gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_PN1.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count COUNT_PN1.TAG.count tagatatagg 1 3.64599886240543e-28 0.132142857142857 37 280 47 97 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 2 1.75224540990036e-19 3.34666666666667 502 150 631 52 tgaccccggg 3 2.01600535127278e-18 6.95 278 40 349 14 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 4 5.29854389252865e-13 0.0256410256410256 2 78 2 27 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 5 7.83778438963987e-13 10.1176470588235 172 17 216 6 cctttaatcc 6 2.06498214722712e-10 0.386503067484663 126 326 159 113 tgtataaaaa 7 3.37276251226895e-10 0.204081632653061 30 147 38 51 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 8 5.2856706912495e-10 0.130841121495327 14 107 18 37 cccttcttct 9 6.8695360520743e-10 13.5555555555556 122 9 153 3 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 10 9.81969754009246e-10 0.0666666666666667 5 75 6 26 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 11 2.91808690862680e-09 0.0181818181818182 1 55 1 19 cgtctgtgga 12 4.16680251466385e-09 0.24 36 150 45 52 ggcaagcccc 13 8.20538302335219e-09 3.53125 226 64 284 22 gcccgggaat 14 9.46180352030492e-09 3.25333333333333 244 75 307 26 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 15 9.63594743835083e-09 0.0192307692307692 1 52 1 18 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 16 1.61751375192848e-08 0.206611570247934 25 121 31 42 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 17 3.14962986194917e-08 0.0757575757575758 5 66 6 23 agagcgaagt 18 5.08600732253147e-08 0.396153846153846 103 260 129 90 cgccgccggc 19 1.85821575352636e-07 3.04 228 75 287 26 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 20 1.41707212024969e-06 0.0727272727272727 4 55 5 19 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 21 1.97870746197527e-06 0.327044025157233 52 159 65 55 ggtgagcctg 22 2.54463376242055e-06 8 96 12 121 4 agcagcccct 23 4.19418253167298e-06 0 0 35 0 12 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 24 6.02796386819363e-06 0.28099173553719 34 121 43 42 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 25 7.91845004618098e-06 0.211111111111111 19 90 24 31 ctgcctgccc 26 9.64949288043383e-06 0.333333333333333 49 147 62 51 ttgggccaga 27 9.64949288043383e-06 0.308823529411765 42 136 53 47 tctggacgcg 28 1.03060781980383e-05 Inf 58 0 73 0 tctctctgtt 29 1.55395450249379e-05 0 0 32 0 11 agagtaatca 30 3.71593090388227e-05 0.166666666666667 11 66 14 23 tgtatgtctt 31 6.06055557062857e-05 0.127272727272727 7 55 9 19 tcaataaagc 32 9.30430681317978e-05 0.202898550724638 14 69 17 24 ttcaaagagt 33 0.000141126485377375 0.163934426229508 10 61 13 21 atcctggtaa 34 0.000175374588810699 0.134615384615385 7 52 9 18 ccttgctcaa 35 0.000191229271873750 0.222222222222222 16 72 20 25 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 36 0.000220810469099010 1.81683168316832 367 202 461 70 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 37 0.000277021241540763 5.92857142857143 83 14 104 5 AF063095 knownGene chr12 87316486 - 30295 graph_last 12 93 cagacctcaa 38 0.000281801524478419 0.130434782608696 6 46 7 16 gtgctgaata 39 0.000293704896518484 Inf 46 0 58 0 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 40 0.000312946098340723 7.88888888888889 71 9 89 3 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 41 0.000323005367493873 0.24 18 75 23 26 ttgactttat 42 0.000356616300046855 0.336363636363636 37 110 46 38 tatgtcacct 43 0.000403715394750029 0.1 4 40 5 14 tgggttgtct 44 0.000420434606476582 1.72294372294372 398 231 500 80 gaaaatgaga 45 0.000436151304340148 Inf 45 0 57 0 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 46 0.000497927746871081 0.0625 2 32 2 11 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 47 0.000501405478711528 0.39568345323741 55 139 69 48 aggaaggcgg 48 0.000667408647300084 2.53125 162 64 204 22 ggaagccact 49 0.000771455271980404 2.83673469387755 139 49 175 17 cactgttgag 50 0.000896150850727067 0.242424242424242 16 66 20 23 aaaaaaaaaa 51 0.00101146191147744 0.628235294117647 267 425 336 147 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 52 0.00118029188262419 0.38135593220339 45 118 57 41 atggggttgg 53 0.00139754530490929 0.0857142857142857 3 35 4 12 tactcattat 54 0.00151915940899357 0.183673469387755 9 49 11 17 gaacattgca 55 0.00156556461707917 0.0625 2 32 3 11 gtaagcaaaa 56 0.00224495025684852 3.65384615384615 95 26 120 9 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 57 0.00224495025684852 5.66666666666667 68 12 85 4 NM_008696 refGene chr1 40712852 - 1780 graph_last l 7 38 ctagaagcag 58 0.00262348906452866 0.131578947368421 5 38 6 13 ggcttcggtc 59 0.00263029548987903 1.81699346405229 278 153 350 53 NM_018871 refGene chr5 134736729 - 107744 graph_last l 168 546 aatgtgagtc 60 0.00282831537191561 0.321428571428571 27 84 34 29 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 61 0.00282831537191561 0.245901639344262 15 61 19 21 CF585278 all_est chr12 33782179 + 27240 graph_last 7 36 gagaaactga 62 0.00340426174532188 0 0 20 0 7 gcccccctct 63 0.00357067648380876 0.333333333333333 28 84 35 29 gtggctcaca 64 0.0038150812081359 1.29411764705882 1166 901 1466 312 gattccgtga 65 0.00385592781861934 2.09782608695652 193 92 243 32 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 66 0.00388298680125962 0.09375 3 32 4 11 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 67 0.00388298680125962 0.09375 3 32 4 11 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 68 0.00429963006174199 Inf 36 0 45 0 aagaggcaag 69 0.00477337994811914 3.69565217391304 85 23 107 8 gccaagtgga 70 0.00488104952550011 1.93805309734513 219 113 275 39 aacaatttgg 71 0.00490676482284451 2.37704918032787 145 61 182 21 agactatgca 72 0.00490676482284451 0.0769230769230769 2 26 2 9 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 73 0.00497098432743249 3.27586206896552 95 29 119 10 attttcagtt 74 0.00585785627934938 14 42 3 53 1 tagagactgc 75 0.00585785627934938 14 42 3 53 1 gtctgctgat 76 0.00616266621342547 2.65217391304348 122 46 153 16 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 77 0.00634905281255926 0.142857142857143 5 35 6 12 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 78 0.00647479011525032 0.175 7 40 9 14 tgcccagtgc 79 0.00739916282640405 0.25 13 52 16 18 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 80 0.00793693851158859 0.254545454545455 14 55 18 19 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 81 0.00856092057683759 3.30769230769231 86 26 108 9 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 82 0.0110804911162962 0.333333333333333 24 72 30 25 ctccctcagg 83 0.0115495756481122 0 0 17 0 6 NM_016843 refGene chr15 87130916 + 49033 graph_last l 13 32 tgaacggggc 84 0.0115495756481122 0 0 17 0 6 NM_026775 refGene chr12 81330718 - 29849 graph_last l 12 58 tgggatttat 85 0.0115495756481122 0 0 17 0 6 tggatcagtc 86 0.0118554042195072 2.06172839506173 167 81 210 28 aaaacagtgg 87 0.0127492671993687 0.482014388489209 67 139 84 48 cccacaagct 88 0.0131327770916228 Inf 31 0 39 0 aatttcccct 89 0.0132069537096082 0.232558139534884 10 43 12 15 cgctggttcc 90 0.0133735923431913 2.58139534883721 111 43 140 15 NM_026769 refGene chr7 131959952 - 125952 graph_last l 32 121 cacactgcct 91 0.0148009499938714 0.0869565217391304 2 23 2 8 tttattgact 92 0.0149633019324529 0.05 1 20 1 7 taattttttt 93 0.0155420078609903 0.184210526315789 7 38 9 13 aaatcctttc 94 0.0171968900720686 0.328125 21 64 26 22 tatttgcaaa 95 0.0171968900720686 12.6666666666667 38 3 48 1 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 96 0.0174402742569789 7.5 45 6 56 2 ggatggggag 97 0.0184763688615613 3.6 72 20 90 7 aagaaaaaaa 98 0.0185221334615941 Inf 29 0 37 0 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 99 0.0185221334615941 Inf 29 0 37 0 gccttccaat 100 0.0188729052387372 2.84375 91 32 114 11 caaaaaaaaa 101 0.0193527215717621 Inf 30 0 38 0 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 102 0.0198936899702875 0.232558139534884 10 43 13 15 ttttattttg 103 0.0210135146821654 0.137931034482759 4 29 5 10 cagaacccac 104 0.0231137435148416 3.88235294117647 66 17 83 6 tagggcaatc 105 0.0242992318418839 3.55 71 20 89 7 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 106 0.0247996052505582 0.310344827586207 18 58 23 20 NM_017367 refGene chr5 94551679 - 104851 graph_last 131 360 tactgctgat 107 0.0247996052505582 7.33333333333333 44 6 55 2 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 108 0.0269924632165949 0.115384615384615 3 26 4 9 gcttttgtta 109 0.0269924632165949 0.115384615384615 3 26 4 9 genomic chr10 95618767 + 0 unique_long l 44 105 tattaatatt 110 0.0269924632165949 0.115384615384615 3 26 4 9 NM_009389 refGene chr9 63768355 + 138375 graph_last b 8 40 tcgtcgtgcc 111 0.0269924632165949 0.115384615384615 3 26 4 9 aagagtcttt 112 0.0280534721376103 0.1875 6 32 7 11 ttctgggtag 113 0.0280534721376103 0.1875 6 32 7 11 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 114 0.034830698841472 0.0869565217391304 2 23 3 8 NM_018799 refGene chr4 128521019 + 97495 graph_last l 28 66 tctatctcag 115 0.034830698841472 0.0869565217391304 2 23 3 8 BC059845 all_mrna chr4_random 163545 + 99872 graph_last 59 175 agggccactg 116 0.0363438071411935 0.307692307692308 16 52 20 18 NM_025282 refGene chr13 81768319 + 36483 graph_last l 3 17 atcacattat 117 0.0363438071411935 0 0 14 0 5 ccttctgcct 118 0.0363438071411935 0 0 14 0 5 genomic chr19_random 15495638 + 0 unique_long l 1 7 gaggggcaag 119 0.0363438071411935 0 0 14 0 5 NM_146072 refGene chr16 89234221 - 55766 graph_last 2 10 gatagaggga 120 0.0363438071411935 0 0 14 0 5 NM_008060 refGene chr19 9056013 + 67898 graph_last l 3 11 gcagtgtact 121 0.0363438071411935 0 0 14 0 5 ggggttttat 122 0.0363438071411935 0 0 14 0 5 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 123 0.0363438071411935 0 0 14 0 5 NM_008113 refGene chr17 25793383 - 57991 graph_last l 42 84 tctgccagga 124 0.0363438071411935 0 0 14 0 5 tggattcatt 125 0.0363438071411935 0 0 14 0 5 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 126 0.0363438071411935 0 0 14 0 5 NM_026203 refGene chr10 21915572 + 10852 graph_last l 26 102 accctgctgt 127 0.0366893137679877 0.172413793103448 5 29 6 10 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 128 0.0374203898923080 Inf 27 0 34 0 NM_007636 refGene chr10 120033751 - 16078 graph_last l 83 199 ggtctaattt 129 0.0374203898923080 Inf 27 0 34 0 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 130 0.0375524291061444 2.6875 86 32 108 11 NM_007883 refGene chr18 20972896 + 63182 graph_last 140 717 aattcgcgga 131 0.0377805474167446 0.1 2 20 2 7 NM_024186 refGene chr13 89915066 + 36756 graph_last l 2 19 catccggtca 132 0.0377805474167446 0.1 2 20 2 7 ccagtcctgg 133 0.0377805474167446 0.359375 23 64 29 22 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 134 0.0377805474167446 0.1 2 20 2 7 NM_008634 refGene chr13 97869372 + 37324 graph_last 0 16 atcaggagtg 135 0.0410998568003807 0.0588235294117647 1 17 1 6 genomic chr9 69502315 - 0 unique_long l 14 46 tccagaaaat 136 0.0410998568003807 0.0588235294117647 1 17 1 6 tcttctcaca 137 0.0410998568003807 0.428571428571429 36 84 45 29 ttggctgccc 138 0.0410998568003807 2.475 99 40 124 14 NM_011634 refGene chr9 110584487 + 141318 graph_last l 146 323 cctgtgggtc 139 0.0436576809227878 0.1875 6 32 8 11 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 140 0.0484875278409522 0.153846153846154 4 26 5 9 gccaagggtc 141 0.0495859259373758 2.75862068965517 80 29 101 10 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 142 0.0500291431423319 2.88461538461538 75 26 94 9 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 143 0.0509649552040424 Inf 25 0 31 0 gaggctcaca 144 0.0509649552040424 Inf 25 0 31 0 gtggcacaca 145 0.0509649552040424 Inf 25 0 31 0 acagtgggga 146 0.0517493941138923 Inf 25 0 32 0 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 147 0.0517493941138923 Inf 25 0 32 0 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 148 0.0570032821210077 0.346153846153846 18 52 22 18 gtgaaactaa 149 0.0573225345476951 1.92307692307692 150 78 189 27 NM_008065 refGene chr16 86134860 + 55647 graph_last 65 333 aattagttgt 150 0.0593895078096131 0.362068965517241 21 58 26 20 NM_016698 refGene chr5 114291683 - 106212 graph_last l 30 80 aaattggaca 151 0.0605004939888603 0.206896551724138 6 29 7 10 NM_025482 refGene chr2 181400858 + 82485 graph_last l 34 183 cctctgtttg 152 0.0615731649769994 0.326530612244898 16 49 20 17 NM_010267 refGene chr1 17332941 + 648 graph_last l 33 76 cagagtgtct 153 0.0637412227175806 0.130434782608696 3 23 4 8 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 154 0.070551667970143 0.21875 7 32 9 11 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 155 0.0714427474814598 0.345454545454545 19 55 24 19 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 156 0.0728645600225704 0.390625 25 64 31 22 atggctcaca 157 0.076465675571687 Inf 24 0 30 0 NM_010925 refGene chr10 80555240 - 13897 graph_last l 9 108 acctgcatct 158 0.0797266416773295 0.263157894736842 10 38 13 13 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 159 0.081271525700767 6.16666666666667 37 6 46 2 tgaaataaac 160 0.081271525700767 6.16666666666667 37 6 46 2 NM_029570 refGene chr3 36808028 + 84223 graph_last l 7 37 cttcaacctg 161 0.082439363156183 0.1 2 20 3 7 CA316586 all_est chr6 30663917 + 111294 graph_last l 20 85 gactcagtgg 162 0.082439363156183 0.1 2 20 3 7 AK030708 knownGene chr10 86847504 - 14428 graph_last l 5 42 tacccttgcc 163 0.082439363156183 0.1 2 20 3 7 tgttaagaag 164 0.082439363156183 0.1 2 20 3 7 NM_017469 refGene chr3 83866801 - 86251 graph_last l 59 125 ttaattgtgt 165 0.082439363156183 0.1 2 20 3 7 NM_175162 refGene chr8 47049163 - 129791 graph_last 25 63 ttgtatatgt 166 0.082439363156183 0.1 2 20 3 7 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 167 0.0887780772567743 10.3333333333333 31 3 39 1 NM_008634 refGene chr13 97870964 + 37324 graph_last 20 91 acttcaatat 168 0.097623094529712 0.206896551724138 6 29 8 10 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 169 0.097623094529712 0.206896551724138 6 29 8 10 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 170 0.097623094529712 0.206896551724138 6 29 8 10 ggatttggct 171 0.0977101885922696 1.63779527559055 208 127 262 44 NM_009197 refGene chrX 93603418 - 150551 graph_last 2 14 aaacacagga 172 0.0995526157737136 0 0 12 0 4 aaattggagg 173 0.0995526157737136 0.117647058823529 2 17 2 6 aaccgcgaat 174 0.0995526157737136 0 0 12 0 4 NM_053207 refGene chr8 126716435 - 134382 graph_second 6 13 aagtacagcc 175 0.0995526157737136 0 0 12 0 4 NM_023122 refGene chrX 154411423 - 152747 graph_last l 2 8 aatatacata 176 0.0995526157737136 0 0 12 0 4 acacagaaac 177 0.0995526157737136 0.173913043478261 4 23 5 8 AI839905 all_est chrX 145838622 - 152391 graph_last l 12 31 acagtgcatt 178 0.0995526157737136 0 0 12 0 4 CA316586 all_est chr6 30663632 + 111294 graph_last l 19 56 agaggagctg 179 0.0995526157737136 0.117647058823529 2 17 2 6 NM_025740 refGene