gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_PN1.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count COUNT_PN1.TAG.count tagatatagg 1 7.963543028088e-28 0.135714285714286 38 280 50 97 tgaccccggg 2 7.286151837737e-14 5.95 238 40 311 14 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 3 3.37192269542358e-12 0.0256410256410256 2 78 3 27 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 4 1.15275417824715e-11 2.72 408 150 533 52 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 5 3.17946239385732e-10 0.130841121495327 14 107 18 37 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 6 6.80511060983659e-10 8.58823529411765 146 17 191 6 cgtctgtgga 7 7.18665446742096e-10 0.22 33 150 43 52 tgtataaaaa 8 9.64672456189217e-10 0.217687074829932 32 147 42 51 cccttcttct 9 3.22898547880598e-09 12.8888888888889 116 9 152 3 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 10 6.3846190148023e-09 0.08 6 75 8 26 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 11 8.00557088480313e-09 0.0192307692307692 1 52 1 18 agagcgaagt 12 1.22417092083027e-08 0.376923076923077 98 260 128 90 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 13 1.27194205758658e-08 0.0363636363636364 2 55 2 19 cctttaatcc 14 4.25245373956545e-08 0.44478527607362 145 326 189 113 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 15 1.17877700166711e-07 0.231404958677686 28 121 36 42 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 16 1.97273763575261e-07 0.090909090909091 6 66 8 23 tctggacgcg 17 3.43332117107496e-07 Inf 71 0 93 0 agcagcccct 18 3.92790672869565e-06 0 0 35 0 12 ggcaagcccc 19 3.93321346681171e-06 3.03125 194 64 253 22 ctgcctgccc 20 4.38771953224921e-06 0.319727891156463 47 147 62 51 gcccgggaat 21 4.65317107154001e-06 2.82666666666667 212 75 277 26 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 22 4.65317107154001e-06 0.28099173553719 34 121 44 42 ttgggccaga 23 4.65317107154001e-06 0.301470588235294 41 136 54 47 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 24 7.37979580238488e-06 0.090909090909091 5 55 7 19 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 25 1.24729259713817e-05 0.222222222222222 20 90 26 31 tctctctgtt 26 1.31943279528203e-05 0 0 32 0 11 ggtgagcctg 27 1.95014262609182e-05 7.33333333333333 88 12 115 4 agagtaatca 28 2.35123265378785e-05 0.166666666666667 11 66 14 23 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 29 8.37271282098612e-05 0.389937106918239 62 159 81 55 tgtatgtctt 30 9.35020447633929e-05 0.145454545454545 8 55 10 19 atcctggtaa 31 0.000120503675400092 0.134615384615385 7 52 9 18 ccttgctcaa 32 0.000120503675400092 0.208333333333333 15 72 20 25 cgccgccggc 33 0.000120503675400092 2.56 192 75 251 26 tcaataaagc 34 0.000173105641825924 0.217391304347826 15 69 19 24 ttgactttat 35 0.000173105641825924 0.318181818181818 35 110 46 38 gaaaatgaga 36 0.000228349734982117 Inf 47 0 62 0 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 37 0.000228349734982117 6 84 14 110 5 gtgctgaata 38 0.000228349734982117 Inf 47 0 61 0 cactgttgag 39 0.000232002169848211 0.212121212121212 14 66 18 23 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 40 0.000442609658971387 0.0625 2 32 2 11 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 41 0.000486337180797267 7.44444444444444 67 9 88 3 ttcaaagagt 42 0.000486337180797267 0.19672131147541 12 61 16 21 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 43 0.000486337180797267 0.253333333333333 19 75 25 26 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 44 0.000628983214295223 0.372881355932203 44 118 57 41 AF063095 knownGene chr12 87316486 - 30295 graph_last 12 93 cagacctcaa 45 0.000891585927769244 0.152173913043478 7 46 9 16 atggggttgg 46 0.00122597601023101 0.0857142857142857 3 35 4 12 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 47 0.00138854603755869 0.229508196721311 14 61 18 21 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 48 0.00139751786514499 0.0625 2 32 3 11 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 49 0.00142359288559744 0.41726618705036 58 139 76 48 gtggctcaca 50 0.00193398658011266 1.30854605993341 1179 901 1540 312 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 51 0.0024167779226861 1.70792079207921 345 202 451 70 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 52 0.00271308947244693 3.57692307692308 93 26 122 9 tatttgcaaa 53 0.00271308947244693 15.6666666666667 47 3 62 1 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 54 0.00287731468030097 0.114285714285714 4 35 5 12 NM_018871 refGene chr5 134736729 - 107744 graph_last l 168 546 aatgtgagtc 55 0.00302066914984732 0.321428571428571 27 84 35 29 CF585278 all_est chr12 33782179 + 27240 graph_last 7 36 gagaaactga 56 0.00319252334747228 0 0 20 0 7 tatgtcacct 57 0.00319252334747228 0.15 6 40 8 14 gaacattgca 58 0.00347658932829035 0.09375 3 32 4 11 tactcattat 59 0.00347658932829035 0.204081632653061 10 49 13 17 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 60 0.00426791253993137 8.83333333333333 53 6 69 2 NM_008696 refGene chr1 40712852 - 1780 graph_last l 7 38 ctagaagcag 61 0.00430161685831112 0.131578947368421 5 38 7 13 gcccccctct 62 0.00430161685831112 0.333333333333333 28 84 37 29 attttcagtt 63 0.00778565967766428 14 42 3 55 1 tagagactgc 64 0.00778565967766428 14 42 3 55 1 ggaagccact 65 0.00778911210748973 2.55102040816327 125 49 163 17 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 66 0.00802961644554073 0.125 4 32 5 11 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 67 0.00861589756550573 3.17241379310345 92 29 120 10 aaaaaaaaaa 68 0.00928614760310584 0.668235294117647 284 425 371 147 ccagtcctgg 69 0.0119316546536568 0.296875 19 64 25 22 ctccctcagg 70 0.0119316546536568 0 0 17 0 6 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 71 0.0119316546536568 0.209302325581395 9 43 12 15 NM_016843 refGene chr15 87130916 + 49033 graph_last l 13 32 tgaacggggc 72 0.0119316546536568 0 0 17 0 6 NM_026775 refGene chr12 81330718 - 29849 graph_last l 12 58 tgggatttat 73 0.0119316546536568 0 0 17 0 6 agactatgca 74 0.0125762206238673 0.0769230769230769 2 26 3 9 gcttttgtta 75 0.0125762206238673 0.0769230769230769 2 26 3 9 BC059845 all_mrna chr4_random 163545 + 99872 graph_last 59 175 agggccactg 76 0.0140944087192630 0.269230769230769 14 52 18 18 tgcccagtgc 77 0.0140944087192630 0.269230769230769 14 52 18 18 gtaagcaaaa 78 0.0141132636909866 3.23076923076923 84 26 110 9 NM_026769 refGene chr7 131959952 - 125952 graph_last l 32 121 cacactgcct 79 0.0144439998453064 0.0869565217391304 2 23 2 8 tttattgact 80 0.0149197503405596 0.05 1 20 1 7 aaaacagtgg 81 0.0167127599390615 0.489208633093525 68 139 89 48 aagaaaaaaa 82 0.0167127599390615 Inf 31 0 41 0 cccacaagct 83 0.0167127599390615 Inf 31 0 41 0 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 84 0.0173333471495418 4.75 57 12 75 4 aatttcccct 85 0.0177630399016656 0.232558139534884 10 43 13 15 NM_025482 refGene chr2 181400858 + 82485 graph_last l 34 183 cctctgtttg 86 0.0195926359026398 0.265306122448980 13 49 17 17 NM_026203 refGene chr10 21915572 + 10852 graph_last l 26 102 accctgctgt 87 0.020046963590966 0.137931034482759 4 29 5 10 ttttattttg 88 0.020046963590966 0.137931034482759 4 29 5 10 NM_017367 refGene chr5 94551679 - 104851 graph_last 131 360 tactgctgat 89 0.0213594003343543 7.33333333333333 44 6 58 2 taattttttt 90 0.0229239729965126 0.210526315789474 8 38 10 13 caaaaaaaaa 91 0.0236853264310543 Inf 30 0 39 0 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 92 0.0236853264310543 Inf 30 0 39 0 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 93 0.0251999467510299 0.225 9 40 12 14 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 94 0.0265780913738859 0.115384615384615 3 26 4 9 ttctgggtag 95 0.0267779543719127 0.15625 5 32 7 11 aagaggcaag 96 0.0320502212865453 3.30434782608696 76 23 99 8 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 97 0.0333878035706946 Inf 28 0 36 0 NM_007636 refGene chr10 120033751 - 16078 graph_last l 83 199 ggtctaattt 98 0.0333878035706946 Inf 28 0 36 0 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 99 0.0337038508763339 Inf 28 0 37 0 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 100 0.0337038508763339 0.0869565217391304 2 23 3 8 NM_018799 refGene chr4 128521019 + 97495 graph_last l 28 66 tctatctcag 101 0.0337038508763339 0.0869565217391304 2 23 3 8 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 102 0.0337038508763339 0.375 27 72 35 25 gtagtggaag 103 0.0353702920884321 0.210526315789474 8 38 11 13 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 104 0.0362325039368877 0.327586206896552 19 58 25 20 NM_025282 refGene chr13 81768319 + 36483 graph_last l 3 17 atcacattat 105 0.0363337878831649 0 0 14 0 5 cagaacccac 106 0.0363337878831649 3.76470588235294 64 17 84 6 ccttctgcct 107 0.0363337878831649 0 0 14 0 5 genomic chr19_random 15495638 + 0 unique_long l 1 7 gaggggcaag 108 0.0363337878831649 0 0 14 0 5 NM_146072 refGene chr16 89234221 - 55766 graph_last 2 10 gatagaggga 109 0.0363337878831649 0 0 14 0 5 NM_008060 refGene chr19 9056013 + 67898 graph_last l 3 11 gcagtgtact 110 0.0363337878831649 0 0 14 0 5 ggggttttat 111 0.0363337878831649 0 0 14 0 5 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 112 0.0363337878831649 0 0 14 0 5 NM_008113 refGene chr17 25793383 - 57991 graph_last l 42 84 tctgccagga 113 0.0363337878831649 0 0 14 0 5 tggattcatt 114 0.0363337878831649 0 0 14 0 5 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 115 0.0363337878831649 0 0 14 0 5 NM_007883 refGene chr18 20972896 + 63182 graph_last 140 717 aattcgcgga 116 0.0371124620794158 0.1 2 20 2 7 aggaaggcgg 117 0.0371124620794158 2.09375 134 64 175 22 NM_024186 refGene chr13 89915066 + 36756 graph_last l 2 19 catccggtca 118 0.0371124620794158 0.1 2 20 2 7 CA316586 all_est chr6 30663917 + 111294 graph_last l 20 85 gactcagtgg 119 0.0371124620794158 0.1 2 20 2 7 tgggttgtct 120 0.0386240350068143 1.51082251082251 349 231 456 80 aaatcctttc 121 0.040551536095525 0.359375 23 64 30 22 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 122 0.040551536095525 0.307692307692308 16 52 21 18 NM_011634 refGene chr9 110584487 + 141318 graph_last l 146 323 cctgtgggtc 123 0.040551536095525 0.1875 6 32 8 11 NM_008634 refGene chr13 97869372 + 37324 graph_last 0 16 atcaggagtg 124 0.0405663226434786 0.0588235294117647 1 17 1 6 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 125 0.0415455369961636 Inf 26 0 34 0 gtggcacaca 126 0.042989163562721 Inf 27 0 35 0 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 127 0.043893000890879 0.153846153846154 4 26 5 9 NM_007874 refGene chr18 34562364 - 63762 graph_last l 6 73 ctagggacag 128 0.043893000890879 0.153846153846154 4 26 5 9 gaaactaggt 129 0.043893000890879 0.153846153846154 4 26 5 9 NM_009389 refGene chr9 63768355 + 138375 graph_last b 8 40 tcgtcgtgcc 130 0.043893000890879 0.153846153846154 4 26 5 9 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 131 0.0442129555801992 0.327272727272727 18 55 24 19 tctgctaaag 132 0.0491694786008697 6.66666666666667 40 6 52 2 gtctgctgat 133 0.0558347474063877 2.30434782608696 106 46 139 16 gccttccaat 134 0.0571424726818499 2.65625 85 32 111 11 gccaagggtc 135 0.0575707264175842 2.72413793103448 79 29 103 10 atggctcaca 136 0.0596840829584341 Inf 24 0 32 0 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 137 0.0596840829584341 Inf 24 0 32 0 NM_010487 refGene chr9 22639791 - 135759 graph_last l 26 97 ggatggctta 138 0.0596840829584341 Inf 24 0 32 0 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 139 0.0603286000302763 0.130434782608696 3 23 4 8 aagagtcttt 140 0.063227625502443 0.21875 7 32 9 11 aaaaaattga 141 0.0682220359640777 0.228571428571429 8 35 11 12 NM_010925 refGene chr10 80555240 - 13897 graph_last l 9 108 acctgcatct 142 0.0696079729452397 0.263157894736842 10 38 13 13 cctcctccag 143 0.0696079729452397 0.263157894736842 10 38 13 13 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 144 0.0774327978827095 2.95652173913043 68 23 89 8 genomic chr10 95618767 + 0 unique_long l 44 105 tattaatatt 145 0.0801280010436228 0.192307692307692 5 26 6 9 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 146 0.0802667549186286 0.1 2 20 3 7 AK030708 knownGene chr10 86847504 - 14428 graph_last l 5 42 tacccttgcc 147 0.0802667549186286 0.1 2 20 3 7 NM_025548 refGene chr7 24142854 - 119914 graph_last 20 67 tatgtaggac 148 0.0802667549186286 0.1 2 20 3 7 tgttaagaag 149 0.0802667549186286 0.1 2 20 3 7 NM_175162 refGene chr8 47049163 - 129791 graph_last 25 63 ttgtatatgt 150 0.0802667549186286 0.1 2 20 3 7 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 151 0.0909689663877535 0.206896551724138 6 29 8 10 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 152 0.0909689663877535 0.206896551724138 6 29 8 10 gcctgtggtg 153 0.0952778461431475 0.379310344827586 22 58 29 20 tcttctcaca 154 0.0983462367727708 0.464285714285714 39 84 51 29 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 155 0.0987204266452904 0.289473684210526 11 38 14 13 NM_019699 refGene chr19 9946997 - 67959 graph_last l 31 182 agccaagaga 156 0.0987204266452904 0.289473684210526 11 38 14 13 NM_011520 refGene chr4 129500658 + 97598 graph_last b 57 223 ggcgctcgta 157 0.0987204266452904 0.289473684210526 11 38 14 13 ttatgaaatg 158 0.0987204266452904 0.257142857142857 9 35 12 12 aaattggagg 159 0.0991527499344243 0.117647058823529 2 17 2 6 CA316586 all_est chr6 30663632 + 111294 graph_last l 19 56 agaggagctg 160 0.0991527499344243 0.117647058823529 2 17 2 6 NM_007422 refGene chr1 181698653 - 8873 graph_last l 15 50 ccctcatccc 161 0.0991527499344243 0.117647058823529 2 17 2 6 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 162 0.0991527499344243 0.40625 26 64 34 22 NM_008745 refGene chr13 58919793 + 35397 graph_last l 24 60 ctgaagcccg 163 0.0991527499344243 0.117647058823529 2 17 2 6 NM_025363 refGene chr6 38635518 + 111893 