gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_EpiCon.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count COUNT_EpiCon.TAG.count NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 1 1.78195973884190e-268 0.00429184549356223 5 1165 5 569 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 2 8.93616385488413e-108 15.6 858 55 896 27 NM_007807 refGene chrX 7985921 - 147160 graph_last 0 12115 ataatacata 3 4.29085906664324e-92 0 0 391 0 191 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 4 1.66190975294697e-66 12.5777777777778 566 45 591 22 gtggctcaca 5 1.04625187724509e-65 0.373042886317223 548 1469 572 717 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 6 3.79438886538657e-59 0.034375 11 320 12 156 tgggttgtct 7 3.45057907072672e-52 5.68468468468468 631 111 659 54 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 8 1.01816103204262e-51 0.0265151515151515 7 264 7 129 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 9 2.67084568908353e-50 0.0757575757575758 25 330 26 161 tagatatagg 10 6.79970370535428e-49 0.20508166969147 113 551 118 269 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 11 4.0836928169715e-46 0.00483091787439614 1 207 1 101 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 12 1.12284772443151e-44 0.00497512437810945 1 201 1 98 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 13 4.03874668364992e-40 0.0480349344978166 11 229 11 112 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 14 2.01464065211725e-39 0.149717514124294 53 354 55 173 agaaggaggt 15 1.74901292918118e-37 23.3333333333333 280 12 292 6 tggatcagtc 16 2.28590021360321e-37 9.15384615384615 357 39 373 19 ctagtctttg 17 3.108310449985e-32 6.4561403508772 368 57 384 28 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 18 4.84710119025819e-32 0.135036496350365 37 274 39 134 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 19 2.79924055685042e-31 0.076555023923445 16 209 17 102 gtgaaactaa 20 6.03913211195003e-31 13.25 265 20 277 10 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 21 7.28573171336015e-30 0 0 131 0 64 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 22 2.67202620475892e-29 0.0141843971631206 2 141 2 69 NM_009983 refGene chr7 134433272 - 126175 graph_last l 270 537 cctcagcctg 23 5.75017421359239e-28 0.0752688172043011 14 186 15 91 tgaccccggg 24 2.92177580275883e-27 7.38461538461539 288 39 301 19 tgtactcaat 25 1.18213487395757e-26 15.6428571428571 219 14 229 7 NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 26 2.38966174502441e-26 0.008130081300813 1 123 1 60 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 27 1.40280712776635e-25 0.114427860696517 23 201 24 98 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 28 1.73721840796826e-25 0.0888888888888889 16 180 17 88 taagggaaat 29 1.77803118053616e-25 0.152542372881356 36 236 38 115 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 30 2.57039176456353e-25 0.149779735682819 34 227 35 111 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 31 5.60234713461543e-24 0.0088495575221239 1 113 1 55 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 32 6.98325445573408e-23 12.5 200 16 209 8 gtagtggaag 33 1.09373739261424e-21 0.179372197309417 40 223 42 109 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 34 1.48805314744438e-21 13.3571428571429 187 14 195 7 caataaactg 35 1.00491812506378e-20 0.172248803827751 36 209 38 102 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 36 1.34092666266632e-20 20.125 161 8 168 4 tactcattat 37 1.67120045398559e-19 0.183574879227053 38 207 40 101 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 38 1.09405207711191e-18 0.0672268907563025 8 119 8 58 ctgaacatct 39 1.40563662217048e-18 33.75 135 4 141 2 tccctgtagt 40 1.86787262874928e-18 0.0540540540540541 6 111 6 54 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 41 1.87145158709155e-18 10.75 172 16 180 8 atagcagcac 42 2.73279447240405e-18 0.0683760683760684 8 117 8 57 gtaagcataa 43 3.1628683480397e-18 6.14285714285714 215 35 224 17 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 44 1.10799520934967e-17 0.378048780487805 155 410 162 200 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 45 1.32443934425020e-17 0.0560747663551402 6 107 6 52 gattccgtga 46 1.69436904848149e-17 6 210 35 219 17 tctaagtacg 47 2.49485400646431e-17 0.0119047619047619 1 84 1 41 gcaatctgat 48 3.65190703468908e-17 0.211822660098522 43 203 45 99 gcttttgtta 49 4.25947548382593e-17 0.05 5 100 5 49 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 50 4.25947548382593e-17 7.73913043478261 178 23 186 11 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 51 8.6614530443665e-17 11.0714285714286 155 14 162 7 NM_177266 refGene chr13 95451159 - 37146 graph_last l 94 139 taaattaaga 52 1.11459756714437e-16 0.0232558139534884 2 86 2 42 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 53 1.30941988172066e-16 0.0333333333333333 3 90 3 44 aatgacctgg 54 1.78955468964466e-16 56.5 113 2 118 1 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 55 1.86890062681532e-16 0.155844155844156 24 154 25 75 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 56 4.04521439173712e-16 16.5 132 8 138 4 aggcagacag 57 8.14813905826135e-16 3.04504504504505 338 111 353 54 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 58 8.32944562487704e-16 0.0531914893617021 5 94 5 46 taaagaggcc 59 1.15745010461668e-15 5.78787878787879 191 33 199 16 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 60 1.31165676254127e-15 0.260089686098655 58 223 61 109 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 61 1.55073100903474e-15 Inf 99 0 103 0 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 62 2.66322447726753e-15 0.0454545454545455 4 88 4 43 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 63 3.06859090946961e-15 0.317518248175182 87 274 91 134 cccttcttct 64 3.41087466307109e-15 8.61111111111111 155 18 162 9 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 65 4.88609274934967e-15 9.25 148 16 154 8 tgactgggag 66 5.86441964881128e-15 0.0555555555555556 5 90 5 44 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 67 7.08250100125771e-15 0.0465116279069767 4 86 4 42 NM_009253 refGene chr12 99777513 + 30840 graph_last 72 90 gggcctgtgg 68 1.75834356753046e-14 0 0 66 0 32 taaaaagaaa 69 1.25076536414233e-13 0.0595238095238095 5 84 5 41 gtgacctggc 70 1.26028368788173e-13 0.0147058823529412 1 68 1 33 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 71 1.26028368788173e-13 0.140495867768595 17 121 18 59 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 72 2.35342910311834e-13 0.0697674418604651 6 86 6 42 AK078240 knownGene chr2 59495398 + 74840 graph_last l 116 162 gaagaataat 73 6.33236545430852e-13 0.0714285714285714 6 84 6 41 gcctaatgta 74 6.33236545430852e-13 3.28205128205128 256 78 267 38 ggctgcagcc 75 9.5464720265202e-13 0.128440366972477 14 109 15 53 tgtgtgaggt 76 1.04601949524196e-12 Inf 81 0 85 0 cacaaacggt 77 1.78135537054627e-12 6 150 25 157 12 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 78 2.04328824373128e-12 0.159663865546218 19 119 20 58 tttttaatgt 79 2.37607829846967e-12 7.5 135 18 141 9 cagcatcacc 80 2.92627156440842e-12 13.5 108 8 113 4 gtctgctgat 81 3.23239857088526e-12 5.62962962962963 152 27 159 13 ttaatattta 82 3.57178125416783e-12 0.108695652173913 10 92 10 45 gaatgatctg 83 4.49215599650545e-12 Inf 78 0 81 0 X57780 knownGene chrM 6672 - 142531 graph_second 152 213 tggtgtaagc 84 7.04382916848415e-12 0.0853658536585366 7 82 7 40 ttggtgaagg 85 7.21794961780236e-12 0.528028933092224 292 553 305 270 tgtgccaagt 86 2.15129258133378e-11 16 96 6 100 3 NM_013603 refGene chr8 95437802 - 132464 graph_last l 72 125 ggatttattc 87 2.67553218437668e-11 0.0175438596491228 1 57 1 28 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 88 3.28436543144791e-11 Inf 73 0 76 0 tatgcctgtc 89 4.02530629508776e-11 0 0 51 0 25 tgtagtgtaa 90 4.06130952255047e-11 2.20329670329670 401 182 419 89 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 91 4.38873074328353e-11 0.0694444444444444 5 72 5 35 aatttcaaaa 92 5.37589594691764e-11 40 80 2 83 1 attctccagt 93 6.38113737276916e-11 4.30769230769231 168 39 175 19 NM_007883 refGene chr18 20972896 + 63182 graph_last 140 717 aattcgcgga 94 7.50691482107289e-11 0.0181818181818182 1 55 1 27 NM_007505 refGene chr18_random 17402584 - 67097 graph_last l 317 544 gatagataat 95 1.54351747850476e-10 0.229007633587786 30 131 31 64 gtaagcaaaa 96 2.1269721271465e-10 4.57575757575758 151 33 158 16 cctttgtgac 97 2.13033637010717e-10 0.125 11 88 12 43 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 98 2.13458802852159e-10 14.8333333333333 89 6 93 3 BE632211 all_est chrUn_random 7803125 + 142887 graph_last 0 698 ctgcggcttc 99 3.40253211138754e-10 0.240601503759398 32 133 33 65 NM_009263 refGene chr5 103680775 + 105381 graph_last l 63 74 caaacaccgt 100 3.52773903259108e-10 0 0 47 0 23 NM_023122 refGene chrX 154411688 + 152747 graph_last l 236 368 acagaattat 101 4.79606317122869e-10 0.17 17 100 18 49 NM_183187 refGene chr14 3580574 - 38877 graph_last l 92 123 ttttacctaa 102 6.33374440432082e-10 0.0196078431372549 1 51 1 25 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 103 6.42324323889908e-10 20 80 4 83 2 gattgagaat 104 1.06442941283464e-09 0 0 45 0 22 tattggctct 105 1.10730649627285e-09 0.285714285714286 44 154 46 75 ttgattgctg 106 1.180026332688e-09 0.0655737704918033 4 61 4 30 ccccagccag 107 1.32969870679579e-09 6.38888888888889 115 18 120 9 tttattaaat 108 1.80619337057578e-09 0.0204081632653061 1 49 1 24 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 109 1.86693149477758e-09 0.1 7 70 7 34 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 110 1.86693149477758e-09 Inf 63 0 66 0 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 111 2.65921151106235e-09 19.25 77 4 80 2 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 112 2.72085848625126e-09 Inf 61 0 64 0 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 113 3.00497584812261e-09 0.230769230769231 27 117 28 57 tgtgtcaacc 114 3.00497584812261e-09 0.255813953488372 33 129 34 63 tcggacgtac 115 3.02068974549243e-09 0 0 43 0 21 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 116 3.77227843799314e-09 5.8 116 20 121 10 agagtaatca 117 4.43833493062594e-09 Inf 59 0 62 0 gcaataaatg 118 4.43833493062594e-09 4.74074074074074 128 27 134 13 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 119 4.43833493062594e-09 Inf 59 0 62 0 gatgtggctg 120 4.51822961022281e-09 5.17391304347826 119 23 124 11 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 121 7.07576487902414e-09 Inf 58 0 61 0 NM_175015 refGene chr2 74302832 - 75802 graph_last 354 852 gaaatatatg 122 7.18451671747284e-09 0.31875 51 160 53 78 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 123 7.79796062131811e-09 0.0701754385964912 4 57 4 28 cctcctccag 124 9.4287811587941e-09 0.170454545454545 15 88 16 43 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 125 1.01636194044687e-08 32.5 65 2 68 1 cctttcaaac 126 1.09470305244082e-08 0.0566037735849057 3 53 3 26 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 127 1.09470305244082e-08 0.0566037735849057 3 53 3 26 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 128 1.12740569386970e-08 Inf 57 0 60 0 ctgggcccag 129 1.26701351295187e-08 0.0847457627118644 5 59 5 29 gccaagtgga 130 1.81384243626310e-08 3.36734693877551 165 49 172 24 NM_010145 refGene chr1 185082085 - 9132 graph_last l 45 101 gctttaatga 131 2.59141842128511e-08 0 0 39 0 19 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 132 2.59141842128511e-08 0 0 39 0 19 aacaatttgg 133 3.01690177585974e-08 2.85294117647059 194 68 203 33 ctaataaagc 134 3.43092367473079e-08 3.05084745762712 180 59 188 29 NM_008155 refGene chr7 27846456 - 120117 graph_second l 139 422 ggggctcagc 135 3.53275652669156e-08 0.121212121212121 8 66 8 32 NM_144935 refGene chr9 22554962 + 135730 graph_last l 102 193 ggtggagcag 136 3.53275652669156e-08 0.121212121212121 8 66 8 32 NM_008691 refGene chr14 59839646 + 42397 graph_last l 111 177 ggaaaaatag 137 3.70134530937508e-08 0.0425531914893617 2 47 2 23 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 138 3.70134530937508e-08 0.0425531914893617 2 47 2 23 ggatttggct 139 4.33368893634790e-08 2.56976744186047 221 86 231 42 NM_144915 refGene chr5 142286412 + 108317 graph_last l 263 516 tatgaattaa 140 5.18376718542731e-08 0.326666666666667 49 150 51 73 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 141 5.54218161930172e-08 0.21875 21 96 22 47 ggagggggga 142 6.49025259119818e-08 0.114754098360656 7 61 7 30 attatatttt 143 7.69587663659857e-08 0.0612244897959184 3 49 3 24 ggtgagcctg 144 8.13576209862653e-08 0.090909090909091 5 55 5 27 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 145 8.14025983996593e-08 4.52 113 25 118 12 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 146 8.29288984577947e-08 0.126984126984127 8 63 8 31 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 147 8.63975960975199e-08 3.77142857142857 132 35 138 17 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 148 1.07730129013745e-07 0.024390243902439 1 41 1 20 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 149 1.54578109003409e-07 16 64 4 67 2 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 150 1.70097334925429e-07 28.5 57 2 60 1 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 151 2.11100770256570e-07 0.244897959183673 24 98 25 48 aaaaaaaaaa 152 2.1132913566701e-07 2.10948905109489 289 137 302 67 NM_011315 refGene chr7 39596168 - 120887 graph_last l 24 24 ctgccccccg 153 2.17313789943475e-07 0 0 35 0 17 NM_007801 refGene chr9 92461916 + 140185 graph_last l 48 55 tactgggagc 154 2.17313789943475e-07 0 0 35 0 17 tgtcagtctg 155 2.17313789943475e-07 0 0 35 0 17 NM_027350 refGene chr18 64667346 + 65455 graph_last l 173 288 ccgtgtgttc 156 2.82321313859255e-07 0.151515151515152 10 66 10 32 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 157 3.40891260922524e-07 0.0816326530612245 4 49 4 24 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 158 3.67215827985312e-07 Inf 49 0 51 0 gcacaacttg 159 3.91201439080749e-07 3.22222222222222 145 45 151 22 attgtttatg 160 4.70789706338496e-07 9 72 8 75 4 gccttccaat 161 5.69021207915106e-07 3.27906976744186 141 43 147 21 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 162 6.11259278607164e-07 15 60 4 63 2 gctttgaatg 163 6.35903767533807e-07 4.9 98 20 102 10 tggctcggtc 164 6.35903767533807e-07 0.48015873015873 121 252 126 123 NM_009692 refGene chr9 47988814 + 137297 graph_last 0 1015 gctttcttac 165 6.3674369266006e-07 0 0 33 0 16 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 166 6.3674369266006e-07 0 0 33 0 16 NM_029186 refGene chr19 46557251 + 70202 graph_last 0 457 ggccgctgct 167 9.75579697011963e-07 14.75 59 4 62 2 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 168 9.75579697011963e-07 0.205128205128205 16 78 17 38 