chr11 29119939 - 18514 graph_last l 19 106 atgagtctgt 180 0.0995526157737136 0.173913043478261 4 23 5 8 cgcaacttgg 181 0.0995526157737136 0 0 12 0 4 NM_175012 refGene chr18 66101013 + 65570 graph_last b 6 16 cgcggctcgg 182 0.0995526157737136 0 0 12 0 4 ctagtctttg 183 0.0995526157737136 0.669260700389105 172 257 216 89 NM_008745 refGene chr13 58919793 + 35397 graph_last l 24 60 ctgaagcccg 184 0.0995526157737136 0.117647058823529 2 17 2 6 NM_031404 refGene chr5 135974053 + 107867 graph_last l 15 82 gaacgcaagt 185 0.0995526157737136 0.25 8 32 10 11 NM_010311 refGene chr10 77157835 + 13630 graph_last l 10 32 gaactccccg 186 0.0995526157737136 0 0 12 0 4 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 187 0.0995526157737136 0.173913043478261 4 23 5 8 genomic chr5 134694843 + 0 unique_long l 5 12 gcaagaatag 188 0.0995526157737136 0 0 12 0 4 NM_025363 refGene chr6 38635518 + 111893 graph_last l 23 88 gcaagggtga 189 0.0995526157737136 0.117647058823529 2 17 2 6 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 190 0.0995526157737136 0 0 12 0 4 NM_018763 refGene chr9 97829313 - 140418 graph_last l 27 73 gccgtgctgg 191 0.0995526157737136 0 0 12 0 4 genomic chr8 55036394 - 0 unique_long l 4 11 gctacctttc 192 0.0995526157737136 0 0 12 0 4 gctccctcat 193 0.0995526157737136 0 0 12 0 4 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 194 0.0995526157737136 Inf 21 0 27 0 NM_026481 refGene chr8 106976878 - 132961 graph_last l 26 72 gctgactctt 195 0.0995526157737136 0 0 12 0 4 gcttttattt 196 0.0995526157737136 0 0 12 0 4 gggtaggggt 197 0.0995526157737136 0.173913043478261 4 23 5 8 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 198 0.0995526157737136 0.117647058823529 2 17 2 6 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 199 0.0995526157737136 0 0 12 0 4 taatatttaa 200 0.0995526157737136 0 0 12 0 4 NM_020252 refGene chr17 90850761 - 62103 graph_last l 25 76 taatgtgttg 201 0.0995526157737136 0.117647058823529 2 17 2 6 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 202 0.0995526157737136 0.117647058823529 2 17 2 6 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 203 0.0995526157737136 3 60 20 76 7 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 204 0.0995526157737136 0 0 12 0 4 NM_028207 refGene chr11 101637639 - 24017 graph_second 0 9 tccgtgggtg 205 0.0995526157737136 0 0 12 0 4 tctgctaaag 206 0.0995526157737136 6 36 6 45 2 AK085367 knownGene chr8 119157008 - 133821 graph_last l 14 28 tcttagttct 207 0.0995526157737136 0 0 12 0 4 NM_012010 refGene chrX 83950642 + 149980 graph_last 1 7 tgaaagtggt 208 0.0995526157737136 0 0 12 0 4 NM_173419 refGene chr14 53435335 - 41872 graph_last l 6 13 tgattttgag 209 0.0995526157737136 0 0 12 0 4 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 210 0.0995526157737136 6 36 6 45 2 ttatttttag 211 0.0995526157737136 0 0 12 0 4 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 212 0.0995526157737136 0 0 12 0 4 NM_145614 refGene chr9 52671516 - 137570 graph_last l 5 37 ttttcagtgt 213 0.0995526157737136 0 0 12 0 4 NM_018815 refGene chr6 92559047 + 114978 graph_last 0 8 agaaggaggg 214 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 215 0.0997099890863117 9.66666666666667 29 3 36 1 cacagctctg 216 0.0997099890863117 0.0714285714285714 1 14 1 5 ctgcagcggc 217 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_153566 refGene chr4 123811833 + 97083 graph_last l 12 28 ctggatacta 218 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_011670 refGene chr5_random 2620508 + 109059 graph_last 5 44 ctgggccgtg 219 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_022997 refGene chr8 86197927 + 131907 graph_last l 4 20 gacattagat 220 0.0997099890863117 0.0714285714285714 1 14 1 5 gaggagggtg 221 0.0997099890863117 9.66666666666667 29 3 36 1 NM_019686 refGene chr9 56661323 - 137777 graph_last l 8 24 gtatcactta 222 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 223 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_153545 refGene chr11 120276827 + 25607 graph_last l 50 74 tcccaggaaa 224 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_133791 refGene chr8 47689575 - 129872 graph_last l 3 19 tgcccggtgt 225 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_175153 refGene chr9 67378684 + 138630 graph_last 1 19 tttttaaatg 226 0.0997099890863117 0.0714285714285714 1 14 1 5 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 227 0.1105465893108 0.230769230769231 6 26 7 9 NM_007874 refGene chr18 34562364 - 63762 graph_last l 6 73 ctagggacag 228 0.1105465893108 0.230769230769231 6 26 7 9 gaaactaggt 229 0.1105465893108 0.230769230769231 6 26 7 9 AK080973 knownGene chr4 74397681 - 94336 graph_last l 26 94 gagtctcttc 230 0.1105465893108 0.230769230769231 6 26 7 9 NM_145385 refGene chr6 126864632 + 116927 graph_last l 150 428 gtcctataag 231 0.112101801811682 0.325 13 40 16 14 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 232 0.114030728121876 2.78260869565217 64 23 80 8 atactgaagc 233 0.116571369826735 0.528846153846154 55 104 69 36 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 234 0.119378357211825 0.695501730103806 201 289 253 100 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 235 0.120024164674226 2.31428571428571 81 35 102 12 NM_009308 refGene chr18 31774468 + 63593 graph_last l 12 50 gaacctgtgg 236 0.120045326223691 0.241379310344828 7 29 9 10 cggttgctgg 237 0.123089132316445 5.5 33 6 42 2 aaaaaattga 238 0.123426262060480 0.285714285714286 10 35 13 12 ctgagcaaca 239 0.123426262060480 Inf 21 0 26 0 gcctgtggtg 240 0.123426262060480 0.413793103448276 24 58 30 20 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 241 0.123426262060480 5.66666666666667 34 6 43 2 NM_010487 refGene chr9 22639791 - 135759 graph_last l 26 97 ggatggctta 242 0.123426262060480 Inf 21 0 26 0 NM_011889 refGene chr15 83848784 + 48775 graph_last 10 98 gtgtacatac 243 0.123426262060480 0.285714285714286 10 35 13 12 ttatgaaatg 244 0.123426262060480 0.285714285714286 10 35 13 12 cctgaatgac 245 0.124151797034912 0.15 3 20 4 7 CA316586 all_est chr6 30666721 + 111294 graph_last l 30 123 tacttacaag 246 0.124151797034912 0.15 3 20 4 7 NM_025548 refGene chr7 24142854 - 119914 graph_last 20 67 tatgtaggac 247 0.124151797034912 0.15 3 20 4 7 acatcataga 248 0.126353216663393 0.466666666666667 35 75 44 26 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 249 0.133124752719311 9 27 3 34 1 NM_011520 refGene chr4 129500658 + 97598 graph_last b 57 223 ggcgctcgta 250 0.133124752719311 0.289473684210526 11 38 14 13 ccccagccag 251 0.140293052233320 1.66346153846154 173 104 217 36 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 252 0.142245057164555 1.18139534883721 1270 1075 1596 372 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 253 0.145672229474242 0.4 22 55 28 19 NM_026023 refGene chr11 40360087 + 19152 graph_last 2 83 gaaaaatatt 254 0.152926546187033 0.217391304347826 5 23 6 8 NM_023122 refGene chrX 154409033 + 152747 graph_last l 28 172 gttggctcct 255 0.152926546187033 0.217391304347826 5 23 6 8 gtagtggaag 256 0.156100250038174 0.315789473684211 12 38 15 13 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 257 0.156100250038174 0.315789473684211 12 38 15 13 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 258 0.159454370574972 0.511111111111111 46 90 58 31 NM_025974 refGene chr9 122956983 + 142184 graph_last l 115 326 aaggcaaaga 259 0.166992291086859 0.418181818181818 23 55 29 19 gtggctcata 260 0.166992291086859 5.33333333333333 32 6 40 2 tcctgaaata 261 0.166992291086859 0.230769230769231 6 26 8 9 tcttctaatc 262 0.166992291086859 0.230769230769231 6 26 8 9 gaaaatatcc 263 0.168829474256123 5.5 33 6 41 2 NM_007422 refGene chr1 181698653 - 8873 graph_last l 15 50 ccctcatccc 264 0.16966791363393 0.117647058823529 2 17 3 6 NM_013876 refGene chr4 108313676 - 96057 graph_last l 24 76 tttaaattgt 265 0.16966791363393 0.117647058823529 2 17 3 6 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 266 0.16966791363393 0.117647058823529 2 17 3 6 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 267 0.171514836174094 0.275862068965517 8 29 10 10 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 268 0.176406269328818 Inf 19 0 24 0 gtgactcaca 269 0.176406269328818 Inf 19 0 24 0 gtgccatatt 270 0.176406269328818 Inf 19 0 24 0 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 271 0.176406269328818 Inf 19 0 24 0 AK032343 all_mrna chr7 71977154 + 122340 graph_last l 31 156 caggctgata 272 0.186205314688633 8.33333333333333 25 3 32 1 gcccaggctc 273 0.186205314688633 8.33333333333333 25 3 32 1 NM_021273 refGene chr12 107236798 - 31356 graph_last 21 68 ccggcccaga 274 0.188670297782904 Inf 20 0 25 0 ggcctgaggc 275 0.188670297782904 Inf 20 0 25 0 ggctgctctg 276 0.188670297782904 Inf 20 0 25 0 gtagctcaca 277 0.188670297782904 Inf 20 0 25 0 acgctgaata 278 0.189616058106004 8.66666666666667 26 3 33 1 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 279 0.19534561198123 2.28125 73 32 92 11 NM_130863 refGene chr19_random 15495020 - 71388 graph_last l 31 106 accccttgtg 280 0.212508123863746 0.2 4 20 5 7 gcagggtggg 281 0.212508123863746 2.37931034482759 69 29 87 10 tatatacata 282 0.212508123863746 0.2 4 20 5 7 NM_011241 refGene chr15 83217970 - 48702 graph_last 71 146 ttgggcctac 283 0.212508123863746 0.2 4 20 5 7 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 284 0.219319589209897 0.314285714285714 11 35 14 12 BC009091 knownGene chr19_random 7285586 - 71199 graph_last 1 5 aaaaagactc 285 0.219746058023548 0 0 9 0 3 aaaaagggtt 286 0.219746058023548 0 0 9 0 3 genomic chr11 68662887 - 0 unique_long l 4 14 aaaactgggg 287 0.219746058023548 0.0833333333333333 1 12 1 4 aaataaaaca 288 0.219746058023548 0.142857142857143 2 14 2 5 BX514180 all_est chr10 44079063 - 11989 graph_last 0 3 aaatttaaag 289 0.219746058023548 0 0 9 0 3 AK122236 knownGene chr12 108304804 + 31448 graph_last 8 42 aaatttgttc 290 0.219746058023548 0 0 9 0 3 aacccagagc 291 0.219746058023548 0 0 9 0 3 aagagaaacc 292 0.219746058023548 0.176470588235294 3 17 4 6 genomic chr5 135975983 + 0 unique_long l 2 6 aaggcaagta 293 0.219746058023548 0 0 9 0 3 aatataagag 294 0.219746058023548 0.0833333333333333 1 12 1 4 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 295 0.219746058023548 0 0 9 0 3 aatttcttgg 296 0.219746058023548 0 0 9 0 3 acaacaataa 297 0.219746058023548 0 0 9 0 3 acacaataaa 298 0.219746058023548 0.0833333333333333 1 12 1 4 NM_013540 refGene chr3 82528196 - 86190 graph_last l 7 21 acactttctt 299 0.219746058023548 0.176470588235294 3 17 4 6 NM_009898 refGene chr7_random 46673618 + 127457 graph_last 17 51 acagtgccta 300 0.219746058023548 0.176470588235294 3 17 4 6 acagtgcctg 301 0.219746058023548 8.33333333333333 25 3 31 1 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 302 0.219746058023548 8.33333333333333 25 3 31 1 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 303 0.219746058023548 0.342857142857143 12 35 15 12 NM_025542 refGene chr2 172905536 + 81856 graph_last l 10 54 acctttgtac 304 0.219746058023548 0.176470588235294 3 17 4 6 NM_009030 refGene chr4 128222925 - 97446 graph_last 68 191 actaactgtg 305 0.219746058023548 Inf 18 0 23 0 actataacca 306 0.219746058023548 0 0 9 0 3 NM_144846 refGene chr15 65243265 - 47497 graph_last l 13 52 agaaaagtat 307 0.219746058023548 0.142857142857143 2 14 2 5 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 308 0.219746058023548 0.368421052631579 14 38 17 13 NM_011650 refGene chr1 120849495 - 5532 graph_last l 16 72 agcattggcg 309 0.219746058023548 Inf 18 0 22 0 NM_019699 refGene chr19 9946997 - 67959 graph_last l 31 182 agccaagaga 310 0.219746058023548 0.368421052631579 14 38 17 13 agcttgcctt 311 0.219746058023548 0 0 9 0 3 NM_025804 refGene chr8 125253642 + 134250 graph_last 2 24 aggggcctag 312 0.219746058023548 0.0833333333333333 1 12 1 4 AI854083 all_est chr6 36936378 - 111753 graph_last l 2 10 ataagcttga 313 0.219746058023548 0 0 9 0 3 ataatggata 314 0.219746058023548 4 36 9 45 3 ataggcaaaa 315 0.219746058023548 0.0833333333333333 1 12 1 4 NM_027878 refGene chr10 90782898 + 14647 graph_last l 7 24 atctcagtag 316 0.219746058023548 0.0833333333333333 1 12 1 4 atgagaatgg 317 0.219746058023548 0.0833333333333333 1 12 1 4 AU255304 all_est chr7 54329684 - 121521 graph_last l 4 14 atgtactctt 318 0.219746058023548 0 0 9 0 3 atgtctctgt 319 0.219746058023548 0.0833333333333333 1 12 1 4 AK038042 knownGene chr11 115842027 - 25204 graph_last l 10 62 attcttaaaa 320 0.219746058023548 0.0833333333333333 1 12 1 4 attgagaaca 321 0.219746058023548 0 0 9 0 3 NM_173439 refGene chr16 31943821 - 52908 graph_last l 5 21 attgctgtat 322 0.219746058023548 0 0 9 0 3 genomic chr4 153978639 - 0 unique_long l 3 7 attgggtata 323 0.219746058023548 0 0 9 0 3 NM_011522 refGene chr17 24278928 - 57816 graph_last l 31 63 attgtgtatt 324 0.219746058023548 0.0833333333333333 1 12 1 4 NM_145553 refGene chr4 131785171 + 97804 graph_last 0 20 atttaaaaaa 325 0.219746058023548 0 0 9 0 3 NM_022410 refGene chr15 79105966 + 48274 graph_last l 8 30 atttgactgg 326 0.219746058023548 0.0833333333333333 1 12 1 4 NM_178119 refGene chr1 91822089 + 4551 graph_last l 4 21 attttacgtt 327 0.219746058023548 0 0 9 0 3 atttttcttt 328 0.219746058023548 0.310344827586207 9 29 11 10 caaaacatac 329 0.219746058023548 0 0 9 0 3 NM_026211 refGene chr13 55372901 + 35178 graph_last l 17 61 caaacgacta 330 0.219746058023548 0.0833333333333333 1 12 1 4 AY255603 knownGene chr9 109276396 - 141189 graph_last l 7 21 caaaggtgct 331 0.219746058023548 0 0 9 0 3 caattcttta 332 0.219746058023548 0.0833333333333333 1 12 1 4 cactcctaag 333 0.219746058023548 0 0 9 0 3 NM_025382 refGene chr4 133683735 - 98024 graph_last l 3 24 cactgcttcc 334 0.219746058023548 0.0833333333333333 1 12 1 4 cactttactt 335 0.219746058023548 0.142857142857143 2 14 2 5 cagaccctac 336 0.219746058023548 0.0833333333333333 1 12 1 4 cagcatcacc 337 0.219746058023548 2.25 72 32 90 11 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 338 0.219746058023548 0.142857142857143 2 14 2 5 genomic chr12 95770479 - 0 unique_long l 21 70 caggattcct 339 0.219746058023548 0.142857142857143 2 14 2 5 caggcccttg 340 0.219746058023548 0.142857142857143 2 14 2 5 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 341 0.219746058023548 0 0 9 0 3 NM_010864 refGene chr9 77758330 + 139524 graph_last l 8 16 catatattca 342 0.219746058023548 0 0 9 0 3 catccacaag 343 0.219746058023548 0 0 9 0 3 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 344 0.219746058023548 0.260869565217391 6 23 7 8 NM_177581 refGene chr5_random 18880823 + 109360 graph_last l 3 10 cattaacctt 345 0.219746058023548 0 0 9 0 3 ccaagggtcc 346 0.219746058023548 0.142857142857143 2 14 2 5 NM_019978 refGene chr3 56887987 + 85071 graph_last l 4 11 ccaagttggc 347 0.219746058023548 0.0833333333333333 1 12 1 4 NM_177751 refGene chrX 145856339 - 152396 graph_last l 18 32 ccaggcttta 348 0.219746058023548 0 0 9 0 3 genomic chr2 131320194 - 0 unique_long l 14 62 ccatcagtgg 349 0.219746058023548 0.176470588235294 3 17 4 6 cccacaaagg 350 0.219746058023548 0 0 9 0 3 cccacaaggt 351 0.219746058023548 2.60869565217391 60 23 75 8 NM_145556 