graph_last l 23 88 gcaagggtga 164 0.0991527499344243 0.117647058823529 2 17 2 6 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 165 0.0991527499344243 0.117647058823529 2 17 2 6 NM_020252 refGene chr17 90850761 - 62103 graph_last l 25 76 taatgtgttg 166 0.0991527499344243 0.117647058823529 2 17 2 6 genomic chr9 69502315 - 0 unique_long l 14 46 tccagaaaat 167 0.0991527499344243 0.117647058823529 2 17 2 6 NM_009197 refGene chrX 93603418 - 150551 graph_last 2 14 aaacacagga 168 0.100353866080912 0 0 12 0 4 aaccgcgaat 169 0.100353866080912 0 0 12 0 4 NM_053207 refGene chr8 126716435 - 134382 graph_second 6 13 aagtacagcc 170 0.100353866080912 0 0 12 0 4 NM_023122 refGene chrX 154411423 - 152747 graph_last l 2 8 aatatacata 171 0.100353866080912 0 0 12 0 4 AI839905 all_est chrX 145838622 - 152391 graph_last l 12 31 acagtgcatt 172 0.100353866080912 0 0 12 0 4 NM_018815 refGene chr6 92559047 + 114978 graph_last 0 8 agaaggaggg 173 0.100353866080912 0.0714285714285714 1 14 1 5 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 174 0.100353866080912 0.381818181818182 21 55 27 19 NM_025740 refGene chr11 29119939 - 18514 graph_last l 19 106 atgagtctgt 175 0.100353866080912 0.173913043478261 4 23 5 8 cactttactt 176 0.100353866080912 0.0714285714285714 1 14 1 5 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 177 0.100353866080912 0.0714285714285714 1 14 1 5 cgcaacttgg 178 0.100353866080912 0 0 12 0 4 NM_175012 refGene chr18 66101013 + 65570 graph_last b 6 16 cgcggctcgg 179 0.100353866080912 0 0 12 0 4 cgctggttcc 180 0.100353866080912 2.23255813953488 96 43 126 15 ctgcagcggc 181 0.100353866080912 0.0714285714285714 1 14 1 5 NM_153566 refGene chr4 123811833 + 97083 graph_last l 12 28 ctggatacta 182 0.100353866080912 0.0714285714285714 1 14 1 5 NM_011670 refGene chr5_random 2620508 + 109059 graph_last 5 44 ctgggccgtg 183 0.100353866080912 0.0714285714285714 1 14 1 5 NM_010311 refGene chr10 77157835 + 13630 graph_last l 10 32 gaactccccg 184 0.100353866080912 0 0 12 0 4 NM_022997 refGene chr8 86197927 + 131907 graph_last l 4 20 gacattagat 185 0.100353866080912 0.0714285714285714 1 14 1 5 genomic chr5 134694843 + 0 unique_long l 5 12 gcaagaatag 186 0.100353866080912 0 0 12 0 4 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 187 0.100353866080912 0 0 12 0 4 NM_018763 refGene chr9 97829313 - 140418 graph_last l 27 73 gccgtgctgg 188 0.100353866080912 0 0 12 0 4 genomic chr8 55036394 - 0 unique_long l 4 11 gctacctttc 189 0.100353866080912 0 0 12 0 4 gctccctcat 190 0.100353866080912 0 0 12 0 4 NM_026481 refGene chr8 106976878 - 132961 graph_last l 26 72 gctgactctt 191 0.100353866080912 0 0 12 0 4 gcttttattt 192 0.100353866080912 0 0 12 0 4 NM_019686 refGene chr9 56661323 - 137777 graph_last l 8 24 gtatcactta 193 0.100353866080912 0.0714285714285714 1 14 1 5 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 194 0.100353866080912 0 0 12 0 4 taatatttaa 195 0.100353866080912 0 0 12 0 4 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 196 0.100353866080912 0.0714285714285714 1 14 1 5 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 197 0.100353866080912 0 0 12 0 4 NM_153545 refGene chr11 120276827 + 25607 graph_last l 50 74 tcccaggaaa 198 0.100353866080912 0.0714285714285714 1 14 1 5 NM_028207 refGene chr11 101637639 - 24017 graph_second 0 9 tccgtgggtg 199 0.100353866080912 0 0 12 0 4 AK085367 knownGene chr8 119157008 - 133821 graph_last l 14 28 tcttagttct 200 0.100353866080912 0 0 12 0 4 NM_012010 refGene chrX 83950642 + 149980 graph_last 1 7 tgaaagtggt 201 0.100353866080912 0 0 12 0 4 NM_173419 refGene chr14 53435335 - 41872 graph_last l 6 13 tgattttgag 202 0.100353866080912 0 0 12 0 4 NM_133791 refGene chr8 47689575 - 129872 graph_last l 3 19 tgcccggtgt 203 0.100353866080912 0.0714285714285714 1 14 1 5 ttatttttag 204 0.100353866080912 0 0 12 0 4 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 205 0.100353866080912 0 0 12 0 4 NM_145614 refGene chr9 52671516 - 137570 graph_last l 5 37 ttttcagtgt 206 0.100353866080912 0 0 12 0 4 NM_175153 refGene chr9 67378684 + 138630 graph_last 1 19 tttttaaatg 207 0.100353866080912 0.0714285714285714 1 14 1 5 gaggctcaca 208 0.102192114415796 Inf 22 0 29 0 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 209 0.102192114415796 Inf 22 0 29 0 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 210 0.102684218474361 0.192307692307692 5 26 7 9 AK080973 knownGene chr4 74397681 - 94336 graph_last l 26 94 gagtctcttc 211 0.102684218474361 0.192307692307692 5 26 7 9 tagggcaatc 212 0.102684218474361 3 60 20 79 7 tggatcagtc 213 0.103124977761016 1.82716049382716 148 81 193 28 NM_009308 refGene chr18 31774468 + 63593 graph_last l 12 50 gaacctgtgg 214 0.110580197911868 0.241379310344828 7 29 9 10 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 215 0.110580197911868 0.241379310344828 7 29 9 10 NM_145385 refGene chr6 126864632 + 116927 graph_last l 150 428 gtcctataag 216 0.111675478399840 0.3 12 40 16 14 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 217 0.111717470081757 0.285714285714286 10 35 13 12 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 218 0.111717470081757 0.285714285714286 10 35 13 12 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 219 0.112059537671476 0.25 8 32 11 11 NM_029570 refGene chr3 36808028 + 84223 graph_last l 7 37 cttcaacctg 220 0.122371492147257 0.15 3 20 4 7 gcctatccaa 221 0.122371492147257 0.15 3 20 4 7 NM_017469 refGene chr3 83866801 - 86251 graph_last l 59 125 ttaattgtgt 222 0.122371492147257 0.15 3 20 4 7 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 223 0.127890677613749 2.65384615384615 69 26 90 9 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 224 0.127890677613749 3.66666666666667 44 12 58 4 aacaatttgg 225 0.130053385639033 1.93442622950820 118 61 154 21 NM_008065 refGene chr16 86134860 + 55647 graph_last 65 333 aattagttgt 226 0.133251914749107 0.413793103448276 24 58 31 20 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 227 0.14281668706965 5.66666666666667 34 6 44 2 tgaaataaac 228 0.14281668706965 5.5 33 6 43 2 acagtgggga 229 0.142986587322214 Inf 20 0 26 0 ctgagcaaca 230 0.142986587322214 Inf 20 0 26 0 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 231 0.142986587322214 Inf 20 0 26 0 gattccgtga 232 0.143167532839269 1.71739130434783 158 92 207 32 NM_010267 refGene chr1 17332941 + 648 graph_last l 33 76 cagagtgtct 233 0.143470940039929 0.217391304347826 5 23 6 8 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 234 0.143470940039929 0.217391304347826 5 23 6 8 NM_026023 refGene chr11 40360087 + 19152 graph_last 2 83 gaaaaatatt 235 0.143470940039929 0.217391304347826 5 23 6 8 gccaagtgga 236 0.143470940039929 1.63716814159292 185 113 242 39 gggtaggggt 237 0.143470940039929 0.217391304347826 5 23 6 8 acatcataga 238 0.144118204845327 0.466666666666667 35 75 46 26 NM_025974 refGene chr9 122956983 + 142184 graph_last l 115 326 aaggcaaaga 239 0.144428115165644 0.381818181818182 21 55 28 19 tcttctaatc 240 0.156461088752704 0.230769230769231 6 26 8 9 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 241 0.157205240899142 9.33333333333333 28 3 36 1 gaggagggtg 242 0.157205240899142 9.33333333333333 28 3 36 1 ctgcatcgtt 243 0.162674286704273 0.387755102040816 19 49 25 17 NM_008729 refGene chr15 31786949 - 46004 graph_last l 24 59 gtcactcaac 244 0.164332359954591 0.117647058823529 2 17 3 6 NM_010698 refGene chr5 43614163 + 102391 graph_last l 19 63 taaagacaca 245 0.164332359954591 0.117647058823529 2 17 3 6 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 246 0.164332359954591 0.117647058823529 2 17 3 6 ttacagaaat 247 0.164332359954591 0.117647058823529 2 17 3 6 NM_013876 refGene chr4 108313676 - 96057 graph_last l 24 76 tttaaattgt 248 0.164332359954591 0.117647058823529 2 17 3 6 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 249 0.164332359954591 0.117647058823529 2 17 3 6 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 250 0.168092935590321 2.28571428571429 80 35 104 12 ggatggggag 251 0.171676264258206 2.9 58 20 76 7 agaaggaggt 252 0.178517358844246 0.675324675324675 156 231 204 80 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 253 0.179684162802785 2.34375 75 32 98 11 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 254 0.179684162802785 2.34375 75 32 98 11 NM_178060 refGene chr11 98352551 + 23676 graph_last l 413 1055 tctgtagccc 255 0.187175686004918 0.598591549295775 85 142 111 49 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 256 0.187717701346231 5.16666666666667 31 6 41 2 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 257 0.187717701346231 5.16666666666667 31 6 41 2 gtggctcata 258 0.187896676931413 5.33333333333333 32 6 42 2 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 259 0.197379272319731 0.522222222222222 47 90 62 31 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 260 0.197610996294065 Inf 19 0 25 0 NM_130863 refGene chr19_random 15495020 - 71388 graph_last l 31 106 accccttgtg 261 0.197610996294065 0.2 4 20 5 7 NM_011650 refGene chr1 120849495 - 5532 graph_last l 16 72 agcattggcg 262 0.197610996294065 Inf 19 0 25 0 NM_021273 refGene chr12 107236798 - 31356 graph_last 21 68 ccggcccaga 263 0.197610996294065 Inf 19 0 25 0 cctgaatgac 264 0.197610996294065 0.2 4 20 5 7 ctgccccaca 265 0.197610996294065 Inf 18 0 24 0 gtagctcaca 266 0.197610996294065 Inf 19 0 25 0 gtgactcaca 267 0.197610996294065 Inf 19 0 25 0 gtgccatatt 268 0.197610996294065 Inf 18 0 24 0 gtggcttaca 269 0.197610996294065 Inf 18 0 24 0 CA316586 all_est chr6 30666721 + 111294 graph_last l 30 123 tacttacaag 270 0.197610996294065 0.2 4 20 5 7 NM_009861 refGene chr4 136101390 - 98237 graph_last l 29 75 tatctgctta 271 0.197610996294065 0.2 4 20 5 7 atactgaagc 272 0.197835733866918 0.557692307692308 58 104 76 36 aaataaaaca 273 0.204883882623105 0.142857142857143 2 14 2 5 NM_016698 refGene chr5 114291683 - 106212 graph_last l 30 80 aaattggaca 274 0.204883882623105 0.275862068965517 8 29 11 10 acacagaaac 275 0.204883882623105 0.217391304347826 5 23 7 8 NM_177681 refGene chr5 142074881 + 108282 graph_last 0 15 acgacagaag 276 0.204883882623105 0.142857142857143 2 14 2 5 NM_008634 refGene chr13 97870964 + 37324 graph_last 20 91 acttcaatat 277 0.204883882623105 0.275862068965517 8 29 11 10 NM_144846 refGene chr15 65243265 - 47497 graph_last l 13 52 agaaaagtat 278 0.204883882623105 0.142857142857143 2 14 2 5 ataatggata 279 0.204883882623105 4.22222222222222 38 9 49 3 cacagctctg 280 0.204883882623105 0.142857142857143 2 14 2 5 genomic chr12 95770479 - 0 unique_long l 21 70 caggattcct 281 0.204883882623105 0.142857142857143 2 14 2 5 caggcccttg 282 0.204883882623105 0.142857142857143 2 14 2 5 NM_010828 refGene chr10 18446012 + 10611 graph_last s 1 20 cccgcctcgg 283 0.204883882623105 0.142857142857143 2 14 2 5 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 284 0.204883882623105 0.217391304347826 5 23 7 8 NM_133348 refGene chr4 150384877 + 99558 graph_last l 102 304 gacaccagag 285 0.204883882623105 0.275862068965517 8 29 11 10 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 286 0.204883882623105 8.66666666666667 26 3 34 1 gtcacaccac 287 0.204883882623105 0.275862068965517 8 29 11 10 NM_023122 refGene chrX 154409033 + 152747 graph_last l 28 172 gttggctcct 288 0.204883882623105 0.217391304347826 5 23 7 8 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 289 0.204883882623105 8.66666666666667 26 3 34 1 NM_010017 refGene chr9 110841045 - 141352 graph_last l 21 70 tagagaggag 290 0.204883882623105 0.142857142857143 2 14 2 5 NM_010837 refGene chr7 90820373 - 123299 graph_last l 2 16 tagtgctccc 291 0.204883882623105 0.142857142857143 2 14 2 5 ttcattctta 292 0.204883882623105 0.142857142857143 2 14 2 5 ttggctgccc 293 0.204883882623105 2.125 85 40 111 14 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 294 0.204883882623105 0.342105263157895 13 38 17 13 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 295 0.207756732842828 0.269230769230769 7 26 9 9 BC009091 knownGene chr19_random 7285586 - 71199 graph_last 1 5 aaaaagactc 296 0.217772290268782 0 0 9 0 3 aaaaagggtt 297 0.217772290268782 0 0 9 0 3 BX514180 all_est chr10 44079063 - 11989 graph_last 0 3 aaatttaaag 298 0.217772290268782 0 0 9 0 3 AK122236 knownGene chr12 108304804 + 31448 graph_last 8 42 aaatttgttc 299 0.217772290268782 0 0 9 0 3 aacccagagc 300 0.217772290268782 0 0 9 0 3 aagaatgtag 301 0.217772290268782 0.176470588235294 3 17 4 6 aagagaaacc 302 0.217772290268782 0.176470588235294 3 17 4 6 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 303 0.217772290268782 8 24 3 31 1 genomic chr5 135975983 + 0 unique_long l 2 6 aaggcaagta 304 0.217772290268782 0 0 9 0 3 aatataagag 305 0.217772290268782 0.0833333333333333 1 12 1 4 NM_026729 refGene chr11 114916501 + 25076 graph_last l 7 62 aatcactggc 306 0.217772290268782 0.0833333333333333 1 12 1 4 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 307 0.217772290268782 0 0 9 0 3 aatttcttgg 308 0.217772290268782 0 0 9 0 3 NM_013635 refGene chr12 27668053 + 26961 graph_last l 32 64 acaaagtgtc 309 0.217772290268782 0.0833333333333333 1 12 1 4 acaacaataa 310 0.217772290268782 0 0 9 0 3 NM_153595 refGene chr10 89036907 + 14566 graph_last 19 42 acaagatttt 311 0.217772290268782 0.0833333333333333 1 12 1 4 NM_013540 refGene chr3 82528196 - 86190 graph_last l 7 21 acactttctt 312 0.217772290268782 0.176470588235294 3 17 4 6 NM_009898 refGene chr7_random 46673618 + 127457 graph_last 17 51 acagtgccta 313 0.217772290268782 0.176470588235294 3 17 4 6 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 314 0.217772290268782 8 24 3 32 1 actataacca 315 0.217772290268782 0 0 9 0 3 AK005167 knownGene chr7 24244951 + 119924 graph_last l 55 397 actcctgtcc 316 0.217772290268782 0.492753623188406 34 69 44 24 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 317 0.217772290268782 8 24 3 32 1 agcttgcctt 318 0.217772290268782 0 0 9 0 3 AI854083 all_est chr6 36936378 - 111753 graph_last l 2 10 ataagcttga 319 0.217772290268782 0 0 9 0 3 ataggcaaaa 320 0.217772290268782 0.0833333333333333 1 12 1 4 atgagaatgg 321 0.217772290268782 0.0833333333333333 1 12 1 4 AU255304 all_est chr7 54329684 - 121521 graph_last l 4 14 atgtactctt 322 0.217772290268782 0 0 9 0 3 atgtctctgt 323 0.217772290268782 0.0833333333333333 1 12 1 4 AK038042 knownGene chr11 115842027 - 25204 graph_last l 10 62 attcttaaaa 324 0.217772290268782 0.0833333333333333 1 12 1 4 attgagaaca 325 0.217772290268782 0 0 9 0 3 NM_173439 refGene chr16 31943821 - 52908 graph_last l 5 21 attgctgtat 326 0.217772290268782 0 0 9 0 3 genomic chr4 153978639 - 0 unique_long l 3 7 attgggtata 327 0.217772290268782 0 0 9 0 3 NM_011522 refGene chr17 24278928 - 57816 graph_last l 31 63 attgtgtatt 328 0.217772290268782 0.0833333333333333 1 12 1 4 NM_145553 refGene chr4 131785171 + 97804 graph_last 0 20 atttaaaaaa 329 0.217772290268782 0 0 9 0 3 NM_022410 refGene chr15 79105966 + 48274 graph_last l 8 30 atttgactgg 330 0.217772290268782 0.0833333333333333 1 12 1 4 NM_178119 refGene chr1 91822089 + 4551 graph_last l 4 21 attttacgtt 331 0.217772290268782 0 0 9 0 3 caaaacatac 332 0.217772290268782 0 0 9 0 3 NM_026211 refGene chr13 55372901 + 35178 graph_last l 17 61 caaacgacta 333 0.217772290268782 0.0833333333333333 1 12 1 4 AY255603 knownGene chr9 109276396 - 141189 graph_last l 7 21 caaaggtgct 334 0.217772290268782 0 0 9 0 3 NM_010411 refGene chr18 38054458 - 64117 graph_last l 53 97 caaggtgaac 335 0.217772290268782 0.25 5 20 6 7 cactcctaag 336 0.217772290268782 0 0 9 0 3 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 337 0.217772290268782 0 0 9 0 3 NM_010864 refGene chr9 77758330 + 139524 graph_last l 8 16 catatattca 338 0.217772290268782 0 0 9 0 3 catccacaag 339 0.217772290268782 0 0 9 0 3 NM_177581 refGene chr5_random 18880823 + 109360 graph_last l 3 10 cattaacctt 340 0.217772290268782 0 0 9 0 3 NM_019978 refGene chr3 56887987 + 85071 graph_last l 4 11 ccaagttggc 341 0.217772290268782 0.0833333333333333 1 12 1 4 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 342 0.217772290268782 0.368421052631579 14 38 18 13 NM_177751 refGene chrX 145856339 - 152396 graph_last l 18 32 ccaggcttta 343 0.217772290268782 0 0 9 0 3 genomic chr2 131320194 - 0 unique_long l 14 62 ccatcagtgg 344 0.217772290268782 0.176470588235294 3 17 4 6 cccacaaagg 345 0.217772290268782 0 0 9 0 3 NM_019831 refGene chrX 91306980 - 150325 graph_last l 22 69 cccacccttg 346 0.217772290268782 0.25 5 20 6 7 NM_145556 refGene chr4 146738309 + 99182 graph_last 0 5 cccctggaaa 347 0.217772290268782 0 0 9 0 3 genomic chr7 52539336 + 0 unique_long l 4 15 ccgcttggac 348 0.217772290268782 0 0 9 0 3 cctcactgga 349 0.217772290268782 0 0 9 0 3 cctgtctccc 350 0.217772290268782 0 0 9 0 3 NM_020009 refGene chr4 146670510 + 99166 graph_last l 13 33 cggggccaca 351 0.217772290268782 0 0 9 0 3 ctagtctttg 352 0.217772290268782 0.708171206225681 182 257 238 89 ctcaataaat 353 0.217772290268782 0.0833333333333333 1 12 1 4 NM_011791 refGene chr8 24662200 - 128728 graph_last 0 14 ctcagacagc 354 0.217772290268782 0 0 9 0 3 NM_008538 refGene chr10 38262715 + 11621 graph_last 0 25 ctggcttctt 355 0.217772290268782 0.176470588235294 3 17 4 6 NM_031404 refGene chr5 135974053 + 107867 graph_last l 15 82 gaacgcaagt 356 0.217772290268782 0.3125 10 32 13 11 AA073739 all_est chr19 8897935 + 67877 graph_last l 10 47 gaagccagcc 357 0.217772290268782 0 0 9 0 3 gactctggct 358 0.217772290268782 0 0 9 0 3 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 359 0.217772290268782 Inf 17 0 22 0 NM_029555 refGene chr6 42357963 + 112149 graph_second 0 12 gagcaaccag 360 0.217772290268782 0 0 9 0 3 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 361 0.217772290268782 Inf 17 0 22 0 NM_016863 refGene chr12 4873131 - 26045 graph_last l 4 18 gagggacttg 362 0.217772290268782 0 0 9 0 3 gagtttagag 363 0.217772290268782 0 0 9 0 3 gatgaacccc 364 0.217772290268782 0 0 9 0 3 NM_009746 refGene chr7 119758378 - 125247 graph_last 1 8 gatttcgtat 365 0.217772290268782 0.0833333333333333 1 12 1 4 NM_025388 refGene chr1 174972698 - 8448 graph_last 53 122 gccctggggc 366 0.217772290268782 0.0833333333333333 1 12 1 4 NM_153413 refGene chr9 109513400 + 141212 graph_last 2 11 gcctgagcac 367 0.217772290268782 0 0 9 0 3 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 368 0.217772290268782 Inf 17 0 22 0 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 369 0.217772290268782 0.418604651162791 18 43 23 15 AA896727 all_est chr3 54020885 + 84913 graph_last 1 31 gctccaagga 370 0.217772290268782 0 0 9 0 3 gctgggaggt 371 0.217772290268782 0 0 9 0 3 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 372 0.217772290268782 0.0833333333333333 1 12 1 4 ggaggtgtct 373 0.217772290268782 0 0 9 0 3 ggcctgaggc 374 0.217772290268782 Inf 18 0 23 0 AK045826 knownGene chr19 6624527 + 67692 graph_last l 87 261 ggctccctgc 375 0.217772290268782 0.3125 10 32 13 11 ggctgctctg 376 0.217772290268782 Inf 17 0 22 0 ggcttcggtc 377 0.217772290268782 1.49019607843137 228 153 298 53 gggaaactaa 378 0.217772290268782 0.0833333333333333 1 12 1 4 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 379 0.217772290268782 0 0 9 0 3 NM_028950 refGene chr2 14998028 - 72176 graph_last 0 6 gtgaagtcag 380 0.217772290268782 0 0 9 0 3 gtgacagttt 381 0.217772290268782 0 0 9 0 3 gtgacctggc 382 0.217772290268782 0.0833333333333333 1 12 1 4 NM_153166 refGene chr17 28788461 - 58335 graph_last l 11 32 gtgatagtga 383 0.217772290268782 0 0 9 0 3 NM_145596 refGene chr8 70109811 + 130866 graph_last 0 5 gtggcacact 384 0.217772290268782 0 0 9 0 3 AI838513 all_est chr1 137208174 - 6402 graph_last l 8 29 gtgtggccct 385 0.217772290268782 0.0833333333333333 1 12 1 4 NM_175212 refGene chr15 59927760 + 47233 graph_last l 39 85 taaactgggt 386 0.217772290268782 0.0833333333333333 1 12 1 4 taaataaaga 387 0.217772290268782 0.176470588235294 3 17 4 6 taaattggat 388 0.217772290268782 0 0 9 0 3 NM_144811 refGene chr15 81177041 + 48470 graph_last 0 7 taataaagaa 389 0.217772290268782 0 0 9 0 3 NM_019406 refGene chr2 31298595 - 73309 graph_last l 58 96 taattaaatg 390 0.217772290268782 0 0 9 0 3 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 391 0.217772290268782 0.0833333333333333 1 12 1 4 NM_025402 refGene chr11 120775513 + 25666 graph_last l 37 68 tagagcttta 392 0.217772290268782 0 0 9 0 3 tatacctgta 393 0.217772290268782 0 0 9 0 3 tatatacata 394 0.217772290268782 0.25 5 20 6 7 NM_007458 refGene chr7 37839274 - 120756 graph_second l 21 44 tatctcttct 395 0.217772290268782 0 0 9 0 3 NM_010022 refGene chr3 119882053 + 88622 graph_last l 11 18 tatctgtata 396 0.217772290268782 0 0 9 0 3 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 397 0.217772290268782 2.7 54 20 71 7 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 398 0.217772290268782 0 0 9 0 3 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 399 0.217772290268782 0.176470588235294 3 17 4 6 tccgtgggtt 400 0.217772290268782 0 0 9 0 3 NM_011352 refGene chr9 60247794 + 138104 graph_last l 7 42 tcctaactta 401 0.217772290268782 0.176470588235294 3 17 4 6 tcctgaaata 402 0.217772290268782 0.307692307692308 8 26 10 9 NM_011785 refGene chr1 180948039 + 8786 graph_last 0 3 tctaccttta 403 0.217772290268782 0 0 9 0 3 tctatttaca 404 0.217772290268782 0 0 9 0 3 NM_026700 refGene chr16 95363360 + 56182 graph_last l 11 31 tctcccttaa 405 0.217772290268782 0 0 9 0 3 NM_028475 refGene chr3 92414398 - 86875 graph_last l 4 13 tctgtcccat 406 0.217772290268782 0 0 9 0 3 tctttctttt 407 0.217772290268782 0.0833333333333333 1 12 1 4 AK034177 knownGene chr6 139815698 - 117726 graph_last l 12 24 tgaacaactt 408 0.217772290268782 0.0833333333333333 1 12 1 4 NM_198033 refGene chr2 29451283 + 73116 graph_last l 4 22 tgaataatct 409 0.217772290268782 0.0833333333333333 1 12 1 4 genomic chr1 184526032 - 0 unique_long l 6 82 tgaccttcct 410 0.217772290268782 0 0 9 0 3 NM_011627 refGene chr9 88576767 + 140001 graph_last 0 6 tgagtgcagc 411 0.217772290268782 0 0 9 0 3 NM_172787 refGene chr10 27146708 - 11123 graph_last l 6 32 tgatatgaat 412 0.217772290268782 0.0833333333333333 1 12 1 4 tgcaagaccc 413 0.217772290268782 0 0 9 0 3 BE952224 all_est chr4 124070462 + 97121 graph_last l 9 21 tggataattt 414 0.217772290268782 0 0 9 0 3 tgggctcctc 415 0.217772290268782 0 0 9 0 3 tgggtgtccc 416 0.217772290268782 0.176470588235294 3 17 4 6 tgggttgtgg 417 0.217772290268782 0.307692307692308 8 26 10 9 NM_029541 refGene chrX 124607824 + 151527 graph_last 4 30 tgtaacttac 418 0.217772290268782 0.0833333333333333 1 12 1 4 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 419 0.217772290268782 0.0833333333333333 1 12 1 4 NM_011026 refGene chr5 121977418 + 106813 graph_second 2 10 tgtgtaatcc 420 0.217772290268782 0.0833333333333333 1 12 1 4 tgtgttgaga 421 0.217772290268782 Inf 17 0 22 0 AK012697 knownGene chr5 122772560 - 106898 graph_last l 9 27 ttaatcagga 422 0.217772290268782 0 0 9 0 3 NM_152804 refGene chr13 109184589 + 38028 graph_last l 10 45 ttagagaagt 423 0.217772290268782 0 0 9 0 3 NM_138587 refGene chr6 22172879 - 110818 graph_last l 5 13 ttatggcagt 424 0.217772290268782 0 0 9 0 3 ttatgggaat 425 0.217772290268782 0 0 9 0 3 NM_173780 refGene chrX 141691790 + 152251 graph_last 1 7 ttctgtctga 426 0.217772290268782 0 0 9 0 3 BE993913 all_est chrX 84016517 - 149990 graph_second 1 1 ttgaatagat 427 0.217772290268782 0 0 9 0 3 NM_011241 refGene chr15 83217970 - 48702 graph_last 71 146 ttgggcctac 428 0.217772290268782 0.25 5 20 6 7 NM_009782 refGene chr1 157842554 - 7363 graph_last l 34 121 ttggtcaggt 429 0.217772290268782 0.307692307692308 8 26 10 9 NM_025556 refGene chr8 14593612 - 128179 graph_last l 25 66 ttgttgtggt 430 0.217772290268782 0 0 9 0 3 tttaacaaaa 431 0.217772290268782 0 0 9 0 3 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 432 0.217772290268782 0.0833333333333333 1 12 1 4 tttagtttta 433 0.217772290268782 0 0 9 0 3 tttataaaat 434 0.217772290268782 0 0 9 0 3 NM_016759 refGene chr11 102067093 - 24069 graph_last l 37 69 tttgttatag 435 0.217772290268782 0 0 9 0 3 NM_025942 refGene chr2 73487585 - 75725 graph_last l 38 80 ttttacagta 436 0.217772290268782 0.176470588235294 3 17 4 6 BC034283 knownGene chr13 92446699 - 36949 graph_last l 19 55 ttttcagtgg 437 0.217772290268782 0.0833333333333333 1 12 1 4 ttttctattt 438 0.217772290268782 0.0833333333333333 1 12 1 4 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 439 0.217772290268782 0.0833333333333333 1 12 1 4 NM_177466 refGene chr6 86719540 - 114494 graph_last l 16 60 ttttgagcac 440 0.217772290268782 0.0833333333333333 1 12 1 4 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 441 0.221323542570078 0.260869565217391 6 23 8 8 cccacaaggt 442 0.229853578372926 2.47826086956522 57 23 74 8 gaaaatatcc 443 0.238818921236366 4.66666666666667 28 6 37 2 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 444 0.247583488530087 1.15813953488372 1245 1075 1626 372 ccttgaaata 445 0.252445057335792 0.34375 11 32 14 11 tctacaagaa 446 0.252445057335792 0.568421052631579 54 95 71 33 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 447 0.269690405410824 3.77777777777778 34 9 45 3 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 448 0.286334402117698 0.142857142857143 2 14 3 5 NM_133926 refGene chr6 115093840 - 116120 graph_last 0 36 agaggggttg 449 0.286334402117698 0.142857142857143 2 14 3 5 aggaaatgag 450 0.286334402117698 0.142857142857143 2 14 3 5 atgataatgg 451 0.286334402117698 0.142857142857143 2 14 3 5 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 452 0.286334402117698 7.33333333333333 22 3 29 1 ccaagggtcc 453 0.286334402117698 0.142857142857143 2 14 3 5 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 454 0.286334402117698 0.142857142857143 2 14 3 5 cctttaatct 455 0.286334402117698 Inf 15 0 20 0 cttacatttc 456 0.286334402117698 Inf 15 0 20 0 gacagtaata 457 0.286334402117698 0.142857142857143 2 14 3 5 gccaaggcct 458 0.286334402117698 0.142857142857143 2 14 3 5 AK009092 knownGene chr5 99751450 - 105140 graph_last 29 80 gccgtgtgct 459 0.286334402117698 0.142857142857143 2 14 3 5 NM_026222 refGene chr3 34770123 + 84139 graph_last 1 26 gtgattttcc 460 0.286334402117698 0.142857142857143 2 14 3 5 gtggttcaca 461 0.286334402117698 Inf 15 0 20 0 AK052736 knownGene chr8 79829375 + 131489 graph_second 0 32 tgtactgtat 462 0.286334402117698 0.142857142857143 2 14 3 5 tgttaagatg 463 0.286334402117698 Inf 15 0 20 0 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 464 0.286334402117698 0.142857142857143 2 14 3 5 NM_008500 refGene chr2 36354993 - 73731 graph_last l 6 28 ttgtgctttg 465 0.286334402117698 0.142857142857143 2 14 3 5 genomic chr17 26602950 + 0 unique_long l 61 112 tttaataaac 466 0.286334402117698 0.142857142857143 2 14 3 5 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 467 0.287392660288081 0.425 17 40 22 14 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 468 0.287392660288081 Inf 16 0 21 0 gtggcgcaca 469 0.287392660288081 Inf 16 0 21 0 tcctcttccc 470 0.287392660288081 0.425 17 40 22 14 ttcattataa 471 0.28937103897798 1.734375 111 64 145 22 gtgaaactaa 472 0.299408751235057 1.65384615384615 129 78 168 27 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 473 0.299667273319280 0.482758620689655 28 58 37 20 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 474 0.311928175973884 0.394736842105263 15 38 19 13 atttttcttt 475 0.313903691652446 0.310344827586207 9 29 12 10 NM_025848 refGene chr9 52633577 - 137561 graph_last l 30 85 aagctcgaaa 476 0.314606693353192 0.235294117647059 4 17 5 6 NM_025542 refGene chr2 172905536 + 81856 graph_last l 10 54 acctttgtac 477 0.314606693353192 0.235294117647059 4 17 5 6 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 478 0.314606693353192 0.304347826086957 7 23 9 8 cagacggaag 479 0.314606693353192 0.235294117647059 4 17 5 6 AK003177 knownGene chr3 134325739 + 89348 graph_last 15 60 cagatttagg 480 