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 169 1.06776972721925e-06 7.5 75 10 78 5 caaaaataaa 170 1.09276515584205e-06 0.375 57 152 59 74 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 171 1.10896668741722e-06 26.5 53 2 55 1 gatatttttt 172 1.25425665652591e-06 0.102040816326531 5 49 5 24 tgtataaaaa 173 1.30711082080630e-06 4 108 27 113 13 NM_011492 refGene chr10 82455109 + 14048 graph_last l 231 574 gaggattccc 174 1.63499116017244e-06 0.255555555555556 23 90 24 44 tgggtgtccc 175 1.68556088766878e-06 0.117647058823529 6 51 6 25 tgaaataaac 176 1.70545975777270e-06 8.5 68 8 71 4 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 177 1.82244784038232e-06 0 0 31 0 15 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 178 1.82244784038232e-06 0 0 31 0 15 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 179 1.82244784038232e-06 26 52 2 54 1 NM_009115 refGene chr10 78400956 + 13741 graph_last l 78 132 tctgacctgc 180 1.82244784038232e-06 0 0 31 0 15 tgccatagaa 181 1.82244784038232e-06 0 0 31 0 15 NM_011123 refGene chrX 125410059 + 151562 graph_second l 76 114 tgttcttccc 182 1.82244784038232e-06 0 0 31 0 15 gctaaccacc 183 1.89892387312268e-06 0.0512820512820513 2 39 2 19 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 184 1.89892387312268e-06 0.0512820512820513 2 39 2 19 tccactgtgc 185 1.98751118879394e-06 0.260869565217391 24 92 25 45 ttccagctgc 186 1.98751118879394e-06 0.260869565217391 24 92 25 45 taataaataa 187 2.15696399425638e-06 0.313043478260870 36 115 38 56 cacacacaca 188 3.47418303128752e-06 0.073170731707317 3 41 3 20 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 189 3.90152608676261e-06 Inf 42 0 44 0 NM_153555 refGene chr1 176054753 - 8542 graph_last l 149 466 ggagcaggag 190 4.1107308377915e-06 0.208333333333333 15 72 16 35 tgtgttgtgt 191 5.1055527579719e-06 3.96 99 25 103 12 aactgcttca 192 5.31036263945816e-06 0 0 29 0 14 NM_011309 refGene chr3 93204953 - 86984 graph_last l 63 93 cccattcggg 193 5.31036263945816e-06 0 0 29 0 14 ctggaaaaac 194 5.31036263945816e-06 0 0 29 0 14 tgcttatacc 195 5.31036263945816e-06 0 0 29 0 14 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 196 5.31036263945816e-06 0.0930232558139535 4 43 4 21 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 197 6.28976250813435e-06 9.66666666666667 58 6 61 3 NM_009777 refGene chr4 135659717 - 98219 graph_last l 47 84 gatgcgtaat 198 6.28976250813435e-06 0.0303030303030303 1 33 1 16 genomic chr9 38323781 - 0 unique_long l 119 145 gttatctgat 199 6.28976250813435e-06 0.0303030303030303 1 33 1 16 tccctgtggt 200 6.28976250813435e-06 0.0303030303030303 1 33 1 16 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 201 6.63205094731173e-06 Inf 41 0 43 0 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 202 6.90116756529071e-06 23.5 47 2 49 1 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 203 6.90116756529071e-06 23.5 47 2 49 1 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 204 7.13969885119066e-06 0.111111111111111 5 45 5 22 acatcataga 205 7.764149414854e-06 3.58620689655172 104 29 109 14 NM_009900 refGene chr16 20326531 + 52187 graph_last l 109 178 agtggctaat 206 9.18438713100022e-06 0.127659574468085 6 47 6 23 tcaaacttgg 207 1.14883783945132e-05 2.71698113207547 144 53 150 26 atactgaagc 208 1.29533804570884e-05 6.7 67 10 70 5 caccaccgtt 209 1.29533804570884e-05 6.7 67 10 70 5 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 210 1.29533804570884e-05 0.097560975609756 4 41 4 20 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 211 1.32837444684824e-05 0.0571428571428571 2 35 2 17 atgtctcaaa 212 1.40000835615630e-05 1.81395348837209 312 172 326 84 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 213 1.52623086928206e-05 0 0 27 0 13 atagaggcaa 214 1.78969341541042e-05 22.5 45 2 47 1 atcctggtaa 215 1.86408273429233e-05 0.25 19 76 20 37 tcctgaaata 216 1.9862544012945e-05 0.295454545454545 26 88 27 43 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 217 2.02071507010861e-05 3.86956521739130 89 23 93 11 tgtaacagga 218 2.15370534206759e-05 3.02564102564103 118 39 123 19 ctattaaaag 219 2.21120780722737e-05 0.0810810810810811 3 37 3 18 NM_011035 refGene chr7 90025637 + 123245 graph_last l 246 410 ctcagaggtc 220 2.23823846157755e-05 0.186440677966102 11 59 12 29 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 221 2.51796289443578e-05 4.5 81 18 85 9 NM_007453 refGene chr1 164808501 - 7815 graph_last l 91 186 tacctcctag 222 2.53117198003136e-05 0.148936170212766 7 47 7 23 atttgattag 223 2.56591372512493e-05 Inf 36 0 38 0 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 224 2.84967343217333e-05 Inf 37 0 39 0 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 225 2.98612195575277e-05 22 44 2 46 1 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 226 3.01572253563114e-05 3.68 92 25 96 12 NM_030019 refGene chr15 90975517 - 49256 graph_last l 86 162 gtacagccct 227 3.1492331608043e-05 0.102564102564103 4 39 4 19 atttgatatt 228 3.41851937511198e-05 0.0606060606060606 2 33 2 16 NM_009548 refGene chr11 61020026 - 20524 graph_last l 112 164 ccaaagaacc 229 3.41851937511198e-05 0.0606060606060606 2 33 2 16 NM_013640 refGene chr8 107461637 - 133032 graph_last l 66 106 gaggtggaat 230 3.41851937511198e-05 0.0606060606060606 2 33 2 16 ttatattttc 231 3.41851937511198e-05 0.0606060606060606 2 33 2 16 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 232 3.58456648278853e-05 0.213114754098361 13 61 14 30 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 233 4.12018568876649e-05 Inf 35 0 37 0 gctgtgggtc 234 4.25275848430598e-05 0 0 25 0 12 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 235 4.25275848430598e-05 0 0 25 0 12 AK010983 knownGene chr8 71205650 - 131015 graph_last 14 20 ggtgcccgac 236 4.25275848430598e-05 0 0 25 0 12 NM_008910 refGene chr12 68703041 + 28812 graph_last l 61 75 tagaaaatca 237 4.25275848430598e-05 0 0 25 0 12 NM_016740 refGene chr3 96411854 + 87147 graph_last 36 52 tatcccacgc 238 4.25275848430598e-05 0 0 25 0 12 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 239 4.25275848430598e-05 0 0 25 0 12 ttcattataa 240 4.25275848430598e-05 3.6 90 25 94 12 NM_008740 refGene chr11 103485776 + 24251 graph_last l 35 44 taggactttg 241 4.53259052178216e-05 0.0344827586206897 1 29 1 14 gtgatattta 242 4.83225213638551e-05 0.139534883720930 6 43 6 21 aaaagaaata 243 5.02953177311491e-05 0.222222222222222 14 63 15 31 ctgcctgccc 244 5.05531820361461e-05 11.75 47 4 49 2 cagtctctca 245 5.34277985728267e-05 12 48 4 50 2 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 246 6.78009500385636e-05 Inf 34 0 35 0 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 247 7.4239231502252e-05 0.108108108108108 4 37 4 18 NM_007471 refGene chr16 86207437 + 55668 graph_last l 86 131 gcataagcaa 248 7.4239231502252e-05 0.108108108108108 4 37 4 18 NM_009768 refGene chr10 82599398 + 14067 graph_last 103 233 gggagctgtg 249 7.4239231502252e-05 0.108108108108108 4 37 4 18 tgaaaaaaaa 250 7.4239231502252e-05 7.125 57 8 59 4 NM_013556 refGene chrX_random 10203554 + 153014 graph_last l 168 266 tttcagcagt 251 7.4239231502252e-05 0.108108108108108 4 37 4 18 NM_019793 refGene chr9 58246662 - 137907 graph_last l 251 568 gagactagca 252 7.45981761798258e-05 0.210526315789474 12 57 13 28 ttcagctcga 253 7.83322492829922e-05 8.5 51 6 53 3 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 254 8.67105661241848e-05 0.064516129032258 2 31 2 15 NM_145410 refGene chr17 25392056 - 57926 graph_last 40 121 tgagatggca 255 8.67105661241848e-05 0.064516129032258 2 31 2 15 aagaatgtag 256 9.36933356472717e-05 0.128205128205128 5 39 5 19 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 257 0.000105517112617118 Inf 33 0 34 0 NM_019794 refGene chr8 86434162 - 131936 graph_last l 106 188 gttgtaaagt 258 0.000110948791070445 0.146341463414634 6 41 6 20 NM_172430 refGene chr1 85079480 - 4058 graph_last l 92 139 tgttgtacct 259 0.000110948791070445 0.146341463414634 6 41 6 20 atgtagtagt 260 0.000119241010512412 8.33333333333333 50 6 52 3 attttgtata 261 0.000119241010512412 0.0370370370370370 1 27 1 13 NM_013681 refGene chr6 116906623 + 116249 graph_last l 64 93 ccgctataac 262 0.000119241010512412 0 0 23 0 11 gaaaggagac 263 0.000119241010512412 0.0370370370370370 1 27 1 13 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 264 0.000119241010512412 0 0 23 0 11 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 265 0.000119241010512412 0.0370370370370370 1 27 1 13 NM_009305 refGene chrX 6213089 + 147019 graph_second l 33 44 gtgggttccg 266 0.000119241010512412 0 0 23 0 11 taatatttaa 267 0.000119241010512412 0.0370370370370370 1 27 1 13 NM_178612 refGene chr5 136664783 - 107940 graph_last 0 25 tggaaacttg 268 0.000119241010512412 0 0 23 0 11 tgttttaaac 269 0.000119241010512412 0 0 23 0 11 gtgttaacca 270 0.000120054156175244 11 44 4 46 2 tgagtggaca 271 0.000120054156175244 0.162790697674419 7 43 7 21 NM_020494 refGene chr12 98962385 - 30809 graph_last l 67 128 ttgtggagtt 272 0.000120054156175244 0.162790697674419 7 43 7 21 ctgtaatgat 273 0.000127572310166478 0.090909090909091 3 33 3 16 NM_025790 refGene chr13 24706246 - 33412 graph_last l 84 134 tcacctgcta 274 0.000127572310166478 0.090909090909091 3 33 3 16 NM_009668 refGene chr18 32621656 + 63661 graph_last l 84 207 ttcagggcgg 275 0.000127572310166478 0.090909090909091 3 33 3 16 cacgctcccg 276 0.000136217510815655 0.191489361702128 9 47 9 23 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 277 0.000164878104907410 Inf 32 0 33 0 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 278 0.000164878104907410 Inf 32 0 33 0 gtaaaaaaaa 279 0.000167327411657528 3.29629629629630 89 27 93 13 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 280 0.000171907641097139 0.114285714285714 4 35 4 17 NM_009871 refGene chr11 80051754 + 22184 graph_last l 45 226 ctgctatgaa 281 0.000182343803745423 10.75 43 4 45 2 ggatggggag 282 0.000198259620635486 2.81081081081081 104 37 109 18 tatgaaaatg 283 0.000207742049937226 0.204081632653061 10 49 10 24 ctgctgtacc 284 0.000211260390784312 0.135135135135135 5 37 5 18 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 285 0.000245223578344718 0.153846153846154 6 39 6 19 gcagggtggg 286 0.000259215551723462 18 36 2 38 1 NM_054072 refGene chr18 37958141 + 64094 graph_last l 118 278 tctggagaca 287 0.000259215551723462 0.254237288135593 15 59 16 29 NM_010223 refGene chr8 70802228 + 130947 graph_last l 148 335 gggtgcagcc 288 0.000268914018530002 0.170731707317073 7 41 7 20 taaatcaact 289 0.000272383594511640 Inf 30 0 31 0 gggaagtctg 290 0.000276098677160002 Inf 31 0 32 0 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 291 0.000276098677160002 Inf 31 0 32 0 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 292 0.000276098677160002 Inf 31 0 32 0 tgtaagtctg 293 0.000276098677160002 Inf 31 0 32 0 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 294 0.000284673779103615 4.25 68 16 71 8 attaagaggg 295 0.000291849735763333 0.279411764705882 19 68 20 33 acccgccggg 296 0.000303073428553175 0.3375 27 80 28 39 gaaataaatg 297 0.000303073428553175 0.215686274509804 11 51 12 25 gactgtgcca 298 0.000303073428553175 0.215686274509804 11 51 12 25 NM_023348 refGene chr16 16883044 + 51909 graph_last l 69 88 cagtagataa 299 0.000310380576205092 0.04 1 25 1 12 NM_023850 refGene chr2 93230019 + 76987 graph_last l 75 134 ctggtacgtt 300 0.000310380576205092 0.04 1 25 1 12 NM_009964 refGene chr9 52793169 + 137579 graph_last l 59 106 gcttcatctc 301 0.000310380576205092 0.04 1 25 1 12 NM_011254 refGene chr9 100844148 + 140644 graph_last l 25 41 gggaccgaaa 302 0.000310380576205092 0.04 1 25 1 12 aaggtggaag 303 0.000316271600966713 3.28 82 25 86 12 cgctggttcc 304 0.000316271600966713 3.10344827586207 90 29 94 14 agcagtcccc 305 0.000322441502323056 0 0 20 0 10 aggatctcag 306 0.000322441502323056 0 0 20 0 10 BQ175143 all_est chr4 56709743 - 93445 graph_last l 30 56 atttgaaaat 307 0.000322441502323056 0 0 20 0 10 NM_009696 refGene chr7 16663365 - 119339 graph_last l 36 51 ctgggccaga 308 0.000322441502323056 0 0 20 0 10 AI788965 all_est chr13 57790952 - 35315 graph_last l 37 44 gcgttttaat 309 0.000322441502323056 0 0 20 0 10 ggatagccaa 310 0.000322441502323056 0 0 20 0 10 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 311 0.000322441502323056 0 0 20 0 10 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 312 0.000322441502323056 0 0 20 0 10 aataaactgc 313 0.000338739186264142 6.375 51 8 53 4 ggcttcggtc 314 0.000351468122688805 1.53383458646617 408 266 426 130 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 315 0.000366096815368166 4.5 63 14 66 7 agactatgca 316 0.000387125258440152 0.121212121212121 4 33 4 16 NM_174998 refGene chr4 122151861 + 96906 graph_last l 199 320 ctgcttctaa 317 0.000387125258440152 0.121212121212121 4 33 4 16 tcctgggatg 318 0.000387125258440152 0.121212121212121 4 33 4 16 NM_134118 refGene chr8 84313000 - 131727 graph_last l 128 671 gctctccagc 319 0.000392701357913689 7.66666666666667 46 6 48 3 gagacagtga 320 0.000402839208175363 Inf 29 0 30 0 gagttctctg 321 0.000428172815425766 0.226415094339623 12 53 13 26 AK005167 knownGene chr7 24244951 + 119924 graph_last l 55 397 actcctgtcc 322 0.000429306395527555 10.25 41 4 43 2 aggaaggcgg 323 0.000496604255552441 2.53333333333333 114 45 119 22 NM_009712 refGene chr13 92186794 + 36929 graph_last l 44 86 attgttccag 324 0.000521979746564423 0.0740740740740741 2 27 2 13 tgtaaaataa 325 0.000521979746564423 0.0740740740740741 2 27 2 13 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 326 0.000555485845245351 0.179487179487179 7 39 7 19 genomic chr16 44061816 - 0 unique_long l 142 249 tctacacagt 327 0.000555485845245351 0.179487179487179 7 39 7 19 cttgcaagtg 328 0.000568131168221664 0.377777777777778 34 90 36 44 tgcccagtgc 329 0.000576031287974952 0.195121951219512 8 41 8 20 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 330 0.000593845497142615 7.33333333333333 44 6 46 3 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 331 0.000602870448009801 0.245283018867925 13 53 14 26 tttttggtgt 332 0.000602870448009801 17 34 2 36 1 gtacatactg 333 0.000619002138726045 0.303030303030303 20 66 21 32 ctacgttctc 334 0.000626321401295881 5.4 54 10 56 5 tcaataaagc 335 0.000626321401295881 5.4 54 10 56 5 catacctgaa 336 0.00062774854823685 9.75 39 4 41 2 ggagagggta 337 0.00062774854823685 9.75 39 4 41 2 aagctcagtt 338 0.000645901781767381 Inf 28 0 29 0 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 339 0.000645901781767381 Inf 28 0 29 0 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 340 0.000645901781767381 Inf 28 0 29 0 tgggactcac 341 0.000685452696009999 0.222222222222222 10 45 10 22 NM_009166 refGene chr19 40425656 - 69723 graph_last l 97 148 ttgagttact 342 0.000685452696009999 0.222222222222222 10 45 10 22 AK077438 knownGene chr4 125527683 + 97215 graph_last l 66 90 ttgaatgtga 343 0.000715251784767409 0.103448275862069 3 29 3 14 NM_023051 