refGene chr4 146738309 + 99182 graph_last 0 5 cccctggaaa 352 0.219746058023548 0 0 9 0 3 genomic chr7 52539336 + 0 unique_long l 4 15 ccgcttggac 353 0.219746058023548 0 0 9 0 3 cctcactgga 354 0.219746058023548 0 0 9 0 3 cctcctccag 355 0.219746058023548 0.368421052631579 14 38 17 13 cctgtctccc 356 0.219746058023548 0 0 9 0 3 ccttgaaata 357 0.219746058023548 0.3125 10 32 13 11 NM_020009 refGene chr4 146670510 + 99166 graph_last l 13 33 cggggccaca 358 0.219746058023548 0 0 9 0 3 NM_011791 refGene chr8 24662200 - 128728 graph_last 0 14 ctcagacagc 359 0.219746058023548 0 0 9 0 3 ctgccccaca 360 0.219746058023548 Inf 18 0 23 0 ctgttaatac 361 0.219746058023548 0.0833333333333333 1 12 1 4 AA073739 all_est chr19 8897935 + 67877 graph_last l 10 47 gaagccagcc 362 0.219746058023548 0 0 9 0 3 NM_133348 refGene chr4 150384877 + 99558 graph_last l 102 304 gacaccagag 363 0.219746058023548 0.310344827586207 9 29 11 10 gactctggct 364 0.219746058023548 0 0 9 0 3 NM_029555 refGene chr6 42357963 + 112149 graph_second 0 12 gagcaaccag 365 0.219746058023548 0 0 9 0 3 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 366 0.219746058023548 Inf 18 0 22 0 NM_016863 refGene chr12 4873131 - 26045 graph_last l 4 18 gagggacttg 367 0.219746058023548 0 0 9 0 3 gagtttagag 368 0.219746058023548 0 0 9 0 3 gatgaacccc 369 0.219746058023548 0 0 9 0 3 NM_009746 refGene chr7 119758378 - 125247 graph_last 1 8 gatttcgtat 370 0.219746058023548 0.0833333333333333 1 12 1 4 gcaatctgat 371 0.219746058023548 2.88235294117647 49 17 62 6 NM_028659 refGene chr3 93044981 - 86956 graph_last 239 561 gcctcctccc 372 0.219746058023548 2.60869565217391 60 23 75 8 NM_153413 refGene chr9 109513400 + 141212 graph_last 2 11 gcctgagcac 373 0.219746058023548 0 0 9 0 3 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 374 0.219746058023548 Inf 18 0 23 0 AA896727 all_est chr3 54020885 + 84913 graph_last 1 31 gctccaagga 375 0.219746058023548 0 0 9 0 3 gctgggaggt 376 0.219746058023548 0 0 9 0 3 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 377 0.219746058023548 0.0833333333333333 1 12 1 4 ggaggtgtct 378 0.219746058023548 0 0 9 0 3 ggctgcagcc 379 0.219746058023548 3.33333333333333 40 12 50 4 NM_007999 refGene chr19 10130399 + 67962 graph_last 30 134 ggctttggag 380 0.219746058023548 8 24 3 30 1 NM_008729 refGene chr15 31786949 - 46004 graph_last l 24 59 gtcactcaac 381 0.219746058023548 0.176470588235294 3 17 4 6 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 382 0.219746058023548 0 0 9 0 3 NM_028950 refGene chr2 14998028 - 72176 graph_last 0 6 gtgaagtcag 383 0.219746058023548 0 0 9 0 3 gtgacagttt 384 0.219746058023548 0 0 9 0 3 gtgacctggc 385 0.219746058023548 0.0833333333333333 1 12 1 4 NM_153166 refGene chr17 28788461 - 58335 graph_last l 11 32 gtgatagtga 386 0.219746058023548 0 0 9 0 3 NM_026222 refGene chr3 34770123 + 84139 graph_last 1 26 gtgattttcc 387 0.219746058023548 0.142857142857143 2 14 2 5 NM_145596 refGene chr8 70109811 + 130866 graph_last 0 5 gtggcacact 388 0.219746058023548 0 0 9 0 3 gtggcttaca 389 0.219746058023548 Inf 18 0 23 0 AI838513 all_est chr1 137208174 - 6402 graph_last l 8 29 gtgtggccct 390 0.219746058023548 0.0833333333333333 1 12 1 4 gtttcaagag 391 0.219746058023548 0.176470588235294 3 17 4 6 NM_010698 refGene chr5 43614163 + 102391 graph_last l 19 63 taaagacaca 392 0.219746058023548 0.176470588235294 3 17 4 6 taaataaaga 393 0.219746058023548 0.176470588235294 3 17 4 6 taaattggat 394 0.219746058023548 0 0 9 0 3 NM_144811 refGene chr15 81177041 + 48470 graph_last 0 7 taataaagaa 395 0.219746058023548 0 0 9 0 3 NM_019406 refGene chr2 31298595 - 73309 graph_last l 58 96 taattaaatg 396 0.219746058023548 0 0 9 0 3 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 397 0.219746058023548 0.0833333333333333 1 12 1 4 NM_010017 refGene chr9 110841045 - 141352 graph_last l 21 70 tagagaggag 398 0.219746058023548 0.142857142857143 2 14 2 5 NM_025402 refGene chr11 120775513 + 25666 graph_last l 37 68 tagagcttta 399 0.219746058023548 0 0 9 0 3 NM_010837 refGene chr7 90820373 - 123299 graph_last l 2 16 tagtgctccc 400 0.219746058023548 0.142857142857143 2 14 2 5 tatacctgta 401 0.219746058023548 0 0 9 0 3 NM_007458 refGene chr7 37839274 - 120756 graph_second l 21 44 tatctcttct 402 0.219746058023548 0 0 9 0 3 NM_010022 refGene chr3 119882053 + 88622 graph_last l 11 18 tatctgtata 403 0.219746058023548 0 0 9 0 3 NM_011130 refGene chr8 21492512 - 128541 graph_last 2 9 tatgaatgtg 404 0.219746058023548 0.0833333333333333 1 12 1 4 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 405 0.219746058023548 0 0 9 0 3 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 406 0.219746058023548 0.176470588235294 3 17 4 6 tccgtgggtt 407 0.219746058023548 0 0 9 0 3 NM_011785 refGene chr1 180948039 + 8786 graph_last 0 3 tctaccttta 408 0.219746058023548 0 0 9 0 3 tctatttaca 409 0.219746058023548 0 0 9 0 3 NM_026700 refGene chr16 95363360 + 56182 graph_last l 11 31 tctcccttaa 410 0.219746058023548 0 0 9 0 3 tctgcttgga 411 0.219746058023548 0.0833333333333333 1 12 1 4 NM_178060 refGene chr11 98352551 + 23676 graph_last l 413 1055 tctgtagccc 412 0.219746058023548 0.633802816901408 90 142 113 49 NM_028475 refGene chr3 92414398 - 86875 graph_last l 4 13 tctgtcccat 413 0.219746058023548 0 0 9 0 3 tctttctttt 414 0.219746058023548 0.0833333333333333 1 12 1 4 AK034177 knownGene chr6 139815698 - 117726 graph_last l 12 24 tgaacaactt 415 0.219746058023548 0.0833333333333333 1 12 1 4 NM_198033 refGene chr2 29451283 + 73116 graph_last l 4 22 tgaataatct 416 0.219746058023548 0.0833333333333333 1 12 1 4 genomic chr1 184526032 - 0 unique_long l 6 82 tgaccttcct 417 0.219746058023548 0 0 9 0 3 NM_011627 refGene chr9 88576767 + 140001 graph_last 0 6 tgagtgcagc 418 0.219746058023548 0 0 9 0 3 NM_172787 refGene chr10 27146708 - 11123 graph_last l 6 32 tgatatgaat 419 0.219746058023548 0.0833333333333333 1 12 1 4 tgcaagaccc 420 0.219746058023548 0 0 9 0 3 BE952224 all_est chr4 124070462 + 97121 graph_last l 9 21 tggataattt 421 0.219746058023548 0 0 9 0 3 tgggctcctc 422 0.219746058023548 0 0 9 0 3 NM_029541 refGene chrX 124607824 + 151527 graph_last 4 30 tgtaacttac 423 0.219746058023548 0.0833333333333333 1 12 1 4 AK052736 knownGene chr8 79829375 + 131489 graph_second 0 32 tgtactgtat 424 0.219746058023548 0.142857142857143 2 14 2 5 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 425 0.219746058023548 0.0833333333333333 1 12 1 4 NM_011026 refGene chr5 121977418 + 106813 graph_second 2 10 tgtgtaatcc 426 0.219746058023548 0.0833333333333333 1 12 1 4 tgtgttgaga 427 0.219746058023548 Inf 18 0 22 0 AK012697 knownGene chr5 122772560 - 106898 graph_last l 9 27 ttaatcagga 428 0.219746058023548 0 0 9 0 3 ttacagaaat 429 0.219746058023548 0.176470588235294 3 17 4 6 NM_152804 refGene chr13 109184589 + 38028 graph_last l 10 45 ttagagaagt 430 0.219746058023548 0 0 9 0 3 NM_138587 refGene chr6 22172879 - 110818 graph_last l 5 13 ttatggcagt 431 0.219746058023548 0 0 9 0 3 ttatgggaat 432 0.219746058023548 0 0 9 0 3 NM_182991 refGene chr8 70745352 - 130941 graph_last l 49 119 ttctgagtat 433 0.219746058023548 0.0833333333333333 1 12 1 4 NM_173780 refGene chrX 141691790 + 152251 graph_last 1 7 ttctgtctga 434 0.219746058023548 0 0 9 0 3 ttctttctaa 435 0.219746058023548 0.0833333333333333 1 12 1 4 BE993913 all_est chrX 84016517 - 149990 graph_second 1 1 ttgaatagat 436 0.219746058023548 0 0 9 0 3 NM_025556 refGene chr8 14593612 - 128179 graph_last l 25 66 ttgttgtggt 437 0.219746058023548 0 0 9 0 3 tttaacaaaa 438 0.219746058023548 0 0 9 0 3 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 439 0.219746058023548 0.0833333333333333 1 12 1 4 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 440 0.219746058023548 0.260869565217391 6 23 7 8 tttagtttta 441 0.219746058023548 0 0 9 0 3 tttataaaat 442 0.219746058023548 0 0 9 0 3 NM_016759 refGene chr11 102067093 - 24069 graph_last l 37 69 tttgttatag 443 0.219746058023548 0 0 9 0 3 NM_025942 refGene chr2 73487585 - 75725 graph_last l 38 80 ttttacagta 444 0.219746058023548 0.176470588235294 3 17 4 6 BC034283 knownGene chr13 92446699 - 36949 graph_last l 19 55 ttttcagtgg 445 0.219746058023548 0.0833333333333333 1 12 1 4 ttttctattt 446 0.219746058023548 0.0833333333333333 1 12 1 4 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 447 0.219746058023548 0.0833333333333333 1 12 1 4 NM_177466 refGene chr6 86719540 - 114494 graph_last l 16 60 ttttgagcac 448 0.219746058023548 0.0833333333333333 1 12 1 4 ttttatgttt 449 0.228630862266611 0.625 85 136 107 47 tcctcttccc 450 0.229009570344912 0.4 16 40 20 14 aggccaagaa 451 0.231873541677789 0.25 5 20 6 7 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 452 0.231873541677789 0.25 5 20 6 7 NM_134044 refGene chr12 83476305 - 30013 graph_last l 8 58 cctacactcc 453 0.231873541677789 0.25 5 20 6 7 gcctatccaa 454 0.231873541677789 0.25 5 20 6 7 NM_009861 refGene chr4 136101390 - 98237 graph_last l 29 75 tatctgctta 455 0.231873541677789 0.25 5 20 6 7 NM_009320 refGene chr6 93295433 + 115017 graph_last l 16 47 tattttgtgg 456 0.231873541677789 0.25 5 20 6 7 NM_008112 refGene chr13 3314926 + 32298 graph_last l 80 154 ttttgtttat 457 0.231873541677789 0.25 5 20 6 7 gactgtgcca 458 0.232773572753563 3.77777777777778 34 9 43 3 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 459 0.232773572753563 3.77777777777778 34 9 43 3 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 460 0.236139405637909 0.307692307692308 8 26 10 9 tgggttgtgg 461 0.236139405637909 0.307692307692308 8 26 10 9 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 462 0.236139405637909 0.307692307692308 8 26 10 9 NM_009782 refGene chr1 157842554 - 7363 graph_last l 34 121 ttggtcaggt 463 0.236139405637909 0.307692307692308 8 26 10 9 aatacttttg 464 0.236478057211405 0.260869565217391 6 23 8 8 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 465 0.236478057211405 0.260869565217391 6 23 8 8 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 466 0.236478057211405 0.260869565217391 6 23 8 8 gcagccccta 467 0.236478057211405 0.260869565217391 6 23 8 8 aggtcgggtg 468 0.243513558235641 1.6 152 95 191 33 agaaggaggt 469 0.248065105861577 0.714285714285714 165 231 207 80 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 470 0.252213068247215 7.33333333333333 22 3 28 1 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 471 0.252213068247215 7.33333333333333 22 3 28 1 agagttcaga 472 0.255899891459388 Inf 16 0 20 0 NM_175488 refGene chr10 95970030 - 14952 graph_last 27 87 cagcttgcaa 473 0.255899891459388 Inf 16 0 20 0 gtcgcaggca 474 0.255899891459388 Inf 16 0 20 0 gaagcaaaga 475 0.257336846723970 7.66666666666667 23 3 29 1 NM_019410 refGene chr3 59231425 - 85210 graph_last l 161 357 aagcgtgcag 476 0.261102768422313 0.425 17 40 21 14 AK005167 knownGene chr7 24244951 + 119924 graph_last l 55 397 actcctgtcc 477 0.270688578943 0.536231884057971 37 69 46 24 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 478 0.270688578943 Inf 17 0 21 0 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 479 0.270688578943 Inf 17 0 21 0 gtggcgcaca 480 0.270688578943 Inf 17 0 21 0 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 481 0.277917365209402 0.368421052631579 14 38 18 13 AK085367 knownGene chr8 119156583 + 133821 graph_last l 39 190 cttcggttgt 482 0.277917365209402 0.368421052631579 14 38 18 13 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 483 0.287048392227427 0.142857142857143 2 14 3 5 NM_177681 refGene chr5 142074881 + 108282 graph_last 0 15 acgacagaag 484 0.287048392227427 0.142857142857143 2 14 3 5 NM_133926 refGene chr6 115093840 - 116120 graph_last 0 36 agaggggttg 485 0.287048392227427 0.142857142857143 2 14 3 5 NM_199022 refGene chr2 125929378 + 78833 graph_last l 25 72 cattaaataa 486 0.287048392227427 0.142857142857143 2 14 3 5 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 487 0.287048392227427 0.142857142857143 2 14 3 5 NM_010828 refGene chr10 18446012 + 10611 graph_last s 1 20 cccgcctcgg 488 0.287048392227427 0.142857142857143 2 14 3 5 gacagtaata 489 0.287048392227427 0.142857142857143 2 14 3 5 gccaaggcct 490 0.287048392227427 0.142857142857143 2 14 3 5 gttgtgattt 491 0.287048392227427 4.5 27 6 34 2 NM_016703 refGene chr5 29292420 - 101545 graph_last l 15 40 tgaagatgcc 492 0.287048392227427 0.142857142857143 2 14 3 5 tgttatgaga 493 0.287048392227427 0.142857142857143 2 14 3 5 ttcattctta 494 0.287048392227427 0.142857142857143 2 14 3 5 NM_008500 refGene chr2 36354993 - 73731 graph_last l 6 28 ttgtgctttg 495 0.287048392227427 0.142857142857143 2 14 3 5 genomic chr17 26602950 + 0 unique_long l 61 112 tttaataaac 496 0.287048392227427 0.142857142857143 2 14 3 5 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 497 0.290860000706562 4.66666666666667 28 6 35 2 NM_019802 refGene chr6 73476551 - 113867 graph_last 4 80 aaacgaaagt 498 0.303332151582859 0.344827586206897 10 29 12 10 gtcacaccac 499 0.303332151582859 0.344827586206897 10 29 12 10 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 500 0.309000831652484 0.394736842105263 15 38 19 13 AK045826 knownGene chr19 6624527 + 67692 graph_last l 87 261 ggctccctgc 501 0.310619199048303 0.375 12 32 15 11 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 502 0.310619199048303 3.08333333333333 37 12 47 4 tctacaagaa 503 0.321862851690059 0.589473684210526 56 95 71 33 aagaaaatag 504 0.324469695211019 0.555555555555556 40 72 50 25 aagaatgtag 505 0.324469695211019 0.235294117647059 4 17 5 6 AK003177 knownGene chr3 134325739 + 89348 graph_last 15 60 cagatttagg 506 0.324469695211019 0.235294117647059 4 17 5 6 NM_008538 refGene chr10 38262715 + 11621 graph_last 0 25 ctggcttctt 507 0.324469695211019 0.235294117647059 4 17 5 6 gattgatgca 508 0.324469695211019 0.235294117647059 4 17 5 6 NM_178703 refGene chr6 116077681 + 116195 graph_last l 76 354 tacgtttcta 509 0.324469695211019 0.235294117647059 4 17 5 6 NM_011352 refGene chr9 60247794 + 138104 graph_last l 7 42 tcctaactta 510 0.324469695211019 0.235294117647059 4 17 5 6 tctgtaattg 511 0.324469695211019 0.235294117647059 4 17 5 6 tgctgagatc 512 0.324469695211019 0.235294117647059 4 17 5 6 tgggtgtccc 513 0.324469695211019 0.235294117647059 4 17 5 6 gaataataaa 514 0.324860363136284 0.682352941176471 116 170 146 59 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 515 0.324860363136284 2.0625 66 32 83 11 atacttgaca 516 0.329994225434236 0.3 6 20 7 7 NM_010411 refGene chr18 38054458 - 64117 graph_last l 53 97 caaggtgaac 517 0.329994225434236 0.3 6 20 7 7 NM_146243 refGene chr11 19961775 + 18008 graph_last 22 71 cacacagact 518 0.329994225434236 0.3 6 20 7 7 NM_019831 refGene chrX 91306980 - 150325 graph_last l 22 69 cccacccttg 519 0.329994225434236 0.3 6 20 7 7 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 520 0.329994225434236 0.3 6 20 7 7 NM_009030 refGene chr4 128222930 + 97446 graph_last l 13 60 gagagtaaca 521 0.329994225434236 0.3 6 20 7 7 gctcctccct 522 0.329994225434236 0.3 6 20 7 7 taaaatttgt 523 0.329994225434236 0.3 6 20 7 7 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 524 0.329994225434236 0.441860465116279 19 43 24 15 NM_011112 refGene chr12 101396152 + 30934 