0.314606693353192 0.235294117647059 4 17 5 6 gcagccccta 481 0.314606693353192 0.304347826086957 7 23 9 8 NM_146083 refGene chr17 80910008 - 61430 graph_last l 15 47 ggccaaagag 482 0.314606693353192 0.235294117647059 4 17 5 6 NM_016743 refGene chr15 97285350 + 49595 graph_last l 127 271 gttacgtaac 483 0.314606693353192 0.304347826086957 7 23 9 8 gtttcaagag 484 0.314606693353192 0.235294117647059 4 17 5 6 NM_011492 refGene chr10 82440175 - 14048 graph_last l 37 175 tgcacaggct 485 0.314606693353192 0.235294117647059 4 17 5 6 tgctgagatc 486 0.314606693353192 0.235294117647059 4 17 5 6 aggccaagaa 487 0.317016319866919 0.25 5 20 7 7 atacttgaca 488 0.317016319866919 0.25 5 20 7 7 NM_134044 refGene chr12 83476305 - 30013 graph_last l 8 58 cctacactcc 489 0.317016319866919 0.25 5 20 7 7 gttgtgattt 490 0.317016319866919 4.5 27 6 35 2 NM_009320 refGene chr6 93295433 + 115017 graph_last l 16 47 tattttgtgg 491 0.317016319866919 0.25 5 20 7 7 AK014046 knownGene chr11 62096350 - 20634 graph_last l 16 62 tctctgaggt 492 0.317016319866919 0.25 5 20 7 7 NM_008112 refGene chr13 3314926 + 32298 graph_last l 80 154 ttttgtttat 493 0.317016319866919 0.25 5 20 7 7 cggttgctgg 494 0.31906767286555 4.66666666666667 28 6 36 2 NM_010895 refGene chr11 97910831 - 23629 graph_last b 21 98 tacgaggagc 495 0.33828766081436 3.44444444444444 31 9 41 3 AK085367 knownGene chr8 119156583 + 133821 graph_last l 39 190 cttcggttgt 496 0.342430337286623 0.394736842105263 15 38 20 13 gactgtgcca 497 0.350200269679403 3.66666666666667 33 9 43 3 genomic chr11 68662887 - 0 unique_long l 4 14 aaaactgggg 498 0.384322656433683 0.166666666666667 2 12 2 4 NM_025808 refGene chr16 17130765 + 51924 graph_last l 20 55 aaacggtaag 499 0.384322656433683 0.166666666666667 2 12 2 4 aacgcgtgtg 500 0.384322656433683 0.166666666666667 2 12 2 4 NM_194462 refGene chr5 3973741 + 100160 graph_last 0 11 aagccgagat 501 0.384322656433683 0.166666666666667 2 12 2 4 NM_013854 refGene chr17 35652435 - 59005 graph_last l 9 26 aaggtggcgt 502 0.384322656433683 0.166666666666667 2 12 2 4 acacaataaa 503 0.384322656433683 0.166666666666667 2 12 2 4 acagtgcctg 504 0.384322656433683 7 21 3 28 1 acgctgaata 505 0.384322656433683 7 21 3 28 1 NM_009030 refGene chr4 128222925 - 97446 graph_last 68 191 actaactgtg 506 0.384322656433683 Inf 14 0 18 0 actctagcca 507 0.384322656433683 0.166666666666667 2 12 2 4 actgcagatg 508 0.384322656433683 0.166666666666667 2 12 2 4 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 509 0.384322656433683 Inf 14 0 18 0 agagttcaga 510 0.384322656433683 Inf 14 0 18 0 NM_011406 refGene chr17 82092536 - 61525 graph_last l 4 18 agccagaagc 511 0.384322656433683 0.166666666666667 2 12 2 4 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 512 0.384322656433683 7 21 3 27 1 BC048668 knownGene chr16 38124538 + 53459 graph_last l 43 170 agggcactgg 513 0.384322656433683 Inf 14 0 18 0 NM_025804 refGene chr8 125253642 + 134250 graph_last 2 24 aggggcctag 514 0.384322656433683 0.166666666666667 2 12 2 4 NM_027878 refGene chr10 90782898 + 14647 graph_last l 7 24 atctcagtag 515 0.384322656433683 0.166666666666667 2 12 2 4 caattcttta 516 0.384322656433683 0.166666666666667 2 12 2 4 NM_025382 refGene chr4 133683735 - 98024 graph_last l 3 24 cactgcttcc 517 0.384322656433683 0.166666666666667 2 12 2 4 cagaccctac 518 0.384322656433683 0.166666666666667 2 12 2 4 BY238464 all_est chr2 118967939 + 78313 graph_last l 9 29 ccgagcgagg 519 0.384322656433683 0.166666666666667 2 12 2 4 NM_010768 refGene chr10 83635026 + 14184 graph_last l 43 134 cctgggacac 520 0.384322656433683 0.166666666666667 2 12 2 4 BC049678 knownGene chr8 71178447 - 131010 graph_last l 24 83 cggctgtcgc 521 0.384322656433683 Inf 14 0 18 0 NM_009763 refGene chr5 42766418 - 102326 graph_last l 19 38 ctatttaaag 522 0.384322656433683 0.166666666666667 2 12 2 4 ctgtacgcag 523 0.384322656433683 Inf 14 0 18 0 ctgttaatac 524 0.384322656433683 0.166666666666667 2 12 2 4 AK013794 all_mrna chr7 73721823 + 122515 graph_last 2 13 cttaaacaaa 525 0.384322656433683 0.166666666666667 2 12 2 4 BY374659 all_est chr13 52272846 - 34920 graph_last l 74 162 gaaccagtta 526 0.384322656433683 0.166666666666667 2 12 2 4 AK090227 all_mrna chrX 132132840 - 151845 graph_last 2 10 gagattagtc 527 0.384322656433683 0.166666666666667 2 12 2 4 gcccaggctc 528 0.384322656433683 7 21 3 27 1 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 529 0.384322656433683 0.166666666666667 2 12 2 4 gctctgtgtc 530 0.384322656433683 0.166666666666667 2 12 2 4 genomic chr13 81769209 - 0 unique_long l 7 14 gcttagggta 531 0.384322656433683 0.166666666666667 2 12 2 4 NM_007999 refGene chr19 10130399 + 67962 graph_last 30 134 ggctttggag 532 0.384322656433683 7 21 3 28 1 gggcggagct 533 0.384322656433683 Inf 14 0 18 0 ggggctcaca 534 0.384322656433683 7 21 3 28 1 NM_182716 refGene chr1 135449108 - 6266 graph_last l 16 67 ggggtctgcc 535 0.384322656433683 Inf 14 0 18 0 ggtggctcac 536 0.384322656433683 0.166666666666667 2 12 2 4 NM_153550 refGene chr16 35427449 + 53240 graph_second 0 15 ggttctcagt 537 0.384322656433683 0.166666666666667 2 12 2 4 NM_153150 refGene chr16 17530303 - 51984 graph_last l 5 28 gtcaggtcac 538 0.384322656433683 0.166666666666667 2 12 2 4 gtcatagctg 539 0.384322656433683 Inf 14 0 18 0 gtgctcagtg 540 0.384322656433683 0.166666666666667 2 12 2 4 gtggggagcc 541 0.384322656433683 Inf 14 0 18 0 NM_028835 refGene chr6 116487900 - 116215 graph_last l 3 25 gtttgcctga 542 0.384322656433683 0.166666666666667 2 12 2 4 NM_010014 refGene chr4 103601428 + 95607 graph_last l 4 42 gtttttggca 543 0.384322656433683 Inf 14 0 18 0 NM_011130 refGene chr8 21492512 - 128541 graph_last 2 9 tatgaatgtg 544 0.384322656433683 0.166666666666667 2 12 2 4 NM_007529 refGene chr3 90072744 - 86600 graph_last l 49 205 tcagctgcct 545 0.384322656433683 0.166666666666667 2 12 2 4 genomic chr16 44061816 - 0 unique_long l 142 249 tctacacagt 546 0.384322656433683 0.166666666666667 2 12 2 4 tctgcttgga 547 0.384322656433683 0.166666666666667 2 12 2 4 NM_054072 refGene chr18 37958141 + 64094 graph_last l 118 278 tctggagaca 548 0.384322656433683 0.421052631578947 16 38 21 13 tgcaagctga 549 0.384322656433683 Inf 14 0 18 0 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 550 0.384322656433683 Inf 14 0 18 0 BC049852 knownGene chr7 15939737 + 119234 graph_last l 4 21 tgggcagcag 551 0.384322656433683 0.166666666666667 2 12 2 4 NM_182991 refGene chr8 70745352 - 130941 graph_last l 49 119 ttctgagtat 552 0.384322656433683 0.166666666666667 2 12 2 4 ttctttctaa 553 0.384322656433683 0.166666666666667 2 12 2 4 ttgacaaact 554 0.384322656433683 0.166666666666667 2 12 2 4 NM_015753 refGene chr2 45292287 - 74261 graph_last l 13 58 cacgtgcctg 555 0.385236884284396 Inf 15 0 19 0 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 556 0.385236884284396 Inf 15 0 19 0 NM_010710 refGene chr2 38632312 + 73906 graph_last l 8 51 cgcacctcct 557 0.385236884284396 Inf 15 0 19 0 gtcgcaggca 558 0.385236884284396 Inf 15 0 19 0 NM_019802 refGene chr6 73476551 - 113867 graph_last 4 80 aaacgaaagt 559 0.389870366901469 0.379310344827586 11 29 14 10 NM_028871 refGene chr4 135120062 + 98142 graph_last 23 100 taagatttca 560 0.389870366901469 0.379310344827586 11 29 14 10 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 561 0.396176505892714 0.653543307086614 83 127 108 44 ccccagccag 562 0.397996552990106 1.5 156 104 204 36 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 563 0.397996552990106 0.4 14 35 18 12 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 564 0.41142229569338 4.33333333333333 26 6 34 2 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 565 0.411610182670887 0.595238095238095 50 84 65 29 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 566 0.416245316768845 0.307692307692308 8 26 11 9 AV070736 all_est chr1 94583963 - 4754 graph_last 83 220 tctgtgatgt 567 0.416245316768845 0.307692307692308 8 26 11 9 NM_146243 refGene chr11 19961775 + 18008 graph_last 22 71 cacacagact 568 0.418942964299105 0.3 6 20 8 7 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 569 0.418942964299105 0.3 6 20 8 7 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 570 0.418942964299105 0.3 6 20 8 7 NM_009030 refGene chr4 128222930 + 97446 graph_last l 13 60 gagagtaaca 571 0.418942964299105 0.3 6 20 8 7 gctcctccct 572 0.418942964299105 0.3 6 20 8 7 taaaatttgt 573 0.418942964299105 0.3 6 20 8 7 NM_027320 refGene chr11 101122702 - 23970 graph_last l 22 73 tgggaagtgt 574 0.418942964299105 0.3 6 20 8 7 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 575 0.418942964299105 3.33333333333333 30 9 39 3 NM_008503 refGene chr17 24316262 - 57823 graph_last l 47 117 aacatcatcc 576 0.421124978204077 0.214285714285714 3 14 4 5 NM_019410 refGene chr3 59231425 - 85210 graph_last l 161 357 aagcgtgcag 577 0.421124978204077 0.45 18 40 23 14 NM_199022 refGene chr2 125929378 + 78833 graph_last l 25 72 cattaaataa 578 0.421124978204077 0.214285714285714 3 14 4 5 NM_029999 refGene chr17 73357998 + 61062 graph_last l 13 53 cctgttgtga 579 0.421124978204077 0.214285714285714 3 14 4 5 gcctagaact 580 0.421124978204077 0.214285714285714 3 14 4 5 NM_028659 refGene chr3 93044981 - 86956 graph_last 239 561 gcctcctccc 581 0.421124978204077 2.26086956521739 52 23 68 8 NM_021921 refGene chr15 91147347 - 49270 graph_last l 19 73 gcttttggga 582 0.421124978204077 0.214285714285714 3 14 4 5 ggctgcagcc 583 0.421124978204077 3 36 12 47 4 NM_172618 refGene chr17 29856015 - 58475 graph_last l 6 39 gtagatgtgg 584 0.421124978204077 0.214285714285714 3 14 4 5 NM_016703 refGene chr5 29292420 - 101545 graph_last l 15 40 tgaagatgcc 585 0.421124978204077 0.214285714285714 3 14 4 5 NM_011512 refGene chr2 27182459 - 72967 graph_last l 46 114 tgaagtaagg 586 0.421124978204077 0.214285714285714 3 14 4 5 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 587 0.421124978204077 0.214285714285714 3 14 4 5 NM_028982 refGene chr6 136643905 + 117563 graph_last l 35 126 tggtgcggtg 588 0.421124978204077 0.214285714285714 3 14 4 5 tgttatgaga 589 0.421124978204077 0.214285714285714 3 14 4 5 NM_178703 refGene chr6 116077681 + 116195 graph_last l 76 354 tacgtttcta 590 0.42551869079921 0.294117647058824 5 17 6 6 tctgtaattg 591 0.42551869079921 0.294117647058824 5 17 6 6 ttagaacgtg 592 0.42551869079921 0.294117647058824 5 17 6 6 ttcgtccttt 593 0.42551869079921 0.294117647058824 5 17 6 6 NM_011889 refGene chr15 83848784 + 48775 graph_last 10 98 gtgtacatac 594 0.430431626341214 0.428571428571429 15 35 19 12 aagatcaaga 595 0.442389969891694 1.45454545454545 176 121 230 42 cctcggaaaa 596 0.442594983735951 0.546875 35 64 46 22 NM_019411 refGene chr11 51747475 + 19812 graph_last l 93 195 actgtagatg 597 0.46011443899635 0.346153846153846 9 26 12 9 caaggtgaca 598 0.46011443899635 0.680555555555556 98 144 128 50 NM_021539 refGene chr5 116409924 + 106398 graph_last l 42 141 ggatgtaccc 599 0.46011443899635 0.346153846153846 9 26 12 9 NM_007637 refGene chr15 31931318 + 46012 graph_last l 50 193 tcatagaaac 600 0.46011443899635 0.346153846153846 9 26 12 9 tgtgaagtag 601 0.46011443899635 0.346153846153846 9 26 12 9 tgtgtcattt 602 0.46011443899635 0.346153846153846 9 26 12 9 AV342873 all_est chr1 163471941 - 7703 graph_last l 4 23 aaaggatggg 603 0.465889959824433 0.111111111111111 1 9 1 3 aaataacaat 604 0.465889959824433 0.111111111111111 1 9 1 3 NM_145563 refGene chr5 108982037 - 105766 graph_last 3 20 aaatgtgcac 605 0.465889959824433 0.111111111111111 1 9 1 3 NM_009003 refGene chr8 125631605 + 134301 graph_last l 8 35 aacgtgagcg 606 0.465889959824433 0.111111111111111 1 9 1 3 aactgaacaa 607 0.465889959824433 0.111111111111111 1 9 1 3 aagaaaatag 608 0.465889959824433 0.583333333333333 42 72 55 25 NM_009112 refGene chr3 96450188 + 87150 graph_last l 19 59 aagcagaagg 609 0.465889959824433 0.111111111111111 1 9 1 3 aaggactgat 610 0.465889959824433 0.111111111111111 1 9 1 3 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 611 0.465889959824433 0.111111111111111 1 9 1 3 aatgtggcag 612 0.465889959824433 0.111111111111111 1 9 1 3 genomic chr17 28803936 - 0 unique_long l 9 26 acttcattgg 613 0.465889959824433 0.111111111111111 1 9 1 3 agctcttgta 614 0.465889959824433 0.111111111111111 1 9 1 3 aggaaactta 615 0.465889959824433 0.111111111111111 1 9 1 3 NM_019442 refGene chr17 34484621 - 58888 graph_last 9 28 aggagccaat 616 0.465889959824433 0.111111111111111 1 9 1 3 NM_011502 refGene chr19 11606418 + 68093 graph_last l 4 37 agtgagtgac 617 0.465889959824433 0.111111111111111 1 9 1 3 genomic chr12 60347856 + 0 unique_long l 4 24 agtggggtct 618 0.465889959824433 0.111111111111111 1 9 1 3 NM_011865 refGene chr6 87941239 - 114590 graph_second 0 8 atccaactgt 619 0.465889959824433 0.111111111111111 1 9 1 3 BC046438 knownGene chr13 71509181 + 36073 graph_last l 9 20 atgatgtgca 620 0.465889959824433 0.111111111111111 1 9 1 3 NM_011342 refGene chr3 100807621 + 87579 graph_last l 7 31 atgcacagat 621 0.465889959824433 0.111111111111111 1 9 1 3 atggcttaat 622 0.465889959824433 6.33333333333333 19 3 25 1 attacggtgg 623 0.465889959824433 0.538461538461538 28 52 36 18 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 624 0.465889959824433 0.111111111111111 1 9 1 3 atttttgtat 625 0.465889959824433 0.111111111111111 1 9 1 3 caaatgaggc 626 0.465889959824433 0.111111111111111 1 9 1 3 cagcatcacc 627 0.465889959824433 1.96875 63 32 82 11 NM_080638 refGene chr7 119108898 + 125151 graph_last l 13 39 cagcattcag 628 0.465889959824433 0.111111111111111 1 9 1 3 cagcttctgc 629 0.465889959824433 0.111111111111111 1 9 1 3 genomic chr10 126155645 + 0 unique_long l 8 29 caggaggtca 630 0.465889959824433 0.111111111111111 1 9 1 3 AK032343 all_mrna chr7 71977154 + 122340 graph_last l 31 156 caggctgata 631 0.465889959824433 6.33333333333333 19 3 25 1 NM_009338 refGene chr17 13166480 - 57147 graph_last 6 30 cagttcaccc 632 0.465889959824433 0.111111111111111 1 9 1 3 NM_028967 refGene chr19 6179959 - 67652 graph_last