 0.0352693826436569 0 0 8 0 8 NM_019632 refGene chr2 149092193 - 80110 graph_last l 6 23 tgcgtgcaga 1097 0.0352693826436569 0 0 8 0 8 tgtataaaaa 1098 0.0352693826436569 1.60655737704918 98 61 108 61 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 1099 0.0352693826436569 0 0 8 0 8 NM_008990 refGene chr7 16667851 - 119346 graph_last 27 70 tttataagtt 1100 0.0352693826436569 0 0 8 0 8 ctatttcaaa 1101 0.0368020467774995 2.8 28 10 31 10 aatttcccct 1102 0.0368129229028967 7 14 2 15 2 agtcctggat 1103 0.0368129229028967 7 14 2 15 2 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 1104 0.0368129229028967 7 14 2 15 2 ctgcctgaga 1105 0.0368129229028967 7 14 2 15 2 gaacttaaag 1106 0.0368129229028967 7 14 2 15 2 AK129454 knownGene chr11 23472540 - 18292 graph_last l 15 56 gacaggcatt 1107 0.0368129229028967 7 14 2 15 2 gagaacttgc 1108 0.0368129229028967 7 14 2 15 2 NM_199310 refGene chr2 119288454 - 78348 graph_last l 37 89 taaagtttga 1109 0.0368129229028967 7 14 2 15 2 NM_010347 refGene chr10 83937811 + 14221 graph_last 53 253 tactatgaga 1110 0.0371304792307789 0.465116279069767 20 43 22 43 atggcttaat 1111 0.0371526532409926 3.66666666666667 22 6 24 6 ccatttgagc 1112 0.0371526532409926 3.66666666666667 22 6 24 6 NM_011655 refGene chr17 35501335 - 58992 graph_last l 23 98 ctcctcctgc 1113 0.0371526532409926 3.66666666666667 22 6 24 6 NM_008155 refGene chr7 27846513 - 120117 graph_last l 101 331 ttgttctgac 1114 0.0376275645038596 0.366666666666667 11 30 12 30 caaaatacat 1115 0.0378802844207636 1.90322580645161 59 31 65 31 NM_008155 refGene chr7 27846456 - 120117 graph_second l 139 422 ggggctcagc 1116 0.0378802844207636 0.25 5 20 6 20 NM_145544 refGene chr3 142849874 - 89852 graph_last l 101 164 taagtgaaaa 1117 0.0378802844207636 0.25 5 20 6 20 NM_026161 refGene chr2 91506459 + 76781 graph_last l 63 250 actgcctgct 1118 0.0392865228296970 0.40625 13 32 14 32 NM_153457 refGene chr12 68119077 + 28767 graph_last l 53 116 cacttttttt 1119 0.039352718579683 0.153846153846154 2 13 2 13 ccaaaaaaaa 1120 0.039352718579683 0.489361702127660 23 47 25 47 ctccactatg 1121 0.039352718579683 0.153846153846154 2 13 2 13 gcagatggca 1122 0.039352718579683 0.153846153846154 2 13 2 13 AW047650 all_est chr7 131818928 + 125930 graph_last l 32 95 gcgccctgat 1123 0.039352718579683 0.153846153846154 2 13 2 13 NM_177267 refGene chr12 76327993 + 29383 graph_last 0 50 gtcagtgtct 1124 0.039352718579683 0.153846153846154 2 13 2 13 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 1125 0.039352718579683 0.153846153846154 2 13 2 13 NM_013873 refGene chr15 85743411 + 48930 graph_second l 58 114 tgtggttcca 1126 0.039352718579683 0.153846153846154 2 13 2 13 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 1127 0.0398093976096551 4 20 5 22 5 attaatcaaa 1128 0.0406336491072947 5 15 3 17 3 cacaaaataa 1129 0.0406336491072947 5 15 3 17 3 ctctatttaa 1130 0.0406336491072947 5 15 3 17 3 gtgatgttgc 1131 0.0406336491072947 5 15 3 17 3 gtgtctcaca 1132 0.0406336491072947 5 15 3 17 3 NM_007896 refGene chr2 154393537 + 80505 graph_last 