graph_last 24 79 actggagttt 525 0.344760097525621 7 21 3 26 1 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 526 0.352969703535045 7 21 3 27 1 NM_028871 refGene chr4 135120062 + 98142 graph_last 23 100 taagatttca 527 0.354345068732578 0.344827586206897 10 29 13 10 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 528 0.361441116118378 Inf 14 0 18 0 BC048668 knownGene chr16 38124538 + 53459 graph_last l 43 170 agggcactgg 529 0.361441116118378 Inf 14 0 18 0 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 530 0.361441116118378 Inf 14 0 18 0 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 531 0.361441116118378 Inf 14 0 18 0 BC052699 knownGene chr6 126842836 + 116923 graph_last l 9 54 ccgacgcccc 532 0.361441116118378 Inf 14 0 18 0 cctttaatct 533 0.361441116118378 Inf 14 0 18 0 gggcggagct 534 0.361441116118378 Inf 14 0 18 0 gtcatagctg 535 0.361441116118378 Inf 14 0 18 0 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 536 0.361441116118378 Inf 14 0 18 0 ctgcatcgtt 537 0.373480503590301 0.489795918367347 24 49 30 17 aaacccttaa 538 0.381034072149345 0.166666666666667 2 12 2 4 NM_025808 refGene chr16 17130765 + 51924 graph_last l 20 55 aaacggtaag 539 0.381034072149345 0.166666666666667 2 12 2 4 NM_026729 refGene chr11 114916501 + 25076 graph_last l 7 62 aatcactggc 540 0.381034072149345 0.166666666666667 2 12 2 4 NM_013635 refGene chr12 27668053 + 26961 graph_last l 32 64 acaaagtgtc 541 0.381034072149345 0.166666666666667 2 12 2 4 NM_153595 refGene chr10 89036907 + 14566 graph_last 19 42 acaagatttt 542 0.381034072149345 0.166666666666667 2 12 2 4 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 543 0.381034072149345 0.166666666666667 2 12 2 4 actctagcca 544 0.381034072149345 0.166666666666667 2 12 2 4 NM_011406 refGene chr17 82092536 - 61525 graph_last l 4 18 agccagaagc 545 0.381034072149345 0.166666666666667 2 12 2 4 atcttcctcc 546 0.381034072149345 0.166666666666667 2 12 2 4 BY238464 all_est chr2 118967939 + 78313 graph_last l 9 29 ccgagcgagg 547 0.381034072149345 0.166666666666667 2 12 2 4 NM_010710 refGene chr2 38632312 + 73906 graph_last l 8 51 cgcacctcct 548 0.381034072149345 Inf 15 0 19 0 ctcaataaat 549 0.381034072149345 0.166666666666667 2 12 2 4 ctggagctag 550 0.381034072149345 0.166666666666667 2 12 2 4 AK013794 all_mrna chr7 73721823 + 122515 graph_last 2 13 cttaaacaaa 551 0.381034072149345 0.166666666666667 2 12 2 4 AK090227 all_mrna chrX 132132840 - 151845 graph_last 2 10 gagattagtc 552 0.381034072149345 0.166666666666667 2 12 2 4 NM_008989 refGene chr18 36470200 + 63957 graph_last l 10 43 gatctcaagg 553 0.381034072149345 0.166666666666667 2 12 2 4 gccaaaccaa 554 0.381034072149345 4.16666666666667 25 6 32 2 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 555 0.381034072149345 0.166666666666667 2 12 2 4 NM_025388 refGene chr1 174972698 - 8448 graph_last 53 122 gccctggggc 556 0.381034072149345 0.166666666666667 2 12 2 4 gctctgtgtc 557 0.381034072149345 0.166666666666667 2 12 2 4 genomic chr13 81769209 - 0 unique_long l 7 14 gcttagggta 558 0.381034072149345 0.166666666666667 2 12 2 4 ggcaaaaagc 559 0.381034072149345 0.166666666666667 2 12 2 4 gggaaactaa 560 0.381034072149345 0.166666666666667 2 12 2 4 NM_146019 refGene chr11 68914658 - 21006 graph_last l 49 176 gggaaccccc 561 0.381034072149345 4.16666666666667 25 6 32 2 ggtggctcac 562 0.381034072149345 0.166666666666667 2 12 2 4 NM_153550 refGene chr16 35427449 + 53240 graph_second 0 15 ggttctcagt 563 0.381034072149345 0.166666666666667 2 12 2 4 gtgctcagtg 564 0.381034072149345 0.166666666666667 2 12 2 4 NM_028835 refGene chr6 116487900 - 116215 graph_last l 3 25 gtttgcctga 565 0.381034072149345 0.166666666666667 2 12 2 4 NM_175212 refGene chr15 59927760 + 47233 graph_last l 39 85 taaactgggt 566 0.381034072149345 0.166666666666667 2 12 2 4 NM_025303 refGene chr1 16611261 - 594 graph_last 7 28 tacaatcaga 567 0.381034072149345 0.166666666666667 2 12 2 4 NM_018871 refGene chr5 134737023 + 107744 graph_last l 30 57 tcactatagc 568 0.381034072149345 0.166666666666667 2 12 2 4 genomic chr16 44061816 - 0 unique_long l 142 249 tctacacagt 569 0.381034072149345 0.166666666666667 2 12 2 4 BC049852 knownGene chr7 15939737 + 119234 graph_last l 4 21 tgggcagcag 570 0.381034072149345 0.166666666666667 2 12 2 4 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 571 0.381034072149345 2.92857142857143 41 14 51 5 NM_008139 refGene chr19 16285368 + 68305 graph_last l 46 89 tgttactctc 572 0.381034072149345 0.166666666666667 2 12 2 4 NM_146200 refGene chr7 118690565 - 125113 graph_last l 7 25 ttacaacaag 573 0.381034072149345 0.166666666666667 2 12 2 4 ttgacaaact 574 0.381034072149345 0.166666666666667 2 12 2 4 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 575 0.38272936235776 3 36 12 45 4 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 576 0.383804429270233 0.5 29 58 37 20 tctaccccat 577 0.392718494689638 0.45 18 40 22 14 NM_023871 refGene chr2 30346412 - 73215 graph_last 18 64 attcaaatcc 578 0.408569703648995 0.379310344827586 11 29 14 10 NM_021539 refGene chr5 116409924 + 106398 graph_last l 42 141 ggatgtaccc 579 0.408569703648995 0.346153846153846 9 26 11 9 taatagctag 580 0.408569703648995 0.517241379310345 30 58 38 20 NM_009238 refGene chr13 28839679 - 33570 graph_last l 6 39 tccctgggca 581 0.408569703648995 0.346153846153846 9 26 11 9 gtgggcgtgt 582 0.410495952383265 1.58974358974359 124 78 156 27 aaggtggaag 583 0.426061198018739 1.70689655172414 99 58 124 20 NM_017368 refGene chr2 91631056 + 76800 graph_last l 6 28 aaacatacac 584 0.440609748780013 0.214285714285714 3 14 4 5 NM_017472 refGene chr10 44143976 + 11990 graph_last l 45 113 aaagattaat 585 0.440609748780013 0.214285714285714 3 14 4 5 NM_008503 refGene chr17 24316262 - 57823 graph_last l 47 117 aacatcatcc 586 0.440609748780013 0.214285714285714 3 14 4 5 NM_153775 refGene chr8 124327700 + 134129 graph_last l 11 49 aagcaggaag 587 0.440609748780013 0.214285714285714 3 14 4 5 aggaaatgag 588 0.440609748780013 0.214285714285714 3 14 4 5 atctgacgcc 589 0.440609748780013 0.214285714285714 3 14 4 5 atgataatgg 590 0.440609748780013 0.214285714285714 3 14 4 5 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 591 0.440609748780013 0.3 6 20 8 7 AK009092 knownGene chr5 99751450 - 105140 graph_last 29 80 gccgtgtgct 592 0.440609748780013 0.214285714285714 3 14 4 5 gcctagaact 593 0.440609748780013 0.214285714285714 3 14 4 5 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 594 0.440609748780013 0.3 6 20 8 7 AK014046 knownGene chr11 62096350 - 20634 graph_last l 16 62 tctctgaggt 595 0.440609748780013 0.3 6 20 8 7 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 596 0.440609748780013 0.214285714285714 3 14 4 5 NM_011512 refGene chr2 27182459 - 72967 graph_last l 46 114 tgaagtaagg 597 0.440609748780013 0.214285714285714 3 14 4 5 NM_145465 refGene chr14 114360138 + 44472 graph_last l 5 24 tgggaacctt 598 0.440609748780013 0.214285714285714 3 14 4 5 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 599 0.440609748780013 0.214285714285714 3 14 4 5 genomic chr6 42782014 - 0 unique_long l 17 52 ttgaaagtgc 600 0.440609748780013 0.214285714285714 3 14 4 5 NM_030680 refGene chr10_random 137448 - 17001 graph_last 12 52 ttttattggt 601 0.440609748780013 0.214285714285714 3 14 4 5 NM_025848 refGene chr9 52633577 - 137561 graph_last l 30 85 aagctcgaaa 602 0.445280626546675 0.294117647058824 5 17 6 6 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 603 0.445280626546675 0.294117647058824 5 17 6 6 NM_146243 refGene chr11 19961420 - 18008 graph_last l 19 78 actgttaaaa 604 0.445280626546675 0.294117647058824 5 17 6 6 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 605 0.445280626546675 0.294117647058824 5 17 6 6 cagacggaag 606 0.445280626546675 0.294117647058824 5 17 6 6 ctgctgtacc 607 0.445280626546675 0.294117647058824 5 17 6 6 NM_153581 refGene chr8 55141142 + 130191 graph_last l 32 101 gaaataacta 608 0.445280626546675 0.294117647058824 5 17 6 6 NM_146083 refGene chr17 80910008 - 61430 graph_last l 15 47 ggccaaagag 609 0.445280626546675 0.294117647058824 5 17 6 6 AK052734 knownGene chr11 72496802 + 21327 graph_last l 10 30 gtgatcagca 610 0.445280626546675 0.294117647058824 5 17 6 6 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 611 0.445280626546675 0.294117647058824 5 17 6 6 NM_022424 refGene chr5 29632580 - 101589 graph_last l 17 61 tcacctgcat 612 0.445280626546675 0.294117647058824 5 17 6 6 NM_053075 refGene chr5 22955215 - 101155 graph_last l 54 151 ttacactact 613 0.445280626546675 0.294117647058824 5 17 6 6 attacggtgg 614 0.445286954850205 0.519230769230769 27 52 34 18 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 615 0.445286954850205 6.33333333333333 19 3 24 1 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 616 0.445286954850205 0.428571428571429 15 35 19 12 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 617 0.445286954850205 6.33333333333333 19 3 24 1 tgaaaccgcg 618 0.445286954850205 6.33333333333333 19 3 24 1 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 619 0.446357814957581 Inf 14 0 17 0 AV342873 all_est chr1 163471941 - 7703 graph_last l 4 23 aaaggatggg 620 0.446357814957581 0.111111111111111 1 9 1 3 aaataacaat 621 0.446357814957581 0.111111111111111 1 9 1 3 NM_145563 refGene chr5 108982037 - 105766 graph_last 3 20 aaatgtgcac 622 0.446357814957581 0.111111111111111 1 9 1 3 NM_009003 refGene chr8 125631605 + 134301 graph_last l 8 35 aacgtgagcg 623 0.446357814957581 0.111111111111111 1 9 1 3 aaggactgat 624 0.446357814957581 0.111111111111111 1 9 1 3 NM_026887 refGene chrX 151955962 + 152652 graph_last 3 23 aatgttcctt 625 0.446357814957581 0.111111111111111 1 9 1 3 AF133818 knownGene chr3 161696867 + 90649 graph_last 0 50 aatttaagtg 626 0.446357814957581 0.111111111111111 1 9 1 3 NM_019411 refGene chr11 51747475 + 19812 graph_last l 93 195 actgtagatg 627 0.446357814957581 0.384615384615385 10 26 12 9 genomic chr17 28803936 - 0 unique_long l 9 26 acttcattgg 628 0.446357814957581 0.111111111111111 1 9 1 3 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 629 0.446357814957581 0.111111111111111 1 9 1 3 agctcttgta 630 0.446357814957581 0.111111111111111 1 9 1 3 aggaaactta 631 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 632 0.446357814957581 Inf 13 0 16 0 NM_019442 refGene chr17 34484621 - 58888 graph_last 9 28 aggagccaat 633 0.446357814957581 0.111111111111111 1 9 1 3 aggcagacag 634 0.446357814957581 1.23809523809524 468 378 588 131 aggtgctgag 635 0.446357814957581 Inf 14 0 17 0 aggttggccg 636 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr12 60347856 + 0 unique_long l 4 24 agtggggtct 637 0.446357814957581 0.111111111111111 1 9 1 3 NM_013507 refGene chr7 102994114 - 124245 graph_last l 92 225 ataactgagt 638 0.446357814957581 3.22222222222222 29 9 36 3 ataattctac 639 0.446357814957581 0.111111111111111 1 9 1 3 atagaggcaa 640 0.446357814957581 4 24 6 30 2 atcggttcca 641 0.446357814957581 Inf 14 0 17 0 BC046438 knownGene chr13 71509181 + 36073 graph_last l 9 20 atgatgtgca 642 0.446357814957581 0.111111111111111 1 9 1 3 atgtactcgg 643 0.446357814957581 Inf 13 0 16 0 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 644 0.446357814957581 0.111111111111111 1 9 1 3 caaatgaggc 645 0.446357814957581 0.111111111111111 1 9 1 3 caagaccctg 646 0.446357814957581 0.111111111111111 1 9 1 3 caagtcttcc 647 0.446357814957581 0.384615384615385 10 26 12 9 NM_015753 refGene chr2 45292287 - 74261 graph_last l 13 58 cacgtgcctg 648 0.446357814957581 Inf 13 0 16 0 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 649 0.446357814957581 6.66666666666667 20 3 25 1 NM_026213 refGene chr15 5250696 - 45004 graph_last l 21 53 cagatgtatg 650 0.446357814957581 0.111111111111111 1 9 1 3 NM_080638 refGene chr7 119108898 + 125151 graph_last l 13 39 cagcattcag 651 0.446357814957581 0.111111111111111 1 9 1 3 cagcttctgc 652 0.446357814957581 0.111111111111111 1 9 1 3 NM_009338 refGene chr17 13166480 - 57147 graph_last 6 30 cagttcaccc 653 0.446357814957581 0.111111111111111 1 9 1 3 ccacagggca 654 0.446357814957581 0.111111111111111 1 9 1 3 ccaggcggtg 655 0.446357814957581 0.111111111111111 1 9 1 3 NM_011531 refGene chr1 135390854 - 6259 graph_last l 7 39 ccagggggac 656 0.446357814957581 Inf 13 0 16 0 AY301068 knownGene chr10 26053645 - 11071 graph_last l 16 40 ccctgtaata 657 0.446357814957581 0.111111111111111 1 9 1 3 NM_016925 refGene chr8 125083415 + 134242 graph_last 5 22 cctaccttcc 658 0.446357814957581 0.111111111111111 1 9 1 3 cctgtattcc 659 0.446357814957581 0.111111111111111 1 9 1 3 NM_144916 refGene chr6 73402412 + 113854 graph_last l 4 12 ccttagccta 660 0.446357814957581 0.111111111111111 1 9 1 3 cctttggcaa 661 0.446357814957581 2.78571428571429 39 14 49 5 BC049678 knownGene chr8 71178447 - 131010 graph_last l 24 83 cggctgtcgc 662 0.446357814957581 Inf 14 0 17 0 NM_026856 refGene chr5 105774526 - 105522 graph_last l 3 15 ctaagaaccg 663 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr12 83328225 + 0 unique_long l 3 12 ctcagtccat 664 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr3 125974948 - 0 unique_long l 2 6 ctgaaatcca 665 0.446357814957581 0.111111111111111 1 9 1 3 ctgctttctg 666 0.446357814957581 0.111111111111111 1 9 1 3 ctgtacgcag 667 0.446357814957581 Inf 13 0 16 0 ctgtctggtt 668 0.446357814957581 0.111111111111111 1 9 1 3 NM_173400 refGene chr4 85304442 - 94706 graph_last 1 10 ctgttaagtg 669 0.446357814957581 0.111111111111111 1 9 1 3 cttacatttc 670 0.446357814957581 Inf 14 0 17 0 NM_007727 refGene chr15 94185949 + 49433 graph_last l 34 87 ctttaagatg 671 0.446357814957581 0.111111111111111 1 9 1 3 NM_029810 refGene chr19 46888273 - 70244 graph_last l 2 17 ctttcattat 672 0.446357814957581 0.111111111111111 1 9 1 3 NM_019880 refGene chr17 28964297 - 58352 graph_last l 10 27 ctttgccctg 673 0.446357814957581 0.111111111111111 1 9 1 3 gaaatgataa 674 0.446357814957581 0.111111111111111 1 9 1 3 NM_172676 refGene chr2 181443433 - 82496 graph_last 1 13 gaagggggct 675 0.446357814957581 0.111111111111111 1 9 1 3 NM_133708 refGene chr1 76993848 + 3708 graph_last l 7 25 gacagtgaga 676 0.446357814957581 0.111111111111111 1 9 1 3 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 677 0.446357814957581 4 24 6 30 2 gacccaccgc 678 0.446357814957581 Inf 13 0 16 0 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 679 0.446357814957581 3.22222222222222 29 9 36 3 NM_020588 refGene chr1 137257395 - 6407 graph_last l 27 82 gagcagggga 680 0.446357814957581 Inf 13 0 16 0 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 681 0.446357814957581 2 58 29 73 10 NM_011186 refGene chr14 45704939 - 41303 graph_second 0 7 gagtcattgt 682 0.446357814957581 0.111111111111111 1 9 1 3 NM_133236 refGene chr6 8320530 + 110253 graph_last 14 29 gagtgacaaa 683 0.446357814957581 0.111111111111111 1 9 1 3 gagttatttt 684 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 685 0.446357814957581 4 24 6 30 2 NM_053078 refGene chr18 33627441 + 63718 graph_last 0 6 gcacttatta 686 0.446357814957581 0.111111111111111 1 9 1 3 gctatgcaaa 687 0.446357814957581 0.111111111111111 1 9 1 3 NM_008801 refGene