l 47 89 ccaaaaggaa 633 0.465889959824433 0.111111111111111 1 9 1 3 ccaggcggtg 634 0.465889959824433 0.111111111111111 1 9 1 3 cctgtattcc 635 0.465889959824433 0.111111111111111 1 9 1 3 NM_144916 refGene chr6 73402412 + 113854 graph_last l 4 12 ccttagccta 636 0.465889959824433 0.111111111111111 1 9 1 3 NM_026856 refGene chr5 105774526 - 105522 graph_last l 3 15 ctaagaaccg 637 0.465889959824433 0.111111111111111 1 9 1 3 genomic chr12 83328225 + 0 unique_long l 3 12 ctcagtccat 638 0.465889959824433 0.111111111111111 1 9 1 3 ctgctttctg 639 0.465889959824433 0.111111111111111 1 9 1 3 NM_010875 refGene chr9 51510696 + 137508 graph_last 1 17 ctggtcttta 640 0.465889959824433 0.111111111111111 1 9 1 3 ctgtctggtt 641 0.465889959824433 0.111111111111111 1 9 1 3 NM_007727 refGene chr15 94185949 + 49433 graph_last l 34 87 ctttaagatg 642 0.465889959824433 0.111111111111111 1 9 1 3 NM_029810 refGene chr19 46888273 - 70244 graph_last l 2 17 ctttcattat 643 0.465889959824433 0.111111111111111 1 9 1 3 NM_019880 refGene chr17 28964297 - 58352 graph_last l 10 27 ctttgccctg 644 0.465889959824433 0.111111111111111 1 9 1 3 gaaatgataa 645 0.465889959824433 0.111111111111111 1 9 1 3 NM_027911 refGene chr9 21633387 - 135606 graph_last l 13 44 gaactgaaaa 646 0.465889959824433 0.111111111111111 1 9 1 3 gaagcaaaga 647 0.465889959824433 6.66666666666667 20 3 26 1 NM_172676 refGene chr2 181443433 - 82496 graph_last 1 13 gaagggggct 648 0.465889959824433 0.111111111111111 1 9 1 3 BE649911 all_est chr13 58923938 + 35413 graph_last l 27 89 gaatgtctct 649 0.465889959824433 0.111111111111111 1 9 1 3 NM_133708 refGene chr1 76993848 + 3708 graph_last l 7 25 gacagtgaga 650 0.465889959824433 0.111111111111111 1 9 1 3 gagcgttttg 651 0.465889959824433 0.73170731707317 150 205 196 71 NM_011186 refGene chr14 45704939 - 41303 graph_second 0 7 gagtcattgt 652 0.465889959824433 0.111111111111111 1 9 1 3 NM_133236 refGene chr6 8320530 + 110253 graph_last 14 29 gagtgacaaa 653 0.465889959824433 0.111111111111111 1 9 1 3 gcaactgggc 654 0.465889959824433 0.111111111111111 1 9 1 3 gcaatctgat 655 0.465889959824433 2.58823529411765 44 17 57 6 NM_053078 refGene chr18 33627441 + 63718 graph_last 0 6 gcacttatta 656 0.465889959824433 0.111111111111111 1 9 1 3 gctatgcaaa 657 0.465889959824433 0.111111111111111 1 9 1 3 NM_008801 refGene chr1 88425290 - 4331 graph_last l 20 37 ggaacaaacc 658 0.465889959824433 0.111111111111111 1 9 1 3 NM_016680 refGene chr7 16538177 + 119318 graph_last 1 11 ggaggcaggg 659 0.465889959824433 0.111111111111111 1 9 1 3 AK005166 knownGene chr9 111415950 - 141435 graph_last 0 6 gggactatgg 660 0.465889959824433 0.111111111111111 1 9 1 3 NM_023173 refGene chr1 174644531 - 8404 graph_last l 4 11 gtggatgtca 661 0.465889959824433 0.111111111111111 1 9 1 3 NM_009931 refGene chr8 11909162 - 127961 graph_last l 13 28 gtgtctgata 662 0.465889959824433 0.111111111111111 1 9 1 3 NM_011707 refGene chr11 78072882 + 21953 graph_last l 20 59 gtgtgccagg 663 0.465889959824433 0.111111111111111 1 9 1 3 NM_146008 refGene chr10 86935884 + 14433 graph_last l 3 18 gttgttttat 664 0.465889959824433 0.111111111111111 1 9 1 3 genomic chr9 97828473 - 0 unique_both b 10 18 taaagcgttg 665 0.465889959824433 0.111111111111111 1 9 1 3 taaatatata 666 0.465889959824433 0.111111111111111 1 9 1 3 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 667 0.465889959824433 0.111111111111111 1 9 1 3 taataaaatg 668 0.465889959824433 0.111111111111111 1 9 1 3 AY057898 knownGene chr10 124793682 - 16432 graph_last 2 18 taccattaca 669 0.465889959824433 0.111111111111111 1 9 1 3 NM_175492 refGene chr11 105593087 + 24424 graph_last l 32 69 tatacagagc 670 0.465889959824433 0.111111111111111 1 9 1 3 NM_148938 refGene chr15 9001386 - 45224 graph_last l 46 100 tatagaaagg 671 0.465889959824433 0.111111111111111 1 9 1 3 tatttcagtg 672 0.465889959824433 0.111111111111111 1 9 1 3 NM_019942 refGene chrX 28238769 - 147895 graph_last l 17 49 tcaattttca 673 0.465889959824433 0.111111111111111 1 9 1 3 tcatccaatg 674 0.465889959824433 0.111111111111111 1 9 1 3 NM_010404 refGene chr11 99931508 - 23830 graph_last l 9 50 tctgccagaa 675 0.465889959824433 0.111111111111111 1 9 1 3 AK049571 all_mrna chr17 84592004 - 61688 graph_second 0 33 tctgtttgtc 676 0.465889959824433 0.111111111111111 1 9 1 3 AK032292 knownGene chr7 113554762 + 124809 graph_last l 15 33 tgaaataaat 677 0.465889959824433 0.111111111111111 1 9 1 3 tgcctttaat 678 0.465889959824433 0.111111111111111 1 9 1 3 NM_025959 refGene chr14 37093216 + 40740 graph_last l 11 32 tggcaatcaa 679 0.465889959824433 0.111111111111111 1 9 1 3 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 680 0.465889959824433 0.111111111111111 1 9 1 3 NM_009255 refGene chr1 81573344 - 3878 graph_last l 19 285 tgttcactaa 681 0.465889959824433 0.111111111111111 1 9 1 3 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 682 0.465889959824433 6.66666666666667 20 3 26 1 NM_009061 refGene chr1 147167009 - 6919 graph_last l 42 62 ttaccacata 683 0.465889959824433 0.111111111111111 1 9 1 3 NM_013855 refGene chr17 23976949 + 57786 graph_second 0 21 ttataaactg 684 0.465889959824433 0.111111111111111 1 9 1 3 NM_023858 refGene chr9 14018789 - 135264 graph_last l 4 12 ttataatctt 685 0.465889959824433 0.111111111111111 1 9 1 3 ttcactcagt 686 0.465889959824433 0.111111111111111 1 9 1 3 S76838 knownGene chr8 13715222 - 128080 graph_last 2 9 ttcagcagcg 687 0.465889959824433 0.111111111111111 1 9 1 3 AK013739 knownGene chr1 39488467 - 1712 graph_last l 16 48 ttgaaaccct 688 0.465889959824433 0.111111111111111 1 9 1 3 NM_029870 refGene chr17 26374491 + 58052 graph_last 0 81 ttgaatgtaa 689 0.465889959824433 0.111111111111111 1 9 1 3 NM_080461 refGene chr8 3408505 + 127585 graph_last l 4 19 ttgctgatcc 690 0.465889959824433 0.111111111111111 1 9 1 3 CK339473 all_est chr1 53427865 - 2273 graph_last l 33 64 ttgctttgaa 691 0.465889959824433 0.111111111111111 1 9 1 3 NM_172827 refGene chr17 17012571 - 57456 graph_last l 19 38 tttaactata 692 0.465889959824433 0.111111111111111 1 9 1 3 NM_011801 refGene chr8 113461104 - 133515 graph_last l 25 71 tttccagcaa 693 0.465889959824433 0.111111111111111 1 9 1 3 ttttatgttt 694 0.465889959824433 0.683823529411765 93 136 121 47 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 695 0.479462296607859 0.527272727272727 29 55 38 19 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 696 0.479462296607859 Inf 12 0 16 0 aggtgctgag 697 0.479462296607859 Inf 13 0 17 0 NM_013507 refGene chr7 102994114 - 124245 graph_last l 92 225 ataactgagt 698 0.479462296607859 3.11111111111111 28 9 37 3 atccggcgcc 699 0.479462296607859 3.11111111111111 28 9 37 3 atgtactcgg 700 0.479462296607859 Inf 12 0 16 0 caagtcttcc 701 0.479462296607859 0.384615384615385 10 26 13 9 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 702 0.479462296607859 Inf 12 0 16 0 NM_175488 refGene chr10 95970030 - 14952 graph_last 27 87 cagcttgcaa 703 0.479462296607859 Inf 13 0 17 0 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 704 0.479462296607859 0.384615384615385 10 26 13 9 NM_027898 refGene chr7 25153876 - 120022 graph_last l 21 74 gaaccctggc 705 0.479462296607859 Inf 13 0 17 0 gagacggtgc 706 0.479462296607859 0.40625 13 32 17 11 gaggcttata 707 0.479462296607859 Inf 12 0 16 0 gcccccaatg 708 0.479462296607859 Inf 12 0 16 0 gggtgggaag 709 0.479462296607859 3.11111111111111 28 9 37 3 ggtaaacaat 710 0.479462296607859 Inf 12 0 16 0 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 711 0.479462296607859 Inf 12 0 16 0 tatattttct 712 0.479462296607859 Inf 12 0 16 0 tgcagcactg 713 0.479462296607859 Inf 12 0 16 0 NM_012010 refGene chrX 83927636 + 149980 graph_last 14 45 ttccaataca 714 0.479462296607859 Inf 13 0 17 0 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 715 0.479462296607859 Inf 12 0 16 0 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 716 0.487833954006105 2 58 29 76 10 aactgagggg 717 0.501290126328915 0.447368421052632 17 38 22 13 NM_010629 refGene chr1 167474293 + 7952 graph_last l 125 305 cagttattgt 718 0.501290126328915 0.447368421052632 17 38 22 13 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 719 0.515048949673591 0.782006920415225 226 289 295 100 aatacttttg 720 0.518506100986591 0.347826086956522 8 23 10 8 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 721 0.518506100986591 0.347826086956522 8 23 10 8 gttgctgttt 722 0.518506100986591 0.347826086956522 8 23 10 8 NM_017368 refGene chr2 91631056 + 76800 graph_last l 6 28 aaacatacac 723 0.527365945394195 0.285714285714286 4 14 5 5 aaacccttaa 724 0.527365945394195 0.166666666666667 2 12 3 4 NM_017472 refGene chr10 44143976 + 11990 graph_last l 45 113 aaagattaat 725 0.527365945394195 0.285714285714286 4 14 5 5 aacggtgttt 726 0.527365945394195 0.285714285714286 4 14 5 5 NM_153775 refGene chr8 124327700 + 134129 graph_last l 11 49 aagcaggaag 727 0.527365945394195 0.285714285714286 4 14 5 5 NM_173071 refGene chr4 128932627 + 97545 graph_last l 18 90 aagctgggct 728 0.527365945394195 0.166666666666667 2 12 3 4 NM_153545 refGene chr11 120272391 + 25607 graph_last l 8 32 aaggctgcag 729 0.527365945394195 0.166666666666667 2 12 3 4 NM_177298 refGene chr5 31109648 - 101730 graph_last l 15 38 aatttctcct 730 0.527365945394195 0.166666666666667 2 12 3 4 NM_011857 refGene chr8 48179124 - 129903 graph_last 2 24 acccctctgt 731 0.527365945394195 0.285714285714286 4 14 5 5 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 732 0.527365945394195 0.294117647058824 5 17 7 6 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 733 0.527365945394195 0.166666666666667 2 12 3 4 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 734 0.527365945394195 0.294117647058824 5 17 7 6 NM_146243 refGene chr11 19961420 - 18008 graph_last l 19 78 actgttaaaa 735 0.527365945394195 0.294117647058824 5 17 7 6 NM_008165 refGene chr11 56925522 + 20133 graph_last l 9 93 agccacagtt 736 0.527365945394195 0.166666666666667 2 12 3 4 NM_177614 refGene chr10 130368387 - 16662 graph_last l 11 55 agggtgagga 737 0.527365945394195 0.285714285714286 4 14 5 5 NM_175190 refGene chr2 32553095 - 73420 graph_last 54 93 agtacaatga 738 0.527365945394195 0.166666666666667 2 12 3 4 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 739 0.527365945394195 0.294117647058824 5 17 7 6 atctgacgcc 740 0.527365945394195 0.285714285714286 4 14 5 5 atcttcctcc 741 0.527365945394195 0.166666666666667 2 12 3 4 NM_024267 refGene chr14 46753817 - 41402 graph_last l 12 54 atgggcctca 742 0.527365945394195 0.285714285714286 4 14 5 5 NM_026122 refGene chr9 85866120 - 139919 graph_last l 21 50 caatttttct 743 0.527365945394195 0.166666666666667 2 12 3 4 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 744 0.527365945394195 0.166666666666667 2 12 3 4 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 745 0.527365945394195 0.166666666666667 2 12 3 4 NM_177235 refGene chr1 34541314 - 1365 graph_last l 39 94 cccagcaaac 746 0.527365945394195 0.166666666666667 2 12 3 4 ctgctgtacc 747 0.527365945394195 0.294117647058824 5 17 7 6 ctggaagagg 748 0.527365945394195 0.166666666666667 2 12 3 4 ctggagctag 749 0.527365945394195 0.166666666666667 2 12 3 4 NM_153581 refGene chr8 55141142 + 130191 graph_last l 32 101 gaaataacta 750 0.527365945394195 0.294117647058824 5 17 7 6 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 751 0.527365945394195 1.90625 61 32 80 11 NM_008989 refGene chr18 36470200 + 63957 graph_last l 10 43 gatctcaagg 752 0.527365945394195 0.166666666666667 2 12 3 4 gattgatgca 753 0.527365945394195 0.294117647058824 5 17 7 6 NM_015827 refGene chr9 100985513 + 140652 graph_last l 21 46 gcctcccaaa 754 0.527365945394195 0.166666666666667 2 12 3 4 ggcaaaaagc 755 0.527365945394195 0.166666666666667 2 12 3 4 gggatataaa 756 0.527365945394195 0.285714285714286 4 14 5 5 NM_175260 refGene chr11 68387672 + 20928 graph_last 9 43 ggtttggaat 757 0.527365945394195 0.166666666666667 2 12 3 4 NM_019649 refGene chr7 16587669 - 119324 graph_last l 31 100 gtgaagccaa 758 0.527365945394195 0.166666666666667 2 12 3 4 gtgaccttgt 759 0.527365945394195 0.166666666666667 2 12 3 4 NM_029031 refGene chr11 72747651 - 21365 graph_last l 8 32 gtgcacgtct 760 0.527365945394195 0.166666666666667 2 12 3 4 gttggaaaca 761 0.527365945394195 0.294117647058824 5 17 7 6 NM_025303 refGene chr1 16611261 - 594 graph_last 7 28 tacaatcaga 762 0.527365945394195 0.166666666666667 2 12 3 4 NM_126165 refGene chr8 108577067 + 133146 graph_last l 42 86 taggacactt 763 0.527365945394195 0.285714285714286 4 14 5 5 NM_022424 refGene chr5 29632580 - 101589 graph_last l 17 61 tcacctgcat 764 0.527365945394195 0.294117647058824 5 17 7 6 NM_018871 refGene chr5 134737023 + 107744 graph_last l 30 57 tcactatagc 765 0.527365945394195 0.166666666666667 2 12 3 4 NM_021477 refGene chr16 6895625 + 51276 graph_last l 42 94 tcagaggtgt 766 0.527365945394195 0.166666666666667 2 12 3 4 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 767 0.527365945394195 0.285714285714286 4 14 5 5 NM_013725 refGene chr7 38100510 - 120754 graph_last 141 373 tctgtgcacc 768 0.527365945394195 0.5625 36 64 47 22 tgctgaatca 769 0.527365945394195 0.285714285714286 4 14 5 5 NM_028117 refGene chr2 119198414 - 78340 graph_last 0 39 tgcttggcta 770 0.527365945394195 0.285714285714286 4 14 5 5 AV205517 all_est chr14 68107603 - 42855 graph_last l 56 129 tggccctctg 771 0.527365945394195 0.285714285714286 4 14 5 5 NM_175836 refGene chr11 29998268 - 18592 graph_last l 29 148 tggcttttct 772 0.527365945394195 0.285714285714286 4 14 5 5 AK129145 knownGene chr4 150502502 + 99571 graph_last l 14 84 tgggctgctg 773 0.527365945394195 0.294117647058824 5 17 7 6 tgtgtcaacc 774 0.527365945394195 0.488372093023256 21 43 28 15 NM_008139 refGene chr19 16285368 + 68305 graph_last l 46 89 tgttactctc 775 0.527365945394195 0.166666666666667 2 12 3 4 NM_146200 refGene chr7 118690565 - 125113 graph_last l 7 25 ttacaacaag 776 0.527365945394195 0.166666666666667 2 12 