37 126 ctctgtggaa 1133 0.041915175799669 4.5 18 4 20 4 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 1134 0.041915175799669 4.5 18 4 20 4 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 1135 0.041915175799669 4.25 17 4 19 4 AK076321 knownGene chr9 61996920 + 138255 graph_last l 15 90 gtggagattg 1136 0.041915175799669 4.5 18 4 20 4 NM_153053 refGene chr3 98878996 + 87421 graph_last l 31 87 tatagaaaaa 1137 0.041915175799669 4.25 17 4 19 4 NM_013896 refGene chr12 67019406 - 28702 graph_last l 21 91 tatgagatag 1138 0.041915175799669 4.5 18 4 20 4 NM_010160 refGene chr2 6463548 - 71738 graph_last l 23 80 ttggtgcttc 1139 0.041915175799669 4.25 17 4 19 4 NM_010925 refGene chr10 80555240 - 13897 graph_last l 9 108 acctgcatct 1140 0.0426065647813292 0.2 3 15 3 15 NM_008691 refGene chr14 59839646 + 42397 graph_last l 111 177 ggaaaaatag 1141 0.0426065647813292 0.2 3 15 3 15 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 1142 0.0426065647813292 0.2 3 15 3 15 NM_008169 refGene chr2 25557785 - 72823 graph_last l 60 152 actagctctc 1143 0.0431608913650422 0.235294117647059 4 17 4 17 gtggctcata 1144 0.0446856768567761 0.435897435897436 17 39 19 39 NM_021477 refGene chr16 6893361 + 51276 graph_last l 53 152 ttagcaactc 1145 0.0449162137591643 0.304347826086957 7 23 8 23 NM_010887 refGene chr13 113119749 - 38276 graph_last l 27 187 gataatgcac 1146 0.0453901532931412 3 24 8 27 8 gtaagcataa 1147 0.0462382658006866 1.36486486486486 202 148 223 149 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 1148 0.0474197101497966 0.626373626373626 57 91 63 92 tagatcctag 1149 0.0483213519144276 2.53846153846154 33 13 36 13 attaaagccc 1150 0.0486169214781967 11 11 1 12 1 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 1151 0.0486169214781967 11 11 1 12 1 NM_017402 refGene chr8 12540613 + 128028 graph_last l 9 25 ctgatagcac 1152 0.0486169214781967 11 11 1 12 1 cttaaataaa 1153 0.0486169214781967 11 11 1 12 1 NM_133679 refGene chr16 93125087 - 56032 graph_last 3 27 cttttgctat 1154 0.0486169214781967 11 11 1 12 1 gaaaggaaac 1155 0.0486169214781967 11 11 1 12 1 ggagcactgg 1156 0.0486169214781967 11 11 1 12 1 ggctttggtc 1157 0.0486169214781967 11 11 1 12 1 BG069541 all_est chr4 122403918 + 96951 graph_last 0 56 gtggttgaaa 1158 0.0486169214781967 11 11 1 12 1 tatctgtccc 1159 0.0486169214781967 11 11 1 12 1 NM_023324 refGene chr11 21048770 + 18098 graph_last l 5 33 tcaagatctg 1160 0.0486169214781967 11 11 1 12 1 NM_009291 refGene chr9 60478782 - 138120 graph_last l 14 64 tccttttcta 1161 0.0486169214781967 11 11 1 12 1 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 1162 0.0486169214781967 11 11 1 12 1 NM_024220 refGene chr7 89484677 + 123205 graph_last l 28 91 tttggttata 1163 0.0486169214781967 11 11 1 12 1 tttttttttt 1164 0.0486169214781967 11 11 1 12 1 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 1165 0.0493527846706529 2.23529411764706 38 17 42 17 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 1166 0.0502013352066406 3.28571428571429 23 7 25 7 acagggttgg 1167 