refGene chr4 147761803 + 99301 graph_last l 204 510 tcctgtcccc 344 0.000732145312812188 0.235294117647059 12 51 13 25 genomic chr11 119091671 - 0 unique_long l 46 102 aattgttaag 345 0.000780577180469892 0.0434782608695652 1 23 1 11 NM_029362 refGene chr2 155319396 + 80568 graph_last l 44 72 gtctgtgccc 346 0.000780577180469892 0.0434782608695652 1 23 1 11 NM_175628 refGene chr6 123372401 + 116753 graph_last l 23 30 gtgcagcaag 347 0.000780577180469892 0.0434782608695652 1 23 1 11 tagttcggcc 348 0.000780577180469892 0.0434782608695652 1 23 1 11 NM_146089 refGene chr18 77804808 + 66243 graph_last 0 28 tctttatttc 349 0.000780577180469892 0.0434782608695652 1 23 1 11 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 350 0.000859088125569331 2.46666666666667 111 45 116 22 aaaaaaataa 351 0.000865302470650492 0.129032258064516 4 31 4 15 accaatgaac 352 0.000865302470650492 0 0 18 0 9 NM_175434 refGene chr8 128236805 + 134473 graph_last l 31 43 acctgaactt 353 0.000865302470650492 0 0 18 0 9 NM_011246 refGene chr2 117550768 - 78248 graph_last l 87 114 aggttttgtt 354 0.000865302470650492 0 0 18 0 9 genomic chr11 4634870 - 0 unique_long l 17 37 atactatttt 355 0.000865302470650492 0 0 18 0 9 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 356 0.000865302470650492 0 0 18 0 9 X57780 knownGene chrM 119 + 142531 graph_second l 3651 6052 caaacctcca 357 0.000865302470650492 0 0 18 0 9 NM_026178 refGene chr11 89862053 - 22988 graph_last l 27 36 catatacagc 358 0.000865302470650492 0 0 18 0 9 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 359 0.000865302470650492 7.16666666666667 43 6 45 3 NM_026797 refGene chr2 165107004 + 81283 graph_last l 50 85 ccgcagggtg 360 0.000865302470650492 0 0 18 0 9 NM_008614 refGene chr9 122556298 + 142162 graph_last b 88 767 cgcagcgttg 361 0.000865302470650492 0 0 18 0 9 NM_008156 refGene chr13 24878777 + 33422 graph_last l 41 74 gccgaaaact 362 0.000865302470650492 0 0 18 0 9 NM_024439 refGene chr7 58524814 + 121731 graph_last l 35 65 gcttttatgg 363 0.000865302470650492 0 0 18 0 9 NM_021281 refGene chr3 98250636 + 87330 graph_last l 12 13 gtgttcttgt 364 0.000865302470650492 0 0 18 0 9 NM_033264 refGene chr9 114792119 - 141710 graph_last l 116 153 ttacttgatc 365 0.000865302470650492 0 0 18 0 9 ctgcatcgtt 366 0.000882403200357256 16.5 33 2 34 1 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 367 0.000882403200357256 16.5 33 2 34 1 tgtggaaaga 368 0.00090503473638776 0.264150943396226 14 53 15 26 ttgggccaga 369 0.000919789676752771 0.333333333333333 24 72 25 35 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 370 0.000922582446136107 0.351351351351351 26 74 27 36 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 371 0.00093006626908451 17 34 2 35 1 NM_025567 refGene chr15 77978170 + 48141 graph_last l 205 434 gccttctcag 372 0.00093006626908451 0.323529411764706 22 68 23 33 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 373 0.00097090952102285 0.151515151515152 5 33 5 16 NM_008048 refGene chr5 77726702 - 104094 graph_last l 45 73 tagctttaaa 374 0.00097090952102285 0.151515151515152 5 33 5 16 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 375 0.000993617826131073 Inf 26 0 27 0 tctacaagaa 376 0.00102184715658773 2.86206896551724 83 29 87 14 NM_028659 refGene chr3 93044981 - 86956 graph_last 239 561 gcctcctccc 377 0.00102627637061530 0.431372549019608 44 102 46 50 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 378 0.00102627637061530 4.14285714285714 58 14 61 7 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 379 0.00105075563708731 5.875 47 8 49 4 tcccccacac 380 0.00105075563708731 0.171428571428571 6 35 6 17 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 381 0.00110129470773335 0.189189189189189 7 37 7 18 cttttttatt 382 0.00110129470773335 0.189189189189189 7 37 7 18 gaaataatgt 383 0.00121131970078357 0.08 2 25 2 12 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 384 0.00122742463153432 0.244897959183673 12 49 13 24 NM_021519 refGene chr2 25828459 + 72856 graph_last l 161 295 gtcaaacgga 385 0.00122742463153432 0.244897959183673 12 49 13 24 ttagatgttt 386 0.00124469712753002 0.232558139534884 10 43 10 21 NM_153457 refGene chr12 68119328 - 28767 graph_last l 138 580 agtgggggtg 387 0.00127803302561024 7 42 6 44 3 atagacgcaa 388 0.00137062340898074 4.5 54 12 56 6 tgacaatttt 389 0.00139706540478102 9 36 4 38 2 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 390 0.00141470038066375 4.58333333333333 55 12 57 6 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 391 0.00156466012180383 Inf 25 0 26 0 gtcagttaaa 392 0.00156466012180383 Inf 25 0 26 0 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 393 0.00156466012180383 Inf 25 0 26 0 caaaacaggc 394 0.00161254267032464 0.111111111111111 3 27 3 13 gcctagaact 395 0.00161254267032464 0.111111111111111 3 27 3 13 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 396 0.00161254267032464 5.75 46 8 48 4 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 397 0.00190085902256763 6.66666666666667 40 6 42 3 ccttgctcaa 398 0.00193151893031094 0.478632478632479 56 117 58 57 cagttctggc 399 0.00194475223432887 0.137931034482759 4 29 4 14 NM_133867 refGene chr3 111037301 + 88249 graph_last 71 181 tgccgttttg 400 0.00194475223432887 0.137931034482759 4 29 4 14 NM_183308 refGene chr6 4989644 - 110065 graph_last l 34 57 aaagctctat 401 0.00194703018603811 0.05 1 20 1 10 NM_007757 refGene chr16 59195056 + 54564 graph_last l 44 71 tcttacatag 402 0.00194703018603811 0.05 1 20 1 10 NM_008671 refGene chrX 93088958 - 150492 graph_last l 63 109 tgagttacag 403 0.00194703018603811 0.05 1 20 1 10 tttctcaata 404 0.00194703018603811 0.05 1 20 1 10 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 405 0.00213994770289315 8.75 35 4 37 2 cctggcactg 406 0.00214790037916156 0.161290322580645 5 31 5 15 gacaaataaa 407 0.00214790037916156 0.161290322580645 5 31 5 15 taaaccactg 408 0.00214790037916156 0.161290322580645 5 31 5 15 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 409 0.00216551950594933 15.5 31 2 32 1 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 410 0.0023013353567002 0.404761904761905 34 84 35 41 BC024662 knownGene chr8 85108232 - 131801 graph_last l 36 62 acgtggtaat 411 0.00233288422088366 0 0 16 0 8 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 412 0.00233288422088366 0 0 16 0 8 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 413 0.00233288422088366 0 0 16 0 8 NM_010777 refGene chr18 82283312 + 66444 graph_second l 91 102 ccttctgtag 414 0.00233288422088366 0 0 16 0 8 ctcggtgtct 415 0.00233288422088366 0 0 16 0 8 NM_197988 refGene chr8 122517532 + 133997 graph_last l 13 19 ctggaagctg 416 0.00233288422088366 0 0 16 0 8 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 417 0.00233288422088366 0 0 16 0 8 NM_144907 refGene chr4 131230285 + 97732 graph_last l 17 28 gggggaagtt 418 0.00233288422088366 0 0 16 0 8 ggtggctcac 419 0.00233288422088366 0 0 16 0 8 NM_019564 refGene chr7 123066718 + 125453 graph_last l 32 92 gtcttgggcg 420 0.00233288422088366 0 0 16 0 8 NM_009382 refGene chr9 45815819 - 137031 graph_last l 40 55 gtgatgggac 421 0.00233288422088366 0 0 16 0 8 NM_013511 refGene chr10 26407712 + 11087 graph_last l 36 50 taaaactaac 422 0.00233288422088366 0 0 16 0 8 tagccgtaga 423 0.00233288422088366 0 0 16 0 8 NM_008530 refGene chr15 76746261 - 48047 graph_last l 39 46 tatcctgaat 424 0.00233288422088366 0 0 16 0 8 tgccatagac 425 0.00233288422088366 0 0 16 0 8 NM_009725 refGene chr3 109064595 - 88118 graph_last 238 466 tggtgaagag 426 0.0024524627265914 0.315789473684211 18 57 19 28 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 427 0.00246324402238027 Inf 24 0 25 0 tctgccctct 428 0.00246324402238027 0.349206349206349 22 63 23 31 NM_011273 refGene chr1 158735049 - 7403 graph_last l 10 76 tggagtttcc 429 0.00246324402238027 Inf 24 0 25 0 taaaagaaaa 430 0.00252570985920329 0.50381679389313 66 131 69 64 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 431 0.00276432526840968 6.5 39 6 41 3 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 432 0.00278977457891192 2.92 73 25 76 12 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 433 0.00288661434707161 0.0869565217391304 2 23 2 11 taatgtagac 434 0.00288661434707161 0.0869565217391304 2 23 2 11 tctgctaaag 435 0.00288661434707161 0.0869565217391304 2 23 2 11 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 436 0.00298036840585465 3.625 58 16 61 8 ccctgggttc 437 0.00300391459245882 3.44444444444444 62 18 65 9 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 438 0.00300391459245882 3.44444444444444 62 18 65 9 genomic chr10 132190374 + 0 unique_long l 78 246 gagtggattc 439 0.00317082901002331 0.216216216216216 8 37 8 18 gaagtcggaa 440 0.00317420446193788 14.5 29 2 30 1 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 441 0.00317420446193788 14.5 29 2 30 1 NM_013540 refGene chr3 82522444 - 86190 graph_last l 43 155 tgtactatgt 442 0.00317420446193788 14.5 29 2 30 1 ctctcttcta 443 0.00321126076570414 8.5 34 4 36 2 NM_011170 refGene chr2 132080703 - 79291 graph_last l 47 76 cagattcaaa 444 0.00369679154153809 0.12 3 25 3 12 NM_009133 refGene chr2 181155372 - 82469 graph_last l 106 514 aacgggaggt 445 0.0038464203755063 4.7 47 10 49 5 gtgtatcttt 446 0.0038464203755063 4.7 47 10 49 5 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 447 0.00392352791306457 Inf 22 0 23 0 gcacaggaga 448 0.00392352791306457 Inf 22 0 23 0 gcctatccaa 449 0.00392352791306457 0.285714285714286 14 49 15 24 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 450 0.00392352791306457 Inf 22 0 23 0 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 451 0.00392352791306457 Inf 22 0 23 0 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 452 0.00418206731278062 Inf 23 0 24 0 AK084022 knownGene chr11 60723328 - 20505 graph_last l 38 149 tgaacctgag 453 0.00418206731278062 Inf 23 0 24 0 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 454 0.00419911534314033 0.367647058823529 25 68 26 33 gtggctaaca 455 0.00421296299371771 0.148148148148148 4 27 4 13 aatggatgaa 456 0.00444992375310680 0.256410256410256 10 39 10 19 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 457 0.00444992375310680 0.256410256410256 10 39 10 19 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 458 0.00444992375310680 0.256410256410256 10 39 10 19 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 459 0.00450028078577239 1.93055555555556 139 72 145 35 NM_009242 refGene chr11 55019713 - 20083 graph_last l 148 698 caaactctca 460 0.00450244475320543 0.172413793103448 5 29 5 14 gcaagagaga 461 0.00450244475320543 0.172413793103448 5 29 5 14 ggcaggagag 462 0.00450244475320543 0.172413793103448 5 29 5 14 NM_009882 refGene chr17 79630406 + 61357 graph_last 55 133 tgagagtaca 463 0.00450244475320543 0.172413793103448 5 29 5 14 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 464 0.00456165162095724 0.255813953488372 11 43 12 21 aaataaatgt 465 0.0046249823008779 0.193548387096774 6 31 6 15 NM_145516 refGene chr1 35567557 + 1446 graph_last l 104 173 caccctctca 466 0.0046249823008779 0.193548387096774 6 31 6 15 gcaggacatt 467 0.0046249823008779 0.193548387096774 6 31 6 15 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 468 0.00467549884696743 8.25 33 4 34 2 NM_008691 refGene chr14 59840834 + 42397 graph_last l 80 163 agtgaatgca 469 0.00476516736400159 0.0555555555555556 1 18 1 9 NM_022029 refGene chr9 38324027 + 136533 graph_last l 92 152 ctgggcgcgt 470 0.00476516736400159 0.0555555555555556 1 18 1 9 NM_016850 refGene chr7 133218562 + 126057 graph_last l 13 17 gacctgggtc 471 0.00476516736400159 0.0555555555555556 1 18 1 9 NM_013509 refGene chr6 126683942 + 116901 graph_last l 22 79 gcgcagggga 472 0.00476516736400159 0.0555555555555556 1 18 1 9 ttttttcaca 473 0.00476516736400159 0.0555555555555556 1 18 1 9 NM_080595 refGene chr11 4967702 + 17352 graph_last l 25 153 ctcacaaggg 474 0.00483357527214893 14 28 2 29 1 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 475 0.00483357527214893 14 28 2 29 1 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 476 0.00483357527214893 14 28 2 29 1 aggtcgggtg 477 0.00491935763433605 2.34146341463415 96 41 100 20 tcttaatgaa 478 0.0052726155856285 2.24444444444444 101 45 105 22 cgggagatgc 479 0.00567306657089749 0.581395348837209 100 172 104 84 atggctcaca 480 0.00571906301360518 0.228571428571429 8 35 8 17 NM_009327 refGene chr5 113995054 + 106166 graph_last l 152 294 caggcttggg 481 0.00572965134970854 0.268292682926829 11 41 11 20 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 482 0.0059540381658846 6 36 6 38 3 NM_010398 refGene chr17 34913504 + 58954 graph_last l 34 154 ccagaggact 483 0.00607646210102979 Inf 21 0 22 0 ccaggagagg 484 0.00607646210102979 Inf 21 0 22 0 NM_011486 refGene chr11 100552220 - 23906 graph_last 2 202 gcatcctgtt 485 0.00607646210102979 Inf 21 0 22 0 NM_009777 refGene chr4 135677212 - 98219 graph_last l 15 24 accctagtat 486 0.00609097166813274 0 0 14 0 7 NM_145445 refGene chr12 81218230 + 29834 graph_last l 14 28 actactttgc 487 0.00609097166813274 0 0 14 0 7 atactgacat 488 0.00609097166813274 0 0 14 0 7 NM_007510 refGene chr6 122495152 + 116693 graph_last l 39 76 atctgaaata 489 0.00609097166813274 0 0 14 0 7 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 490 0.00609097166813274 0 0 14 0 7 ccattggttt 491 0.00609097166813274 0 0 14 0 7 NM_010239 refGene chr19 9868367 + 67950 graph_last l 64 76 ccgagaaact 492 0.00609097166813274 0 0 14 0 7 cgcaaacatt 493 0.00609097166813274 0 0 14 0 7 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 494 0.00609097166813274 0 0 14 0 7 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 495 0.00609097166813274 0 0 14 0 7 NM_183173 refGene chr11 53101835 - 19914 graph_last l 39 56 gagtatggct 496 0.00609097166813274 0 0 14 0 7 NM_010777 refGene chr18 82282177 + 66444 graph_last l 85 112 gcgagacgct 497 0.00609097166813274 0 0 14 0 7 gctgccctcc 498 0.00609097166813274 0 0 14 0 7 genomic chr10 58581670 - 0 unique_long l 18 42 gcttgcctcc 499 0.00609097166813274 0 0 14 0 7 ggcaagcccc 500 0.00609097166813274 1.71171171171171 190 111 198 54 NM_026697 refGene chr2 35455014 - 73680 graph_last l 24 34 gtaaatctag 501 0.00609097166813274 0 0 14 0 7 NM_026430 refGene chr1 44635595 - 1941 graph_last l 20 33 gttaaatatg 502 0.00609097166813274 0 0 14 0 7 NM_183118 refGene chr8 124755075 - 134172 graph_last l 34 57 taaaatcaag 503 0.00609097166813274 0 0 14 0 7 NM_015744 refGene chr15 56418304 - 47061 graph_last l 33 39 tagaagcttc 504 0.00609097166813274 0 0 14 0 7 tcacaaagat 505 0.00609097166813274 0 0 14 0 7 tctctgaatg 506 0.00609097166813274 0 0 14 0 7 tgcctgggct 507 0.00609097166813274 0 0 14 0 7 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 508 0.00609097166813274 0 0 14 0 7 NM_172859 refGene chr2 144543036 - 79873 graph_last l 56 93 tgtgttataa 509 0.00609097166813274 0 0 14 0 7 NM_021281 refGene chr3 98256898 - 87330 graph_last