chr1 88425290 - 4331 graph_last l 20 37 ggaacaaacc 688 0.446357814957581 0.111111111111111 1 9 1 3 NM_016759 refGene chr11 102066168 + 24069 graph_last l 40 181 ggaagtggtg 689 0.446357814957581 4 24 6 30 2 NM_009974 refGene chr8 96736483 - 132594 graph_last l 7 21 ggagatgaga 690 0.446357814957581 0.111111111111111 1 9 1 3 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 691 0.446357814957581 2.15384615384615 56 26 71 9 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 692 0.446357814957581 0.540983606557377 33 61 41 21 ggggctcaca 693 0.446357814957581 6.66666666666667 20 3 25 1 gggtgggaag 694 0.446357814957581 3.22222222222222 29 9 36 3 ggtaaacaat 695 0.446357814957581 Inf 13 0 16 0 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 696 0.446357814957581 Inf 14 0 17 0 ggttttcaag 697 0.446357814957581 2.75 33 12 42 4 gtactgacat 698 0.446357814957581 Inf 13 0 16 0 gtgcatccag 699 0.446357814957581 Inf 13 0 16 0 NM_023173 refGene chr1 174644531 - 8404 graph_last l 4 11 gtggatgtca 700 0.446357814957581 0.111111111111111 1 9 1 3 gtggggagcc 701 0.446357814957581 Inf 14 0 17 0 gtggttcaca 702 0.446357814957581 Inf 14 0 17 0 NM_009931 refGene chr8 11909162 - 127961 graph_last l 13 28 gtgtctgata 703 0.446357814957581 0.111111111111111 1 9 1 3 NM_011707 refGene chr11 78072882 + 21953 graph_last l 20 59 gtgtgccagg 704 0.446357814957581 0.111111111111111 1 9 1 3 NM_146008 refGene chr10 86935884 + 14433 graph_last l 3 18 gttgttttat 705 0.446357814957581 0.111111111111111 1 9 1 3 genomic chr9 97828473 - 0 unique_both b 10 18 taaagcgttg 706 0.446357814957581 0.111111111111111 1 9 1 3 taaatatata 707 0.446357814957581 0.111111111111111 1 9 1 3 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 708 0.446357814957581 0.111111111111111 1 9 1 3 taataaaatg 709 0.446357814957581 0.111111111111111 1 9 1 3 NM_008666 refGene chr12 24561293 + 26811 graph_last l 15 29 taatgtttat 710 0.446357814957581 0.111111111111111 1 9 1 3 tacaaaaagc 711 0.446357814957581 0.111111111111111 1 9 1 3 AY057898 knownGene chr10 124793682 - 16432 graph_last 2 18 taccattaca 712 0.446357814957581 0.111111111111111 1 9 1 3 NM_010895 refGene chr11 97910831 - 23629 graph_last b 21 98 tacgaggagc 713 0.446357814957581 3.22222222222222 29 9 37 3 NM_175492 refGene chr11 105593087 + 24424 graph_last l 32 69 tatacagagc 714 0.446357814957581 0.111111111111111 1 9 1 3 NM_148938 refGene chr15 9001386 - 45224 graph_last l 46 100 tatagaaagg 715 0.446357814957581 0.111111111111111 1 9 1 3 tatttcagtg 716 0.446357814957581 0.111111111111111 1 9 1 3 tcatccaatg 717 0.446357814957581 0.111111111111111 1 9 1 3 tcctataaag 718 0.446357814957581 0.111111111111111 1 9 1 3 NM_010404 refGene chr11 99931508 - 23830 graph_last l 9 50 tctgccagaa 719 0.446357814957581 0.111111111111111 1 9 1 3 AK049571 all_mrna chr17 84592004 - 61688 graph_second 0 33 tctgtttgtc 720 0.446357814957581 0.111111111111111 1 9 1 3 CK346937 all_est chr6 135531640 - 117451 graph_last 0 10 tcttcttaac 721 0.446357814957581 0.111111111111111 1 9 1 3 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 722 0.446357814957581 Inf 14 0 17 0 tgcctttaat 723 0.446357814957581 0.111111111111111 1 9 1 3 tgtaagtctg 724 0.446357814957581 3.22222222222222 29 9 36 3 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 725 0.446357814957581 0.111111111111111 1 9 1 3 tgtgaccccc 726 0.446357814957581 Inf 13 0 16 0 tgtgtcattt 727 0.446357814957581 0.384615384615385 10 26 12 9 tgttaagatg 728 0.446357814957581 Inf 13 0 16 0 NM_009255 refGene chr1 81573344 - 3878 graph_last l 19 285 tgttcactaa 729 0.446357814957581 0.111111111111111 1 9 1 3 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 730 0.446357814957581 6.66666666666667 20 3 25 1 NM_009061 refGene chr1 147167009 - 6919 graph_last l 42 62 ttaccacata 731 0.446357814957581 0.111111111111111 1 9 1 3 NM_013855 refGene chr17 23976949 + 57786 graph_second 0 21 ttataaactg 732 0.446357814957581 0.111111111111111 1 9 1 3 NM_023858 refGene chr9 14018789 - 135264 graph_last l 4 12 ttataatctt 733 0.446357814957581 0.111111111111111 1 9 1 3 ttatctgtgt 734 0.446357814957581 0.111111111111111 1 9 1 3 ttctaagaag 735 0.446357814957581 0.111111111111111 1 9 1 3 AK013739 knownGene chr1 39488467 - 1712 graph_last l 16 48 ttgaaaccct 736 0.446357814957581 0.111111111111111 1 9 1 3 NM_029870 refGene chr17 26374491 + 58052 graph_last 0 81 ttgaatgtaa 737 0.446357814957581 0.111111111111111 1 9 1 3 CK339473 all_est chr1 53427865 - 2273 graph_last l 33 64 ttgctttgaa 738 0.446357814957581 0.111111111111111 1 9 1 3 NM_172827 refGene chr17 17012571 - 57456 graph_last l 19 38 tttaactata 739 0.446357814957581 0.111111111111111 1 9 1 3 NM_011801 refGene chr8 113461104 - 133515 graph_last l 25 71 tttccagcaa 740 0.446357814957581 0.111111111111111 1 9 1 3 NM_054072 refGene chr18 37958141 + 64094 graph_last l 118 278 tctggagaca 741 0.447415788846176 0.447368421052632 17 38 21 13 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 742 0.450436480789913 0.488372093023256 21 43 26 15 gtctacagag 743 0.484889424677788 0.384615384615385 10 26 13 9 NM_007637 refGene chr15 31931318 + 46012 graph_last l 50 193 tcatagaaac 744 0.484889424677788 0.384615384615385 10 26 13 9 AV070736 all_est chr1 94583963 - 4754 graph_last 83 220 tctgtgatgt 745 0.484889424677788 0.384615384615385 10 26 13 9 tgtgaagtag 746 0.484889424677788 0.384615384615385 10 26 13 9 NM_010629 refGene chr1 167474293 + 7952 graph_last l 125 305 cagttattgt 747 0.487908961703784 0.473684210526316 18 38 22 13 tttctgtatg 748 0.487908961703784 0.473684210526316 18 38 22 13 NM_016743 refGene chr15 97285350 + 49595 graph_last l 127 271 gttacgtaac 749 0.495402789875119 0.347826086956522 8 23 10 8 gttgctgttt 750 0.495402789875119 0.347826086956522 8 23 10 8 NM_013725 refGene chr7 38100510 - 120754 graph_last 141 373 tctgtgcacc 751 0.499204565017362 0.578125 37 64 46 22 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 752 0.508334922804929 1.63793103448276 95 58 119 20 gcaataaatg 753 0.5276392960675 1.67307692307692 87 52 109 18 NM_178650 refGene chr19 3999389 + 67381 graph_last l 190 473 gctggcagcc 754 0.5276392960675 2.64285714285714 37 14 46 5 aacgcgtgtg 755 0.529278524974702 0.166666666666667 2 12 3 4 NM_194462 refGene chr5 3973741 + 100160 graph_last 0 11 aagccgagat 756 0.529278524974702 0.166666666666667 2 12 3 4 NM_153545 refGene chr11 120272391 + 25607 graph_last l 8 32 aaggctgcag 757 0.529278524974702 0.166666666666667 2 12 3 4 NM_013854 refGene chr17 35652435 - 59005 graph_last l 9 26 aaggtggcgt 758 0.529278524974702 0.166666666666667 2 12 3 4 NM_177298 refGene chr5 31109648 - 101730 graph_last l 15 38 aatttctcct 759 0.529278524974702 0.166666666666667 2 12 3 4 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 760 0.529278524974702 0.352941176470588 6 17 7 6 NM_009786 refGene chr1 163743500 - 7720 graph_last b 19 109 acgcgaaaac 761 0.529278524974702 6 18 3 22 1 actgcagatg 762 0.529278524974702 0.166666666666667 2 12 3 4 NM_008165 refGene chr11 56925522 + 20133 graph_last l 9 93 agccacagtt 763 0.529278524974702 0.166666666666667 2 12 3 4 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 764 0.529278524974702 6 18 3 22 1 atggcttaat 765 0.529278524974702 6 18 3 22 1 attttcatca 766 0.529278524974702 0.166666666666667 2 12 3 4 caaaaataaa 767 0.529278524974702 0.511627906976744 22 43 28 15 cagaagaaag 768 0.529278524974702 6 18 3 22 1 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 769 0.529278524974702 0.166666666666667 2 12 3 4 NM_177235 refGene chr1 34541314 - 1365 graph_last l 39 94 cccagcaaac 770 0.529278524974702 0.166666666666667 2 12 3 4 NM_007828 refGene chr10 83563948 + 14173 graph_last b 8 51 ccgcgcaaca 771 0.529278524974702 0.352941176470588 6 17 7 6 NM_010768 refGene chr10 83635026 + 14184 graph_last l 43 134 cctgggacac 772 0.529278524974702 0.166666666666667 2 12 3 4 NM_009763 refGene chr5 42766418 - 102326 graph_last l 19 38 ctatttaaag 773 0.529278524974702 0.166666666666667 2 12 3 4 ctgctatccg 774 0.529278524974702 1.8 72 40 90 14 ctggaagagg 775 0.529278524974702 0.166666666666667 2 12 3 4 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 776 0.529278524974702 2.64285714285714 37 14 47 5 NM_012014 refGene chr13 54519110 - 35074 graph_last l 11 43 gaaaggtcag 777 0.529278524974702 0.352941176470588 6 17 7 6 BY374659 all_est chr13 52272846 - 34920 graph_last l 74 162 gaaccagtta 778 0.529278524974702 0.166666666666667 2 12 3 4 NM_026493 refGene chr1 10123852 - 322 graph_last l 28 88 gactgatgtc 779 0.529278524974702 0.166666666666667 2 12 3 4 NM_033509 refGene chr1 175860516 - 8514 graph_last 4 19 ggaatggtct 780 0.529278524974702 0.166666666666667 2 12 3 4 NM_153150 refGene chr16 17530303 - 51984 graph_last l 5 28 gtcaggtcac 781 0.529278524974702 0.166666666666667 2 12 3 4 gtcagttaaa 782 0.529278524974702 6 18 3 22 1 NM_019649 refGene chr7 16587669 - 119324 graph_last l 31 100 gtgaagccaa 783 0.529278524974702 0.166666666666667 2 12 3 4 NM_029031 refGene chr11 72747651 - 21365 graph_last l 8 32 gtgcacgtct 784 0.529278524974702 0.166666666666667 2 12 3 4 gttaaaagaa 785 0.529278524974702 0.166666666666667 2 12 3 4 gttggaaaca 786 0.529278524974702 0.352941176470588 6 17 7 6 taataaataa 787 0.529278524974702 0.352941176470588 6 17 7 6 NM_009672 refGene chr9 64726839 + 138431 graph_last l 35 106 tacctcgatg 788 0.529278524974702 6 18 3 22 1 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 789 0.529278524974702 0.473684210526316 18 38 23 13 NM_133745 refGene chr10 35377401 + 11550 graph_last l 161 241 tatagctgta 790 0.529278524974702 0.166666666666667 2 12 3 4 NM_021477 refGene chr16 6895625 + 51276 graph_last l 42 94 tcagaggtgt 791 0.529278524974702 0.166666666666667 2 12 3 4 NM_007529 refGene chr3 90072744 - 86600 graph_last l 49 205 tcagctgcct 792 0.529278524974702 0.166666666666667 2 12 3 4 NM_011492 refGene chr10 82440175 - 14048 graph_last l 37 175 tgcacaggct 793 0.529278524974702 0.352941176470588 6 17 7 6 AK129145 knownGene chr4 150502502 + 99571 graph_last l 14 84 tgggctgctg 794 0.529278524974702 0.352941176470588 6 17 7 6 tgtataaaat 795 0.529278524974702 0.352941176470588 6 17 7 6 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 796 0.529278524974702 0.511627906976744 22 43 28 15 ttagaacgtg 797 0.529278524974702 0.352941176470588 6 17 7 6 ttccctgaag 798 0.529278524974702 0.166666666666667 2 12 3 4 ttcgtccttt 799 0.529278524974702 0.352941176470588 6 17 7 6 genomic chr16 21270920 + 0 unique_long l 12 55 tttgagtcct 800 0.529278524974702 0.166666666666667 2 12 3 4 ttttaaaata 801 0.529278524974702 0.352941176470588 6 17 7 6 aacggtgttt 802 0.529281705080058 0.285714285714286 4 14 5 5 aatgagacaa 803 0.529281705080058 0.285714285714286 4 14 5 5 NM_011857 refGene chr8 48179124 - 129903 graph_last 2 24 acccctctgt 804 0.529281705080058 0.285714285714286 4 14 5 5 agggacaggt 805 0.529281705080058 0.285714285714286 4 14 5 5 NM_031874 refGene chr9 22514478 - 135726 graph_last 0 11 aggtagaaga 806 0.529281705080058 0.285714285714286 4 14 5 5 NM_024267 refGene chr14 46753817 - 41402 graph_last l 12 54 atgggcctca 807 0.529281705080058 0.285714285714286 4 14 5 5 NM_024427 refGene chr9 69500644 - 138896 graph_last 1 57 cccgtagccc 808 0.529281705080058 0.285714285714286 4 14 5 5 NM_029999 refGene chr17 73357998 + 61062 graph_last l 13 53 cctgttgtga 809 0.529281705080058 0.285714285714286 4 14 5 5 gcggcggggc 810 0.529281705080058 6 18 3 23 1 NM_021921 refGene chr15 91147347 - 49270 graph_last l 19 73 gcttttggga 811 0.529281705080058 0.285714285714286 4 14 5 5 gggatataaa 812 0.529281705080058 0.285714285714286 4 14 5 5 NM_172618 refGene chr17 29856015 - 58475 graph_last l 6 39 gtagatgtgg 813 0.529281705080058 0.285714285714286 4 14 5 5 gtatttaata 814 0.529281705080058 0.285714285714286 4 14 5 5 NM_011012 refGene chr2 181568928 + 82513 graph_last l 25 90 tagctagccc 815 0.529281705080058 0.285714285714286 4 14 5 5 NM_027324 refGene chr13 53858187 + 35020 graph_last l 16 48 tctgtgacaa 816 0.529281705080058 0.285714285714286 4 14 5 5 tgaaaatgta 817 0.529281705080058 0.285714285714286 4 14 5 5 tgctgaatca 818 0.529281705080058 0.285714285714286 4 14 5 5 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 819 0.529281705080058 0.285714285714286 4 14 5 5 NM_028982 refGene chr6 136643905 + 117563 graph_last l 35 126 tggtgcggtg 820 0.529281705080058 0.285714285714286 4 14 5 5 tgtgtttgtg 821 0.529281705080058 0.285714285714286 4 14 5 5 tgtttcatac 822 0.529281705080058 0.285714285714286 4 14 5 5 tttttgtagt 823 0.529281705080058 0.285714285714286 4 14 5 5 NM_153526 refGene chr5_random 23332765 - 109461 graph_last 21 98 aacctcgctg 824 0.541132859325452 0.391304347826087 9 23 11 8 accttttctt 825 0.541132859325452 0.391304347826087 9 23 11 8 atccggcgcc 826 0.541273715651419 3 27 9 34 3 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 827 0.542999050048761 3.66666666666667 22 6 28 2 NM_010562 refGene chr7 97874520 + 123908 graph_last l 55 216 ggagggatca 828 0.542999050048761 3.66666666666667 22 6 28 2 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 829 0.542999050048761 3.66666666666667 22 6 28 2 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 830 0.550532587984732 3.83333333333333 23 6 29 2 NM_011968 refGene chr12 50762699 + 28033 graph_last l 37 125 cctgtctact 831 0.551376399699435 0.413793103448276 12 29 15 10 NM_019431 refGene chr11 107397888 - 24662 graph_second l 9 66 tggcctttga 832 0.551376399699435 0.413793103448276 12 29 15 10 aaaaataaaa 833 0.583102796884708 Inf 11 0 14 0 aattcccttt 834 0.583102796884708 Inf 11 0 14 0 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 835 0.583102796884708 Inf 11 0 14 0 AK005166 knownGene chr9 111425243 + 141435 graph_last l 19 60 agggccagga 836 0.583102796884708 Inf 11 0 14 0 NM_013922 refGene chr11 50436366 - 19703 graph_last l 11 46 caaaagttta 837 0.583102796884708 Inf 11 0 14 0 NM_016876 refGene chr9 21445046 - 135590 graph_last 32 95 cagccaaacc 838 0.583102796884708 Inf 11 0 14 0 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 839 0.583102796884708 Inf 11 0 14 0 cggagaccct 840 0.583102796884708 Inf 11 0 14 0 NM_007990 refGene chr19 6104038 + 67634 graph_last l 18 60 ctgggaggta 841 0.583102796884708 Inf 11 0 14 0 gaaaggaaac 842 0.583102796884708 Inf 11 0 14 0 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 843 0.583102796884708 Inf 11 0 14 0 gcccccaatg 844 0.583102796884708 Inf 11 0 14 0 NM_013782 refGene chr7 133315232 + 126067 graph_last l 35 97 gctcccttga 845 0.583102796884708 Inf 11 0 14 0 gggaacgcac 846 0.583102796884708 Inf 11 0 14 0 NM_177270 refGene chr5 92464338 - 104668 graph_last 40 111 gtgactgttc 847 0.583102796884708 Inf 11 0 14 0 NM_008064 refGene chr11 118841324 - 25448 graph_last l 24 82 tacataatcc 848 0.583102796884708 Inf 11 0 14 0 NM_013608 refGene chr10 131323738 + 16744 graph_last l 94 328 tcgcaagcaa 849 0.583102796884708 2.35294117647059 40 17 50 6 NM_021535 refGene chr4 40784770 - 92391 graph_last l 12 70 tctgcgtcct 850 0.583102796884708 Inf 11 0 14 0 tgcagcactg 851 0.583102796884708 Inf 11 0 14 0 tgtagtgtaa 852 0.583102796884708 0.692913385826772 88 127 111 44 NM_012010 refGene chrX 