0.0514572203729633 Inf 8 0 9 0 actataacca 1168 0.0514572203729633 Inf 8 0 9 0 agattattgt 1169 0.0514572203729633 Inf 8 0 9 0 NM_145151 refGene chr7 82371358 + 122878 graph_last l 10 32 agtttgtatt 1170 0.0514572203729633 Inf 8 0 9 0 NM_011342 refGene chr3 100807621 + 87579 graph_last l 7 31 atgcacagat 1171 0.0514572203729633 Inf 8 0 9 0 NM_009322 refGene chr2 62202656 + 75069 graph_last l 25 52 atgtaaccac 1172 0.0514572203729633 Inf 8 0 9 0 NM_175255 refGene chr11 51317474 - 19792 graph_last l 12 36 caaacaatgt 1173 0.0514572203729633 Inf 8 0 9 0 NM_183321 refGene chr7 24520374 - 119945 graph_last 0 22 caacgttgga 1174 0.0514572203729633 Inf 8 0 9 0 cagttgtgag 1175 0.0514572203729633 Inf 8 0 9 0 catctagagg 1176 0.0514572203729633 Inf 8 0 9 0 NM_010699 refGene chr7 39739679 + 120908 graph_last 230 648 ccaaataaaa 1177 0.0514572203729633 1.89655172413793 55 29 61 29 cggagaccct 1178 0.0514572203729633 Inf 8 0 9 0 ctaagtgaca 1179 0.0514572203729633 Inf 8 0 9 0 NM_011283 refGene chr1 4359714 + 62 graph_last 0 7 cttattcttc 1180 0.0514572203729633 Inf 8 0 9 0 gaaggaaaaa 1181 0.0514572203729633 Inf 8 0 9 0 gaatagataa 1182 0.0514572203729633 Inf 8 0 9 0 AF008649 knownGene chr17 36825307 + 59106 graph_last l 173 341 gacagatgga 1183 0.0514572203729633 0.432432432432432 16 37 18 37 NM_146135 refGene chr3 99480130 + 87490 graph_last 0 45 gatacctgct 1184 0.0514572203729633 Inf 8 0 9 0 NM_153161 refGene chr5 136716630 + 107948 graph_last 19 62 gcacgaacat 1185 0.0514572203729633 Inf 8 0 9 0 gcaggcttca 1186 0.0514572203729633 Inf 8 0 9 0 T25556 all_est chr4 126054615 + 97288 graph_last 0 9 ggctaagtag 1187 0.0514572203729633 Inf 8 0 9 0 ggctcaggtg 1188 0.0514572203729633 Inf 8 0 9 0 ggctccgggg 1189 0.0514572203729633 Inf 8 0 9 0 ggctgcagaa 1190 0.0514572203729633 Inf 8 0 9 0 gtgaatagat 1191 0.0514572203729633 Inf 8 0 9 0 NM_010140 refGene chr16 64232989 - 54754 graph_last 1 18 gttcatttag 1192 0.0514572203729633 Inf 8 0 9 0 NM_178378 refGene chr16 32723998 + 52976 graph_last l 8 33 taataaacac 1193 0.0514572203729633 Inf 8 0 9 0 CD536971 all_est chr9 46409029 - 137120 graph_last 0 19 tacatacact 1194 0.0514572203729633 Inf 8 0 9 0 NM_009055 refGene chr8 84957554 - 131780 graph_last l 6 29 tactaaatgc 1195 0.0514572203729633 Inf 8 0 9 0 BC059855 knownGene chr8 71816004 - 131060 graph_last l 21 54 tagccatccc 1196 0.0514572203729633 Inf 8 0 9 0 tatattttct 1197 0.0514572203729633 Inf 8 0 9 0 NM_018871 refGene chr5 134737023 + 107744 graph_last l 30 57 tcactatagc 1198 0.0514572203729633 Inf 8 0 9 0 tcagccatcg 1199 0.0514572203729633 Inf 8 0 9 0 NM_029979 refGene chr14 58039479 - 42269 graph_last 5 18 tcagttgtgg 1200 0.0514572203729633 Inf 8 0 9 0 NM_031870 refGene chr3 157825403 - 90510 graph_last 0 22 tgaagaatac 1201 0.0514572203729633 Inf 8 0 9 0 NM_172787 refGene chr10 27146708 - 11123 graph_last l 6 32 tgatatgaat 1202 0.0514572203729633 Inf 8 0 9 0 NM_008802 refGene chr3 19157145 - 83355 graph_last 1 28 tgtgaaggct 1203 0.0514572203729633 Inf 8 0 9 0 NM_020491 refGene chr19 5586146 - 67586 graph_last l 16 50 tgtgcaccct 