l 13 16 ttacaaatgg 510 0.00609097166813274 0 0 14 0 7 genomic chr7 3354046 - 0 unique_long l 27 40 ttctgtataa 511 0.00609097166813274 0 0 14 0 7 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 512 0.00614625579510129 0.297872340425532 14 47 15 23 NM_198412 refGene chr4 100502464 + 95436 graph_last l 62 109 aaacaaaaca 513 0.0064966665757728 0.1 2 20 2 10 agaactttcc 514 0.0064966665757728 0.1 2 20 2 10 ccagcttcag 515 0.0064966665757728 0.1 2 20 2 10 gtatttgcaa 516 0.0064966665757728 0.1 2 20 2 10 NM_007794 refGene chr8 107045121 - 132995 graph_last l 66 88 tccctcctta 517 0.0064966665757728 0.1 2 20 2 10 caaaaaaaaa 518 0.00677276390457195 8 32 4 33 2 tatctgtcta 519 0.00677276390457195 8 32 4 33 2 NM_173396 refGene chr2 157499191 + 80813 graph_last l 110 176 gtacaataca 520 0.00679363686834939 0.212121212121212 7 33 7 16 gctttgactg 521 0.00721237242374428 13 26 2 27 1 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 522 0.00721237242374428 13 26 2 27 1 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 523 0.00721237242374428 13 26 2 27 1 gtttagtgga 524 0.00732038809279343 4.4 44 10 46 5 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 525 0.0074250006176764 13.5 27 2 28 1 ttacttgttt 526 0.00760215894666156 0.268292682926829 11 41 12 20 NM_013879 refGene chr5 114215618 + 106194 graph_last l 95 218 tgtgccccag 527 0.0078934845697066 0.130434782608696 3 23 3 11 NM_013782 refGene chr7 133315232 + 126067 graph_last l 35 97 gctcccttga 528 0.00879198230864369 0.16 4 25 4 12 gtgactcaca 529 0.00879198230864369 0.16 4 25 4 12 tacaggcagt 530 0.00889801644320475 0.257142857142857 9 35 9 17 NM_026170 refGene chr17 26263613 + 58032 graph_last l 54 99 gaagagacgc 531 0.00915430968347512 0.185185185185185 5 27 5 13 NM_029518 refGene chr18 35005778 + 63799 graph_last l 86 159 gggtcccctt 532 0.00915430968347512 0.185185185185185 5 27 5 13 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 533 0.00915430968347512 0.185185185185185 5 27 5 13 NM_023130 refGene chr2 155492314 + 80608 graph_last l 18 107 cattcttcct 534 0.00953899778662767 Inf 20 0 21 0 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 535 0.00953899778662767 Inf 20 0 21 0 tacctattgt 536 0.00953899778662767 Inf 20 0 21 0 NM_018871 refGene chr5 134736729 - 107744 graph_last l 168 546 aatgtgagtc 537 0.0095443263338858 2.73913043478261 63 23 66 11 tcgtgattgt 538 0.00963753887350986 4.75 38 8 40 4 ggagaacctt 539 0.0102007922303674 0.242424242424242 8 33 8 16 NM_029810 refGene chr19 47024121 + 70244 graph_last l 46 157 acgcatctgt 540 0.0102024467572348 7.5 30 4 31 2 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 541 0.0102024467572348 7.5 30 4 31 2 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 542 0.0102024467572348 7.5 30 4 31 2 tagtcaggga 543 0.0103683484600196 0.465116279069767 40 86 42 42 gtcaaaaaaa 544 0.0106565869175242 7.75 31 4 32 2 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 545 0.0107449485084748 3.3125 53 16 55 8 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 546 0.0110684715827739 12.5 25 2 26 1 NM_009721 refGene chr1 167487773 - 7965 graph_last l 43 108 acagcccacc 547 0.0114476294085773 0.0625 1 16 1 8 NM_010595 refGene chr6 128564638 - 117035 graph_last l 78 117 atctgttcat 548 0.0114476294085773 0.0625 1 16 1 8 genomic chr6 131143837 + 0 unique_long l 23 29 attgggggag 549 0.0114476294085773 0.0625 1 16 1 8 gaaagattgt 550 0.0114476294085773 0.0625 1 16 1 8 NM_011106 refGene chr2 164340007 + 81226 graph_last l 57 97 gagcctcaca 551 0.0114476294085773 0.0625 1 16 1 8 NM_009133 refGene chr2 181162232 - 82469 graph_last 36 53 gccagcaccg 552 0.0114476294085773 0.0625 1 16 1 8 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 553 0.0114476294085773 0.0625 1 16 1 8 NM_026524 refGene chrX 9266852 + 147223 graph_last l 45 103 ggagggcagc 554 0.0114476294085773 0.0625 1 16 1 8 NM_009155 refGene chr15 3359640 - 44888 graph_last l 96 194 tatctgtgca 555 0.0114476294085773 0.0625 1 16 1 8 NM_028170 refGene chr17_random 123078 - 62315 graph_last 46 69 tgctgttaac 556 0.0114476294085773 0.0625 1 16 1 8 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 557 0.0114476294085773 0.0625 1 16 1 8 NM_183028 refGene chr1 7204527 + 187 graph_last l 18 25 ttattctgtc 558 0.0114476294085773 0.0625 1 16 1 8 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 559 0.0114476294085773 0.0625 1 16 1 8 attctgaaca 560 0.0121361472579955 0.225806451612903 7 31 7 15 NM_016743 refGene chr15 97285350 + 49595 graph_last l 127 271 gttacgtaac 561 0.0127681687986979 0.346938775510204 17 49 18 24 gcagttgtcc 562 0.0134607671029343 0.282051282051282 11 39 12 19 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 563 0.0134607671029343 0.282051282051282 11 39 12 19 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 564 0.0139006773686163 4.625 37 8 39 4 NM_198894 refGene chr11 75988055 - 21730 graph_last l 94 280 tgagagggaa 565 0.0139006773686163 4.625 37 8 39 4 tgtgaatgat 566 0.0139006773686163 4.625 37 8 39 4 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 567 0.0147923157725967 Inf 18 0 19 0 NM_019802 refGene chr6 73475733 - 113867 graph_last l 14 117 actgcttgcc 568 0.0147923157725967 Inf 18 0 19 0 genomic chr10 55089196 + 0 unique_long l 21 111 gactggctgt 569 0.0147923157725967 Inf 18 0 19 0 NM_010496 refGene chr12 19542551 + 26650 graph_last l 4 68 gtgggaatag 570 0.0147923157725967 Inf 18 0 19 0 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 571 0.0147923157725967 Inf 18 0 19 0 aagtaaagcg 572 0.0151916913244719 7.25 29 4 30 2 tagttccgac 573 0.0151916913244719 7.25 29 4 30 2 NM_010487 refGene chr9 22694824 - 135759 graph_last l 39 62 aggagaaaag 574 0.0153801192441901 0.111111111111111 2 18 2 9 NM_011370 refGene chr7 48844066 - 121276 graph_last l 41 76 ccgaatattc 575 0.0153801192441901 0.111111111111111 2 18 2 9 NM_175427 refGene chr2 27379465 - 72982 graph_last l 61 108 ggacttgcca 576 0.0153801192441901 0.111111111111111 2 18 2 9 NM_007839 refGene chr5 51468944 + 102762 graph_last l 27 99 atcgttgtaa 577 0.0159576331726952 Inf 19 0 20 0 NM_174997 refGene chr1 35501828 - 1439 graph_last l 16 91 gaacttatgt 578 0.0159576331726952 Inf 19 0 20 0 NM_021526 refGene chr2 62189433 + 75066 graph_last 19 96 tggatgtgct 579 0.0159576331726952 Inf 19 0 20 0 NM_011373 refGene chr2 32892643 + 73458 graph_last l 31 50 aagctgtttc 580 0.0159642978337815 0 0 12 0 6 NM_011177 refGene chr7 36507449 + 120606 graph_last l 11 18 agacatccag 581 0.0159642978337815 0 0 12 0 6 agagcgaagt 582 0.0159642978337815 2.01960784313725 103 51 107 25 BC047418 knownGene chrX 91466080 + 150344 graph_last 0 3086 aggacaaata 583 0.0159642978337815 0 0 12 0 6 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 584 0.0159642978337815 0 0 12 0 6 NM_177762 refGene chr6 88428087 + 114661 graph_last l 15 22 caaacaatct 585 0.0159642978337815 0 0 12 0 6 NM_011804 refGene chr1 169373907 + 8115 graph_last l 14 44 cacacttgaa 586 0.0159642978337815 0 0 12 0 6 NM_009976 refGene chr2 149268267 - 80122 graph_last l 47 71 cagactgttc 587 0.0159642978337815 0 0 12 0 6 NM_030228 refGene chr11 4958252 + 17342 graph_last l 24 41 cctaaccagg 588 0.0159642978337815 0 0 12 0 6 NM_009983 refGene chr7 134433277 + 126175 graph_last l 12 15 ccttcccagg 589 0.0159642978337815 0 0 12 0 6 NM_008630 refGene chr8 95457197 - 132465 graph_second l 16 32 ctttatagaa 590 0.0159642978337815 0 0 12 0 6 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 591 0.0159642978337815 0.381818181818182 21 55 22 27 NM_133900 refGene chr5 128810363 - 107260 graph_last l 12 22 gagaatttta 592 0.0159642978337815 0 0 12 0 6 NM_018880 refGene chr7 97743662 - 123901 graph_last l 45 78 gagggacgga 593 0.0159642978337815 0 0 12 0 6 NM_133891 refGene chr4 53301980 + 93307 graph_last l 44 63 gatcatagct 594 0.0159642978337815 0 0 12 0 6 gatttttttt 595 0.0159642978337815 0 0 12 0 6 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 596 0.0159642978337815 0 0 12 0 6 BC052916 knownGene chr13 93885220 - 37038 graph_last l 13 19 ggaaggctcc 597 0.0159642978337815 0 0 12 0 6 NM_011693 refGene chr3 119447749 - 88599 graph_last l 17 20 gtactgtacg 598 0.0159642978337815 0 0 12 0 6 NM_133886 refGene chr4 125657377 - 97254 graph_last l 6 20 gtttccctgt 599 0.0159642978337815 0 0 12 0 6 NM_175706 refGene chr2 22109787 + 72602 graph_last l 54 76 taaataacta 600 0.0159642978337815 0 0 12 0 6 NM_172645 refGene chr1 165384795 - 7830 graph_last 0 11 taagagggaa 601 0.0159642978337815 0 0 12 0 6 taataaaatt 602 0.0159642978337815 0 0 12 0 6 tacatacata 603 0.0159642978337815 0 0 12 0 6 NM_008630 refGene chr8 95457138 + 132465 graph_last l 8 13 tagaagccta 604 0.0159642978337815 0 0 12 0 6 NM_009415 refGene chr6 126739303 + 116907 graph_last 13 14 tataccgaat 605 0.0159642978337815 0 0 12 0 6 NM_016769 refGene chr9 66020854 - 138535 graph_last l 25 33 tatttatagt 606 0.0159642978337815 0 0 12 0 6 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 607 0.0159642978337815 0.272727272727273 9 33 9 16 NM_011123 refGene chrX 125411158 - 151562 graph_last l 49 76 tgagattttt 608 0.0159642978337815 0 0 12 0 6 tgctcacagc 609 0.0159642978337815 0 0 12 0 6 NM_026061 refGene chr19 44652030 - 70031 graph_second 6 6 tgtaaacatc 610 0.0159642978337815 0 0 12 0 6 tgtatacaca 611 0.0159642978337815 0 0 12 0 6 NM_008246 refGene chr3 119963987 - 88634 graph_last l 21 35 tttcaagctt 612 0.0159642978337815 0 0 12 0 6 agggaaaaaa 613 0.0162699629307940 12 24 2 25 1 NM_025482 refGene chr2 181400858 + 82485 graph_last l 34 183 cctctgtttg 614 0.0162699629307940 12 24 2 25 1 aagaaaatag 615 0.0165651521932784 2.60869565217391 60 23 63 11 aaggagttac 616 0.0167003827266998 0.15 3 20 3 10 gagtcactct 617 0.0167003827266998 0.15 3 20 3 10 NM_019406 refGene chr2 31298595 - 73309 graph_last l 58 96 taattaaatg 618 0.0167003827266998 0.15 3 20 3 10 tacacacctg 619 0.0167003827266998 0.15 3 20 3 10 NM_153152 refGene chr17 56592523 - 60255 graph_last l 61 136 tcagccttgt 620 0.0167003827266998 0.15 3 20 3 10 ttttcaaaaa 621 0.0167003827266998 0.15 3 20 3 10 NM_031877 refGene chr10 42467131 + 11865 graph_last l 103 193 tgaaatactc 622 0.017123401148954 0.372549019607843 19 51 20 25 cattttacat 623 0.0177398575064886 0.258064516129032 8 31 8 15 gcccccaatg 624 0.0177398575064886 0.173913043478261 4 23 4 11 NM_019668 refGene chrX 28210668 + 147890 graph_last l 29 55 taaaaactgt 625 0.0177398575064886 0.173913043478261 4 23 4 11 aaataaagat 626 0.0178576874719416 0.2 5 25 5 12 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 627 0.0178576874719416 0.2 5 25 5 12 gtggttcaca 628 0.0178576874719416 0.2 5 25 5 12 taaaaaaaaa 629 0.0183444722810754 2.15384615384615 84 39 88 19 gaaatttaaa 630 0.0202244937794624 3.58333333333333 43 12 45 6 gctccctctg 631 0.0202244937794624 3.58333333333333 43 12 45 6 NM_019410 refGene chr3 59231425 - 85210 graph_last l 161 357 aagcgtgcag 632 0.020309267424047 0.317073170731707 13 41 14 20 atgataatgg 633 0.0210233829093084 0.241379310344828 7 29 7 14 taaattaaat 634 0.0210233829093084 0.241379310344828 7 29 7 14 ttttatgttt 635 0.0210233829093084 1.78378378378378 132 74 138 36 agaggtgtag 636 0.0211030255698310 0.459459459459459 34 74 36 36 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 637 0.0220446621327809 Inf 17 0 18 0 ctttctcaaa 638 0.0220446621327809 Inf 17 0 18 0 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 639 0.0220446621327809 Inf 17 0 18 0 NM_025739 refGene chr4 116180039 - 96508 graph_last 62 192 gattaaaaca 640 0.0220446621327809 7 28 4 29 2 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 641 0.0220446621327809 Inf 17 0 18 0 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 642 0.0220446621327809 Inf 17 0 18 0 tccggcttgt 643 0.0220446621327809 Inf 17 0 18 0 NM_023579 refGene chr14 114054037 + 44438 graph_last l 10 67 tctggcagtc 644 0.0220446621327809 Inf 17 0 18 0 NM_198942 refGene chr17 80944018 - 61440 graph_last l 6 44 tgagtaagaa 645 0.0220446621327809 Inf 17 0 18 0 tagggcaatc 646 0.0231991932679516 2.37931034482759 69 29 72 14 gggtttttat 647 0.0237897965214260 2.8 56 20 58 10 NM_009836 refGene chr3 90467959 + 86658 graph_last 20 143 cacagaacca 648 0.0244802810565961 11 22 2 23 1 NM_010193 refGene chr9 65145351 - 138457 graph_last 18 100 gcaattgaca 649 0.0244802810565961 11 22 2 23 1 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 650 0.0244802810565961 11 22 2 23 1 gtgagcttgt 651 0.0244802810565961 11 22 2 23 1 ttaggcaagt 652 0.0244802810565961 11 22 2 23 1 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 653 0.0244802810565961 11 22 2 23 1 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 654 0.0251395119368213 5.16666666666667 31 6 32 3 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 655 0.0258902992094079 11.5 23 2 24 1 ttccccaccc 656 0.0258902992094079 11.5 23 2 24 1 ttggaacaat 657 0.0258902992094079 11.5 23 2 24 1 NM_026851 refGene chr14 45520384 + 41280 graph_last l 54 107 atctcaaacc 658 0.0262111197266342 0.222222222222222 6 27 6 13 NM_013681 refGene chr6 116901195 + 116249 graph_last l 100 219 ctggagatgt 659 0.0262111197266342 0.222222222222222 6 27 6 13 NM_011190 refGene chr14 46715568 - 41397 graph_last 42 75 gtgctggacc 660 0.0262111197266342 0.222222222222222 6 27 6 13 NM_175151 refGene chr15 60225897 + 47258 graph_last l 11 24 aacagtgagg 661 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_010211 refGene chrX 46437157 + 148620 graph_last l 37 60 acaaaaactc 662 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_153529 refGene chr13 36703885 - 33999 graph_last l 49 153 aggggccggt 663 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_024244 refGene chr10 72345115 - 13443 graph_last l 41 99 agttaaatcc 664 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_008410 refGene chr14 64927774 + 42663 graph_last l 23 33 agttgcttct 665 0.0264737586468394 0.0714285714285714 1 14 1 7 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 666 0.0264737586468394 0.455882352941176 31 68 32 33 NM_019713 refGene chr9 110198160 + 141255 graph_last l 40 75 ctcccgctct 667 0.0264737586468394 0.0714285714285714 1 14 1 7 ctgctaagat 668 0.0264737586468394 0.0714285714285714 1 14 1 7 cttattgaat 669 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_010048 refGene chr16 17445588 - 51970 graph_last l 28 55 gaaggcctct 670 0.0264737586468394 0.0714285714285714 1 14 1 7 gaataaaaca 671 0.0264737586468394 0.0714285714285714 1 14 1 7 gcagttcaca 672 0.0264737586468394 0.0714285714285714 1 14 1 7 AK122363 knownGene chr15_random 8940989 - 50612 graph_last l 31 45 gctaataaat 673 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_019549 refGene chr11 16977704 + 17866 graph_last l 34 60 gtctgcagta 674 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_172723 refGene chr5 137216718 - 107979 graph_last l 48 58 tcccctggaa 675 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_010950 refGene chr7_random 33673352 + 127195 graph_last 49 91 tcggtgcccg 676 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_172498 