83927636 + 149980 graph_last 14 45 ttccaataca 853 0.583102796884708 Inf 11 0 14 0 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 854 0.583102796884708 Inf 11 0 14 0 ccagtgcaga 855 0.599437722641793 Inf 12 0 15 0 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 856 0.599437722641793 Inf 12 0 15 0 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 857 0.599437722641793 0.525 21 40 26 14 NM_027898 refGene chr7 25153876 - 120022 graph_last l 21 74 gaaccctggc 858 0.599437722641793 Inf 12 0 15 0 NM_021549 refGene chr7 37815866 - 120715 graph_last l 19 86 gacctcatct 859 0.599437722641793 Inf 12 0 15 0 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 860 0.599437722641793 1.5 117 78 147 27 NM_177188 refGene chr15_random 18412680 + 50810 graph_last 6 30 gcttgctgcc 861 0.599437722641793 Inf 12 0 15 0 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 862 0.599437722641793 Inf 12 0 15 0 NM_182716 refGene chr1 135449108 - 6266 graph_last l 16 67 ggggtctgcc 863 0.599437722641793 Inf 12 0 15 0 NM_021519 refGene chr2 25828459 + 72856 graph_last l 161 295 gtcaaacgga 864 0.599437722641793 Inf 12 0 15 0 BC021511 knownGene chr2 105018789 - 77566 graph_last l 8 33 tacggaaatg 865 0.599437722641793 Inf 12 0 15 0 tggatgctgg 866 0.599437722641793 Inf 12 0 15 0 ttgcacactt 867 0.599437722641793 Inf 12 0 15 0 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 868 0.610837032772595 2.04347826086957 47 23 59 8 cctcggaaaa 869 0.624842149741913 0.578125 37 64 47 22 ctcgagtctc 870 0.626274219870129 2.5 35 14 44 5 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 871 0.632460603969707 0.434782608695652 10 23 12 8 tgtactggca 872 0.632460603969707 0.434782608695652 10 23 12 8 caaggtgaca 873 0.64229702601007 0.722222222222222 104 144 131 50 NM_023603 refGene chr4 125949966 - 97273 graph_last l 40 132 ttgtgtgctg 874 0.648049901568441 0.525 21 40 27 14 ttaatattta 875 0.667574480470105 0.35 7 20 9 7 NM_175266 refGene chr9 113882938 + 141650 graph_last l 48 97 ttgtggagtg 876 0.667574480470105 0.35 7 20 9 7 ccaaaaaaaa 877 0.674643981328448 0.514285714285714 18 35 22 12 NM_177049 refGene chr14 46207444 - 41370 graph_last l 62 211 gaatttggga 878 0.674643981328448 0.514285714285714 18 35 22 12 tcttaatgaa 879 0.674643981328448 0.514285714285714 18 35 22 12 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 880 0.676722240486568 2.15 43 20 54 7 tctgccctct 881 0.676722240486568 0.482758620689655 14 29 17 10 NM_010808 refGene chr2 156443008 + 80684 graph_last l 5 21 aaactcctgt 882 0.680442873913672 0.222222222222222 2 9 2 3 NM_025441 refGene chr12 65193787 + 28531 graph_last 21 68 aaatgaaacc 883 0.680442873913672 0.357142857142857 5 14 6 5 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 884 0.680442873913672 0.222222222222222 2 9 2 3 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 885 0.680442873913672 0.222222222222222 2 9 2 3 aactgaacaa 886 0.680442873913672 0.222222222222222 2 9 2 3 CD352670 all_est chr5 122023911 - 106823 graph_last l 33 377 aacttaaaaa 887 0.680442873913672 0.423076923076923 11 26 14 9 NM_026902 refGene chrX 29777112 + 147988 graph_last l 31 95 aagacaaagc 888 0.680442873913672 0.423076923076923 11 26 14 9 NM_009112 refGene chr3 96450188 + 87150 graph_last l 19 59 aagcagaagg 889 0.680442873913672 0.222222222222222 2 9 2 3 NM_173071 refGene chr4 128932627 + 97545 graph_last l 18 90 aagctgggct 890 0.680442873913672 0.25 3 12 4 4 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 891 0.680442873913672 0.222222222222222 2 9 2 3 NM_026165 refGene chr18_random 1519575 + 66799 graph_last l 17 28 aagtaaggtg 892 0.680442873913672 0.222222222222222 2 9 2 3 NM_133964 refGene chr10 83760581 + 14204 graph_last l 17 74 aataaaataa 893 0.680442873913672 0.25 3 12 4 4 aatgtggcag 894 0.680442873913672 0.222222222222222 2 9 2 3 AB016490 knownGene chr3 92649260 + 86894 graph_last l 23 53 acacagactt 895 0.680442873913672 0.25 3 12 4 4 NM_133801 refGene chr17 56988329 - 60299 graph_last l 15 47 accacaaagg 896 0.680442873913672 0.25 3 12 4 4 acccctgacc 897 0.680442873913672 2.77777777777778 25 9 32 3 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 898 0.680442873913672 0.222222222222222 2 9 2 3 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 899 0.680442873913672 3.5 21 6 26 2 NM_008169 refGene chr2 25557785 - 72823 graph_last l 60 152 actagctctc 900 0.680442873913672 0.222222222222222 2 9 2 3 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 901 0.680442873913672 0.222222222222222 2 9 2 3 BX631115 all_est chr13 46275336 - 34561 graph_last l 17 31 aggaacagat 902 0.680442873913672 0.222222222222222 2 9 2 3 NM_175930 refGene chr12 113764797 + 31667 graph_last l 10 25 agggagggtg 903 0.680442873913672 0.222222222222222 2 9 2 3 NM_177614 refGene chr10 130368387 - 16662 graph_last l 11 55 agggtgagga 904 0.680442873913672 0.357142857142857 5 14 6 5 NM_023524 refGene chr7 3687528 - 118479 graph_last l 4 21 agggtgctgg 905 0.680442873913672 0.222222222222222 2 9 2 3 NM_175190 refGene chr2 32553095 - 73420 graph_last 54 93 agtacaatga 906 0.680442873913672 0.25 3 12 4 4 NM_011502 refGene chr19 11606418 + 68093 graph_last l 4 37 agtgagtgac 907 0.680442873913672 0.222222222222222 2 9 2 3 NM_025333 refGene chr19 10425016 - 68003 graph_last l 5 15 atcaaaaagc 908 0.680442873913672 0.222222222222222 2 9 2 3 NM_011865 refGene chr6 87941239 - 114590 graph_second 0 8 atccaactgt 909 0.680442873913672 0.222222222222222 2 9 2 3 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 910 0.680442873913672 0.222222222222222 2 9 2 3 NM_178597 refGene chr14 15619980 - 39454 graph_last l 54 103 atgacataga 911 0.680442873913672 0.357142857142857 5 14 6 5 NM_011342 refGene chr3 100807621 + 87579 graph_last l 7 31 atgcacagat 912 0.680442873913672 0.222222222222222 2 9 2 3 NM_144896 refGene chr3 87616277 + 86417 graph_last l 5 19 atggtggcag 913 0.680442873913672 0.222222222222222 2 9 2 3 NM_008160 refGene chr9 110981083 + 141375 graph_last 0 86 atggtgtttc 914 0.680442873913672 0.357142857142857 5 14 6 5 AU256308 all_est chr4 53386347 + 93312 graph_last l 4 17 atgtattcag 915 0.680442873913672 0.222222222222222 2 9 2 3 NM_144800 refGene chr15 60223519 + 47251 graph_last l 3 13 attattagaa 916 0.680442873913672 0.222222222222222 2 9 2 3 atttgagttc 917 0.680442873913672 0.222222222222222 2 9 2 3 atttttgtat 918 0.680442873913672 0.222222222222222 2 9 2 3 caaatgaagt 919 0.680442873913672 5.33333333333333 16 3 20 1 NM_026122 refGene chr9 85866120 - 139919 graph_last l 21 50 caatttttct 920 0.680442873913672 0.25 3 12 4 4 cacacacaca 921 0.680442873913672 0.423076923076923 11 26 14 9 caccaccgtt 922 0.680442873913672 1.55737704918033 95 61 119 21 cagatctttg 923 0.680442873913672 0.638888888888889 46 72 58 25 genomic chr10 126155645 + 0 unique_long l 8 29 caggaggtca 924 0.680442873913672 0.222222222222222 2 9 2 3 NM_198420 refGene chr15 78244879 + 48182 graph_last l 4 23 cagtgcactg 925 0.680442873913672 0.222222222222222 2 9 2 3 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 926 0.680442873913672 0.25 3 12 4 4 NM_028967 refGene chr19 6179959 - 67652 graph_last l 47 89 ccaaaaggaa 927 0.680442873913672 0.222222222222222 2 9 2 3 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 928 0.680442873913672 0.423076923076923 11 26 14 9 NM_177735 refGene chr5 143487678 - 108399 graph_last l 31 144 ccaccattgt 929 0.680442873913672 0.222222222222222 2 9 2 3 NM_133971 refGene chr8 12325947 - 127998 graph_last 2 23 ccagcaggca 930 0.680442873913672 0.25 3 12 4 4 AK051528 all_mrna chr11 116477631 + 25266 graph_last 1 7 cccgtgaggc 931 0.680442873913672 0.222222222222222 2 9 2 3 NM_172993 refGene chr15 55148541 - 47003 graph_last 11 45 ccctcagtgc 932 0.680442873913672 0.25 3 12 4 4 NM_011492 refGene chr10 82439824 + 14048 graph_last l 15 81 ccgccctgcg 933 0.680442873913672 5.33333333333333 16 3 20 1 NM_016909 refGene chr8 126836338 + 134395 graph_last l 47 96 cctggtaagt 934 0.680442873913672 0.222222222222222 2 9 2 3 NM_026585 refGene chr6 117890386 + 116329 graph_last b 14 37 cggggccttc 935 0.680442873913672 0.25 3 12 4 4 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 936 0.680442873913672 5.33333333333333 16 3 20 1 NM_026993 refGene chr3 149812435 + 90163 graph_last l 12 40 ctactctcta 937 0.680442873913672 0.222222222222222 2 9 2 3 ctcatttcct 938 0.680442873913672 0.222222222222222 2 9 2 3 BC003217 knownGene chr17 62607777 - 60440 graph_last 28 64 ctgaaaaagt 939 0.680442873913672 0.222222222222222 2 9 2 3 BC051520 all_mrna chr2_random 6368419 + 82674 graph_last 0 15 ctgcctgcag 940 0.680442873913672 0.222222222222222 2 9 2 3 NM_010875 refGene chr9 51510696 + 137508 graph_last 1 17 ctggtcttta 941 0.680442873913672 0.222222222222222 2 9 2 3 cttaggcagc 942 0.680442873913672 0.222222222222222 2 9 2 3 NM_011767 refGene chr15_random 2842098 - 50489 graph_last l 29 66 cttatgtctt 943 0.680442873913672 0.222222222222222 2 9 2 3 cttcccactg 944 0.680442873913672 0.222222222222222 2 9 2 3 NM_007575 refGene chr16 10024134 - 51425 graph_last l 16 44 cttccctggc 945 0.680442873913672 0.222222222222222 2 9 2 3 NM_175015 refGene chr2 74302832 - 75802 graph_last 354 852 gaaatatatg 946 0.680442873913672 0.571428571428571 28 49 35 17 NM_146157 refGene chr4 138361968 + 98421 graph_last l 6 28 gaaatgagat 947 0.680442873913672 0.222222222222222 2 9 2 3 NM_027911 refGene chr9 21633387 - 135606 graph_last l 13 44 gaactgaaaa 948 0.680442873913672 0.222222222222222 2 9 2 3 BC024678 knownGene chr5 77020270 + 104028 graph_last l 11 33 gaacttggaa 949 0.680442873913672 0.222222222222222 2 9 2 3 BE649911 all_est chr13 58923938 + 35413 graph_last l 27 89 gaatgtctct 950 0.680442873913672 0.222222222222222 2 9 2 3 NM_009129 refGene chr1 81220284 - 3857 graph_last l 55 117 gaattgatga 951 0.680442873913672 0.222222222222222 2 9 2 3 gaattggaag 952 0.680442873913672 0.222222222222222 2 9 2 3 NM_018770 refGene chr9 49855196 - 137345 graph_last l 14 48 gagacactaa 953 0.680442873913672 0.25 3 12 4 4 gagacggtgc 954 0.680442873913672 0.46875 15 32 19 11 gcaactgggc 955 0.680442873913672 0.222222222222222 2 9 2 3 NM_015827 refGene chr9 100985513 + 140652 graph_last l 21 46 gcctcccaaa 956 0.680442873913672 0.25 3 12 4 4 genomic chr1 81489580 - 0 unique_long l 4 20 gctaacaagg 957 0.680442873913672 0.222222222222222 2 9 2 3 AK014408 knownGene chr11 44190442 + 19304 graph_last l 42 79 gctacaggta 958 0.680442873913672 0.222222222222222 2 9 2 3 gctgtcacct 959 0.680442873913672 0.222222222222222 2 9 2 3 gcttgccctc 960 0.680442873913672 0.222222222222222 2 9 2 3 NM_177876 refGene chr5 122967405 - 106929 graph_last l 8 69 ggagctccgg 961 0.680442873913672 5.33333333333333 16 3 20 1 NM_016680 refGene chr7 16538177 + 119318 graph_last 1 11 ggaggcaggg 962 0.680442873913672 0.222222222222222 2 9 2 3 BM936517 all_est chr18 32418272 + 63652 graph_last 2 11 ggcagacagt 963 0.680442873913672 0.222222222222222 2 9 2 3 ggcgtcatcg 964 0.680442873913672 3.5 21 6 27 2 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 965 0.680442873913672 3.5 21 6 26 2 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 966 0.680442873913672 0.222222222222222 2 9 2 3 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 967 0.680442873913672 5.66666666666667 17 3 21 1 AK005166 knownGene chr9 111415950 - 141435 graph_last 0 6 gggactatgg 968 0.680442873913672 0.222222222222222 2 9 2 3 NM_010460 refGene chr11 95903970 + 23381 graph_last 0 19 ggggggtggg 969 0.680442873913672 0.222222222222222 2 9 2 3 NM_011278 refGene chr5 32900848 + 101872 graph_last l 86 183 ggtatcagtc 970 0.680442873913672 5.33333333333333 16 3 20 1 NM_175260 refGene chr11 68387672 + 20928 graph_last 9 43 ggtttggaat 971 0.680442873913672 0.25 3 12 4 4 NM_023328 refGene chr13 59235377 - 35436 graph_last l 4 15 gtgaaaattg 972 0.680442873913672 0.222222222222222 2 9 2 3 gtgaccttgt 973 0.680442873913672 0.25 3 12 4 4 gtgatgaagc 974 0.680442873913672 0.222222222222222 2 9 2 3 gtggagcaca 975 0.680442873913672 0.25 3 12 4 4 NM_146084 refGene chr18 34656049 - 63766 graph_last l 19 55 gttagcagtg 976 0.680442873913672 0.25 3 12 4 4 NM_172475 refGene chr2 4532338 + 71564 graph_last l 12 49 taaaatgatt 977 0.680442873913672 0.357142857142857 5 14 6 5 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 978 0.680442873913672 0.357142857142857 5 14 6 5 NM_172736 refGene chr7 4015239 + 118503 graph_last l 58 127 taactggagg 979 0.680442873913672 5.66666666666667 17 3 21 1 taattaaaca 980 0.680442873913672 0.222222222222222 2 9 2 3 NM_172674 refGene chr2 156913705 + 80749 graph_last l 10 36 tacagactcg 981 0.680442873913672 0.222222222222222 2 9 2 3 NM_012061 refGene chr14 7708680 - 39067 graph_last l 85 150 tacattgcac 982 0.680442873913672 0.25 3 12 4 4 NM_126165 refGene chr8 108577067 + 133146 graph_last l 42 86 taggacactt 983 0.680442873913672 0.357142857142857 5 14 6 5 NM_145393 refGene chr4 130860643 - 97687 graph_last 13 40 tagtgaatgt 984 0.680442873913672 0.222222222222222 2 9 2 3 NM_019658 refGene chr19 53788622 - 70518 graph_second l 12 28 tagttccttc 985 0.680442873913672 0.222222222222222 2 9 2 3 NM_176836 refGene chr9 14057358 + 135265 graph_last l 4 16 tatagattaa 986 0.680442873913672 0.222222222222222 2 9 2 3 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 987 0.680442873913672 0.4 8 20 10 7 tatttattta 988 0.680442873913672 0.222222222222222 2 9 2 3 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 989 0.680442873913672 0.222222222222222 2 9 2 3 tcaactttca 990 0.680442873913672 0.357142857142857 5 14 6 5 NM_019942 refGene chrX 28238769 - 147895 graph_last l 17 49 tcaattttca 991 0.680442873913672 0.222222222222222 2 9 2 3 tcactgtact 992 0.680442873913672 0.222222222222222 2 9 2 3 NM_133817 refGene chr1 34481941 - 1356 graph_last 2 18 tcattcaatt 993 0.680442873913672 0.222222222222222 2 9 2 3 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 994 0.680442873913672 3.5 21 6 26 2 NM_016804 refGene chr2 75270957 + 75844 graph_last l 24 67 tcctttgtac 995 0.680442873913672 0.25 3 12 4 4 NM_011503 refGene chr8 3619530 + 127598 graph_last l 4 21 tcggaaatga 996 0.680442873913672 0.222222222222222 2 9 2 3 tcgtgattgt 997 0.680442873913672 0.571428571428571 28 49 35 17 NM_009861 refGene chr4 136115446 - 98237 graph_last l 11 41 tctcctgata 998 0.680442873913672 0.222222222222222 2 9 2 3 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 999 0.680442873913672 0.591836734693878 29 49 36 17 AK082350 knownGene chr8 11308623 + 127900 graph_last l 8 19 tctttctgcc 1000 0.680442873913672 0.222222222222222 2 9 2 3 AK032292 knownGene chr7 113554762 + 124809 graph_last l 15 33 tgaaataaat 1001 0.680442873913672 0.222222222222222 2 9 2 3 tgaacccact 1002 0.680442873913672 0.46875 15 32 19 11 NM_080456 refGene chr16 93512171 + 56067 graph_last 0 59 tgacaatatt 1003 0.680442873913672 0.357142857142857 5 14 6 5 NM_146085 refGene chr18 36784870 - 64008 graph_last l 10 32 tgactgaggt 1004 0.680442873913672 0.222222222222222 2 9 2 3 tgagcccaca 1005 0.680442873913672 0.25 3 12 4 4 tgataaaagt 1006 0.680442873913672 0.357142857142857 5 14 6 5 NM_013664 refGene chr17 55944806 + 60188 graph_last l 28 114 tgccacgtgc 1007 0.680442873913672 