1204 0.0514572203729633 Inf 8 0 9 0 NM_029653 refGene chr13 60545975 + 35479 graph_last l 9 16 ttaccatatc 1205 0.0514572203729633 Inf 8 0 9 0 NM_178628 refGene chr12 65856222 - 28595 graph_last 5 39 ttagaagtga 1206 0.0514572203729633 Inf 8 0 9 0 gatttctgtc 1207 0.0541754316004862 3.5 21 6 23 6 NM_029815 refGene chr2 170961182 - 81776 graph_last l 26 78 aattcccaac 1208 0.0546976973553067 0.1 1 10 1 10 BB042952 all_est chr17 27384834 - 58161 graph_last l 35 74 agcttccagc 1209 0.0546976973553067 0.1 1 10 1 10 NM_153529 refGene chr13 36703885 - 33999 graph_last l 49 153 aggggccggt 1210 0.0546976973553067 0.1 1 10 1 10 attgtgtaat 1211 0.0546976973553067 0.1 1 10 1 10 cctttgatcc 1212 0.0546976973553067 0.1 1 10 1 10 gacacccagg 1213 0.0546976973553067 0.1 1 10 1 10 NM_173748 refGene chr11 6091361 - 17451 graph_last l 24 51 gcccgccagg 1214 0.0546976973553067 0.1 1 10 1 10 NM_008095 refGene chr5 128802540 - 107251 graph_last l 24 81 gctggctagg 1215 0.0546976973553067 0.1 1 10 1 10 NM_026524 refGene chrX 9266852 + 147223 graph_last l 45 103 ggagggcagc 1216 0.0546976973553067 0.1 1 10 1 10 NM_011590 refGene chr1 138224485 - 6508 graph_last l 16 70 gttgggtccg 1217 0.0546976973553067 0.1 1 10 1 10 NM_172290 refGene chr9 29662068 - 136058 graph_last l 12 43 tcagagacat 1218 0.0546976973553067 0.1 1 10 1 10 genomic chr17 87403253 + 0 unique_long l 5 29 tccactctct 1219 0.0546976973553067 0.1 1 10 1 10 NM_011844 refGene chr6 90281126 + 114831 graph_last 41 102 tgagcatcgg 1220 0.0546976973553067 0.1 1 10 1 10 NM_011116 refGene chr7 21072633 - 119593 graph_last l 50 113 tgcgtatgtg 1221 0.0546976973553067 0.1 1 10 1 10 ttatatagtg 1222 0.0546976973553067 0.1 1 10 1 10 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 1223 0.056579454682658 2.77777777777778 25 9 28 9 gtggcgcaca 1224 0.056579454682658 0.263157894736842 5 19 6 19 NM_013725 refGene chr7 38100510 - 120754 graph_last 141 373 tctgtgcacc 1225 0.056579454682658 2.77777777777778 25 9 28 9 NM_153581 refGene chr8 55142237 + 130191 graph_last l 380 809 gagtgctttg 1226 0.057176662536646 1.63265306122449 80 49 89 49 caatgctgcc 1227 0.0574561751595754 6.5 13 2 14 2 genomic chr7 57187756 + 0 unique_long l 35 88 cagctgaccc 1228 0.0574561751595754 6.5 13 2 14 2 cctgaatgac 1229 0.0574561751595754 6.5 13 2 14 2 gaacatattt 1230 0.0574561751595754 6.5 13 2 14 2 NM_013897 refGene chr9 52641811 + 137562 graph_last l 39 114 gaactatgtt 1231 0.0574561751595754 6.5 13 2 14 2 tctgttagct 1232 0.0574561751595754 6.5 13 2 14 2 NM_198942 refGene chr17 80944018 - 61440 graph_last l 6 44 tgagtaagaa 1233 0.0574561751595754 6.5 13 2 14 2 tggacatttg 1234 0.0574561751595754 6.5 13 2 14 2 ccaggagagg 1235 0.0584235371456966 3.8 19 5 21 5 NM_010193 refGene chr9 65145351 - 138457 graph_last 18 100 gcaattgaca 1236 0.0584235371456966 3.8 19 5 21 5 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 1237 0.0584235371456966 3.8 19 5 21 5 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 1238 0.0600612175600278 1.83870967741935 57 31 63 31 aaaagaggaa 1239 0.0602721880100644 