3 4 genomic chr6 42782014 - 0 unique_long l 17 52 ttgaaagtgc 777 0.527365945394195 0.285714285714286 4 14 5 5 NM_017367 refGene chr5 94551931 + 104851 graph_last 8 22 tttctttggt 778 0.527365945394195 0.166666666666667 2 12 3 4 genomic chr16 21270920 + 0 unique_long l 12 55 tttgagtcct 779 0.527365945394195 0.166666666666667 2 12 3 4 NM_030680 refGene chr10_random 137448 - 17001 graph_last 12 52 ttttattggt 780 0.527365945394195 0.285714285714286 4 14 5 5 tttttgtagt 781 0.527365945394195 0.285714285714286 4 14 5 5 tgtagtgtaa 782 0.527956311980554 0.68503937007874 87 127 114 44 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 783 0.539717730137960 0.511627906976744 22 43 29 15 NM_009238 refGene chr13 28839679 - 33570 graph_last l 6 39 tccctgggca 784 0.539717730137960 0.423076923076923 11 26 14 9 ctcgagtctc 785 0.552390891393081 2.64285714285714 37 14 48 5 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 786 0.552390891393081 2.57142857142857 36 14 47 5 NM_153526 refGene chr5_random 23332765 - 109461 graph_last 21 98 aacctcgctg 787 0.552565392173567 0.347826086956522 8 23 11 8 NM_146229 refGene chr9 117107277 + 141830 graph_last l 70 147 actttcaact 788 0.552565392173567 0.347826086956522 8 23 11 8 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 789 0.555264088889682 0.633333333333333 57 90 75 31 cctttggcaa 790 0.563725944525644 2.71428571428571 38 14 49 5 cagaagaaag 791 0.569331138769728 6 18 3 23 1 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 792 0.569331138769728 6 18 3 23 1 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 793 0.569331138769728 6 18 3 23 1 gttgaaatta 794 0.569331138769728 6 18 3 23 1 NM_019754 refGene chr16 46057984 - 54005 graph_last l 51 138 taagatgctg 795 0.569331138769728 6 18 3 23 1 NM_009672 refGene chr9 64726839 + 138431 graph_last l 35 106 tacctcgatg 796 0.569331138769728 6 18 3 23 1 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 797 0.569331138769728 0.783393501805054 217 277 284 96 gtgggcgtgt 798 0.589329083207024 1.52564102564103 119 78 156 27 ttcagctcga 799 0.59370493381904 0.652173913043478 60 92 78 32 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 800 0.60759886897285 3 27 9 35 3 gccaaaccaa 801 0.608042907148745 3.66666666666667 22 6 29 2 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 802 0.608042907148745 3.66666666666667 22 6 29 2 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 803 0.608042907148745 3.66666666666667 22 6 29 2 NM_153808 refGene chr19 23452625 + 68731 graph_last 0 137 ttcaaaaaaa 804 0.608042907148745 3.66666666666667 22 6 29 2 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 805 0.617830854931113 3.83333333333333 23 6 30 2 tctgccctct 806 0.63183888171536 0.413793103448276 12 29 16 10 tgctgtgaaa 807 0.63183888171536 0.413793103448276 12 29 16 10 tctaccccat 808 0.631876922103303 0.5 20 40 26 14 attgtttatg 809 0.633671940241249 2 52 26 68 9 aaaaataaaa 810 0.647707798523904 Inf 11 0 14 0 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 811 0.647707798523904 Inf 11 0 15 0 NM_016884 refGene chr14 43945073 - 41160 graph_last 4 27 aattcccgtg 812 0.647707798523904 Inf 11 0 15 0 aattcccttt 813 0.647707798523904 Inf 11 0 15 0 AK012553 knownGene chr2 107145879 + 77702 graph_last 8 28 accgacggtt 814 0.647707798523904 Inf 11 0 14 0 accttttctt 815 0.647707798523904 0.391304347826087 9 23 12 8 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 816 0.647707798523904 Inf 11 0 15 0 NM_009408 refGene chr2 161260208 + 81031 graph_last b 6 31 agcggggacc 817 0.647707798523904 Inf 11 0 14 0 atcggttcca 818 0.647707798523904 Inf 11 0 15 0 NM_013922 refGene chr11 50436366 - 19703 graph_last l 11 46 caaaagttta 819 0.647707798523904 Inf 11 0 14 0 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 820 0.647707798523904 Inf 11 0 14 0 NM_011531 refGene chr1 135390854 - 6259 graph_last l 7 39 ccagggggac 821 0.647707798523904 Inf 11 0 14 0 ccagtgcaga 822 0.647707798523904 Inf 11 0 15 0 BC052699 knownGene chr6 126842836 + 116923 graph_last l 9 54 ccgacgcccc 823 0.647707798523904 Inf 11 0 14 0 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 824 0.647707798523904 Inf 11 0 14 0 gacccaccgc 825 0.647707798523904 Inf 11 0 15 0 NM_021549 refGene chr7 37815866 - 120715 graph_last l 19 86 gacctcatct 826 0.647707798523904 Inf 11 0 14 0 NM_020588 refGene chr1 137257395 - 6407 graph_last l 27 82 gagcagggga 827 0.647707798523904 Inf 11 0 14 0 gagtgattat 828 0.647707798523904 0.391304347826087 9 23 12 8 gattgtcaaa 829 0.647707798523904 Inf 11 0 14 0 gcaaaaaaaa 830 0.647707798523904 Inf 11 0 14 0 gcagcgtccg 831 0.647707798523904 Inf 11 0 14 0 gcgccgaaag 832 0.647707798523904 Inf 11 0 15 0 NM_177188 refGene chr15_random 18412680 + 50810 graph_last 6 30 gcttgctgcc 833 0.647707798523904 Inf 11 0 14 0 gtagcgcaca 834 0.647707798523904 Inf 11 0 14 0 NM_177270 refGene chr5 92464338 - 104668 graph_last 40 111 gtgactgttc 835 0.647707798523904 Inf 11 0 14 0 gtgcatccag 836 0.647707798523904 Inf 11 0 15 0 NM_025647 refGene chr4 113869312 - 96275 graph_last 38 114 gttacttgtt 837 0.647707798523904 Inf 11 0 14 0 tacacggagc 838 0.647707798523904 Inf 11 0 15 0 NM_008064 refGene chr11 118841324 - 25448 graph_last l 24 82 tacataatcc 839 0.647707798523904 Inf 11 0 14 0 NM_021535 refGene chr4 40784770 - 92391 graph_last l 12 70 tctgcgtcct 840 0.647707798523904 Inf 11 0 15 0 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 841 0.647707798523904 Inf 11 0 15 0 tgtgaccccc 842 0.647707798523904 Inf 11 0 15 0 tgttcaatca 843 0.647707798523904 Inf 11 0 14 0 NM_010847 refGene chr19 53323764 + 70500 graph_last 29 74 tgttccctct 844 0.647707798523904 Inf 11 0 14 0 NM_178718 refGene chr15 68198891 + 47652 graph_last l 9 43 ttaaaactga 845 0.647707798523904 Inf 11 0 14 0 ttgcacactt 846 0.647707798523904 Inf 11 0 15 0 caccaccgtt 847 0.654219620793758 1.57377049180328 96 61 125 21 NM_023871 refGene chr2 30346412 - 73215 graph_last 18 64 attcaaatcc 848 0.676223333626837 0.448275862068966 13 29 17 10 NM_011968 refGene chr12 50762699 + 28033 graph_last l 37 125 cctgtctact 849 0.676223333626837 0.448275862068966 13 29 17 10 ctgctatccg 850 0.677974125625961 1.75 70 40 91 14 NM_010808 refGene chr2 156443008 + 80684 graph_last l 5 21 aaactcctgt 851 0.692328161992611 0.222222222222222 2 9 2 3 NM_009059 refGene chr17 33557822 + 58793 graph_last 1 23 aaagtgggtg 852 0.692328161992611 0.222222222222222 2 9 2 3 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 853 0.692328161992611 0.222222222222222 2 9 2 3 NM_026165 refGene chr18_random 1519575 + 66799 graph_last l 17 28 aagtaaggtg 854 0.692328161992611 0.222222222222222 2 9 2 3 NM_133964 refGene chr10 83760581 + 14204 graph_last l 17 74 aataaaataa 855 0.692328161992611 0.25 3 12 4 4 aatgagacaa 856 0.692328161992611 0.357142857142857 5 14 6 5 NM_026887 refGene chrX 151955962 + 152652 graph_last 3 23 aatgttcctt 857 0.692328161992611 0.222222222222222 2 9 2 3 AF133818 knownGene chr3 161696867 + 90649 graph_last 0 50 aatttaagtg 858 0.692328161992611 0.222222222222222 2 9 2 3 AB016490 knownGene chr3 92649260 + 86894 graph_last l 23 53 acacagactt 859 0.692328161992611 0.25 3 12 4 4 acatttctgt 860 0.692328161992611 0.222222222222222 2 9 2 3 NM_133801 refGene chr17 56988329 - 60299 graph_last l 15 47 accacaaagg 861 0.692328161992611 0.25 3 12 4 4 NM_021538 refGene chr10_random 161020 - 17004 graph_last 22 72 acgattcaga 862 0.692328161992611 0.222222222222222 2 9 2 3 NM_008169 refGene chr2 25557785 - 72823 graph_last l 60 152 actagctctc 863 0.692328161992611 0.222222222222222 2 9 2 3 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 864 0.692328161992611 0.222222222222222 2 9 2 3 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 865 0.692328161992611 0.222222222222222 2 9 2 3 U65636 knownGene chr3 97587933 + 87247 graph_last l 2 26 aggccgctgg 866 0.692328161992611 0.25 3 12 4 4 agggacaggt 867 0.692328161992611 0.357142857142857 5 14 6 5 NM_023524 refGene chr7 3687528 - 118479 graph_last l 4 21 agggtgctgg 868 0.692328161992611 0.222222222222222 2 9 2 3 NM_133737 refGene chr6 58201935 + 113084 graph_last l 16 40 aggtaaagga 869 0.692328161992611 0.222222222222222 2 9 2 3 NM_031874 refGene chr9 22514478 - 135726 graph_last 0 11 aggtagaaga 870 0.692328161992611 0.357142857142857 5 14 6 5 aggttggccg 871 0.692328161992611 0.222222222222222 2 9 2 3 ataattctac 872 0.692328161992611 0.222222222222222 2 9 2 3 NM_144896 refGene chr3 87616277 + 86417 graph_last l 5 19 atggtggcag 873 0.692328161992611 0.222222222222222 2 9 2 3 NM_008160 refGene chr9 110981083 + 141375 graph_last 0 86 atggtgtttc 874 0.692328161992611 0.357142857142857 5 14 6 5 AU256308 all_est chr4 53386347 + 93312 graph_last l 4 17 atgtattcag 875 0.692328161992611 0.222222222222222 2 9 2 3 NM_144800 refGene chr15 60223519 + 47251 graph_last l 3 13 attattagaa 876 0.692328161992611 0.222222222222222 2 9 2 3 atttcaaagc 877 0.692328161992611 0.25 3 12 4 4 atttgagttc 878 0.692328161992611 0.222222222222222 2 9 2 3 attttcatca 879 0.692328161992611 0.25 3 12 4 4 caagaccctg 880 0.692328161992611 0.222222222222222 2 9 2 3 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 881 0.692328161992611 0.222222222222222 2 9 2 3 NM_026213 refGene chr15 5250696 - 45004 graph_last l 21 53 cagatgtatg 882 0.692328161992611 0.222222222222222 2 9 2 3 caggaaagct 883 0.692328161992611 0.25 3 12 4 4 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 884 0.692328161992611 0.4 8 20 10 7 NM_198420 refGene chr15 78244879 + 48182 graph_last l 4 23 cagtgcactg 885 0.692328161992611 0.222222222222222 2 9 2 3 ccaaaaaaaa 886 0.692328161992611 0.514285714285714 18 35 23 12 NM_183178 refGene chr17 55924524 + 60186 graph_last l 8 37 ccaacaactg 887 0.692328161992611 0.222222222222222 2 9 2 3 NM_027915 refGene chr11 82965096 + 22353 graph_last l 41 89 ccaagcttga 888 0.692328161992611 0.25 3 12 4 4 ccacagggca 889 0.692328161992611 0.222222222222222 2 9 2 3 NM_013662 refGene chr17 56051344 - 60197 graph_last l 18 51 ccacgtggcc 890 0.692328161992611 0.222222222222222 2 9 2 3 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 891 0.692328161992611 5.33333333333333 16 3 21 1 NM_024427 refGene chr9 69500644 - 138896 graph_last 1 57 cccgtagccc 892 0.692328161992611 0.357142857142857 5 14 6 5 NM_019632 refGene chr2 149090498 - 80110 graph_last l 39 131 cccgtgacct 893 0.692328161992611 0.222222222222222 2 9 2 3 ccctgacttc 894 0.692328161992611 0.357142857142857 5 14 6 5 AY301068 knownGene chr10 26053645 - 11071 graph_last l 16 40 ccctgtaata 895 0.692328161992611 0.222222222222222 2 9 2 3 NM_016925 refGene chr8 125083415 + 134242 graph_last 5 22 cctaccttcc 896 0.692328161992611 0.222222222222222 2 9 2 3 NM_016909 refGene chr8 126836338 + 134395 graph_last l 47 96 cctggtaagt 897 0.692328161992611 0.222222222222222 2 9 2 3 NM_026585 refGene chr6 117890386 + 116329 graph_last b 14 37 cggggccttc 898 0.692328161992611 0.25 3 12 4 4 NM_026993 refGene chr3 149812435 + 90163 graph_last l 12 40 ctactctcta 899 0.692328161992611 0.222222222222222 2 9 2 3 ctcatttcct 900 0.692328161992611 0.222222222222222 2 9 2 3 NM_025351 refGene chr6 90834203 - 114882 graph_last b 56 105 ctcgagaaac 901 0.692328161992611 0.25 3 12 4 4 BC003217 knownGene chr17 62607777 - 60440 graph_last 28 64 ctgaaaaagt 902 0.692328161992611 0.222222222222222 2 9 2 3 genomic chr3 125974948 - 0 unique_long l 2 6 ctgaaatcca 903 0.692328161992611 0.222222222222222 2 9 2 3 BC051520 all_mrna chr2_random 6368419 + 82674 graph_last 0 15 ctgcctgcag 904 0.692328161992611 0.222222222222222 2 9 2 3 NM_173400 refGene chr4 85304442 - 94706 graph_last 1 10 ctgttaagtg 905 0.692328161992611 0.222222222222222 2 9 2 3 cttaggcagc 906 0.692328161992611 0.222222222222222 2 9 2 3 NM_008385 refGene chr4 123806814 - 97069 graph_last l 64 157 ctttgggggc 907 0.692328161992611 0.25 3 12 4 4 BC024678 knownGene chr5 77020270 + 104028 graph_last l 11 33 gaacttggaa 908 0.692328161992611 0.222222222222222 2 9 2 3 gaataataaa 909 0.692328161992611 0.741176470588235 126 170 165 59 gaattggaag 910 0.692328161992611 0.222222222222222 2 9 2 3 NM_177049 refGene chr14 46207444 - 41370 graph_last l 62 211 gaatttggga 911 0.692328161992611 0.514285714285714 18 35 23 12 NM_026493 refGene chr1 10123852 - 322 graph_last l 28 88 gactgatgtc 912 0.692328161992611 0.25 3 12 4 4 NM_126165 refGene chr8 108578638 - 133146 graph_last l 16 52 gagaggagtg 913 0.692328161992611 0.222222222222222 2 9 2 3 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 914 0.692328161992611 2.58333333333333 31 12 40 4 gagttatttt 915 0.692328161992611 0.222222222222222 2 9 2 3 NM_178699 refGene chr4 153809550 + 99794 graph_last l 6 29 gccagaggct 916 0.692328161992611 0.222222222222222 2 9 2 3 gcccccgcat 917 0.692328161992611 0.222222222222222 2 9 2 3 AK014408 knownGene chr11 44190442 + 19304 graph_last l 42 79 gctacaggta 918 0.692328161992611 0.222222222222222 2 9 2 3 gcttgccctc 919 0.692328161992611 0.222222222222222 2 9 2 3 NM_033509 refGene chr1 175860516 - 8514 graph_last 4 19 ggaatggtct 920 0.692328161992611 0.25 3 12 4 4 NM_009974 refGene chr8 96736483 - 132594 graph_last l 7 21 ggagatgaga 921 0.692328161992611 0.222222222222222 2 9 2 3 NM_013512 refGene chr18 33979805 + 63737 graph_last l 2 20 ggaggcggtt 922 0.692328161992611 0.222222222222222 2 9 2 3 BM936517 all_est chr18 32418272 + 63652 graph_last 2 11 ggcagacagt 923 0.692328161992611 0.222222222222222 2 9 2 3 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 924 0.692328161992611 1.96153846153846 51 26 66 9 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 925 0.692328161992611 0.222222222222222 2 9 2 3 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 926 0.692328161992611 5.33333333333333 16 3 21 1 NM_010460 refGene chr11 95903970 + 23381 graph_last 0 19 ggggggtggg 927 0.692328161992611 0.222222222222222 2 9 2 3 gtatttaata 928 0.692328161992611 0.357142857142857 5 14 6 5 NM_144528 refGene chr10 82062156 - 13989 graph_last l 14 41 gtctgtggag 