5.66666666666667 17 3 21 1 NM_011749 refGene chr16 33232157 + 53033 graph_last l 4 15 tgctacctag 1008 0.680442873913672 0.222222222222222 2 9 2 3 NM_028117 refGene chr2 119198414 - 78340 graph_last 0 39 tgcttggcta 1009 0.680442873913672 0.357142857142857 5 14 6 5 tggcaagcta 1010 0.680442873913672 0.222222222222222 2 9 2 3 NM_025959 refGene chr14 37093216 + 40740 graph_last l 11 32 tggcaatcaa 1011 0.680442873913672 0.222222222222222 2 9 2 3 AV205517 all_est chr14 68107603 - 42855 graph_last l 56 129 tggccctctg 1012 0.680442873913672 0.357142857142857 5 14 6 5 NM_175836 refGene chr11 29998268 - 18592 graph_last l 29 148 tggcttttct 1013 0.680442873913672 0.357142857142857 5 14 6 5 NM_027320 refGene chr11 101122702 - 23970 graph_last l 22 73 tgggaagtgt 1014 0.680442873913672 0.4 8 20 10 7 genomic chr17 62610388 - 0 unique_long l 6 51 tggggatgcg 1015 0.680442873913672 0.357142857142857 5 14 6 5 tgtgtcaacc 1016 0.680442873913672 0.534883720930233 23 43 29 15 tgttacgtat 1017 0.680442873913672 0.25 3 12 4 4 NM_024282 refGene chr1 182286220 + 8894 graph_last 4 38 ttacaacatt 1018 0.680442873913672 0.222222222222222 2 9 2 3 ttagatgttt 1019 0.680442873913672 0.25 3 12 4 4 NM_133485 refGene chr10 3350620 + 9896 graph_last l 4 33 ttaggagcta 1020 0.680442873913672 0.25 3 12 4 4 NM_153808 refGene chr19 23452625 + 68731 graph_last 0 137 ttcaaaaaaa 1021 0.680442873913672 3.5 21 6 27 2 BC017687 knownGene chrX 6381072 + 147039 graph_last l 11 36 ttcaatgttc 1022 0.680442873913672 0.222222222222222 2 9 2 3 ttcactcagt 1023 0.680442873913672 0.222222222222222 2 9 2 3 S76838 knownGene chr8 13715222 - 128080 graph_last 2 9 ttcagcagcg 1024 0.680442873913672 0.222222222222222 2 9 2 3 NM_020050 refGene chr7 101779623 - 124151 graph_last l 61 95 ttctagaaca 1025 0.680442873913672 0.222222222222222 2 9 2 3 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 1026 0.680442873913672 0.25 3 12 4 4 NM_080461 refGene chr8 3408505 + 127585 graph_last l 4 19 ttgctgatcc 1027 0.680442873913672 0.222222222222222 2 9 2 3 NM_133771 refGene chr17 74777044 - 61128 graph_last 16 65 ttgtacaaca 1028 0.680442873913672 0.25 3 12 4 4 AK009207 knownGene chr7 124581210 + 125500 graph_last l 6 33 ttgtctccag 1029 0.680442873913672 0.222222222222222 2 9 2 3 tttattattt 1030 0.680442873913672 0.222222222222222 2 9 2 3 NM_026661 refGene chr2 157193613 + 80777 graph_last l 7 25 tttctggtgt 1031 0.680442873913672 0.222222222222222 2 9 2 3 NM_017367 refGene chr5 94551931 + 104851 graph_last 8 22 tttctttggt 1032 0.680442873913672 0.25 3 12 4 4 NM_029979 refGene chr14 58039927 + 42269 graph_last l 27 94 tttgctgtgt 1033 0.680442873913672 0.357142857142857 5 14 6 5 tttgtaatac 1034 0.680442873913672 0.222222222222222 2 9 2 3 ttttatttaa 1035 0.680442873913672 0.222222222222222 2 9 2 3 NM_175514 refGene chr2 84249596 + 76272 graph_last l 50 123 ttttggtgta 1036 0.680442873913672 0.222222222222222 2 9 2 3 tttttatatt 1037 0.680442873913672 0.25 3 12 4 4 aactgagggg 1038 0.69516603287095 0.526315789473684 20 38 25 13 NM_009768 refGene chr10 82015311 + 14067 graph_last 78 531 ctctgactta 1039 0.69516603287095 0.526315789473684 20 38 25 13 gggaaggcgg 1040 0.717914304590039 1.44871794871795 113 78 142 27 aaaaacaaaa 1041 0.734826055872009 Inf 10 0 12 0 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 1042 0.734826055872009 3.33333333333333 20 6 25 2 NM_175473 refGene chr5 95660314 + 104920 graph_last 0 8 aaaagccttt 1043 0.734826055872009 0.166666666666667 1 6 1 2 aaaatattga 1044 0.734826055872009 0.166666666666667 1 6 1 2 aaaatgtata 1045 0.734826055872009 0.166666666666667 1 6 1 2 NM_133352 refGene chr19 41277237 - 69785 graph_last 18 66 aaacattggg 1046 0.734826055872009 0.222222222222222 2 9 3 3 aaactttgta 1047 0.734826055872009 0.222222222222222 2 9 3 3 aaaggatgtt 1048 0.734826055872009 0.166666666666667 1 6 1 2 NM_009059 refGene chr17 33557822 + 58793 graph_last 1 23 aaagtgggtg 1049 0.734826055872009 0.222222222222222 2 9 3 3 NM_028106 refGene chr13 93590067 + 37016 graph_last 5 18 aaatacttgt 1050 0.734826055872009 0.166666666666667 1 6 1 2 NM_027569 refGene chr11 93709672 + 23144 graph_last l 22 65 aaatatatat 1051 0.734826055872009 0.222222222222222 2 9 3 3 NM_029166 refGene chr10 92174772 + 14741 graph_last l 9 28 aaatcgtata 1052 0.734826055872009 0.166666666666667 1 6 1 2 aaatctaaat 1053 0.734826055872009 0.222222222222222 2 9 3 3 aaatgctcat 1054 0.734826055872009 0.166666666666667 1 6 1 2 aaatgtgaat 1055 0.734826055872009 0.222222222222222 2 9 3 3 NM_028325 refGene chrX 27525223 + 147861 graph_last l 21 48 aacaaatcca 1056 0.734826055872009 0.166666666666667 1 6 1 2 NM_146145 refGene chr4 100013212 - 95410 graph_last l 10 21 aacaacattt 1057 0.734826055872009 0.166666666666667 1 6 1 2 NM_175114 refGene chr9 123859088 + 142240 graph_last l 8 43 aacaactccc 1058 0.734826055872009 0.333333333333333 4 12 5 4 aacaagtcat 1059 0.734826055872009 0.222222222222222 2 9 3 3 aacaatattc 1060 0.734826055872009 0.166666666666667 1 6 1 2 aacacatttt 1061 0.734826055872009 0.166666666666667 1 6 1 2 NM_013768 refGene chr14 45597238 - 41288 graph_last l 5 35 aacacttgac 1062 0.734826055872009 0.222222222222222 2 9 3 3 NM_028217 refGene chr16 33753252 + 53134 graph_last 2 5 aacatatatt 1063 0.734826055872009 0.166666666666667 1 6 1 2 NM_010192 refGene chr17 56188251 + 60209 graph_last l 15 38 aacccctttg 1064 0.734826055872009 0.166666666666667 1 6 1 2 NM_007733 refGene chr1 24941145 + 1003 graph_last l 18 39 aacctacaag 1065 0.734826055872009 0.166666666666667 1 6 1 2 aactgacatt 1066 0.734826055872009 0.166666666666667 1 6 1 2 NM_026383 refGene chr4 134650829 - 98090 graph_last 1 14 aactgttttt 1067 0.734826055872009 0.222222222222222 2 9 3 3 aacttcttgt 1068 0.734826055872009 0.45 9 20 11 7 NM_019967 refGene chr4 67236071 + 93999 graph_last l 7 32 aagaagggtc 1069 0.734826055872009 0.166666666666667 1 6 1 2 aagaatgctt 1070 0.734826055872009 0.333333333333333 4 12 5 4 aagaattaga 1071 0.734826055872009 0.166666666666667 1 6 1 2 NM_007597 refGene chr11 49920656 + 19666 graph_last 0 4 aagccagctc 1072 0.734826055872009 0.166666666666667 1 6 1 2 aagccttgct 1073 0.734826055872009 2.25 27 12 34 4 NM_016706 refGene chr11 88575162 + 22945 graph_last l 4 14 aagctaaagg 1074 0.734826055872009 0.222222222222222 2 9 3 3 NM_008198 refGene chr17 34516598 + 58890 graph_last l 9 34 aagctggatt 1075 0.734826055872009 0.333333333333333 4 12 5 4 genomic chr9 44684175 - 0 unique_long l 7 35 aaggagagtt 1076 0.734826055872009 0.333333333333333 4 12 5 4 aaggagtttg 1077 0.734826055872009 Inf 10 0 12 0 NM_011129 refGene chr11 87149368 + 22798 graph_second 3 12 aaggccctgc 1078 0.734826055872009 0.222222222222222 2 9 3 3 BC054403 knownGene chr11 118044118 - 25408 graph_last l 20 104 aagggcaaaa 1079 0.734826055872009 0.166666666666667 1 6 1 2 NM_007714 refGene chr11 50906857 + 19742 graph_last l 21 77 aaggttgact 1080 0.734826055872009 Inf 10 0 12 0 C85381 all_est chr14 29267547 + 40403 graph_last l 6 17 aagtatgtct 1081 0.734826055872009 0.166666666666667 1 6 1 2 aagtttctga 1082 0.734826055872009 0.166666666666667 1 6 1 2 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 1083 0.734826055872009 0.571428571428571 20 35 25 12 aatacagtat 1084 0.734826055872009 0.166666666666667 1 6 1 2 NM_016805 refGene chr1 182364403 + 8917 graph_last 2 22 aatctggctg 1085 0.734826055872009 0.166666666666667 1 6 1 2 NM_172992 refGene chr5 19051048 + 100868 graph_last 0 5 aatgtaagaa 1086 0.734826055872009 0.166666666666667 1 6 1 2 NM_178750 refGene chr2 179880965 + 82347 graph_last l 6 11 aatgtttgaa 1087 0.734826055872009 0.166666666666667 1 6 1 2 aattaattaa 1088 0.734826055872009 0.166666666666667 1 6 1 2 NM_016884 refGene chr14 43945073 - 41160 graph_last 4 27 aattcccgtg 1089 0.734826055872009 Inf 10 0 12 0 NM_011874 refGene chr7_random 41613533 - 127334 graph_last l 22 68 aattttacaa 1090 0.734826055872009 0.333333333333333 4 12 5 4 NM_008817 refGene chr7 6530850 + 118679 graph_last l 27 91 acaagtgcgt 1091 0.734826055872009 0.222222222222222 2 9 3 3 NM_172606 refGene chr15 32066308 + 46028 graph_last l 31 70 acaatcctat 1092 0.734826055872009 0.333333333333333 4 12 5 4 acaattctgt 1093 0.734826055872009 0.166666666666667 1 6 1 2 NM_013672 refGene chr15 104525817 + 50259 graph_last 2 8 acacatcaag 1094 0.734826055872009 0.166666666666667 1 6 1 2 NM_023275 refGene chr12 71318134 + 28940 graph_last 2 9 acaccccttc 1095 0.734826055872009 0.166666666666667 1 6 1 2 NM_008098 refGene chr6 35451107 - 111690 graph_last 1 9 acacttaatg 1096 0.734826055872009 0.166666666666667 1 6 1 2 acagctcaca 1097 0.734826055872009 0.166666666666667 1 6 1 2 acattggagg 1098 0.734826055872009 0.166666666666667 1 6 1 2 AB017136 knownGene chr7 73844109 - 122530 graph_last l 3 12 acattgtcaa 1099 0.734826055872009 0.166666666666667 1 6 1 2 acatttctgt 1100 0.734826055872009 0.222222222222222 2 9 3 3 BB754985 all_est chr6 122632802 - 116716 graph_last l 12 30 acccacaaga 1101 0.734826055872009 0.166666666666667 1 6 1 2 accctcgggc 1102 0.734826055872009 0.166666666666667 1 6 1 2 NM_130450 refGene chr3 133254904 + 89233 graph_last 5 27 accgggctgg 1103 0.734826055872009 0.166666666666667 1 6 1 2 NM_008144 refGene chr19 9160629 - 67907 graph_last l 15 68 acctgcgcct 1104 0.734826055872009 0.222222222222222 2 9 3 3 NM_021538 refGene chr10_random 161020 - 17004 graph_last 22 72 acgattcaga 1105 0.734826055872009 0.222222222222222 2 9 3 3 NM_183426 refGene chr10 82360772 - 14035 graph_last l 3 7 actactgagg 1106 0.734826055872009 0.166666666666667 1 6 1 2 NM_013735 refGene chr2 121465159 - 78588 graph_last 0 12 acttatacct 1107 0.734826055872009 0.166666666666667 1 6 1 2 NM_146229 refGene chr9 117107277 + 141830 graph_last l 70 147 actttcaact 1108 0.734826055872009 0.434782608695652 10 23 13 8 agaaagaaaa 1109 0.734826055872009 0.166666666666667 1 6 1 2 NM_021368 refGene chr2 90387387 - 76683 graph_last 0 10 agaaagctct 1110 0.734826055872009 0.166666666666667 1 6 1 2 NM_145100 refGene chr1 128567666 - 5845 graph_last l 4 32 agaacaaaaa 1111 0.734826055872009 0.166666666666667 1 6 1 2 agaaggactt 1112 0.734826055872009 0.166666666666667 1 6 1 2 NM_024185 refGene chr2 12350814 - 72035 graph_last l 11 27 agaatctcta 1113 0.734826055872009 0.222222222222222 2 9 3 3 NM_013557 refGene chr5 142779334 + 108344 graph_last l 5 18 agactcaatt 1114 0.734826055872009 0.166666666666667 1 6 1 2 NM_007487 refGene chr12 34890884 - 27279 graph_last l 3 13 agagaaatct 1115 0.734826055872009 0.166666666666667 1 6 1 2 agagagagag 1116 0.734826055872009 0.53125 17 32 21 11 agagtaagaa 1117 0.734826055872009 0.166666666666667 1 6 1 2 NM_146154 refGene chr4 131712903 - 97795 graph_last l 3 20 agagttcttc 1118 0.734826055872009 0.166666666666667 1 6 1 2 agatccaact 1119 0.734826055872009 0.166666666666667 1 6 1 2 agatcttgcc 1120 0.734826055872009 0.166666666666667 1 6 1 2 NM_133901 refGene chr5 143720224 + 108421 graph_last 13 34 agattagtcc 1121 0.734826055872009 0.222222222222222 2 9 3 3 NM_134094 refGene chr15 38059520 + 46351 graph_last l 9 35 agattttcct 1122 0.734826055872009 0.166666666666667 1 6 1 2 NM_013510 refGene chr2 157168721 + 80770 graph_last l 17 64 agcaacatca 1123 0.734826055872009 0.333333333333333 4 12 5 4 NM_024457 refGene chr10 120856568 + 16149 graph_last 2 9 agcaagcaag 1124 0.734826055872009 0.166666666666667 1 6 1 2 NM_026648 refGene chr8 121477835 - 133909 graph_last l 16 42 agcagatggt 1125 0.734826055872009 0.166666666666667 1 6 1 2 NM_018766 refGene chr2 180356067 + 82383 graph_last l 2 10 agcccagtcg 1126 0.734826055872009 0.166666666666667 1 6 1 2 agccctttgt 1127 0.734826055872009 0.166666666666667 1 6 1 2 NM_009408 refGene chr2 161260208 + 81031 graph_last b 6 31 agcggggacc 1128 0.734826055872009 Inf 10 0 12 0 agcgtggtgg 1129 0.734826055872009 0.166666666666667 1 6 1 2 AK011294 knownGene chr9 125527317 + 142378 graph_last 0 7 aggaaagtgg 1130 0.734826055872009 0.166666666666667 1 6 1 2 aggaactgta 1131 0.734826055872009 0.166666666666667 1 6 1 2 aggacaatat 1132 0.734826055872009 0.166666666666667 1 6 1 2 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 1133 0.734826055872009 2.66666666666667 24 9 30 3 aggcccaggg 1134 0.734826055872009 0.166666666666667 1 6 1 2 U65636 knownGene chr3 97587933 + 87247 graph_last l 2 26 aggccgctgg 1135 0.734826055872009 0.333333333333333 4 12 5 4 NM_020591 refGene chr11 68913064 + 21005 graph_last l 17 35 aggccttatt 1136 0.734826055872009 0.166666666666667 1 6 1 2 NM_011969 refGene chr2 179848177 - 82346 graph_last l 53 162 aggcgggatc 1137 0.734826055872009 2.77777777777778 25 9 31 3 agggctgtgt 1138 0.734826055872009 0.166666666666667 1 6 1 2 NM_133737 refGene chr6 58201935 + 113084 graph_last l 16 40 aggtaaagga 1139 0.734826055872009 0.222222222222222 2 9 3 3 NM_029850 refGene chr5 122246815 - 106834 graph_last l 2 12 aggtatttaa 1140 0.734826055872009 0.333333333333333 4 12 5 4 NM_027672 refGene chr1 180660989 - 8783 graph_last 0 8 aggttaattt 1141 0.734826055872009 0.166666666666667 1 6 1 2 NM_026796 refGene chr1 193544197 - 9569 graph_last 1 31 agttcacaga 1142 0.734826055872009 0.166666666666667 1 6 1 2 agtttgagga 1143 0.734826055872009 0.166666666666667 1 6 1 2 ataacagatt 1144 0.734826055872009 0.222222222222222 2 9 3 3 NM_181400 refGene chr3 111784441 + 88334 graph_last l 6 22 ataatttaaa 1145 0.734826055872009 0.222222222222222 2 9 3 3 atacttggaa 1146 0.734826055872009 0.166666666666667 1 6 1 2 NM_030723 refGene chr12 8894891 - 26200 graph_last l 4 9 atagtttgtg 1147 0.734826055872009 0.166666666666667 1 6 1 2 NM_144791 refGene chr1 159512864 + 7462 graph_last 2 10 atagttttta 1148 0.734826055872009 0.166666666666667 1 6 1 2 atattgaaga 1149 0.734826055872009 0.352941176470588 6 17 8 6 atcaaccccg 1150 0.734826055872009 0.166666666666667 1 6 1 2 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 1151 0.734826055872009 Inf 10 0 12 0 NM_146236 refGene chrX 125282745 + 151550 graph_last l 7 24 atgaatacat 1152 0.734826055872009 0.166666666666667 1 6 1 2 NM_019392 refGene chr2 120088134 + 78448 graph_last l 17 40 atgaccctta 1153 0.734826055872009 0.166666666666667 1 6 1 2 NM_172468 refGene chr4 59654778 + 93677 graph_last l 3 17 atgagtggcc 1154 0.734826055872009 0.166666666666667 1 6 1 2 NM_172679 refGene chr3 37892046 + 84290 graph_last 2 12 atgccagaac 1155 0.734826055872009 0.166666666666667 1 6 1 2 atggaggcag 1156 0.734826055872009 0.166666666666667 1 6 1 2 atggaggtgc 1157 0.734826055872009 0.166666666666667 1 6 1 2 atggctcata 1158 0.734826055872009 0.166666666666667 1 6 1 2 NM_009408 refGene chr2 161336122 + 81031 graph_last 4 28 atgggaaaat 1159 0.734826055872009 0.222222222222222 2 9 3 3 NM_178854 refGene chr5 95265358 + 104890 graph_last l 3 12 atgtataggg 1160 0.734826055872009 0.166666666666667 1 6 1 2 atgtctcccc 1161 0.734826055872009 0.166666666666667 1 6 1 2 attaaagatg 1162 0.734826055872009 0.166666666666667 1 6 1 2 NM_052973 refGene chr12 47286565 - 27775 graph_last l 8 39 attaagacaa 1163 0.734826055872009 0.222222222222222 2 9 3 3 attatatttt 1164 0.734826055872009 0.166666666666667 1 6 1 2 NM_024428 refGene chr17 74875697 - 61150 graph_last l 10 34 attcccctcc 1165 0.734826055872009 0.222222222222222 2 9 3 3 NM_027867 