refGene chr14 57879884 - 42254 graph_last l 57 118 tctgtggaga 677 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_024227 refGene chr17 25720463 + 57976 graph_last l 39 83 tgccgagcac 678 0.0264737586468394 0.0714285714285714 1 14 1 7 NM_007512 refGene chr4 131191829 - 97730 graph_second 19 30 tgtctacaga 679 0.0264737586468394 0.0714285714285714 1 14 1 7 aagaaaccag 680 0.0268346303445191 3.21428571428571 45 14 47 7 NM_009441 refGene chr16 96243480 + 56249 graph_last l 164 458 ccttacactt 681 0.0276847365546638 3.41666666666667 41 12 43 6 gatgacacca 682 0.0276847365546638 3.28571428571429 46 14 48 7 ctgtaggtga 683 0.0295243488521639 1.68181818181818 148 88 154 43 aagaggcaag 684 0.0312700149581474 1.97872340425532 93 47 97 23 ccaaaaaaaa 685 0.0313813449245913 6.5 26 4 27 2 NM_023665 refGene chr4 133782708 + 98031 graph_last l 65 174 gttgaggttt 686 0.0313813449245913 6.5 26 4 27 2 ctcttactac 687 0.0320407574913273 0.303030303030303 10 33 10 16 NM_134101 refGene chr16 20286287 + 52183 graph_last l 67 197 gggagcgggc 688 0.0320407574913273 0.303030303030303 10 33 10 16 tggaagaaac 689 0.0320407574913273 0.303030303030303 10 33 10 16 gtgaaattat 690 0.0321255794102061 0.275862068965517 8 29 8 14 NM_007377 refGene chr11 119560366 - 25514 graph_last l 73 112 taaagtatat 691 0.0321255794102061 0.275862068965517 8 29 8 14 NM_133196 refGene chrX 122577518 + 151419 graph_last l 67 99 taacaatgta 692 0.0321255794102061 0.275862068965517 8 29 8 14 NM_025848 refGene chr9 52633577 - 137561 graph_last l 30 85 aagctcgaaa 693 0.0324662976331022 0.125 2 16 2 8 NM_145629 refGene chrX 65568515 - 149357 graph_last l 35 62 acacttttga 694 0.0324662976331022 0.125 2 16 2 8 NM_013719 refGene chr2 118746145 - 78295 graph_last l 88 188 agattactgt 695 0.0324662976331022 0.333333333333333 13 39 14 19 NM_026418 refGene chr7 120620011 - 125315 graph_last l 32 53 agattctgcc 696 0.0324662976331022 0.125 2 16 2 8 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 697 0.0324662976331022 0.125 2 16 2 8 NM_153457 refGene chr12 68119077 + 28767 graph_last l 53 116 cacttttttt 698 0.0324662976331022 0.125 2 16 2 8 NM_016876 refGene chr9 21445046 - 135590 graph_last 32 95 cagccaaacc 699 0.0324662976331022 0.125 2 16 2 8 NM_028967 refGene chr19 6179959 - 67652 graph_last l 47 89 ccaaaaggaa 700 0.0324662976331022 0.125 2 16 2 8 AK048138 knownGene chr15 80705321 - 48408 graph_last l 59 103 cgttccacca 701 0.0324662976331022 0.125 2 16 2 8 J05479 knownGene chr3 140847537 + 89686 graph_last l 38 69 cttacctcag 702 0.0324662976331022 0.125 2 16 2 8 NM_009785 refGene chr14 23439781 - 39995 graph_last l 32 60 gaaaccaatt 703 0.0324662976331022 0.125 2 16 2 8 NM_008529 refGene chr15 77212595 - 48057 graph_last l 45 123 gaggactgcc 704 0.0324662976331022 0.125 2 16 2 8 NM_009818 refGene chr18 35367639 - 63841 graph_last l 57 82 gggggagggt 705 0.0324662976331022 0.125 2 16 2 8 taatttttta 706 0.0324662976331022 0.125 2 16 2 8 NM_026603 refGene chr5 122406038 + 106854 graph_last l 22 39 tgtttctaac 707 0.0324662976331022 0.125 2 16 2 8 AK021160 knownGene chr9 114000545 + 141657 graph_last l 47 71 ttgctgctgc 708 0.0324662976331022 0.125 2 16 2 8 NM_010890 refGene chr9 75258934 + 139403 graph_last l 4 62 aaaacatctc 709 0.0343792229261787 Inf 15 0 16 0 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 710 0.0343792229261787 Inf 16 0 17 0 acttcagcca 711 0.0343792229261787 Inf 16 0 17 0 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 712 0.0343792229261787 Inf 16 0 17 0 caaatatgtt 713 0.0343792229261787 Inf 16 0 17 0 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 714 0.0343792229261787 Inf 15 0 16 0 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 715 0.0343792229261787 Inf 16 0 17 0 cttacatttc 716 0.0343792229261787 Inf 15 0 16 0 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 717 0.0343792229261787 Inf 15 0 16 0 gatgctgcca 718 0.0343792229261787 Inf 16 0 17 0 gccaaaccaa 719 0.0343792229261787 Inf 15 0 16 0 NM_010376 refGene chr2 153447870 + 80390 graph_last l 18 113 gccgctaggc 720 0.0343792229261787 Inf 15 0 16 0 NM_026959 refGene chr5 36556737 - 102112 graph_last l 19 123 ggccgtgtgc 721 0.0343792229261787 Inf 16 0 17 0 ggctttggtc 722 0.0343792229261787 Inf 15 0 16 0 NM_013933 refGene chr17 65714676 - 60662 graph_last l 25 111 gtatttaaca 723 0.0343792229261787 Inf 15 0 16 0 tccctgactt 724 0.0343792229261787 Inf 15 0 16 0 tcctcttccc 725 0.0343792229261787 Inf 15 0 16 0 cctttgagat 726 0.0346541546478034 3 48 16 50 8 cttaaactgc 727 0.0346541546478034 0.166666666666667 3 18 3 9 NM_008495 refGene chr15 80274617 + 48359 graph_last l 38 170 gcggcggatg 728 0.0346541546478034 0.166666666666667 3 18 3 9 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 729 0.0346541546478034 0.166666666666667 3 18 3 9 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 730 0.0346541546478034 3 48 16 50 8 tggtcaataa 731 0.0346541546478034 0.166666666666667 3 18 3 9 NM_008143 refGene chr11 48431601 - 19538 graph_last 39 63 ttcttgggga 732 0.0346541546478034 0.166666666666667 3 18 3 9 NM_024246 refGene chr3 90474993 + 86659 graph_last l 18 42 aaatagacat 733 0.0350504507621793 0.2 4 20 4 10 acgctgaata 734 0.0350504507621793 10.5 21 2 22 1 ctgtaaatag 735 0.0350504507621793 10.5 21 2 22 1 tagagactgc 736 0.0350504507621793 0.2 4 20 4 10 NM_174852 refGene chr11 77631623 + 21899 graph_last l 46 95 tctggtccgg 737 0.0350504507621793 0.2 4 20 4 10 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 738 0.0350504507621793 10.5 21 2 22 1 tttctttctg 739 0.0350504507621793 0.2 4 20 4 10 atccggcgcc 740 0.0356812579394212 0.259259259259259 7 27 7 13 ctgctggtgg 741 0.0356812579394212 0.259259259259259 7 27 7 13 NM_024258 refGene chr16 88840090 - 55746 graph_last l 66 153 gcaaaaccag 742 0.0356812579394212 0.259259259259259 7 27 7 13 NM_009457 refGene chrX 19235820 + 147564 graph_last l 47 288 tagccaagcc 743 0.0367075878704617 3.33333333333333 40 12 42 6 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 744 0.0370443394282859 2.47826086956522 57 23 59 11 NM_019444 refGene chr19 5660215 - 67592 graph_last l 63 144 aaggcttatt 745 0.0379122040160545 0 0 10 0 5 actatgttaa 746 0.0379122040160545 0 0 10 0 5 actctttcct 747 0.0379122040160545 0 0 10 0 5 NM_028198 refGene chr17 45636303 - 59545 graph_last l 18 41 agaaactcaa 748 0.0379122040160545 0 0 10 0 5 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 749 0.0379122040160545 0 0 10 0 5 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 750 0.0379122040160545 0 0 10 0 5 agggccatcc 751 0.0379122040160545 0 0 10 0 5 NM_021281 refGene chr3 98256903 + 87330 graph_last l 63 113 atagccccaa 752 0.0379122040160545 0 0 10 0 5 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 753 0.0379122040160545 0 0 10 0 5 NM_009721 refGene chr1 167488001 - 7965 graph_last l 32 73 atgcctccag 754 0.0379122040160545 0 0 10 0 5 attgagcggc 755 0.0379122040160545 0 0 10 0 5 NM_028217 refGene chr16 33892024 + 53134 graph_last l 12 14 caaatgcccg 756 0.0379122040160545 0 0 10 0 5 cacaaatatt 757 0.0379122040160545 0 0 10 0 5 NM_010239 refGene chr19 9869090 - 67950 graph_last 15 18 cactgcctca 758 0.0379122040160545 0 0 10 0 5 BC057070 knownGene chr18 61123409 - 65253 graph_last l 19 38 cagcatatga 759 0.0379122040160545 0 0 10 0 5 NM_009155 refGene chr15 3359645 + 44888 graph_last l 31 50 cagtgcaact 760 0.0379122040160545 0 0 10 0 5 cattaaatta 761 0.0379122040160545 0 0 10 0 5 cattcctttg 762 0.0379122040160545 0 0 10 0 5 NM_175287 refGene chr4 152075221 + 99631 graph_last l 12 22 ccagactgat 763 0.0379122040160545 0 0 10 0 5 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 764 0.0379122040160545 0 0 10 0 5 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 765 0.0379122040160545 0 0 10 0 5 NM_133849 refGene chr2 179910762 - 82351 graph_last l 64 92 ctctgcaatc 766 0.0379122040160545 0 0 10 0 5 BC044772 knownGene chr12 19510819 + 26628 graph_last l 43 59 ctgtttttac 767 0.0379122040160545 0 0 10 0 5 NM_007883 refGene chr18 20869274 - 63182 graph_last 9 18 gaacggggaa 768 0.0379122040160545 0 0 10 0 5 NM_026511 refGene chr12 107277209 - 31366 graph_last l 11 32 gagcctaaat 769 0.0379122040160545 0 0 10 0 5 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 770 0.0379122040160545 0 0 10 0 5 NM_009696 refGene chr7 16663032 - 119339 graph_second l 7 15 gaggaggtgc 771 0.0379122040160545 0 0 10 0 5 gagttataat 772 0.0379122040160545 0 0 10 0 5 gcaccgaaca 773 0.0379122040160545 0.543478260869565 50 92 52 45 NM_033610 refGene chr13 54537884 + 35079 graph_second l 52 109 gcacgacctg 774 0.0379122040160545 0 0 10 0 5 gcccactgcc 775 0.0379122040160545 0 0 10 0 5 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 776 0.0379122040160545 0 0 10 0 5 gctgagtaac 777 0.0379122040160545 0 0 10 0 5 NM_133981 refGene chr9 52800622 - 137583 graph_last l 26 72 gctgctgtct 778 0.0379122040160545 0 0 10 0 5 NM_009983 refGene chr7 134433932 - 126175 graph_second l 15 26 ggaatggaca 779 0.0379122040160545 0 0 10 0 5 NM_007755 refGene chr7_random 48092565 + 127493 graph_last l 16 28 ggagctagct 780 0.0379122040160545 0 0 10 0 5 NM_019924 refGene chr19_random 8661744 + 71226 graph_last l 18 47 ggcacagctg 781 0.0379122040160545 0 0 10 0 5 NM_024200 refGene chr3 33472519 + 84071 graph_last l 21 43 ggcatcatcg 782 0.0379122040160545 0 0 10 0 5 ggcatctttt 783 0.0379122040160545 0 0 10 0 5 NM_138650 refGene chr16 22099482 - 52333 graph_last l 18 37 ggtacttgtt 784 0.0379122040160545 0 0 10 0 5 AK014916 all_mrna chr9 51496996 - 137503 graph_last 0 69 ggtgtacata 785 0.0379122040160545 0 0 10 0 5 gtacctgctt 786 0.0379122040160545 0 0 10 0 5 gtatatatat 787 0.0379122040160545 0 0 10 0 5 gtccaggcgc 788 0.0379122040160545 0 0 10 0 5 gtggcataag 789 0.0379122040160545 0 0 10 0 5 gtggctcaaa 790 0.0379122040160545 0 0 10 0 5 NM_009976 refGene chr2 149271710 + 80122 graph_last l 15 29 gttggctagg 791 0.0379122040160545 0 0 10 0 5 NM_026255 refGene chr6 96160746 - 115218 graph_last l 21 61 taaaatattg 792 0.0379122040160545 0 0 10 0 5 NM_007733 refGene chr1 24938845 + 1003 graph_last l 14 23 taaaggattt 793 0.0379122040160545 0 0 10 0 5 NM_175015 refGene chr2 74302932 - 75802 graph_second l 12 13 taacagaaat 794 0.0379122040160545 0 0 10 0 5 NM_027287 refGene chr3 156096423 - 90410 graph_last l 36 63 tatatagatt 795 0.0379122040160545 0 0 10 0 5 NM_008950 refGene chr11 105926902 + 24478 graph_last l 98 252 tccatcaaga 796 0.0379122040160545 0.324324324324324 12 37 13 18 NM_013509 refGene chr6 126683937 - 116901 graph_last l 77 103 tcccacagtt 797 0.0379122040160545 0 0 10 0 5 tccctgtgta 798 0.0379122040160545 0 0 10 0 5 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 799 0.0379122040160545 0 0 10 0 5 BC003217 knownGene chr17 62607440 - 60440 graph_second 5 7 tcgatcttgg 800 0.0379122040160545 0 0 10 0 5 tctgccacaa 801 0.0379122040160545 0 0 10 0 5 NM_029573 refGene chr9 56719982 - 137782 graph_last l 6 6 tgcatccatt 802 0.0379122040160545 0 0 10 0 5 NM_009987 refGene chr9 122424852 - 142152 graph_last l 19 31 tgcattgtga 803 0.0379122040160545 0 0 10 0 5 genomic chr18 36478939 + 0 unique_long l 36 52 tgctttataa 804 0.0379122040160545 0 0 10 0 5 NM_024457 refGene chr10 120856422 - 16149 graph_last 28 67 tgtaactggt 805 0.0379122040160545 0 0 10 0 5 NM_009513 refGene chr13 25140246 + 33437 graph_last l 19 27 tgttatttac 806 0.0379122040160545 0 0 10 0 5 NM_177086 refGene chr8 22964536 + 128594 graph_last l 49 68 ttaaactacc 807 0.0379122040160545 0 0 10 0 5 NM_008990 refGene chr7 16667851 - 119346 graph_last 27 70 tttataagtt 808 0.0379122040160545 0 0 10 0 5 NM_053071 refGene chr15 36415656 + 46234 graph_last l 20 28 tttcatagtt 809 0.0379122040160545 0 0 10 0 5 aagacccacc 810 0.0409263270410863 0.24 6 25 6 12 NM_013931 refGene chr17 24492055 - 57845 graph_last l 56 126 agtgtgacgt 811 0.0409263270410863 0.24 6 25 6 12 NM_010411 refGene chr18 38054458 - 64117 graph_last l 53 97 caaggtgaac 812 0.0409263270410863 0.24 6 25 6 12 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 813 0.0418516645601486 6.25 25 4 26 2 gttctttcgt 814 0.0418516645601486 6.25 25 4 26 2 gccgttctta 815 0.0449223759726195 0.544444444444444 49 90 51 44 atccgaaaga 816 0.0459508999561465 2.20689655172414 64 29 67 14 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 817 0.0460227636426816 0.4 18 45 19 22 acagtgggga 818 0.0474577855800218 4.66666666666667 28 6 29 3 NM_080633 refGene chr15 83461809 + 48679 graph_last l 115 306 caactgtatt 819 0.0476219025293074 0.314285714285714 11 35 12 17 agaaataaat 820 0.047849750226529 4.83333333333333 29 6 30 3 NM_183171 refGene chr9 37655139 + 136457 graph_last b 58 291 atcgggcgca 821 0.047849750226529 4.83333333333333 29 6 30 3 NM_013559 refGene chr5 148461615 - 108790 graph_last l 171 343 tgatcattgt 822 0.048113720425998 0.428571428571429 21 49 22 24 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 823 0.0484203282686702 0.555555555555556 50 90 52 44 agctcttgta 824 0.0487101740648555 Inf 14 0 15 0 cagcaacctt 825 0.0487101740648555 Inf 14 0 15 0 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 826 0.0487101740648555 Inf 14 0 15 0 cctgatcttt 827 0.0487101740648555 3.5 35 10 37 5 BC056498 knownGene chr7 134061373 + 126130 graph_last b 31 160 cggattcgca 828 0.0487101740648555 Inf 14 0 15 0 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 829 0.0487101740648555 Inf 14 0 15 0 gattctccga 830 0.0487101740648555 Inf 14 0 15 0 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 831 0.0487101740648555 Inf 14 0 15 0 NM_023526 refGene chr14 13638419 - 39306 graph_last 11 60 tagttaatgt 832 0.0487101740648555 Inf 14 0 15 0 NM_025548 refGene chr7 24142854 - 119914 graph_last 20 67 tatgtaggac 833 0.0487101740648555 Inf 14 0 15 0 tgaagacagt 834 0.0487101740648555 Inf 14 0 15 0 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 835 0.0487101740648555 3.5 35 10 37 5 NM_027276 refGene chr8 14486036 + 128170 graph_last l 9 87 tgccagagta 836 0.0487101740648555 Inf 14 0 15 0 tgctgtgaaa 837 0.0487657889291033 0.485714285714286 34 70 36 34 NM_178631 refGene chr3 13949517 + 83169 graph_second 0 146 acgggcaaaa 838 0.0499700323929796 9.5 19 2 20 1 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 839 0.0499700323929796 9.5 19 2 20 1 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 840 0.0499700323929796 9.5 19 2 20 1 NM_016903 refGene chr14 66316418 + 42711 graph_last l 57 194 ctcctgcagc 841 0.0499700323929796 9.5 19 2 20 1 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 842 0.0499700323929796 9.5 19 2 20 1 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 843 0.0499700323929796 9.5 19 2 20 1 gattagggtg 844 0.0499700323929796 9.5 19 2 20 1 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 845 0.0499700323929796 9.5 19 2 20 1 NM_010911 refGene chr2 156770802 + 80726 graph_last 24 122 gccattggaa 846 0.0499700323929796 9.5 19 2 20 1 gtgatgttgc 847 0.0499700323929796 9.5 19 2 20 1 NM_010895 refGene chr11 97910831 - 23629 graph_last b 21 98 tacgaggagc 848 0.0499700323929796 