929 0.692328161992611 0.25 3 12 4 4 gtgatgaagc 930 0.692328161992611 0.222222222222222 2 9 2 3 NM_145564 refGene chr5 117083771 + 106435 graph_last l 18 48 gtgggagtct 931 0.692328161992611 0.357142857142857 5 14 6 5 gttaaaagaa 932 0.692328161992611 0.25 3 12 4 4 NM_007790 refGene chr19 53236186 - 70495 graph_last l 4 31 gttaactgaa 933 0.692328161992611 0.357142857142857 5 14 6 5 NM_146084 refGene chr18 34656049 - 63766 graph_last l 19 55 gttagcagtg 934 0.692328161992611 0.25 3 12 4 4 NM_008973 refGene chr6 36811251 + 111736 graph_last 7 44 taaaaaagaa 935 0.692328161992611 0.222222222222222 2 9 2 3 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 936 0.692328161992611 0.357142857142857 5 14 6 5 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 937 0.692328161992611 0.4 8 20 10 7 NM_008666 refGene chr12 24561293 + 26811 graph_last l 15 29 taatgtttat 938 0.692328161992611 0.222222222222222 2 9 2 3 tacaaaaagc 939 0.692328161992611 0.222222222222222 2 9 2 3 NM_172674 refGene chr2 156913705 + 80749 graph_last l 10 36 tacagactcg 940 0.692328161992611 0.222222222222222 2 9 2 3 NM_011012 refGene chr2 181568928 + 82513 graph_last l 25 90 tagctagccc 941 0.692328161992611 0.357142857142857 5 14 6 5 tagtcaggga 942 0.692328161992611 0.514285714285714 18 35 23 12 NM_145393 refGene chr4 130860643 - 97687 graph_last 13 40 tagtgaatgt 943 0.692328161992611 0.222222222222222 2 9 2 3 NM_019658 refGene chr19 53788622 - 70518 graph_second l 12 28 tagttccttc 944 0.692328161992611 0.222222222222222 2 9 2 3 NM_133745 refGene chr10 35377401 + 11550 graph_last l 161 241 tatagctgta 945 0.692328161992611 0.25 3 12 4 4 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 946 0.692328161992611 0.222222222222222 2 9 2 3 tcactgtact 947 0.692328161992611 0.222222222222222 2 9 2 3 tcctataaag 948 0.692328161992611 0.222222222222222 2 9 2 3 NM_009214 refGene chrX 145466932 - 152362 graph_last l 21 54 tccttgcttt 949 0.692328161992611 0.25 3 12 4 4 NM_011503 refGene chr8 3619530 + 127598 graph_last l 4 21 tcggaaatga 950 0.692328161992611 0.222222222222222 2 9 2 3 tcgtgattgt 951 0.692328161992611 0.571428571428571 28 49 36 17 NM_009861 refGene chr4 136115446 - 98237 graph_last l 11 41 tctcctgata 952 0.692328161992611 0.222222222222222 2 9 2 3 NM_027324 refGene chr13 53858187 + 35020 graph_last l 16 48 tctgtgacaa 953 0.692328161992611 0.357142857142857 5 14 6 5 tcttaatgaa 954 0.692328161992611 0.514285714285714 18 35 23 12 NM_027949 refGene chr14 25798654 + 40131 graph_last l 10 37 tcttctctta 955 0.692328161992611 0.222222222222222 2 9 2 3 CK346937 all_est chr6 135531640 - 117451 graph_last 0 10 tcttcttaac 956 0.692328161992611 0.222222222222222 2 9 2 3 NM_198610 refGene chr4 138900938 - 98461 graph_last l 29 73 tcttggcttc 957 0.692328161992611 0.222222222222222 2 9 2 3 AK082350 knownGene chr8 11308623 + 127900 graph_last l 8 19 tctttctgcc 958 0.692328161992611 0.222222222222222 2 9 2 3 tgaaaatgta 959 0.692328161992611 0.357142857142857 5 14 6 5 tgaaaccgcg 960 0.692328161992611 5.33333333333333 16 3 21 1 NM_146085 refGene chr18 36784870 - 64008 graph_last l 10 32 tgactgaggt 961 0.692328161992611 0.222222222222222 2 9 2 3 tgagcccaca 962 0.692328161992611 0.25 3 12 4 4 NM_153580 refGene chr7 118956363 + 125136 graph_last l 7 25 tgcaagcatc 963 0.692328161992611 0.222222222222222 2 9 2 3 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 964 0.692328161992611 0.222222222222222 2 9 2 3 NM_011749 refGene chr16 33232157 + 53033 graph_last l 4 15 tgctacctag 965 0.692328161992611 0.222222222222222 2 9 2 3 tgctgcacgt 966 0.692328161992611 0.4 8 20 10 7 tgctgtgcat 967 0.692328161992611 2.58333333333333 31 12 40 4 NM_145732 refGene chr6 77967413 - 114015 graph_last 26 44 tggattctta 968 0.692328161992611 0.222222222222222 2 9 2 3 tggcaagcta 969 0.692328161992611 0.222222222222222 2 9 2 3 NM_145465 refGene chr14 114360138 + 44472 graph_last l 5 24 tgggaacctt 970 0.692328161992611 0.357142857142857 5 14 6 5 tgtactggca 971 0.692328161992611 0.434782608695652 10 23 13 8 NM_011029 refGene chr9 122506722 + 142160 graph_last 0 327 tgtcatctag 972 0.692328161992611 0.434782608695652 10 23 13 8 tgtttcatac 973 0.692328161992611 0.357142857142857 5 14 6 5 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 974 0.692328161992611 0.534883720930233 23 43 30 15 AK090075 knownGene chr10 101772845 - 15250 graph_last 0 19 ttaaataaaa 975 0.692328161992611 0.222222222222222 2 9 2 3 ttaatattta 976 0.692328161992611 0.35 7 20 9 7 NM_024282 refGene chr1 182286220 + 8894 graph_last 4 38 ttacaacatt 977 0.692328161992611 0.222222222222222 2 9 2 3 NM_133485 refGene chr10 3350620 + 9896 graph_last l 4 33 ttaggagcta 978 0.692328161992611 0.25 3 12 4 4 ttatctgtgt 979 0.692328161992611 0.222222222222222 2 9 2 3 BC017687 knownGene chrX 6381072 + 147039 graph_last l 11 36 ttcaatgttc 980 0.692328161992611 0.222222222222222 2 9 2 3 ttccctgaag 981 0.692328161992611 0.25 3 12 4 4 ttctaagaag 982 0.692328161992611 0.222222222222222 2 9 2 3 NM_020050 refGene chr7 101779623 - 124151 graph_last l 61 95 ttctagaaca 983 0.692328161992611 0.222222222222222 2 9 2 3 NM_009395 refGene chr11 78096024 - 21956 graph_last l 9 26 ttctaggcta 984 0.692328161992611 0.222222222222222 2 9 2 3 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 985 0.692328161992611 0.25 3 12 4 4 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 986 0.692328161992611 2.5 30 12 39 4 AK009207 knownGene chr7 124581210 + 125500 graph_last l 6 33 ttgtctccag 987 0.692328161992611 0.222222222222222 2 9 2 3 NM_175266 refGene chr9 113882938 + 141650 graph_last l 48 97 ttgtggagtg 988 0.692328161992611 0.35 7 20 9 7 tttgtaatac 989 0.692328161992611 0.222222222222222 2 9 2 3 NM_175514 refGene chr2 84249596 + 76272 graph_last l 50 123 ttttggtgta 990 0.692328161992611 0.222222222222222 2 9 2 3 tgtaagtctg 991 0.701264593261866 2.88888888888889 26 9 34 3 caaaaataaa 992 0.71139985678162 0.558139534883721 24 43 31 15 NM_010327 refGene chr16 18226867 - 52048 graph_last l 220 602 ctccgttttg 993 0.71139985678162 0.558139534883721 24 43 31 15 NM_011112 refGene chr12 101396152 + 30934 graph_last 24 79 actggagttt 994 0.711814207672365 5.66666666666667 17 3 22 1 caaatgaagt 995 0.711814207672365 5.66666666666667 17 3 22 1 NM_008138 refGene chr9 110247498 - 141261 graph_last l 20 144 cagagatccc 996 0.711814207672365 3.5 21 6 27 2 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 997 0.711814207672365 3.5 21 6 27 2 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 998 0.714258332068663 0.724409448818898 92 127 120 44 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 999 0.72117207267089 3.5 21 6 28 2 NM_016759 refGene chr11 102066168 + 24069 graph_last l 40 181 ggaagtggtg 1000 0.72117207267089 3.5 21 6 28 2 NM_146019 refGene chr11 68914658 - 21006 graph_last l 49 176 gggaaccccc 1001 0.72117207267089 3.5 21 6 28 2 taatagctag 1002 0.72117207267089 0.603448275862069 35 58 46 20 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 1003 0.72117207267089 0.5 19 38 25 13 NM_013608 refGene chr10 131323738 + 16744 graph_last l 94 328 tcgcaagcaa 1004 0.722166817433568 2.23529411764706 38 17 50 6 tgtgccaagt 1005 0.729639220445653 0.691588785046729 74 107 97 37 ggatttggct 1006 0.742095317376663 1.34645669291339 171 127 224 44 gcagggtggg 1007 0.756593900906756 1.86206896551724 54 29 70 10 tgaacccact 1008 0.756593900906756 0.46875 15 32 20 11 CD352670 all_est chr5 122023911 - 106823 graph_last l 33 377 aacttaaaaa 1009 0.758216430860858 0.423076923076923 11 26 15 9 gtctacagag 1010 0.758216430860858 0.423076923076923 11 26 15 9 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 1011 0.762557503115397 1.53448275862069 89 58 116 20 tttctgtatg 1012 0.762568969446002 0.526315789473684 20 38 26 13 aaggtggaag 1013 0.76736897529534 1.55172413793103 90 58 118 20 aaaaacaaaa 1014 0.774871596554963 Inf 9 0 12 0 NM_175473 refGene chr5 95660314 + 104920 graph_last 0 8 aaaagccttt 1015 0.774871596554963 0.166666666666667 1 6 1 2 aaaatattga 1016 0.774871596554963 0.166666666666667 1 6 1 2 aaaatgtata 1017 0.774871596554963 0.166666666666667 1 6 1 2 NM_133352 refGene chr19 41277237 - 69785 graph_last 18 66 aaacattggg 1018 0.774871596554963 0.222222222222222 2 9 3 3 NM_025665 refGene chr6 88092635 - 114620 graph_last l 3 26 aaacttgagg 1019 0.774871596554963 0.166666666666667 1 6 1 2 aaaggatgtt 1020 0.774871596554963 0.166666666666667 1 6 1 2 aaatgtgaat 1021 0.774871596554963 0.222222222222222 2 9 3 3 NM_028325 refGene chrX 27525223 + 147861 graph_last l 21 48 aacaaatcca 1022 0.774871596554963 0.166666666666667 1 6 1 2 NM_146145 refGene chr4 100013212 - 95410 graph_last l 10 21 aacaacattt 1023 0.774871596554963 0.166666666666667 1 6 1 2 aacaatattc 1024 0.774871596554963 0.166666666666667 1 6 1 2 aacacatttt 1025 0.774871596554963 0.166666666666667 1 6 1 2 NM_013768 refGene chr14 45597238 - 41288 graph_last l 5 35 aacacttgac 1026 0.774871596554963 0.222222222222222 2 9 3 3 NM_010192 refGene chr17 56188251 + 60209 graph_last l 15 38 aacccctttg 1027 0.774871596554963 0.166666666666667 1 6 1 2 NM_010160 refGene chr2 6458596 - 71738 graph_last l 7 30 aaccgtttct 1028 0.774871596554963 0.166666666666667 1 6 1 2 NM_007733 refGene chr1 24941145 + 1003 graph_last l 18 39 aacctacaag 1029 0.774871596554963 0.166666666666667 1 6 1 2 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 1030 0.774871596554963 0.222222222222222 2 9 3 3 aactgacatt 1031 0.774871596554963 0.166666666666667 1 6 1 2 NM_026383 refGene chr4 134650829 - 98090 graph_last 1 14 aactgttttt 1032 0.774871596554963 0.222222222222222 2 9 3 3 NM_019967 refGene chr4 67236071 + 93999 graph_last l 7 32 aagaagggtc 1033 0.774871596554963 0.166666666666667 1 6 1 2 aagaatgctt 1034 0.774871596554963 0.333333333333333 4 12 5 4 NM_026902 refGene chrX 29777112 + 147988 graph_last l 31 95 aagacaaagc 1035 0.774871596554963 0.461538461538462 12 26 16 9 NM_146200 refGene chr7 118708396 - 125113 graph_last l 12 36 aagattcgag 1036 0.774871596554963 Inf 9 0 12 0 NM_007597 refGene chr11 49920656 + 19666 graph_last 0 4 aagccagctc 1037 0.774871596554963 0.166666666666667 1 6 1 2 aagcctcatt 1038 0.774871596554963 0.5 13 26 17 9 NM_016706 refGene chr11 88575162 + 22945 graph_last l 4 14 aagctaaagg 1039 0.774871596554963 0.222222222222222 2 9 3 3 NM_008198 refGene chr17 34516598 + 58890 graph_last l 9 34 aagctggatt 1040 0.774871596554963 0.333333333333333 4 12 5 4 aaggagtttg 1041 0.774871596554963 Inf 9 0 12 0 NM_011129 refGene chr11 87149368 + 22798 graph_second 3 12 aaggccctgc 1042 0.774871596554963 0.222222222222222 2 9 3 3 NM_007714 refGene chr11 50906857 + 19742 graph_last l 21 77 aaggttgact 1043 0.774871596554963 Inf 9 0 12 0 C85381 all_est chr14 29267547 + 40403 graph_last l 6 17 aagtatgtct 1044 0.774871596554963 0.166666666666667 1 6 1 2 aagtttctga 1045 0.774871596554963 0.166666666666667 1 6 1 2 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 1046 0.774871596554963 0.571428571428571 20 35 26 12 NM_178750 refGene chr2 179880965 + 82347 graph_last l 6 11 aatgtttgaa 1047 0.774871596554963 0.166666666666667 1 6 1 2 NM_008817 refGene chr7 6530850 + 118679 graph_last l 27 91 acaagtgcgt 1048 0.774871596554963 0.222222222222222 2 9 3 3 acaattctgt 1049 0.774871596554963 0.166666666666667 1 6 1 2 NM_019694 refGene chr5 32253922 - 101815 graph_last l 22 61 acacacaaga 1050 0.774871596554963 0.222222222222222 2 9 3 3 NM_013672 refGene chr15 104525817 + 50259 graph_last 2 8 acacatcaag 1051 0.774871596554963 0.166666666666667 1 6 1 2 NM_023275 refGene chr12 71318134 + 28940 graph_last 2 9 acaccccttc 1052 0.774871596554963 0.166666666666667 1 6 1 2 NM_008098 refGene chr6 35451107 - 111690 graph_last 1 9 acacttaatg 1053 0.774871596554963 0.166666666666667 1 6 1 2 acagccgtgg 1054 0.774871596554963 Inf 10 0 13 0 acattggagg 1055 0.774871596554963 0.166666666666667 1 6 1 2 AB017136 knownGene chr7 73844109 - 122530 graph_last l 3 12 acattgtcaa 1056 0.774871596554963 0.166666666666667 1 6 1 2 BB754985 all_est chr6 122632802 - 116716 graph_last l 12 30 acccacaaga 1057 0.774871596554963 0.166666666666667 1 6 1 2 acccctgacc 1058 0.774871596554963 2.66666666666667 24 9 31 3 NM_130450 refGene chr3 133254904 + 89233 graph_last 5 27 accgggctgg 1059 0.774871596554963 0.166666666666667 1 6 1 2 NM_008144 refGene chr19 9160629 - 67907 graph_last l 15 68 acctgcgcct 1060 0.774871596554963 0.222222222222222 2 9 3 3 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 1061 0.774871596554963 0.222222222222222 2 9 3 3 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 1062 0.774871596554963 3.33333333333333 20 6 26 2 NM_172618 refGene chr17 29853960 - 58475 graph_last l 8 31 acgggctcac 1063 0.774871596554963 0.166666666666667 1 6 1 2 NM_183426 refGene chr10 82360772 - 14035 graph_last l 3 7 actactgagg 1064 0.774871596554963 0.166666666666667 1 6 1 2 NM_007983 refGene chr4 108821615 + 96076 graph_last 5 35 actgagaggt 1065 0.774871596554963 0.222222222222222 2 9 3 3 agaaagaaaa 1066 0.774871596554963 0.166666666666667 1 6 1 2 NM_021368 refGene chr2 90387387 - 76683 graph_last 0 10 agaaagctct 1067 0.774871596554963 0.166666666666667 1 6 1 2 NM_145100 refGene chr1 128567666 - 5845 graph_last l 4 32 agaacaaaaa 1068 0.774871596554963 0.166666666666667 1 6 1 2 agaaggactt 1069 0.774871596554963 0.166666666666667 1 6 1 2 NM_024185 refGene chr2 12350814 - 72035 graph_last l 11 27 agaatctcta 1070 0.774871596554963 0.222222222222222 2 9 3 3 NM_013557 refGene chr5 142779334 + 108344 graph_last l 5 18 agactcaatt 1071 0.774871596554963 0.166666666666667 1 6 1 2 NM_019699 refGene chr19 9948273 - 67959 graph_last l 3 19 agactgaagt 1072 0.774871596554963 0.166666666666667 1 6 1 2 NM_007487 refGene chr12 34890884 - 27279 graph_last l 3 13 agagaaatct 1073 0.774871596554963 0.166666666666667 1 6 1 2 NM_145527 refGene chr2 91753611 - 76816 graph_last l 13 36 agaggacgga 1074 0.774871596554963 0.222222222222222 2 9 3 3 agagtaagaa 1075 0.774871596554963 