0 0 7 0 7 genomic chr10 111016085 - 0 unique_long l 3 14 aaaagatgaa 1240 0.0602721880100644 0 0 7 0 7 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 1241 0.0602721880100644 0 0 7 0 7 NM_007733 refGene chr1 24941145 + 1003 graph_last l 18 39 aacctacaag 1242 0.0602721880100644 0 0 7 0 7 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 1243 0.0602721880100644 0 0 7 0 7 NM_011861 refGene chr17 27340445 + 58149 graph_last l 49 144 aactggccgc 1244 0.0602721880100644 0 0 7 0 7 genomic chr11 22872104 + 0 unique_long l 15 28 aagagtggct 1245 0.0602721880100644 0 0 7 0 7 genomic chr7 114715612 + 0 unique_long l 15 27 aatcagacct 1246 0.0602721880100644 0 0 7 0 7 NM_016744 refGene chr2 80196841 - 76137 graph_last l 49 73 acaacctatg 1247 0.0602721880100644 0 0 7 0 7 NM_009129 refGene chr1 81220289 + 3857 graph_last l 16 30 accattagat 1248 0.0602721880100644 0 0 7 0 7 NM_011857 refGene chr8 48179124 - 129903 graph_last 2 24 acccctctgt 1249 0.0602721880100644 0 0 7 0 7 NM_009947 refGene chr14 46618119 + 41387 graph_last l 16 53 actgcctctc 1250 0.0602721880100644 0 0 7 0 7 actgtcctca 1251 0.0602721880100644 0 0 7 0 7 genomic chr17 28803936 - 0 unique_long l 9 26 acttcattgg 1252 0.0602721880100644 0 0 7 0 7 NM_172498 refGene chr14 57879889 + 42254 graph_last l 18 42 agagaggagg 1253 0.0602721880100644 0 0 7 0 7 NM_023058 refGene chr17 23327731 - 57728 graph_last l 14 43 agcaaccttg 1254 0.0602721880100644 0 0 7 0 7 NM_172134 refGene chr10 80592779 - 13901 graph_last 11 52 agcacctgtc 1255 0.0602721880100644 0 0 7 0 7 NM_010250 refGene chr11 41756719 - 19197 graph_second l 5 46 agctatgcca 1256 0.0602721880100644 0 0 7 0 7 AK030527 knownGene chr3 84218074 + 86256 graph_last l 14 32 aggaaaggcg 1257 0.0602721880100644 0 0 7 0 7 NM_009124 refGene chr13 45614469 - 34511 graph_last l 7 14 aggagttaga 1258 0.0602721880100644 0 0 7 0 7 aggcgccgcc 1259 0.0602721880100644 0 0 7 0 7 agggccatcc 1260 0.0602721880100644 0 0 7 0 7 NM_011883 refGene chr3 59215037 + 85206 graph_last 0 11 ataatagtgt 1261 0.0602721880100644 0 0 7 0 7 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 1262 0.0602721880100644 0 0 7 0 7 atgaaaatga 1263 0.0602721880100644 0 0 7 0 7 genomic chr8 124756589 - 0 unique_long l 13 43 atgccgccaa 1264 0.0602721880100644 0 0 7 0 7 NM_021324 refGene chr7 4003212 + 118502 graph_last l 26 69 atgctctggg 1265 0.0602721880100644 0 0 7 0 7 genomic chr2 6461984 - 0 unique_long l 8 27 attggtgtta 1266 0.0602721880100644 0 0 7 0 7 NM_178665 refGene chr16 24600285 + 52489 graph_last 0 21 atttttcctg 1267 0.0602721880100644 0 0 7 0 7 NM_010286 refGene chrX 128922147 + 151690 graph_last 0 17 caacttagtc 1268 0.0602721880100644 0 0 7 0 7 cacaatgtga 1269 0.0602721880100644 0 0 7 0 7 NM_016862 refGene chr19 55509561 - 70624 graph_last 1 73 cacacactca 1270 0.0602721880100644 0 0 7 0 7 NM_011804 refGene chr1 169373907 + 8115 graph_last l 14 44 cacacttgaa 1271 0.0602721880100644 0 0 7 0 7 cagacaaaac 1272 0.0602721880100644 0.166666666666667 2 12 2 12 NM_009327 refGene chr5 113995054 + 106166 graph_last l 152 