9.5 19 2 20 1 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 849 0.0502344478783139 10 20 2 21 1 gcaatttaac 850 0.0502344478783139 10 20 2 21 1 AK028542 knownGene chr1 139190833 - 6589 graph_last l 26 97 gcaccaactg 851 0.0502344478783139 10 20 2 21 1 gcctctggtg 852 0.0502344478783139 10 20 2 21 1 NM_025797 refGene chr18 84591883 + 66590 graph_last l 24 105 gtgatgtttc 853 0.0502344478783139 10 20 2 21 1 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 854 0.0502344478783139 10 20 2 21 1 NM_008254 refGene chr4 134747711 - 98101 graph_last l 46 180 tggttttggg 855 0.0502344478783139 10 20 2 21 1 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 856 0.0507698146299346 0.404255319148936 19 47 20 23 NM_009271 refGene chr2 158097469 + 80874 graph_last l 49 96 cccaggcttg 857 0.0529513415113793 0.217391304347826 5 23 5 11 aaaaagtacc 858 0.0563888301701615 0.0833333333333333 1 12 1 6 genomic chrM 1072 - 0 unique_long l 20 60 aaatcttctg 859 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_078478 refGene chr14 31666620 - 40471 graph_last l 66 123 aacaaagcaa 860 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 861 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_027379 refGene chr7 105422408 - 124385 graph_last l 25 36 agaagcttag 862 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_020559 refGene chr9 108794011 - 141155 graph_last l 34 54 agcaagatgg 863 0.0563888301701615 0.0833333333333333 1 12 1 6 attgtgtaat 864 0.0563888301701615 0.0833333333333333 1 12 1 6 BQ445501 all_est chr3 101643042 + 87631 graph_second 26 30 caaaaatgaa 865 0.0563888301701615 0.0833333333333333 1 12 1 6 caagtgcact 866 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_153555 refGene chr1 176055693 - 8542 graph_last l 26 51 cactactgag 867 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_008113 refGene chr17 25805275 + 57991 graph_last l 39 44 cagctcccaa 868 0.0563888301701615 0.0833333333333333 1 12 1 6 genomic chr7 119948355 + 0 unique_long l 16 25 caggtctggg 869 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_015748 refGene chr19 41668099 - 69826 graph_last l 17 27 ccctctctca 870 0.0563888301701615 0.0833333333333333 1 12 1 6 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 871 0.0563888301701615 0.0833333333333333 1 12 1 6 cttgcaatct 872 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 873 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_018763 refGene chr9 97829313 - 140418 graph_last l 27 73 gccgtgctgg 874 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_198411 refGene chr12 108187679 - 31436 graph_last 1 53 ggggttgggg 875 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_008847 refGene chr3 97760912 - 87266 graph_last l 17 52 gggttgctgg 876 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_181883 refGene chr1 134741038 + 6192 graph_last l 26 40 tacttttggc 877 0.0563888301701615 0.0833333333333333 1 12 1 6 tatagatatg 878 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_026384 refGene chr7 91430150 - 123368 graph_last l 31 77 tcacactttt 879 0.0563888301701615 0.0833333333333333 1 12 1 6 X68881 knownGene chr6 86615762 + 114478 graph_last l 27 30 tcccccttcc 880 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_029738 refGene chr16 3374181 + 51019 graph_last l 57 80 tgattttcat 881 0.0563888301701615 0.0833333333333333 1 12 1 6 tttatttttt 882 0.0563888301701615 0.0833333333333333 1 12 1 6 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 883 0.0585904512704215 0.491803278688525 30 61 31 30 NM_027439 refGene chrX 11164881 + 147275 graph_last l 143 350 tgcaaatgga 884 0.0593470782946092 0.28 7 25 7 12 NM_177049 refGene chr14 46207444 - 41370 graph_last l 62 211 gaatttggga 885 0.0595336080243887 5.75 23 4 24 2 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 886 0.0595336080243887 5.75 23 4 24 2 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 887 0.0595336080243887 5.75 23 4 24 2 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 888 0.0595336080243887 5.75 23 4 24 2 tttctgtatg 889 0.0595336080243887 5.75 23 4 24 2 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 890 0.061814696723916 6 24 4 25 2 NM_009308 refGene chr18 31773653 + 63593 graph_last l 23 112 gctacttaag 891 0.061814696723916 6 24 4 25 2 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 892 0.064264403217685 3.08333333333333 37 12 39 6 caccaccaca 893 0.064264403217685 3.08333333333333 37 12 39 6 AF133818 knownGene chr3 161696867 + 90649 graph_last 0 50 aatttaagtg 894 0.0643147942705201 0.142857142857143 2 14 2 7 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 895 0.0643147942705201 0.142857142857143 2 14 2 7 cccactggat 896 0.0643147942705201 0.142857142857143 2 14 2 7 ccctgatttt 897 0.0643147942705201 4.5 27 6 28 3 cctcttcccc 898 0.0643147942705201 0.142857142857143 2 14 2 7 NM_019811 refGene chr2 156115918 - 80658 graph_last l 40 67 ctatccttga 899 0.0643147942705201 0.142857142857143 2 14 2 7 NM_011551 refGene chr11 101970178 - 24060 graph_last l 24 52 gacaatggac 900 0.0643147942705201 0.142857142857143 2 14 2 7 gactacagta 901 0.0643147942705201 0.142857142857143 2 14 2 7 AK122380 knownGene chr8 84803497 + 131761 graph_last l 86 147 gcaggtcccc 902 0.0643147942705201 0.142857142857143 2 14 2 7 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 903 0.0643147942705201 0.142857142857143 2 14 2 7 gccttggtga 904 0.0643147942705201 0.142857142857143 2 14 2 7 ggacttaaca 905 0.0643147942705201 0.142857142857143 2 14 2 7 NM_015814 refGene chr7 104213348 - 124305 graph_last l 70 135 ggagcgctat 906 0.0643147942705201 0.142857142857143 2 14 2 7 NM_153136 refGene chr14 62133432 + 42533 graph_last l 42 84 ggggacgcat 907 0.0643147942705201 0.142857142857143 2 14 2 7 tgcccaagaa 908 0.0643147942705201 0.142857142857143 2 14 2 7 NM_016759 refGene chr11 102067093 - 24069 graph_last l 37 69 tttgttatag 909 0.0643147942705201 0.142857142857143 2 14 2 7 NM_011042 refGene chr15 104593003 + 50270 graph_last 85 352 gaaatgtaag 910 0.0644507994520373 2.5 50 20 52 10 NM_145925 refGene chr10 79724211 + 13823 graph_last l 17 61 aagccacaga 911 0.0646099064232676 0.222222222222222 4 18 4 9 ccctcctccc 912 0.0646099064232676 0.222222222222222 4 18 4 9 NM_011306 refGene chr17 33664773 - 58807 graph_last l 25 63 ctgaatatgg 913 0.0646099064232676 0.222222222222222 4 18 4 9 NM_011119 refGene chr10 131835145 - 16829 graph_last l 29 58 gcattaaaat 914 0.0646099064232676 0.222222222222222 4 18 4 9 NM_019535 refGene chr4 84058309 + 94668 graph_last l 76 184 gccagttttc 915 0.0646099064232676 0.222222222222222 4 18 4 9 AA607899 all_est chr2 119877739 + 78422 graph_last l 73 275 agcagagaat 916 0.0655196061881995 3.4 34 10 35 5 AK019388 knownGene chr13 57917174 - 35327 graph_last l 70 248 caatagaatt 917 0.0655196061881995 3.4 34 10 36 5 BC055476 knownGene chr7 16109922 + 119258 graph_last l 53 93 ccttgtggga 918 0.0655196061881995 0.1875 3 16 3 8 gaaaatatcc 919 0.0655196061881995 3.875 31 8 32 4 NM_019561 refGene chr3 98332142 + 87345 graph_last l 37 123 gagccccttg 920 0.0655196061881995 0.1875 3 16 3 8 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 921 0.0655196061881995 3.875 31 8 32 4 ggcccccaca 922 0.0655196061881995 0.1875 3 16 3 8 NM_019402 refGene chr14 45986663 + 41330 graph_last 48 272 gtattcccct 923 0.0655196061881995 3.875 31 8 32 4 NM_148938 refGene chr15 9001386 - 45224 graph_last l 46 100 tatagaaagg 924 0.0655196061881995 0.1875 3 16 3 8 NM_146152 refGene chr4 116803108 - 96557 graph_last l 50 88 tgtgtcccgc 925 0.0655196061881995 0.1875 3 16 3 8 NM_017394 refGene chr7 29344985 + 120255 graph_last l 45 77 ttgtttattg 926 0.0655196061881995 0.1875 3 16 3 8 NM_019678 refGene chr16 57132255 - 54453 graph_last l 52 78 atgtactaaa 927 0.0696503894401421 0.260869565217391 6 23 6 11 cccacaaggt 928 0.0696503894401421 2.61111111111111 47 18 49 9 NM_012061 refGene chr14 7708680 - 39067 graph_last l 85 150 tacattgcac 929 0.0696503894401421 0.260869565217391 6 23 6 11 NM_133937 refGene chr6 115376406 + 116150 graph_last l 80 189 cttccctaat 930 0.0711966908943892 0.333333333333333 11 33 12 16 cgccgccggc 931 0.0717897334438964 1.71428571428571 108 63 113 31 NM_007379 refGene chr2 25714940 + 72843 graph_last l 17 177 ggagcaggac 932 0.0717897334438964 9 18 2 19 1 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 933 0.0717897334438964 9 18 2 19 1 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 934 0.0717897334438964 9 18 2 19 1 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 935 0.0723787509795596 Inf 13 0 14 0 NM_010160 refGene chr2 6465097 - 71738 graph_last l 17 51 acatttattg 936 0.0723787509795596 Inf 13 0 14 0 atgcgagtga 937 0.0723787509795596 Inf 13 0 14 0 AK034974 all_mrna chr2 53183992 + 74573 graph_last 0 77 atgttaaaaa 938 0.0723787509795596 Inf 13 0 14 0 attaatcaaa 939 0.0723787509795596 Inf 13 0 14 0 atttgtatct 940 0.0723787509795596 Inf 13 0 14 0 NM_133215 refGene chr11 87176620 + 22801 graph_last l 15 62 caatgtgctg 941 0.0723787509795596 Inf 13 0 14 0 cactgttgag 942 0.0723787509795596 Inf 13 0 14 0 cagagctccc 943 0.0723787509795596 Inf 13 0 14 0 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 944 0.0723787509795596 Inf 13 0 14 0 NM_183252 refGene chr1 43390024 + 1858 graph_last l 11 51 cctaaagatt 945 0.0723787509795596 Inf 13 0 14 0 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 946 0.0723787509795596 Inf 13 0 14 0 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 947 0.0723787509795596 Inf 13 0 14 0 gaacttaaag 948 0.0723787509795596 Inf 13 0 14 0 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 949 0.0723787509795596 Inf 13 0 14 0 ggggtacctg 950 0.0723787509795596 Inf 13 0 14 0 NM_008853 refGene chrX 89302940 - 150228 graph_last l 34 113 ggttaatgtt 951 0.0723787509795596 Inf 13 0 14 0 NM_025520 refGene chr6 57159890 - 113026 graph_last 7 60 gttattttgg 952 0.0723787509795596 Inf 13 0 14 0 taaacagaaa 953 0.0723787509795596 Inf 13 0 14 0 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 954 0.0723787509795596 Inf 13 0 14 0 NM_178917 refGene chr2_random 1824269 - 82583 graph_last l 13 59 tgggaaatga 955 0.0723787509795596 Inf 13 0 14 0 tgtatgtctg 956 0.0723787509795596 Inf 13 0 14 0 BC051169 knownGene chr15 28595290 - 45887 graph_last l 15 58 tttacacagt 957 0.0723787509795596 Inf 13 0 14 0 NM_029626 refGene chr14 25538917 - 40096 graph_last l 73 155 gcttcatttc 958 0.0762602939039885 0.296296296296296 8 27 8 13 NM_133656 refGene chr11 75277290 + 21624 graph_last l 64 118 tattgtatat 959 0.0762602939039885 0.296296296296296 8 27 8 13 AV205517 all_est chr14 68107603 - 42855 graph_last l 56 129 tggccctctg 960 0.0762602939039885 0.296296296296296 8 27 8 13 NM_019817 refGene chr15_random 21717553 - 50853 graph_last l 76 148 cactggctga 961 0.0775098814328702 0.378378378378378 14 37 15 18 gtggcttaca 962 0.0819176738991187 0.414634146341463 17 41 18 20 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 963 0.0836595819978602 2.45 49 20 51 10 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 964 0.085045025365145 5.5 22 4 23 2 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 965 0.085045025365145 5.5 22 4 23 2 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 966 0.085045025365145 5.5 22 4 23 2 NM_177343 refGene chr2 5212156 - 71660 graph_last l 37 60 tatacatatc 967 0.0878970986013066 0.25 5 20 5 10 CF901669 all_est chrUn_random 3536148 + 142725 graph_last l 86 142 tccccctcaa 968 0.0878970986013066 0.25 5 20 5 10 aaaaaaaaat 969 0.0881652910042136 0 0 8 0 4 NM_031376 refGene chr19 41338463 - 69791 graph_last l 4 4 aaaccattgt 970 0.0881652910042136 0 0 8 0 4 NM_025808 refGene chr16 17130765 + 51924 graph_last l 20 55 aaacggtaag 971 0.0881652910042136 0 0 8 0 4 aacttctgct 972 0.0881652910042136 0 0 8 0 4 aagatgatat 973 0.0881652910042136 0 0 8 0 4 AB016490 knownGene chr3 92649260 + 86894 graph_last l 23 53 acacagactt 974 0.0881652910042136 0 0 8 0 4 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 975 0.0881652910042136 0 0 8 0 4 acagtgcctg 976 0.0881652910042136 3.75 30 8 31 4 acattatttt 977 0.0881652910042136 0 0 8 0 4 NM_026428 refGene chr11 120278461 - 25608 graph_last l 5 12 accactggct 978 0.0881652910042136 0 0 8 0 4 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 979 0.0881652910042136 0 0 8 0 4 NM_007589 refGene chr7 13971700 - 119114 graph_second 6 15 acgaacctgg 980 0.0881652910042136 0 0 8 0 4 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 981 0.0881652910042136 0 0 8 0 4 NM_009947 refGene chr14 46618119 + 41387 graph_last l 16 53 actgcctctc 982 0.0881652910042136 0 0 8 0 4 actttagaat 983 0.0881652910042136 0 0 8 0 4 NM_148673 refGene chr11 43346465 + 19280 graph_last l 9 13 agaaaatcag 984 0.0881652910042136 0 0 8 0 4 NM_025297 refGene chr4 130542137 + 97633 graph_last l 8 19 agaaccccag 985 0.0881652910042136 0 0 8 0 4 aggaggaagt 986 0.0881652910042136 0 0 8 0 4 AK051233 all_mrna chr14 16044346 + 39487 graph_last 0 26 aggcagaggc 987 0.0881652910042136 0 0 8 0 4 NM_009156 refGene chr7 12915304 - 118959 graph_second l 8 17 agttccccgg 988 0.0881652910042136 0 0 8 0 4 AK037402 all_mrna chr10 23589848 - 10945 graph_last 1 35 ataaatgtta 989 0.0881652910042136 0 0 8 0 4 NM_145452 refGene chr13 83351423 + 36558 graph_last 0 8 ataccactgg 990 0.0881652910042136 0 0 8 0 4 atccttctag 991 0.0881652910042136 0 0 8 0 4 NM_199301 refGene chr7 132043018 - 125964 graph_last l 23 264 atgaaacttt 992 0.0881652910042136 0 0 8 0 4 atgctcatta 993 0.0881652910042136 0 0 8 0 4 NM_011322 refGene chr7 25140350 - 120019 graph_last l 12 16 atgggtgaag 994 0.0881652910042136 0 0 8 0 4 attttcatca 995 0.0881652910042136 0 0 8 0 4 caaaatacat 996 0.0881652910042136 0.59375 57 96 60 47 caagaacaca 997 0.0881652910042136 0 0 8 0 4 NM_146131 refGene chr3 91692361 + 86820 graph_last l 20 38 cacccagctc 998 0.0881652910042136 0 0 8 0 4 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 999 0.0881652910042136 0 0 8 0 4 genomic chr16 36843806 - 0 unique_long l 10 13 cagatataaa 1000 0.0881652910042136 0 0 8 0 4 NM_013671 refGene chr17 13082834 - 57140 graph_last l 33 53 cagctgcacc 1001 0.0881652910042136 0 0 8 0 4 NM_009790 refGene chr12 95768593 + 30604 graph_last l 111 171 cagcttgatg 1002 0.0881652910042136 0.333333333333333 9 27 9 13 catacataca 1003 0.0881652910042136 0 0 8 0 4 ccatctgggg 1004 0.0881652910042136 0 0 8 0 4 NM_027862 refGene chr11 114924062 - 25078 graph_last 14 16 ccccaaaacc 1005 0.0881652910042136 0 0 8 0 4 NM_023341 refGene chr1 184262377 - 9046 graph_last l 14 24 ccccaggaga 1006 0.0881652910042136 0 0 8 0 4 genomic chr1 17746620 + 0 unique_long l 8 13 cccccaaaaa 1007 0.0881652910042136 0 0 8 0 4 cccccagcag 1008 0.0881652910042136 0 0 8 0 4 NM_009755 refGene chr14 62028140 - 42526 graph_last l 17 34 ccctcctgtc 1009 0.0881652910042136 0 0 8 0 4 NM_012028 refGene chr3 156783440 - 90452 graph_last l 5 9 ccctttcatt 1010 0.0881652910042136 0 0 8 0 4 cctgattttt 1011 0.0881652910042136 0 0 8 0 4 NM_177699 refGene chr8 106838263 + 132950 