refGene chr12 51216745 + 28087 graph_last l 6 29 attccgttag 1166 0.734826055872009 0.222222222222222 2 9 3 3 NM_009861 refGene chr4 136099316 - 98237 graph_last l 16 71 attctttata 1167 0.734826055872009 0.352941176470588 6 17 8 6 attgcaattt 1168 0.734826055872009 0.166666666666667 1 6 1 2 NM_016884 refGene chr14 43935722 - 41160 graph_last 11 70 attgccctgc 1169 0.734826055872009 4.66666666666667 14 3 18 1 genomic chr19 16287295 + 0 unique_long l 5 13 attgtaaatt 1170 0.734826055872009 0.166666666666667 1 6 1 2 NM_008380 refGene chr13 15845809 + 32859 graph_last 5 12 attgtggagg 1171 0.734826055872009 0.166666666666667 1 6 1 2 attgtttatg 1172 0.734826055872009 1.84615384615385 48 26 60 9 atttattact 1173 0.734826055872009 0.166666666666667 1 6 1 2 atttcaaagc 1174 0.734826055872009 0.333333333333333 4 12 5 4 AK089775 knownGene chr5 141866215 + 108266 graph_last 2 25 atttcacttt 1175 0.734826055872009 0.222222222222222 2 9 3 3 NM_009011 refGene chr4 55070206 + 93392 graph_last 5 24 atttgagaag 1176 0.734826055872009 0.166666666666667 1 6 1 2 atttgattag 1177 0.734826055872009 0.53125 17 32 21 11 atttgtcagt 1178 0.734826055872009 0.166666666666667 1 6 1 2 NM_033474 refGene chr16 18012617 - 52029 graph_last l 28 66 caaaccacta 1179 0.734826055872009 0.166666666666667 1 6 1 2 caaaggttaa 1180 0.734826055872009 0.166666666666667 1 6 1 2 caaattaacc 1181 0.734826055872009 Inf 10 0 12 0 AW122360 all_est chr14 71016895 + 43033 graph_last l 10 22 caaattcctc 1182 0.734826055872009 0.166666666666667 1 6 1 2 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 1183 0.734826055872009 Inf 10 0 12 0 genomic chr4 115609301 - 0 unique_long l 2 5 caaccctccc 1184 0.734826055872009 0.166666666666667 1 6 1 2 NM_029572 refGene chr4 47808889 - 93063 graph_last 1 7 caagcggaag 1185 0.734826055872009 0.166666666666667 1 6 1 2 NM_009965 refGene chr11 77287082 - 21860 graph_last l 3 13 caaggcacac 1186 0.734826055872009 0.166666666666667 1 6 1 2 AA388134 all_est chr8 83911423 + 131702 graph_last l 7 19 caatctacaa 1187 0.734826055872009 0.166666666666667 1 6 1 2 cacaaataaa 1188 0.734826055872009 0.166666666666667 1 6 1 2 cacaaggccc 1189 0.734826055872009 0.166666666666667 1 6 1 2 genomic chrX 132063425 - 0 unique_long l 5 13 cacaatccat 1190 0.734826055872009 0.166666666666667 1 6 1 2 caccaccggt 1191 0.734826055872009 0.166666666666667 1 6 1 2 caccccagtc 1192 0.734826055872009 0.166666666666667 1 6 1 2 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 1193 0.734826055872009 Inf 10 0 13 0 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 1194 0.734826055872009 2 40 20 50 7 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 1195 0.734826055872009 2.28571428571429 32 14 40 5 NM_175143 refGene chr9 111179378 + 141397 graph_last l 4 10 cactgaggtg 1196 0.734826055872009 0.166666666666667 1 6 1 2 NM_199446 refGene chr8 86956517 + 131989 graph_last l 6 14 cagaaagagt 1197 0.734826055872009 0.166666666666667 1 6 1 2 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 1198 0.734826055872009 0.222222222222222 2 9 3 3 BC030909 all_mrna chr16 4782050 + 51185 graph_second 1 12 cagacaccaa 1199 0.734826055872009 0.166666666666667 1 6 1 2 cagactcagg 1200 0.734826055872009 0.166666666666667 1 6 1 2 AK083408 knownGene chr9 106733089 + 141052 graph_last 0 3 cagcccctgg 1201 0.734826055872009 0.166666666666667 1 6 1 2 NM_007595 refGene chr11 5909742 - 17440 graph_last 0 15 cagctggggg 1202 0.734826055872009 0.166666666666667 1 6 1 2 caggaaagct 1203 0.734826055872009 0.333333333333333 4 12 5 4 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 1204 0.734826055872009 0.222222222222222 2 9 3 3 caggaggcag 1205 0.734826055872009 0.166666666666667 1 6 1 2 caggctaaac 1206 0.734826055872009 0.166666666666667 1 6 1 2 AK084677 all_mrna chr10 8658989 - 10203 graph_last 0 7 caggctcaca 1207 0.734826055872009 0.166666666666667 1 6 1 2 NM_009438 refGene chr7 38103462 + 120755 graph_last 1 8 caggtggtgc 1208 0.734826055872009 0.166666666666667 1 6 1 2 cagtacaaat 1209 0.734826055872009 0.222222222222222 2 9 3 3 NM_013525 refGene chr1 164605371 + 7804 graph_last l 31 97 cagtgactgc 1210 0.734826055872009 Inf 10 0 12 0 NM_008942 refGene chr11 96789914 - 23504 graph_last l 26 58 cataagaggt 1211 0.734826055872009 0.222222222222222 2 9 3 3 BM570588 all_est chrX 118503773 + 151346 graph_last 3 6 cataatgtag 1212 0.734826055872009 0.166666666666667 1 6 1 2 catcagtcat 1213 0.734826055872009 0.166666666666667 1 6 1 2 NM_172463 refGene chr1 95249248 - 4797 graph_last l 6 18 catctgagga 1214 0.734826055872009 0.166666666666667 1 6 1 2 NM_133722 refGene chr7 76354571 - 122669 graph_last 1 7 cattgaagaa 1215 0.734826055872009 0.166666666666667 1 6 1 2 cattgctttt 1216 0.734826055872009 0.166666666666667 1 6 1 2 NM_007462 refGene chr18 34531487 + 63749 graph_second l 15 22 ccaaaaaaga 1217 0.734826055872009 0.166666666666667 1 6 1 2 ccaaaccaaa 1218 0.734826055872009 0.166666666666667 1 6 1 2 ccaaacgtgt 1219 0.734826055872009 Inf 10 0 12 0 NM_183178 refGene chr17 55924524 + 60186 graph_last l 8 37 ccaacaactg 1220 0.734826055872009 0.222222222222222 2 9 3 3 NM_027915 refGene chr11 82965096 + 22353 graph_last l 41 89 ccaagcttga 1221 0.734826055872009 0.333333333333333 4 12 5 4 ccaagtggag 1222 0.734826055872009 0.166666666666667 1 6 1 2 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 1223 0.734826055872009 0.411764705882353 7 17 9 6 BB825602 all_est chr6 39249470 - 111946 graph_last 0 35 ccaccactgg 1224 0.734826055872009 0.166666666666667 1 6 1 2 NM_013662 refGene chr17 56051344 - 60197 graph_last l 18 51 ccacgtggcc 1225 0.734826055872009 0.222222222222222 2 9 3 3 ccagaaatta 1226 0.734826055872009 0.166666666666667 1 6 1 2 NM_145130 refGene chr6 126639248 + 116885 graph_last l 14 119 ccaggaattc 1227 0.734826055872009 5 15 3 19 1 NM_178392 refGene chr12 69903706 + 28896 graph_last l 13 23 ccataggcca 1228 0.734826055872009 0.166666666666667 1 6 1 2 NM_178060 refGene chr11 98348447 + 23676 graph_last l 25 69 ccatcttgac 1229 0.734826055872009 0.352941176470588 6 17 8 6 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 1230 0.734826055872009 0.411764705882353 7 17 9 6 cccagcctaa 1231 0.734826055872009 0.166666666666667 1 6 1 2 cccagctcca 1232 0.734826055872009 0.166666666666667 1 6 1 2 NM_019632 refGene chr2 149090498 - 80110 graph_last l 39 131 cccgtgacct 1233 0.734826055872009 0.222222222222222 2 9 3 3 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 1234 0.734826055872009 1.51923076923077 79 52 99 18 NM_172948 refGene chr11 116492226 + 25261 graph_last l 15 54 ccctcctcca 1235 0.734826055872009 0.478260869565217 11 23 14 8 NM_027629 refGene chr7 92444160 + 123455 graph_last l 8 29 ccgaaggttc 1236 0.734826055872009 0.166666666666667 1 6 1 2 NM_021420 refGene chr2 164668293 - 81249 graph_last l 7 38 ccgccaaggg 1237 0.734826055872009 0.166666666666667 1 6 1 2 NM_010162 refGene chr15 54179311 - 46921 graph_last l 19 43 ccgctgatcc 1238 0.734826055872009 0.166666666666667 1 6 1 2 NM_027617 refGene chr3 150382493 - 90215 graph_last 0 7 cctactcatt 1239 0.734826055872009 0.166666666666667 1 6 1 2 genomic chr13 37956715 + 0 unique_long l 14 34 cctctgatgc 1240 0.734826055872009 0.222222222222222 2 9 3 3 cctgaagatg 1241 0.734826055872009 0.166666666666667 1 6 1 2 NM_025954 refGene chr17 24066635 + 57798 graph_last l 9 22 cctgaagctg 1242 0.734826055872009 0.166666666666667 1 6 1 2 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 1243 0.734826055872009 0.352941176470588 6 17 8 6 cctgggcacc 1244 0.734826055872009 Inf 10 0 13 0 NM_177762 refGene chr6 88426957 + 114661 graph_last l 3 17 cctgtatggg 1245 0.734826055872009 0.166666666666667 1 6 1 2 cctgtcacat 1246 0.734826055872009 0.166666666666667 1 6 1 2 NM_178111 refGene chr2 156014975 + 80642 graph_last l 26 73 cctgtgtatg 1247 0.734826055872009 0.166666666666667 1 6 1 2 BC043038 knownGene chr2 21127273 - 72547 graph_last l 24 91 cctgtgtgca 1248 0.734826055872009 4.66666666666667 14 3 18 1 NM_007638 refGene chr6 86813362 - 114502 graph_last l 24 80 ccttattgtg 1249 0.734826055872009 0.352941176470588 6 17 8 6 cctttagttc 1250 0.734826055872009 0.166666666666667 1 6 1 2 NM_199151 refGene chr9 72494658 + 139089 graph_last l 15 90 cgactctgtt 1251 0.734826055872009 5 15 3 19 1 NM_011308 refGene chr11 61889224 - 20613 graph_last 7 31 cgccccatct 1252 0.734826055872009 0.333333333333333 4 12 5 4 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 1253 0.734826055872009 0.711111111111111 64 90 80 31 NM_016967 refGene chr16 92582327 + 55982 graph_last 3 102 cgcgctccct 1254 0.734826055872009 0.166666666666667 1 6 1 2 NM_007835 refGene chr6 84323318 + 114272 graph_last l 44 213 cgcggcaggc 1255 0.734826055872009 3.16666666666667 19 6 24 2 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 1256 0.734826055872009 1.84615384615385 48 26 60 9 BC056498 knownGene chr7 134061373 + 126130 graph_last b 31 160 cggattcgca 1257 0.734826055872009 2.77777777777778 25 9 31 3 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 1258 0.734826055872009 0.222222222222222 2 9 3 3 NM_009876 refGene chr7 135531689 - 126263 graph_last 2 36 cgtggatccc 1259 0.734826055872009 Inf 10 0 12 0 NM_028835 refGene chr6 116538523 + 116215 graph_second 0 176 ctaaaaaaaa 1260 0.734826055872009 Inf 10 0 12 0 NM_026139 refGene chrX 123295619 - 151475 graph_last l 29 56 ctaaagaaac 1261 0.734826055872009 0.222222222222222 2 9 3 3 NM_030225 refGene chr12 81129920 - 29823 graph_last l 7 14 ctaccagtgg 1262 0.734826055872009 0.166666666666667 1 6 1 2 ctacgttctc 1263 0.734826055872009 5 15 3 19 1 NM_177561 refGene chr5_random 22728668 + 109447 graph_second l 5 13 ctactgtaac 1264 0.734826055872009 0.166666666666667 1 6 1 2 ctaggcaaac 1265 0.734826055872009 0.166666666666667 1 6 1 2 NM_016903 refGene chr14 66316418 + 42711 graph_last l 57 194 ctcctgcagc 1266 0.734826055872009 2.66666666666667 24 9 30 3 NM_025351 refGene chr6 90834203 - 114882 graph_last b 56 105 ctcgagaaac 1267 0.734826055872009 0.333333333333333 4 12 5 4 NM_028194 refGene chr5 72743176 - 103784 graph_last l 6 13 ctctgagaag 1268 0.734826055872009 0.222222222222222 2 9 3 3 ctctgatgtg 1269 0.734826055872009 0.222222222222222 2 9 3 3 AK122307 knownGene chr11 102139984 - 24096 graph_last l 14 27 ctctggccgc 1270 0.734826055872009 0.166666666666667 1 6 1 2 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 1271 0.734826055872009 2.77777777777778 25 9 31 3 ctcttggctg 1272 0.734826055872009 4.66666666666667 14 3 18 1 NM_025434 refGene chr3 8973474 - 82960 graph_last l 7 27 ctgagacact 1273 0.734826055872009 0.166666666666667 1 6 1 2 NM_023465 refGene chr4 147658869 + 99296 graph_last l 13 28 ctgaggaaga 1274 0.734826055872009 0.333333333333333 4 12 5 4 AK005178 knownGene chr15 83817343 + 48774 graph_last l 23 74 ctgcacttcc 1275 0.734826055872009 0.166666666666667 1 6 1 2 NM_008568 refGene chr5 136636318 - 107939 graph_last l 5 49 ctgcactttt 1276 0.734826055872009 4.66666666666667 14 3 18 1 genomic chr2 127510118 - 0 unique_long l 2 13 ctgcaggcct 1277 0.734826055872009 0.222222222222222 2 9 3 3 NM_028036 refGene chr18 36854954 - 64013 graph_last 0 30 ctgccctcca 1278 0.734826055872009 0.166666666666667 1 6 1 2 genomic chr5 148613610 + 0 unique_long l 9 16 ctggacaggc 1279 0.734826055872009 0.166666666666667 1 6 1 2 NM_013514 refGene chr14 62156344 - 42537 graph_last l 146 324 ctgggagggg 1280 0.734826055872009 0.333333333333333 4 12 5 4 NM_009760 refGene chr7 130790036 - 125863 graph_last l 54 88 ctgtatatat 1281 0.734826055872009 0.166666666666667 1 6 1 2 BF165174 all_est chr4 93990433 - 95085 graph_last l 10 19 ctgtcaattc 1282 0.734826055872009 0.166666666666667 1 6 1 2 ctgtcatttg 1283 0.734826055872009 3.33333333333333 20 6 25 2 NM_134084 refGene chr14 20493077 + 39757 graph_last l 8 27 ctgttctcaa 1284 0.734826055872009 0.166666666666667 1 6 1 2 cttaaatctg 1285 0.734826055872009 0.482758620689655 14 29 18 10 AK129466 knownGene chr6 86810887 + 114500 graph_last l 11 33 cttatgcagg 1286 0.734826055872009 0.166666666666667 1 6 1 2 NM_172441 refGene chrX 140902981 - 152206 graph_last l 15 44 cttgatgctt 1287 0.734826055872009 0.166666666666667 1 6 1 2 cttgcttcca 1288 0.734826055872009 0.166666666666667 1 6 1 2 NM_011239 refGene chr16 17888859 - 52007 graph_last 0 5 cttgtccctt 1289 0.734826055872009 0.166666666666667 1 6 1 2 CF170812 all_est chr2 167511749 + 81497 graph_last l 13 34 ctttgatcag 1290 0.734826055872009 0.166666666666667 1 6 1 2 NM_008385 refGene chr4 123806814 - 97069 graph_last l 64 157 ctttgggggc 1291 0.734826055872009 0.333333333333333 4 12 5 4 NM_153056 refGene chr11 120181405 - 25596 graph_last l 8 32 gaaaagggaa 1292 0.734826055872009 0.222222222222222 2 9 3 3 NM_025382 refGene chr4 133658415 - 98024 graph_last l 5 32 gaaaattgtc 1293 0.734826055872009 0.333333333333333 4 12 5 4 AK018295 knownGene chr18_random 3638804 + 66832 graph_last l 12 59 gaaacactat 1294 0.734826055872009 0.222222222222222 2 9 3 3 NM_023324 refGene chr11 21048347 + 18098 graph_last 1 4 gaaatgtttg 1295 0.734826055872009 0.166666666666667 1 6 1 2 CF540728 all_est chr16 35052211 + 53196 graph_last l 11 58 gaaattgaaa 1296 0.734826055872009 0.166666666666667 1 6 1 2 NM_153133 refGene chr10 131093549 - 16719 graph_last 0 11 gaacacacag 1297 0.734826055872009 0.166666666666667 1 6 1 2 CD771683 all_est chr6 6542670 - 110151 graph_last l 2 5 gaacatcttc 1298 0.734826055872009 0.166666666666667 1 6 1 2 gaacttgcta 1299 0.734826055872009 0.166666666666667 1 6 1 2 gaagatgctc 1300 0.734826055872009 0.166666666666667 1 6 1 2 gaagcagggc 1301 0.734826055872009 0.166666666666667 1 6 1 2 NM_031997 refGene chr19 22001220 - 68613 graph_last 1 9 gacgaagctg 1302 0.734826055872009 0.166666666666667 1 6 1 2 NM_138583 refGene chr16 17906032 - 52011 graph_last l 25 53 gacgggtaac 1303 0.734826055872009 0.166666666666667 1 6 1 2 NM_022433 refGene chr7 132862759 - 126014 graph_last 12 31 gactcagatt 1304 0.734826055872009 0.166666666666667 1 6 1 2 gactgaatct 1305 0.734826055872009 2.41666666666667 29 12 36 4 NM_146157 refGene chr4 138248385 + 98421 graph_second 0 5 gagaagtgct 1306 0.734826055872009 0.166666666666667 1 6 1 2 NM_027407 refGene chr1 61531888 + 2778 graph_last l 6 16 gagagctttc 1307 0.734826055872009 0.166666666666667 1 6 1 2 NM_126165 refGene chr8 108578638 - 133146 graph_last l 16 52 gagaggagtg 1308 0.734826055872009 0.222222222222222 2 9 3 3 NM_010412 refGene chr11 101859712 - 24041 graph_last l 46 145 gagcaggagc 1309 0.734826055872009 3.33333333333333 20 6 25 2 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 1310 0.734826055872009 5 15 3 19 1 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 1311 0.734826055872009 2.33333333333333 28 12 35 4 gagctggtga 1312 0.734826055872009 Inf 10 0 13 0 gaggcttata 1313 0.734826055872009 Inf 10 0 12 0 gagtgattat 1314 0.734826055872009 0.478260869565217 11 23 14 8 AK077572 knownGene chr19 38237960 - 69610 graph_last l 21 51 gagtgattgt 1315 0.734826055872009 Inf 10 0 12 0 gagttttata 1316 0.734826055872009 0.166666666666667 1 6 1 2 gatcaagagg 1317 0.734826055872009 0.166666666666667 1 6 1 2 NM_011766 refGene chr15 41386574 - 46546 graph_last 0 16 gatggaataa 1318 0.734826055872009 0.16