294 caggcttggg 1273 0.0602721880100644 0.318181818181818 7 22 8 22 NM_178774 refGene chr17 7887147 - 56858 graph_last 6 22 caggtagtca 1274 0.0602721880100644 0 0 7 0 7 NM_030206 refGene chr11 116152210 - 25235 graph_last l 14 56 caggttctcc 1275 0.0602721880100644 0 0 7 0 7 catatgtatg 1276 0.0602721880100644 0 0 7 0 7 NM_177639 refGene chr17 71233584 + 60910 graph_last l 51 90 cattactgca 1277 0.0602721880100644 0.166666666666667 2 12 2 12 NM_007757 refGene chr16 59193392 + 54564 graph_last l 5 34 cattctcccc 1278 0.0602721880100644 0 0 7 0 7 NM_028876 refGene chr5_random 7435074 + 109140 graph_last 5 27 ccaccagttt 1279 0.0602721880100644 0 0 7 0 7 NM_145130 refGene chr6 126639248 + 116885 graph_last l 14 119 ccaggaattc 1280 0.0602721880100644 4.66666666666667 14 3 16 3 cccagctctg 1281 0.0602721880100644 0 0 7 0 7 NM_146183 refGene chr7_random 1476992 - 126495 graph_last 12 78 cccggggcga 1282 0.0602721880100644 4 16 4 18 4 NM_027533 refGene chr3 105866624 + 87845 graph_last l 22 63 ccctgtgctt 1283 0.0602721880100644 0.166666666666667 2 12 2 12 NM_027629 refGene chr7 92444160 + 123455 graph_last l 8 29 ccgaaggttc 1284 0.0602721880100644 0 0 7 0 7 NM_054102 refGene chr1 154790569 + 7138 graph_last l 48 98 cctaccaata 1285 0.0602721880100644 4 16 4 18 4 NM_052994 refGene chr10 62020773 + 12772 graph_last l 12 35 cctcagcacg 1286 0.0602721880100644 0 0 7 0 7 cctgtttgct 1287 0.0602721880100644 0 0 7 0 7 ccttccacct 1288 0.0602721880100644 0 0 7 0 7 NM_010592 refGene chr8 70968350 + 130976 graph_last b 49 185 cgcggactag 1289 0.0602721880100644 0.318181818181818 7 22 8 22 NM_025594 refGene chr18 36913799 + 64022 graph_last b 22 52 cgcgtggaac 1290 0.0602721880100644 0 0 7 0 7 NM_198299 refGene chr8 107221933 - 133002 graph_last l 13 52 cggcaggagg 1291 0.0602721880100644 0 0 7 0 7 NM_010777 refGene chr18 82283307 - 66444 graph_last l 19 29 ctaaatcaaa 1292 0.0602721880100644 0 0 7 0 7 ctaggcaaat 1293 0.0602721880100644 0 0 7 0 7 AK018149 knownGene chr1 174081234 - 8364 graph_last l 11 25 ctatgggttc 1294 0.0602721880100644 0 0 7 0 7 ctcaataaat 1295 0.0602721880100644 3 24 8 26 8 NM_080595 refGene chr11 4967702 + 17352 graph_last l 25 153 ctcacaaggg 1296 0.0602721880100644 3 24 8 26 8 NM_139153 refGene chr5 22701753 - 101135 graph_last b 31 122 ctcggtgccg 1297 0.0602721880100644 0 0 7 0 7 NM_013908 refGene chr2 25771883 + 72848 graph_last l 26 134 ctgcactcct 1298 0.0602721880100644 4 16 4 18 4 NM_007584 refGene chr17 35348185 - 58980 graph_last l 11 32 ctgcagctag 1299 0.0602721880100644 0 0 7 0 7 NM_011042 refGene chr15 104593003 + 50270 graph_last 85 352 gaaatgtaag 1300 0.0602721880100644 1.92307692307692 50 26 55 26 AA073739 all_est chr19 8897935 + 67877 graph_last l 10 47 gaagccagcc 1301 0.0602721880100644 0 0 7 0 7 NM_008069 refGene chr5 71738580 + 103711 graph_last l 1 10 gacaatccct 1302 0.0602721880100644 0 0 7 0 7 NM_053271 refGene chr15 40240079 + 46498 graph_last l 4 24 gacacagatt 1303 0.0602721880100644 0 0 7 0 7 gagaacgcat 1304 0.0602721880100644 0 0 7 0 7 NM_018880 refGene chr7 97743662 - 