graph_last l 55 134 cctggagcag 1012 0.0881652910042136 0.354838709677419 11 31 11 15 NM_008401 refGene chr7 120261952 + 125293 graph_last l 5 8 cgacagtgaa 1013 0.0881652910042136 0 0 8 0 4 NM_138749 refGene chr15 90824776 - 49240 graph_last l 11 31 cgggacccca 1014 0.0881652910042136 0 0 8 0 4 NM_008131 refGene chr1 157362291 + 7351 graph_last 22 65 cgggaggaga 1015 0.0881652910042136 0 0 8 0 4 NM_025301 refGene chr7 97942114 - 123913 graph_last l 27 54 cgtatggctg 1016 0.0881652910042136 0 0 8 0 4 NM_010777 refGene chr18 82283307 - 66444 graph_last l 19 29 ctaaatcaaa 1017 0.0881652910042136 0 0 8 0 4 NM_145218 refGene chr5 129992486 + 107379 graph_last l 8 30 ctagggtaac 1018 0.0881652910042136 0 0 8 0 4 NM_009142 refGene chr8 96065511 + 132522 graph_last l 78 152 ctccacagaa 1019 0.0881652910042136 0 0 8 0 4 ctctggaaag 1020 0.0881652910042136 0 0 8 0 4 NM_173401 refGene chr4 146266322 - 99145 graph_last l 27 62 cttgcctaga 1021 0.0881652910042136 0 0 8 0 4 AK122446 knownGene chr6 123076982 - 116748 graph_last l 18 32 gaacatccct 1022 0.0881652910042136 0 0 8 0 4 gagaaatacc 1023 0.0881652910042136 0 0 8 0 4 gagaaatgtt 1024 0.0881652910042136 0 0 8 0 4 NM_007862 refGene chr16 31584964 + 52830 graph_last 29 52 gagtttgatt 1025 0.0881652910042136 0 0 8 0 4 gattgaagag 1026 0.0881652910042136 0 0 8 0 4 genomic chr5 48503682 - 0 unique_long l 4 4 gcaataattg 1027 0.0881652910042136 0 0 8 0 4 genomic chr13 54164084 - 0 unique_long l 6 8 gcacaggcca 1028 0.0881652910042136 0 0 8 0 4 NM_009976 refGene chr2 149268091 + 80122 graph_last l 49 73 gcaggtactg 1029 0.0881652910042136 0 0 8 0 4 NM_052992 refGene chr7 25015399 - 120008 graph_last 14 36 gccagtgcag 1030 0.0881652910042136 0 0 8 0 4 gcctcagagt 1031 0.0881652910042136 0 0 8 0 4 NM_025522 refGene chr12 68559585 - 28804 graph_last l 16 38 gctaaactgc 1032 0.0881652910042136 0 0 8 0 4 gctccagcct 1033 0.0881652910042136 0 0 8 0 4 genomic chr7_random 46671184 + 0 unique_long l 12 13 gctctgatct 1034 0.0881652910042136 0 0 8 0 4 NM_008593 refGene chr4 113815543 - 96269 graph_last 0 51 gcttgaaaaa 1035 0.0881652910042136 0 0 8 0 4 ggacctcctt 1036 0.0881652910042136 0 0 8 0 4 BM942840 all_est chr10 130365957 + 16657 graph_last l 16 32 gggatggggt 1037 0.0881652910042136 0 0 8 0 4 gggccctcct 1038 0.0881652910042136 0 0 8 0 4 NM_026385 refGene chr8 95958860 - 132518 graph_last l 37 92 gggttaatgg 1039 0.0881652910042136 0 0 8 0 4 AW488838 all_est chr4 153895083 - 99810 graph_last l 41 65 ggtcatctct 1040 0.0881652910042136 0 0 8 0 4 NM_133852 refGene chr2 32579832 + 73422 graph_last l 19 33 ggtcctcagg 1041 0.0881652910042136 0 0 8 0 4 gtagccagca 1042 0.0881652910042136 0 0 8 0 4 NM_009667 refGene chr7 102807772 - 124232 graph_last l 22 37 gtaggaaatt 1043 0.0881652910042136 0 0 8 0 4 gtagttttct 1044 0.0881652910042136 0 0 8 0 4 NM_172473 refGene chr10 47362986 + 12180 graph_last l 19 95 gtataaagtt 1045 0.0881652910042136 0 0 8 0 4 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 1046 0.0881652910042136 0 0 8 0 4 NM_008770 refGene chr3 32070310 - 84008 graph_last l 46 70 gtctctaaca 1047 0.0881652910042136 0 0 8 0 4 NM_007933 refGene chr11 70224068 + 21160 graph_last 0 21 gtgacagtga 1048 0.0881652910042136 0 0 8 0 4 genomic chr1 167488048 + 0 unique_long l 16 46 gtggaagaat 1049 0.0881652910042136 0 0 8 0 4 gtggactcaa 1050 0.0881652910042136 0 0 8 0 4 taaaataaat 1051 0.0881652910042136 0 0 8 0 4 NM_145969 refGene chr14 21138985 + 39829 graph_last l 9 13 taagccctat 1052 0.0881652910042136 0 0 8 0 4 taaggggaaa 1053 0.0881652910042136 0 0 8 0 4 NM_019790 refGene chr1 52348560 + 2199 graph_last l 24 41 tactacagct 1054 0.0881652910042136 0 0 8 0 4 AK081899 knownGene chr11 97426979 + 23566 graph_last l 16 20 tactatacac 1055 0.0881652910042136 0 0 8 0 4 tagtaatatt 1056 0.0881652910042136 0 0 8 0 4 NM_176971 refGene chrX 125431382 - 151565 graph_last l 5 9 tattgacttt 1057 0.0881652910042136 0 0 8 0 4 NM_009790 refGene chr12 95768436 + 30604 graph_last l 15 29 tattggtcgg 1058 0.0881652910042136 0 0 8 0 4 NM_026163 refGene chr16 15875039 + 51810 graph_last l 11 13 tcacttcctt 1059 0.0881652910042136 0 0 8 0 4 NM_008792 refGene chr2 143886399 + 79800 graph_last l 24 41 tccaagaagc 1060 0.0881652910042136 0 0 8 0 4 NM_027398 refGene chr11 33528227 - 18852 graph_last l 13 14 tccctccaag 1061 0.0881652910042136 0 0 8 0 4 NM_008398 refGene chr10 132235678 + 16883 graph_last l 8 12 tcctgataca 1062 0.0881652910042136 0 0 8 0 4 BI645586 all_est chr13 67345316 - 35928 graph_last 0 38 tctgtataat 1063 0.0881652910042136 0 0 8 0 4 NM_146098 refGene chr19 29304327 - 69086 graph_last l 16 35 tctgtccatc 1064 0.0881652910042136 0 0 8 0 4 genomic chr8 77876345 + 0 unique_long l 18 29 tctgtctttg 1065 0.0881652910042136 0 0 8 0 4 NM_023328 refGene chr13 59233431 - 35436 graph_last l 99 174 tgaactgtgt 1066 0.0881652910042136 0.418604651162791 18 43 19 21 AA499330 all_est chr19 53490606 + 70514 graph_last l 18 25 tgaatgtgaa 1067 0.0881652910042136 0 0 8 0 4 tgacagctgc 1068 0.0881652910042136 0 0 8 0 4 tgagccatta 1069 0.0881652910042136 0 0 8 0 4 NM_175194 refGene chr10 64841940 + 12992 graph_last l 18 23 tgatttgtaa 1070 0.0881652910042136 0 0 8 0 4 NM_016762 refGene chr15 34847802 + 46143 graph_last l 10 19 tgcataagtc 1071 0.0881652910042136 0 0 8 0 4 NM_011400 refGene chr4 118250215 + 96665 graph_last l 4 6 tgcttccagt 1072 0.0881652910042136 0 0 8 0 4 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 1073 0.0881652910042136 0.446808510638298 21 47 22 23 tggcagtgga 1074 0.0881652910042136 0 0 8 0 4 tggctctagc 1075 0.0881652910042136 0 0 8 0 4 NM_146157 refGene chr4 138220479 - 98421 graph_last 14 36 tgggacgccc 1076 0.0881652910042136 0 0 8 0 4 NM_134017 refGene chr11 40299911 - 19146 graph_last l 13 14 tggttataat 1077 0.0881652910042136 0 0 8 0 4 BE651473 all_est chr6 113269725 - 116003 graph_second l 5 6 tggtttattg 1078 0.0881652910042136 0 0 8 0 4 NM_009819 refGene chr6 78657814 - 114084 graph_last l 2 36 tgtaatttta 1079 0.0881652910042136 0 0 8 0 4 tgtggaggag 1080 0.0881652910042136 0 0 8 0 4 tgttttattg 1081 0.0881652910042136 0 0 8 0 4 ttaaaagcca 1082 0.0881652910042136 0 0 8 0 4 ttaataaaat 1083 0.0881652910042136 0.354838709677419 11 31 11 15 NM_010814 refGene chr17 36763077 - 59103 graph_last l 23 48 ttagtctgac 1084 0.0881652910042136 0 0 8 0 4 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 1085 0.0881652910042136 0 0 8 0 4 NM_020007 refGene chr3 62107591 + 85356 graph_last l 46 79 ttctttccgc 1086 0.0881652910042136 0 0 8 0 4 NM_176848 refGene chr4 146279317 + 99147 graph_last l 23 49 ttgctttact 1087 0.0881652910042136 0 0 8 0 4 NM_007656 refGene chr2 94035390 - 77042 graph_last l 13 21 tttctgtggg 1088 0.0881652910042136 0 0 8 0 4 NM_173363 refGene chr12 107110994 + 31339 graph_last 0 40 tttctttcgg 1089 0.0881652910042136 0 0 8 0 4 tttgcagatc 1090 0.0881652910042136 0.333333333333333 9 27 9 13 tttgctcttt 1091 0.0881652910042136 0.354838709677419 11 31 11 15 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 1092 0.0881652910042136 0 0 8 0 4 NM_008098 refGene chr6 35450366 - 111690 graph_last l 127 284 tacatccgaa 1093 0.091266698703953 2.625 42 16 44 8 ttctcctcag 1094 0.0913113160621817 0.371428571428571 13 35 14 17 atatgtcagg 1095 0.0938335331069448 0.304347826086957 7 23 7 11 NM_026552 refGene chr6 115149021 + 116125 graph_last l 33 73 ctcgctgtct 1096 0.0938335331069448 0.304347826086957 7 23 7 11 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 1097 0.0938335331069448 0.304347826086957 7 23 7 11 gtggctcata 1098 0.0945173197999332 0.41025641025641 16 39 17 19 gaaaaaaaaa 1099 0.097230669211617 1.94285714285714 68 35 71 17 gttgctgaga 1100 0.097230669211617 1.61428571428571 113 70 118 34 aaaaacaaaa 1101 0.0984214485010114 8.5 17 2 18 1 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 1102 0.0984214485010114 8.5 17 2 18 1 acccctgacc 1103 0.0984214485010114 8.5 17 2 18 1 NM_172755 refGene chr8 70418108 - 130912 graph_last l 23 73 ctagctaaat 1104 0.0984214485010114 8.5 17 2 18 1 gttctgacag 1105 0.0984214485010114 8.5 17 2 18 1 taaatgtcct 1106 0.0984214485010114 8.5 17 2 18 1 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 1107 0.0984214485010114 8.5 17 2 18 1 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 1108 0.0984214485010114 8.5 17 2 18 1 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 1109 0.100531290339216 2.4 48 20 50 10 NM_011965 refGene chr7 106188553 - 124434 graph_last l 74 158 gtctgcgtgc 1110 0.101560046771829 0.354838709677419 11 31 12 15 NM_133352 refGene chr19 41277237 - 69785 graph_last 18 66 aaacattggg 1111 0.103840893142001 Inf 11 0 12 0 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 1112 0.103840893142001 Inf 11 0 12 0 NM_130884 refGene chr2 130530736 + 79145 graph_last l 10 66 aatgataaaa 1113 0.103840893142001 Inf 11 0 12 0 aattcccttt 1114 0.103840893142001 Inf 11 0 12 0 acacttgcta 1115 0.103840893142001 Inf 11 0 12 0 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 1116 0.103840893142001 Inf 11 0 12 0 NM_146243 refGene chr11 19961420 - 18008 graph_last l 19 78 actgttaaaa 1117 0.103840893142001 Inf 11 0 12 0 agattattgt 1118 0.103840893142001 Inf 11 0 12 0 agctccccct 1119 0.103840893142001 Inf 11 0 12 0 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 1120 0.103840893142001 Inf 11 0 12 0 NM_183172 refGene chr10 87338202 + 14472 graph_last l 5 39 cgcatacata 1121 0.103840893142001 Inf 11 0 12 0 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 1122 0.103840893142001 Inf 11 0 12 0 ctgcctgaga 1123 0.103840893142001 Inf 11 0 12 0 gaaggaaaaa 1124 0.103840893142001 Inf 11 0 12 0 gacaaaggtg 1125 0.103840893142001 Inf 11 0 12 0 AK129454 knownGene chr11 23472540 - 18292 graph_last l 15 56 gacaggcatt 1126 0.103840893142001 Inf 11 0 12 0 NM_029758 refGene chr12 12633366 + 26326 graph_last l 10 44 gacataaaat 1127 0.103840893142001 Inf 11 0 12 0 gacgagatgg 1128 0.103840893142001 Inf 11 0 12 0 NM_172443 refGene chr11 118695990 - 25441 graph_last l 8 60 gattcctcac 1129 0.103840893142001 Inf 11 0 12 0 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 1130 0.103840893142001 Inf 11 0 12 0 NM_009338 refGene chr17 13147732 + 57147 graph_last l 4 60 gggattcggc 1131 0.103840893142001 Inf 11 0 12 0 BI105440 all_est chr9 21044926 - 135556 graph_last l 7 54 taccttttct 1132 0.103840893142001 Inf 11 0 12 0 NM_134086 refGene chr15 98552698 + 49712 graph_last l 16 84 tagcacacca 1133 0.103840893142001 Inf 11 0 12 0 tcagccatcg 1134 0.103840893142001 Inf 11 0 12 0 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 1135 0.103840893142001 Inf 11 0 12 0 tgagcatact 1136 0.103840893142001 Inf 11 0 12 0 NM_133954 refGene chr8 96605505 - 132575 graph_last l 3 36 tgctctagaa 1137 0.103840893142001 Inf 11 0 12 0 NM_008802 refGene chr3 19157145 - 83355 graph_last 1 28 tgtgaaggct 1138 0.103840893142001 Inf 11 0 12 0 tgtgcagatg 1139 0.103840893142001 Inf 11 0 12 0 ttaattcatt 1140 0.103840893142001 Inf 11 0 12 0 NM_178628 refGene chr12 65856222 - 28595 graph_last 5 39 ttagaagtga 1141 0.103840893142001 Inf 11 0 12 0 BM964406 all_est chr2 37842889 - 73820 graph_last l 9 47 ttgcatttct 1142 0.103840893142001 Inf 11 0 12 0 NM_175400 refGene chr2 4826964 + 71584 graph_last l 4 73 ttggaaccct 1143 0.103840893142001 Inf 11 0 12 0 tttcattgtt 1144 0.103840893142001 Inf 11 0 12 0 aataaaatta 1145 0.105029213283483 Inf 12 0 13 0 acaatgttcc 1146 0.105029213283483 Inf 12 0 13 0 NM_007438 refGene chr7_random 37879260 + 127284 graph_second 0 104 accctcctcc 1147 0.105029213283483 Inf 12 0 13 0 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 1148 0.105029213283483 Inf 12 0 13 0 agaagtgttt 1149 0.105029213283483 Inf 12 0 13 0 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 1150 0.105029213283483 Inf 12 0 13 0 NM_053092 refGene chr8 113687507 - 133540 graph_last 10 76 caactatggt 1151 0.105029213283483 Inf 12 0 13 0 NM_175255 refGene chr11 51417047 + 19792 graph_last l 4 67 caataaaaca 1152 0.105029213283483 Inf 12 0 13 0 NM_030210 refGene chr5 124411318 + 107069 graph_last l 7 58 cacacctgta 1153 0.105029213283483 Inf 12 0 13 0 NM_017477 refGene chr6 89337169 + 114740 graph_last l 17 80 cctgcaagga 1154 0.105029213283483 Inf 12 0 13 0 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 1155 0.105029213283483 Inf 12 0 13 0 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 1156 0.105029213283483 Inf 12 0 13 0 AI390780 all_est chr4 11907783 - 91323 graph_last l 39 92 gaaacctcta 1157 0.105029213283483 Inf 12 0 13 0 ggataaatgc 1158 0.105029213283483 Inf 12 0 13 0 ggatggcaat 1159 0.105029213283483 Inf 12 0 13 0 BG069541 all_est chr4 122403918 + 96951 graph_last 0 56 gtggttgaaa 1160 0.105029213283483 Inf 12 0 13 0 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 1161 0.105029213283483 Inf 12 0 13 0 NM_016804 refGene chr2 75270957 + 75844 graph_last l 24 67 tcctttgtac 1162 0.105029213283483 Inf 12 0 13 0 NM_009291 refGene chr9 60478782 - 138120 graph_last l 14 64 tccttttcta 1163 0.105029213283483 Inf 12 0 13 0 AF374267 knownGene chr15 83762102 + 48753 graph_last l 81 192 tgctggacgt 1164 0.105029213283483 0.4 14 35 15 17 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 1165 0.105029213283483 Inf 12 0 13 0 ttgtgtgttt 1166 0.105029213283483 Inf 12 0 13 0 NM_008973 refGene chr6 36810971 + 111736 graph_last l 17 84 tttcaatctt 1167 0.105029213283483 Inf 12 0 13 0 ttttatttgt 1168 0.105029213283483 Inf 12 0 13 0 tttttcccaa 1169 0.105029213283483 Inf 12 0 13 0 NM_023312 refGene chr8 70094469 - 130862 graph_last l 90 351 aaggatgtgc 1170 0.107652769627920 0.3 6 20 6 10 gaagccatcc 1171 0.107652769627920 0.3 6 20 6 10 NM_172522 refGene chr9 67081216 - 138600 graph_last l 51 70 tgtgggtaat 1172 0.107652769627920 0.3 6 20 6 10 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 1173 0.108112189816713 0.71859296482412 143 199 149 97 tagcagacag 1174 0.108148380092987 0.32 8 25 8 12 gggtcaaagg 1175 0.108505663381749 3.2 32 10 33 5 NM_007597 refGene chr11 49920151 - 19666 graph_last l 49 306 taacagttgt 1176 0.108505663381749 3.2 32 10 33 5 ccatattatg 1177 0.109127036667912 5 20 4 21 2 NM_009536 refGene chr11 75336854 + 21637 graph_last l 42 180 cctccatcct 1178 0.109127036667912 5 20 4 21 2 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 1179 0.109127036667912 5 20 4 21 2 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 1180 0.110074975817895 5.25 21 4 22 2 genomic chr14 28864622 + 0 unique_long l 31 227 attaacttgg 1181 0.110074975817895 5.25 21 4 22 2 ttatcactgt 1182 0.110074975817895 5.25 21 4 22 2 NM_029573 refGene chr9 56720855 + 137782 graph_last l 28 42 aacctagcct 1183 0.110108005416993 0.1 1 10 1 5 NM_177291 refGene chr14 45312259 + 41215 graph_last 0 22 acatcattaa 1184 0.110108005416993 0.1 1 10 1 5 NM_199195 refGene chr9 86880603 + 139962 graph_last l 22 37 actataaata 1185 0.110108005416993 0.1 1 10 1 5 actgagaatc 1186 0.110108005416993 0.1 1 10 1 5 NM_133937 refGene chr6 115376401 - 116150 graph_last l 11 16 agagctactg 1187 0.110108005416993 0.1 1 10 1 5 NM_024427 refGene chr9 69501760 - 138896 graph_last l 30 50 agatgtgttg 1188 0.110108005416993 0.1 1 10 1 5 NM_133772 refGene chr8 70864910 - 130960 graph_last l 25 42 agcgtgtgat 1189 0.110108005416993 0.1 1 10 1 5 caaaataaaa 1190 0.110108005416993 0.1 1 10 1 5 NM_008447 refGene chr10 130503339 + 16675 graph_last l 39 50 caacatttca 1191 0.110108005416993 0.1 1 10 1 5 NM_016698 refGene chr5 114295106 - 106212 graph_second 9 11 cagactttct 1192 0.110108005416993 0.1 1 10 1 5 BC050793 knownGene chr6 93906091 - 115091 graph_last l 26 39 cataaacaaa 1193 0.110108005416993 0.1 1 10 1 5 NM_023910 refGene chr5 136202212 + 107900 graph_last l 47 118 cccaactcca 1194 0.110108005416993 0.1 1 10 1 5 NM_019449 refGene chr19 3753078 + 67353 graph_last l 9 17 ctccacctgc 1195 0.110108005416993 0.1 1 10 1 5 ctcctaaccc 1196 0.110108005416993 0.1 1 10 1 5 ctttttatat 1197 0.110108005416993 0.1 1 10 1 5 NM_008394 refGene chr14 46737866 + 41399 graph_last l 8 16 gaccctaaac 1198 0.110108005416993 0.1 1 10 1 5 NM_008826 refGene chr10 80123703 - 13860 graph_last l 32 56 gcagactatg 1199 0.110108005416993 0.1 1 10 1 5 NM_007694 refGene chr2 132937343 - 79364 graph_last l 18 26 gcattagcat 1200 0.110108005416993 0.1 1 10 1 5 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 1201 0.110108005416993 3.5 28 8 29 4 gctctggcct 1202 0.110108005416993 0.1 1 10 1 5 ggaaaaattg 1203 0.110108005416993 0.1 1 10 1 5 NM_028207 refGene chr11 101635110 - 24017 graph_last l 59 118 ggaggtcctg 1204 0.110108005416993 0.1 1 10 1 5 NM_177561 refGene chr5_random 22663978 + 109446 graph_last l 43 79 ggccagagac 1205 0.110108005416993 0.1 1 10 1 5 NM_026442 refGene chr9 120451144 - 142017 graph_last l 12 20 gggcagttct 1206 0.110108005416993 0.1 1 10 1 5 NM_153058 refGene chr18 24445614 + 63347 graph_last l 55 195 gtaggatagc 1207 0.110108005416993 4 24 6 25 3 NM_024194 refGene chr3 162413184 - 90676 graph_last l 17 27 gttttttgcc 1208 0.110108005416993 0.1 1 10 1 5 NM_126165 refGene chr8 108577067 + 133146 graph_last l 42 86 taggacactt 1209 0.110108005416993 0.1 1 10 1 5 tatcatcttt 1210 0.110108005416993 0.1 1 10 1 5 tatttattca 1211 0.110108005416993 0.1 1 10 1 5 tattttacct 1212 0.110108005416993 0.1 1 10 1 5 NM_146087 refGene chr18 61710536 + 65292 graph_last l 12 22 tcaagataaa 1213 0.110108005416993 0.1 1 10 1 5 NM_021278 refGene chrX 155231101 - 152783 graph_second l 10 20 tctgacaaac 1214 0.110108005416993 0.1 1 10 1 5 tctgcttgga 1215 0.110108005416993 0.1 1 10 1 5 tgaaataatt 1216 0.110108005416993 0.1 1 10 1 5 NM_013494 refGene chr8 64448988 + 130583 graph_last l 26 60 tgacattgtc 1217 0.110108005416993 0.1 1 10 1 5 genomic chr11 69353030 + 0 unique_long l 30 64 tgacctggga 1218 0.110108005416993 0.1 1 10 1 5 NM_011883 refGene chr3 59223555 + 85206 graph_last l 45 73 tgcagaggaa 1219 0.110108005416993 0.1 1 10 1 5 tgcccaaaca 1220 0.110108005416993 0.1 1 10 1 5 NM_175189 refGene chr9 38162109 + 136509 graph_last l 15 34 tgcgctgggt 1221 0.110108005416993 0.1 1 10 1 5 BF472673 all_est chr4 151486628 - 99606 graph_last l 9 19 tgtggcttta 1222 0.110108005416993 0.1 1 10 1 5 tgttttcacc 1223 0.110108005416993 0.1 1 10 1 5 ttctgctttg 1224 0.110108005416993 0.1 1 10 1 5 NM_144791 refGene chr1 159512211 + 7462 graph_last 17 34 ttcttgtagc 1225 0.110108005416993 0.1 1 10 1 5 NM_178592 refGene chr17 34764204 + 58926 graph_last l 42 64 ttgctgttta 1226 0.110108005416993 0.1 1 10 1 5 ttgttttcct 1227 0.110108005416993 0.1 1 10 1 5 NM_016705 refGene chr15 92735530 - 49341 graph_second l 26 41 tttatttaag 1228 0.110108005416993 0.1 1 10 1 5 tacattttca 1229 0.112637822415158 2.5 40 16 42 8 ctcaataaat 1230 0.113165004998721 4.16666666666667 25 6 26 3 aacaaagtca 1231 0.113374603771357 0.214285714285714 3 14 3 7 NM_172704 refGene chr4 150094948 + 99503 graph_last l 26 71 agccctgcct 1232 0.113374603771357 0.214285714285714 3 14 3 7 aggttctgcc 1233 0.113374603771357 0.214285714285714 3 14 3 7 NM_019400 refGene chr11 70549148 - 21202 graph_last l 73 202 atgatggaca 1234 0.113374603771357 0.405405405405405 15 37 16 18 NM_018740 refGene chr11 69561848 + 21096 graph_last 25 61 cattataact 1235 0.113374603771357 0.214285714285714 3 14 3 7 ctcaatccca 1236 0.113374603771357 0.214285714285714 3 14 3 7 ggaagtacag 1237 0.113374603771357 0.214285714285714 3 14 3 7 NM_009635 refGene chr10 130294883 - 16641 graph_last l 31 63 ggtaaagtta 1238 0.113374603771357 0.214285714285714 3 14 3 7 NM_030225 refGene chr12 81127815 + 29823 graph_last l 26 69 gtaaaatgct 1239 0.113374603771357 0.214285714285714 3 14 3 7 BU522970 all_est chr11 98436544 + 23692 graph_last l 42 77 tatgttgttc 1240 0.113374603771357 0.214285714285714 3 14 3 7 genomic chr3 77282410 + 0 unique_long l 61 81 tgattatgtg 1241 0.113374603771357 0.214285714285714 3 14 3 7 NM_010091 refGene chr4 153972505 + 99821 graph_last l 49 88 tgccactgcc 1242 0.113374603771357 0.214285714285714 3 14 3 7 NM_145958 refGene chr6 57236523 - 113035 graph_last l 39 78 ttcaactgca 1243 0.113374603771357 0.214285714285714 3 14 3 7 NM_020050 refGene chr7 101779623 - 124151 graph_last l 61 95 ttctagaaca 1244 0.113374603771357 0.214285714285714 3 14 3 7 NM_025768 refGene chr8 13869653 + 128105 graph_last l 68 188 ttgatcccca 1245 0.113374603771357 0.214285714285714 3 14 3 7 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 1246 0.113374603771357 0.214285714285714 3 14 3 7 aataaatacc 1247 0.115047124043598 0.166666666666667 2 12 2 6 NM_011787 refGene chr8 95255746 - 132447 graph_last l 29 57 caatcatagg 1248 0.115047124043598 0.166666666666667 2 12 2 6 AA270490 all_est chr11 82981326 + 22365 graph_last l 56 182 cagggtctgg 1249 0.115047124043598 0.166666666666667 2 12 2 6 NM_025321 refGene chr1 174987404 - 8431 graph_last 0 72 ctttcaatcc 1250 0.115047124043598 0.166666666666667 2 12 2 6 AK082233 knownGene chr1 16742530 - 608 graph_last l 12 30 gaaagttttc 1251 0.115047124043598 0.166666666666667 2 12 2 6 gagagcagca 1252 0.115047124043598 0.166666666666667 2 12 2 6 NM_025471 refGene chr4 34824037 - 92197 graph_last l 23 35 gagtttctaa 1253 0.115047124043598 0.166666666666667 2 12 2 6 gctctgtgtc 1254 0.115047124043598 0.166666666666667 2 12 2 6 gctttataaa 1255 0.115047124043598 0.166666666666667 2 12 2 6 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 1256 0.115047124043598 0.166666666666667 2 12 2 6 NM_139061 refGene chr11 21220775 - 18135 graph_last l 43 83 gtgacagaat 1257 0.115047124043598 0.166666666666667 2 12 2 6 AK029707 knownGene chrX 125528359 - 151570 graph_last 23 61 ttaggcagct 1258 0.115047124043598 0.166666666666667 2 12 2 6 NM_182991 refGene chr8 70745352 - 130941 graph_last l 49 119 ttctgagtat 1259 0.115047124043598 0.166666666666667 2 12 2 6 NM_054040 refGene chr17 3019855 - 56519 graph_last l 34 54 ttcttgtcca 1260 0.115047124043598 0.166666666666667 2 12 2 6 NM_010511 refGene chr10 20361431 + 10738 graph_last l 12 31 ttggtggaag 1261 0.115047124043598 0.166666666666667 2 12 2 6 NM_053102 refGene chr3 148522611 + 90100 graph_last l 78 161 cccagctttc 1262 0.118966181654763 0.379310344827586 11 29 11 14 NM_010273 refGene chrX 63914437 - 149249 graph_last l 60 102 gggcagggta 1263 0.118966181654763 0.379310344827586 11 29 11 14 NM_023735 refGene chr1 128078440 - 5827 graph_last l 56 214 aagaaaaagt 1264 0.122495220511101 2.64285714285714 37 14 39 7 NM_019824 refGene chr5 121430049 + 106743 graph_last l 56 108 aacaagagtc 1265 0.127093738226588 0.393939393939394 13 33 14 16 X57780 knownGene chrM 6812 - 142531 graph_second 74 139 aagtcattct 1266 0.127093738226588 0.277777777777778 5 18 5 9 NM_020332 refGene chr15 28539718 + 45847 graph_last l 50 85 actagaaaat 1267 0.127093738226588 0.277777777777778 5 18 5 9 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 1268 0.127093738226588 0.463414634146341 19 41 20 20 gctatgcaaa 1269 0.127093738226588 0.277777777777778 5 18 5 9 ggaaaggcaa 1270 0.127093738226588 0.277777777777778 5 18 5 9 gggcggagct 1271 0.127093738226588 0.277777777777778 5 18 5 9 taaagtaata 1272 0.127093738226588 0.277777777777778 5 18 5 9 genomic chr10 95618767 + 0 unique_long l 44 105 tattaatatt 1273 0.127093738226588 0.277777777777778 5 18 5 9 NM_010687 refGene chr8 73318628 - 131206 graph_last l 84 153 tgaccagcga 1274 0.127093738226588 0.277777777777778 5 18 5 9 NM_134150 refGene chr19 7190511 - 67742 graph_last l 96 232 tggggtctca 1275 0.127093738226588 0.277777777777778 5 18 5 9 tgtgaccccc 1276 0.127093738226588 0.277777777777778 5 18 5 9 NM_017469 refGene chr3 83866801 - 86251 graph_last l 59 125 ttaattgtgt 1277 0.127093738226588 0.277777777777778 5 18 5 9 acaaataaac 1278 0.129766239116981 0.489361702127660 23 47 24 23 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 1279 0.130270001968325 0.578947368421053 44 76 46 37 BC057182 knownGene chr15_random 24001342 + 50897 graph_last l 6 129 tgatgtatat 1280 0.131611114613404 0.36 9 25 9 12 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 1281 0.131699808466209 2.83333333333333 34 12 35 6 NM_029402 refGene chr18 3435862 + 62399 graph_last l 29 108 atgttgctgc 1282 0.134510040293777 7.5 15 2 16 1 ccacactgtc 1283 0.134510040293777 7.5 15 2 16 1 NM_011319 refGene chr3 111565883 - 88313 graph_last l 50 188 gaggtcactg 1284 0.134510040293777 7.5 15 2 16 1 genomic chr10 64909820 + 0 unique_long l 8 46 gtgccaagga 1285 0.134510040293777 7.5 15 2 16 1 NM_015819 refGene chrX 42688995 - 148431 graph_last l 19 54 taaatcccac 1286 0.134510040293777 7.5 15 2 16 1 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 1287 0.134510040293777 2.38888888888889 43 18 45 9 tccaactcct 1288 0.134510040293777 7.5 15 2 16 1 NM_018798 refGene chrX 141794351 + 152260 graph_last l 66 192 tgatgtttgc 1289 0.134510040293777 7.5 15 2 16 1 NM_009466 refGene chr5 64716776 - 103290 graph_last 0 52 tgtagactgg 1290 0.134510040293777 7.5 15 2 16 1 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 1291 0.134510040293777 7.5 15 2 16 1 NM_173777 refGene chr9 21220572 - 135578 graph_last l 42 153 ttttctttcc 1292 0.134510040293777 7.5 15 2 16 1 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 1293 0.139929222779825 8 16 2 17 1 cagaaacagg 1294 0.139929222779825 8 16 2 17 1 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 1295 0.139929222779825 8 16 2 17 1 ggctgtcctg 1296 0.139929222779825 8 16 2 17 1 tgaggatgaa 1297 0.139929222779825 8 16 2 17 1 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 1298 0.139929222779825 8 16 2 17 1 NM_025816 refGene chr6 53234427 + 112812 graph_last l 22 165 accactgata 1299 0.140669716348031 3 30 10 31 5 ggaagatgct 1300 0.141967274590663 1.90322580645161 59 31 62 15 NM_010798 refGene chr10 78003266 - 13706 graph_last 129 474 aacgctgcca 1301 0.144527768550924 0.51063829787234 24 47 25 23 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 1302 0.146626740721153 0.379310344827586 11 29 12 14 NM_008385 refGene chr4 123806814 - 97069 graph_last l 64 157 ctttgggggc 1303 0.146626740721153 0.379310344827586 11 29 12 14 AI787975 all_est chr4 84452734 + 94672 graph_last 0 55 aaccagcaaa 1304 0.146639721476298 Inf 11 0 11 0 NM_011112 refGene chr12 101396152 + 30934 graph_last 24 79 actggagttt 1305 0.146639721476298 Inf 11 0 11 0 NM_007794 refGene chr8 107206516 + 132995 graph_last 1 27 agacctgtaa 1306 0.146639721476298 Inf 11 0 11 0 NM_009438 refGene chr7 38103328 - 120755 graph_last l 18 121 agctggggtt 1307 0.146639721476298 Inf 11 0 11 0 agtgtggaat 1308 0.146639721476298 Inf 11 0 11 0 genomic chr4 123480209 - 0 unique_long l 3 22 caaataaaag 1309 0.146639721476298 Inf 11 0 11 0 NM_008956 refGene chr10 82168653 - 14002 graph_last l 7 50 cacctcacca 1310 0.146639721476298 Inf 11 0 11 0 NM_199022 refGene chr2 125929378 + 78833 graph_last l 25 72 cattaaataa 1311 0.146639721476298 Inf 11 0 11 0 cccttcactg 1312 0.146639721476298 Inf 11 0 11 0 NM_026421 refGene chr5 99137796 - 105093 graph_last l 26 74 ccttggcctc 1313 0.146639721476298 Inf 11 0 11 0 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 1314 0.146639721476298 Inf 11 0 11 0 NM_199151 refGene chr9 72494658 + 139089 graph_last l 15 90 cgactctgtt 1315 0.146639721476298 Inf 11 0 11 0 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 1316 0.146639721476298 3.25 26 8 27 4 NM_026156 refGene chr8 3586476 + 127592 graph_last 2 35 ctgtgggggg 1317 0.146639721476298 Inf 11 0 11 0 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 1318 0.146639721476298 Inf 11 0 11 0 NM_008478 refGene chrX 63457577 - 149204 graph_last l 13 55 gaagacttga 1319 0.146639721476298 Inf 11 0 11 0 NM_021789 refGene chr9 46174510 - 137077 graph_last l 7 57 gacgtgaatg 1320 0.146639721476298 Inf 11 0 11 0 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 1321 0.146639721476298 Inf 11 0 11 0 gagtctccct 1322 0.146639721476298 4.75 19 4 20 2 gatgcgcttg 1323 0.146639721476298 4.75 19 4 20 2 NM_026708 refGene chr11 77752812 + 21919 graph_last 4 43 gctgactccg 1324 0.146639721476298 Inf 11 0 11 0 gcttctatgt 1325 0.146639721476298 Inf 11 0 11 0 AK129231 knownGene chr14 94761651 + 43740 graph_last l 13 42 gcttgtatac 1326 0.146639721476298 Inf 11 0 11 0 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 1327 0.146639721476298 Inf 11 0 11 0 ggagcactgg 1328 0.146639721476298 Inf 11 0 11 0 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 1329 0.146639721476298 3.25 26 8 27 4 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 1330 0.146639721476298 Inf 11 0 11 0 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 1331 0.146639721476298 Inf 11 0 11 0 gtcacaccac 1332 0.146639721476298 Inf 11 0 11 0 NM_008297 refGene chr10 59695541 + 12599 graph_last 0 13 gtggaaaatg 1333 0.146639721476298 Inf 11 0 11 0 NM_010607 refGene chr1 192870991 - 9533 graph_last l 5 47 gtgggatgta 1334 0.146639721476298 Inf 11 0 11 0 NM_007984 refGene chr5 141879799 + 108268 graph_last l 13 52 gtgttgaggg 1335 0.146639721476298 Inf 11 0 11 0 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 1336 0.146639721476298 4.75 19 4 20 2 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 1337 0.146639721476298 Inf 11 0 11 0 NM_023671 refGene chr7 89832761 + 123232 graph_last l 10 53 taccatcagc 1338 0.146639721476298 Inf 11 0 11 0 NM_198111 refGene chr12 48649939 + 27846 graph_last l 44 78 tagagaggtg 1339 0.146639721476298 Inf 11 0 11 0 tatctgtccc 1340 0.146639721476298 Inf 11 0 11 0 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 1341 0.146639721476298 Inf 11 0 11 0 NM_021535 refGene chr4 40784770 - 92391 graph_last l 12 70 tctgcgtcct 1342 0.146639721476298 Inf 11 0 11 0 NM_025985 refGene chr11 72257703 + 21283 graph_last l 5 25 tgatgggtgc 1343 0.146639721476298 Inf 11 0 11 0 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 1344 0.146639721476298 Inf 11 0 11 0 NM_025517 refGene chr3 119820895 - 88618 graph_last l 20 70 ttaagctcgt 1345 0.146639721476298 Inf 11 0 11 0 NM_010207 refGene chr7_random 27126424 - 127060 graph_last 0 21 ttcataaaaa 1346 0.146639721476298 Inf 11 0 11 0 NM_024212 refGene chr9 66553110 - 138568 graph_last 4 39 tttgatttat 1347 0.146639721476298 Inf 11 0 11 0 NM_013502 refGen