123901 graph_last l 45 78 gagggacgga 1305 0.0602721880100644 0 0 7 0 7 genomic chr1 184526037 + 0 unique_long l 14 27 gatgtttatt 1306 0.0602721880100644 0 0 7 0 7 AK003775 all_mrna chr3 141839222 + 89737 graph_last l 20 39 gatttgaggc 1307 0.0602721880100644 0 0 7 0 7 NM_031174 refGene chr16 98603445 - 56375 graph_last l 10 55 gcacctgatg 1308 0.0602721880100644 0.166666666666667 2 12 2 12 NM_139303 refGene chr2 109472312 + 77777 graph_last 0 114 gccagaaaaa 1309 0.0602721880100644 0.166666666666667 2 12 2 12 gcccaggctc 1310 0.0602721880100644 4.66666666666667 14 3 16 3 NM_008156 refGene chr13 24878777 + 33422 graph_last l 41 74 gccgaaaact 1311 0.0602721880100644 0 0 7 0 7 gcctcagagt 1312 0.0602721880100644 0 0 7 0 7 NM_016742 refGene chr9 21705900 - 135617 graph_last l 33 75 gcctgccccg 1313 0.0602721880100644 0.166666666666667 2 12 2 12 genomic chr5 103201245 - 0 unique_both b 13 36 gcggctatct 1314 0.0602721880100644 0 0 7 0 7 NM_198703 refGene chr6 121632058 - 116605 graph_last l 7 26 gctaaagcta 1315 0.0602721880100644 0 0 7 0 7 gctccagctg 1316 0.0602721880100644 0 0 7 0 7 gctctgtgtc 1317 0.0602721880100644 0.166666666666667 2 12 2 12 gctttcttcc 1318 0.0602721880100644 0 0 7 0 7 NM_010777 refGene chr18 82283571 - 66444 graph_last l 41 92 ggcaaggtcg 1319 0.0602721880100644 0 0 7 0 7 ggggcacctg 1320 0.0602721880100644 0 0 7 0 7 AK014916 all_mrna chr9 51496996 - 137503 graph_last 0 69 ggtgtacata 1321 0.0602721880100644 0 0 7 0 7 NM_007906 refGene chr2 180989954 - 82448 graph_last 10 27 ggttctataa 1322 0.0602721880100644 0 0 7 0 7 NM_019444 refGene chr19 5654133 - 67592 graph_second l 14 28 gtgccaaggt 1323 0.0602721880100644 0 0 7 0 7 gtggctcaaa 1324 0.0602721880100644 0 0 7 0 7 gtggtgcacc 1325 0.0602721880100644 0 0 7 0 7 AK084030 knownGene chr6 40343453 + 112049 graph_last 0 8 gtgtgactgt 1326 0.0602721880100644 0 0 7 0 7 genomic chr18 26103940 + 0 unique_long l 29 63 gttaatgact 1327 0.0602721880100644 0.166666666666667 2 12 2 12 gtttagtgga 1328 0.0602721880100644 2.17647058823529 37 17 41 17 NM_197940 refGene chr11 98487014 + 23694 graph_last l 15 31 taactgaagg 1329 0.0602721880100644 0 0 7 0 7 tatgcctgtc 1330 0.0602721880100644 0 0 7 0 7 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 1331 0.0602721880100644 0.277777777777778 5 18 5 18 tccatcctct 1332 0.0602721880100644 0 0 7 0 7 X57780 knownGene chrM 5236 - 142531 graph_second 45 97 tcgaattgca 1333 0.0602721880100644 0 0 7 0 7 NM_175294 refGene chr1 134802952 + 6197 graph_last 10 47 tctcggcctg 1334 0.0602721880100644 0 0 7 0 7 tctgatccct 1335 0.0602721880100644 0 0 7 0 7 NM_023579 refGene chr14 114054037 + 44438 graph_last l 10 67 tctggcagtc 1336 0.0602721880100644 4.66666666666667 14 3 16 3 NM_031405 refGene chr5_random 31446031 + 109610 graph_last l 24 63 tcttgggcta 1337 0.0602721880100644 0 0 7 0 7 NM_029530 refGene chr2 136212325 + 79508 graph_last l 58 171 tgagttcgct 1338 0.0602721880100644 0 0 7 0 7 NM_016748 refGene chr4 119645311 - 96782 graph_last l 22 79 tgcctacagt 1339 0.0602721880100644 4 16 4 18 4 genomic chr18 364