0.166666666666667 1 6 1 2 agatccaact 1076 0.774871596554963 0.166666666666667 1 6 1 2 NM_134094 refGene chr15 38059520 + 46351 graph_last l 9 35 agattttcct 1077 0.774871596554963 0.166666666666667 1 6 1 2 NM_024457 refGene chr10 120856568 + 16149 graph_last 2 9 agcaagcaag 1078 0.774871596554963 0.166666666666667 1 6 1 2 NM_018766 refGene chr2 180356067 + 82383 graph_last l 2 10 agcccagtcg 1079 0.774871596554963 0.166666666666667 1 6 1 2 agccctttgt 1080 0.774871596554963 0.166666666666667 1 6 1 2 agcgtggtgg 1081 0.774871596554963 0.166666666666667 1 6 1 2 AK011294 knownGene chr9 125527317 + 142378 graph_last 0 7 aggaaagtgg 1082 0.774871596554963 0.166666666666667 1 6 1 2 BX631115 all_est chr13 46275336 - 34561 graph_last l 17 31 aggaacagat 1083 0.774871596554963 0.222222222222222 2 9 3 3 aggaactgta 1084 0.774871596554963 0.166666666666667 1 6 1 2 aggacaaaat 1085 0.774871596554963 0.166666666666667 1 6 1 2 aggacaatat 1086 0.774871596554963 0.166666666666667 1 6 1 2 aggcccaggg 1087 0.774871596554963 0.166666666666667 1 6 1 2 NM_020591 refGene chr11 68913064 + 21005 graph_last l 17 35 aggccttatt 1088 0.774871596554963 0.166666666666667 1 6 1 2 NM_011969 refGene chr2 179848177 - 82346 graph_last l 53 162 aggcgggatc 1089 0.774871596554963 2.66666666666667 24 9 31 3 NM_007492 refGene chrX 83030764 + 149915 graph_last l 3 13 aggctggacc 1090 0.774871596554963 0.166666666666667 1 6 1 2 NM_175930 refGene chr12 113764797 + 31667 graph_last l 10 25 agggagggtg 1091 0.774871596554963 0.222222222222222 2 9 3 3 AK005166 knownGene chr9 111425243 + 141435 graph_last l 19 60 agggccagga 1092 0.774871596554963 Inf 9 0 12 0 agggctgtgt 1093 0.774871596554963 0.166666666666667 1 6 1 2 NM_172442 refGene chr19 12338492 - 68140 graph_last l 9 34 aggtgtacgt 1094 0.774871596554963 0.166666666666667 1 6 1 2 NM_027672 refGene chr1 180660989 - 8783 graph_last 0 8 aggttaattt 1095 0.774871596554963 0.166666666666667 1 6 1 2 NM_026796 refGene chr1 193544197 - 9569 graph_last 1 31 agttcacaga 1096 0.774871596554963 0.166666666666667 1 6 1 2 agtttgagga 1097 0.774871596554963 0.166666666666667 1 6 1 2 ataacagatt 1098 0.774871596554963 0.222222222222222 2 9 3 3 NM_181400 refGene chr3 111784441 + 88334 graph_last l 6 22 ataatttaaa 1099 0.774871596554963 0.222222222222222 2 9 3 3 NM_144866 refGene chr18 35061604 - 63809 graph_last l 4 19 atacatttag 1100 0.774871596554963 0.166666666666667 1 6 1 2 atacttggaa 1101 0.774871596554963 0.166666666666667 1 6 1 2 atagaggcaa 1102 0.774871596554963 3.33333333333333 20 6 26 2 atagcatctg 1103 0.774871596554963 0.333333333333333 4 12 5 4 NM_144791 refGene chr1 159512864 + 7462 graph_last 2 10 atagttttta 1104 0.774871596554963 0.166666666666667 1 6 1 2 NM_025333 refGene chr19 10425016 - 68003 graph_last l 5 15 atcaaaaagc 1105 0.774871596554963 0.222222222222222 2 9 3 3 atcaaccccg 1106 0.774871596554963 0.166666666666667 1 6 1 2 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 1107 0.774871596554963 0.222222222222222 2 9 3 3 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 1108 0.774871596554963 Inf 9 0 12 0 NM_019392 refGene chr2 120088134 + 78448 graph_last l 17 40 atgaccctta 1109 0.774871596554963 0.166666666666667 1 6 1 2 NM_172679 refGene chr3 37892046 + 84290 graph_last 2 12 atgccagaac 1110 0.774871596554963 0.166666666666667 1 6 1 2 atggaggcag 1111 0.774871596554963 0.166666666666667 1 6 1 2 atggaggtgc 1112 0.774871596554963 0.166666666666667 1 6 1 2 atggctcata 1113 0.774871596554963 0.166666666666667 1 6 1 2 NM_009408 refGene chr2 161336122 + 81031 graph_last 4 28 atgggaaaat 1114 0.774871596554963 0.222222222222222 2 9 3 3 NM_178616 refGene chr11 80044389 - 22179 graph_last l 3 15 atggggagag 1115 0.774871596554963 0.166666666666667 1 6 1 2 atgtctcccc 1116 0.774871596554963 0.166666666666667 1 6 1 2 attaaagatg 1117 0.774871596554963 0.166666666666667 1 6 1 2 NM_024428 refGene chr17 74875697 - 61150 graph_last l 10 34 attcccctcc 1118 0.774871596554963 0.222222222222222 2 9 3 3 NM_027867 refGene chr12 51216745 + 28087 graph_last l 6 29 attccgttag 1119 0.774871596554963 0.222222222222222 2 9 3 3 NM_009861 refGene chr4 136099316 - 98237 graph_last l 16 71 attctttata 1120 0.774871596554963 0.411764705882353 7 17 9 6 genomic chr19 16287295 + 0 unique_long l 5 13 attgtaaatt 1121 0.774871596554963 0.166666666666667 1 6 1 2 NM_008380 refGene chr13 15845809 + 32859 graph_last 5 12 attgtggagg 1122 0.774871596554963 0.166666666666667 1 6 1 2 atttattact 1123 0.774871596554963 0.166666666666667 1 6 1 2 AK089775 knownGene chr5 141866215 + 108266 graph_last 2 25 atttcacttt 1124 0.774871596554963 0.222222222222222 2 9 3 3 atttgtcagt 1125 0.774871596554963 0.166666666666667 1 6 1 2 NM_026137 refGene chrX 6684053 - 147079 graph_last l 23 110 attttggggg 1126 0.774871596554963 0.4 8 20 11 7 caaaagaagg 1127 0.774871596554963 Inf 9 0 12 0 caaaggttaa 1128 0.774871596554963 0.166666666666667 1 6 1 2 genomic chr19 36982476 + 0 unique_long l 48 116 caaataaact 1129 0.774871596554963 0.222222222222222 2 9 3 3 NM_027102 refGene chr9 38317297 - 136530 graph_last l 4 15 caaatgcgat 1130 0.774871596554963 0.166666666666667 1 6 1 2 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 1131 0.774871596554963 Inf 9 0 12 0 genomic chr4 115609301 - 0 unique_long l 2 5 caaccctccc 1132 0.774871596554963 0.166666666666667 1 6 1 2 NM_029572 refGene chr4 47808889 - 93063 graph_last 1 7 caagcggaag 1133 0.774871596554963 0.166666666666667 1 6 1 2 AA388134 all_est chr8 83911423 + 131702 graph_last l 7 19 caatctacaa 1134 0.774871596554963 0.166666666666667 1 6 1 2 cacaaataaa 1135 0.774871596554963 0.166666666666667 1 6 1 2 NM_011914 refGene chr5 32400449 + 101823 graph_second 0 4 cacaaggaga 1136 0.774871596554963 0.166666666666667 1 6 1 2 cacaaggccc 1137 0.774871596554963 0.166666666666667 1 6 1 2 genomic chrX 132063425 - 0 unique_long l 5 13 cacaatccat 1138 0.774871596554963 0.166666666666667 1 6 1 2 cacacacaca 1139 0.774871596554963 0.5 13 26 17 9 caccaccggt 1140 0.774871596554963 0.166666666666667 1 6 1 2 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 1141 0.774871596554963 Inf 9 0 12 0 NM_175143 refGene chr9 111179378 + 141397 graph_last l 4 10 cactgaggtg 1142 0.774871596554963 0.166666666666667 1 6 1 2 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 1143 0.774871596554963 0.68 51 75 67 26 NM_199446 refGene chr8 86956517 + 131989 graph_last l 6 14 cagaaagagt 1144 0.774871596554963 0.166666666666667 1 6 1 2 cagactcagg 1145 0.774871596554963 0.166666666666667 1 6 1 2 cagactttgt 1146 0.774871596554963 0.166666666666667 1 6 1 2 NM_016876 refGene chr9 21445046 - 135590 graph_last 32 95 cagccaaacc 1147 0.774871596554963 Inf 10 0 13 0 AK083408 knownGene chr9 106733089 + 141052 graph_last 0 3 cagcccctgg 1148 0.774871596554963 0.166666666666667 1 6 1 2 cagctgaagc 1149 0.774871596554963 0.166666666666667 1 6 1 2 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 1150 0.774871596554963 0.222222222222222 2 9 3 3 caggaggcag 1151 0.774871596554963 0.166666666666667 1 6 1 2 caggctaaac 1152 0.774871596554963 0.166666666666667 1 6 1 2 AK084677 all_mrna chr10 8658989 - 10203 graph_last 0 7 caggctcaca 1153 0.774871596554963 0.166666666666667 1 6 1 2 NM_013525 refGene chr1 164605371 + 7804 graph_last l 31 97 cagtgactgc 1154 0.774871596554963 Inf 10 0 13 0 NM_008942 refGene chr11 96789914 - 23504 graph_last l 26 58 cataagaggt 1155 0.774871596554963 0.222222222222222 2 9 3 3 NM_176988 refGene chr14 15383289 + 39424 graph_last 1 12 cataatattt 1156 0.774871596554963 0.166666666666667 1 6 1 2 BM570588 all_est chrX 118503773 + 151346 graph_last 3 6 cataatgtag 1157 0.774871596554963 0.166666666666667 1 6 1 2 catcagtcat 1158 0.774871596554963 0.166666666666667 1 6 1 2 NM_020591 refGene chr11 68913687 + 21005 graph_last l 52 114 catctgtggg 1159 0.774871596554963 0.166666666666667 1 6 1 2 NM_133722 refGene chr7 76354571 - 122669 graph_last 1 7 cattgaagaa 1160 0.774871596554963 0.166666666666667 1 6 1 2 cattgctttt 1161 0.774871596554963 0.166666666666667 1 6 1 2 ccaaaccaaa 1162 0.774871596554963 0.166666666666667 1 6 1 2 ccaagtggag 1163 0.774871596554963 0.166666666666667 1 6 1 2 BB825602 all_est chr6 39249470 - 111946 graph_last 0 35 ccaccactgg 1164 0.774871596554963 0.166666666666667 1 6 1 2 NM_177735 refGene chr5 143487678 - 108399 graph_last l 31 144 ccaccattgt 1165 0.774871596554963 0.222222222222222 2 9 3 3 ccagaaatta 1166 0.774871596554963 0.166666666666667 1 6 1 2 ccaggagagg 1167 0.774871596554963 0.552631578947368 21 38 27 13 genomic chr6 122210626 - 0 unique_long l 9 27 ccagggaggg 1168 0.774871596554963 0.166666666666667 1 6 1 2 NM_178392 refGene chr12 69903706 + 28896 graph_last l 13 23 ccataggcca 1169 0.774871596554963 0.166666666666667 1 6 1 2 ccattttctg 1170 0.774871596554963 5 15 3 20 1 cccagcctaa 1171 0.774871596554963 0.166666666666667 1 6 1 2 cccagctcca 1172 0.774871596554963 0.166666666666667 1 6 1 2 AK051528 all_mrna chr11 116477631 + 25266 graph_last 1 7 cccgtgaggc 1173 0.774871596554963 0.222222222222222 2 9 3 3 NM_172993 refGene chr15 55148541 - 47003 graph_last 11 45 ccctcagtgc 1174 0.774871596554963 0.333333333333333 4 12 5 4 NM_172948 refGene chr11 116492226 + 25261 graph_last l 15 54 ccctcctcca 1175 0.774871596554963 0.478260869565217 11 23 14 8 NM_027629 refGene chr7 92444160 + 123455 graph_last l 8 29 ccgaaggttc 1176 0.774871596554963 0.166666666666667 1 6 1 2 NM_021420 refGene chr2 164668293 - 81249 graph_last l 7 38 ccgccaaggg 1177 0.774871596554963 0.166666666666667 1 6 1 2 NM_007828 refGene chr10 83563948 + 14173 graph_last b 8 51 ccgcgcaaca 1178 0.774871596554963 0.352941176470588 6 17 8 6 cctgaagatg 1179 0.774871596554963 0.166666666666667 1 6 1 2 NM_025954 refGene chr17 24066635 + 57798 graph_last l 9 22 cctgaagctg 1180 0.774871596554963 0.166666666666667 1 6 1 2 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 1181 0.774871596554963 0.411764705882353 7 17 9 6 cctgctctga 1182 0.774871596554963 0.166666666666667 1 6 1 2 cctgggcacc 1183 0.774871596554963 Inf 10 0 13 0 NM_007638 refGene chr6 86813362 - 114502 graph_last l 24 80 ccttattgtg 1184 0.774871596554963 0.411764705882353 7 17 9 6 NM_134155 refGene chr19 4862180 + 67492 graph_last l 26 73 ccttcgccct 1185 0.774871596554963 0.166666666666667 1 6 1 2 cctttagttc 1186 0.774871596554963 0.166666666666667 1 6 1 2 NM_026776 refGene chr11 100923203 + 23949 graph_last l 21 52 cgcctgcaca 1187 0.774871596554963 0.166666666666667 1 6 1 2 NM_016967 refGene chr16 92582327 + 55982 graph_last 3 102 cgcgctccct 1188 0.774871596554963 0.166666666666667 1 6 1 2 cggagaccct 1189 0.774871596554963 Inf 9 0 12 0 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 1190 0.774871596554963 5 15 3 19 1 NM_009876 refGene chr7 135531689 - 126263 graph_last 2 36 cgtggatccc 1191 0.774871596554963 Inf 9 0 12 0 NM_028835 refGene chr6 116538523 + 116215 graph_second 0 176 ctaaaaaaaa 1192 0.774871596554963 Inf 9 0 12 0 NM_030225 refGene chr12 81129920 - 29823 graph_last l 7 14 ctaccagtgg 1193 0.774871596554963 0.166666666666667 1 6 1 2 ctacgttctc 1194 0.774871596554963 5 15 3 19 1 NM_177561 refGene chr5_random 22728668 + 109447 graph_second l 5 13 ctactgtaac 1195 0.774871596554963 0.166666666666667 1 6 1 2 ctaggcaaac 1196 0.774871596554963 0.166666666666667 1 6 1 2 ctaggctttt 1197 0.774871596554963 0.166666666666667 1 6 1 2 NM_008060 refGene chr19 9055901 - 67898 graph_last l 6 47 ctcactcttt 1198 0.774871596554963 Inf 10 0 13 0 ctctatttaa 1199 0.774871596554963 0.222222222222222 2 9 3 3 NM_028194 refGene chr5 72743176 - 103784 graph_last l 6 13 ctctgagaag 1200 0.774871596554963 0.222222222222222 2 9 3 3 ctctgatgtg 1201 0.774871596554963 0.222222222222222 2 9 3 3 AK122307 knownGene chr11 102139984 - 24096 graph_last l 14 27 ctctggccgc 1202 0.774871596554963 0.166666666666667 1 6 1 2 NM_172522 refGene chr9 67087884 - 138600 graph_last l 34 78 ctctgtattt 1203 0.774871596554963 0.222222222222222 2 9 3 3 NM_146168 refGene chr6 58215121 - 113087 graph_last l 15 65 ctctttcttg 1204 0.774871596554963 0.411764705882353 7 17 9 6 NM_025434 refGene chr3 8973474 - 82960 graph_last l 7 27 ctgagacact 1205 0.774871596554963 0.166666666666667 1 6 1 2 NM_023465 refGene chr4 147658869 + 99296 graph_last l 13 28 ctgaggaaga 1206 0.774871596554963 0.333333333333333 4 12 5 4 genomic chr2 127510118 - 0 unique_long l 2 13 ctgcaggcct 1207 0.774871596554963 0.222222222222222 2 9 3 3 NM_028036 refGene chr18 36854954 - 64013 graph_last 0 30 ctgccctcca 1208 0.774871596554963 0.166666666666667 1 6 1 2 NM_153160 refGene chr4 129229717 - 97566 graph_last l 15 49 ctggagcccc 1209 0.774871596554963 0.166666666666667 1 6 1 2 NM_007990 refGene chr19 6104038 + 67634 graph_last l 18 60 ctgggaggta 1210 0.774871596554963 Inf 9 0 12 0 NM_023134 refGene chr14 35775081 + 40665 graph_last 0 51 ctgtcagtgg 1211 0.774871596554963 0.4 8 20 11 7 ctgtcatttg 1212 0.774871596554963 3.16666666666667 19 6 25 2 ctgtggctgt 1213 0.774871596554963 0.166666666666667 1 6 1 2 NM_134084 refGene chr14 20493077 + 39757 graph_last l 8 27 ctgttctcaa 1214 0.774871596554963 0.166666666666667 1 6 1 2 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 1215 0.774871596554963 2.05 41 20 53 7 AK129466 knownGene chr6 86810887 + 114500 graph_last l 11 33 cttatgcagg 1216 0.774871596554963 0.166666666666667 1 6 1 2 NM_011767 refGene chr15_random 2842098 - 50489 graph_last l 29 66 cttatgtctt 1217 0.774871596554963 0.222222222222222 2 9 3 3 cttcccactg 1218 0.774871596554963 0.222222222222222 2 9 3 3 NM_007575 refGene chr16 10024134 - 51425 graph_last l 16 44 cttccctggc 1219 0.774871596554963 0.222222222222222 2 9 3 3 cttgcttcca 1220 0.774871596554963 0.166666666666667 1 6 1 2 NM_011239 refGene chr16 17888859 - 52007 graph_last 0 5 cttgtccctt 1221 0.774871596554963 0.166666666666667 1 6 1 2 NM_023162 refGene chr17 36706080 - 59095 graph_last l 13 56 ctttgttctc 1222 0.774871596554963 Inf 9 0 12 0 NM_153056 refGene chr11 120181405 - 25596 graph_last l 8 32 gaaaagggaa 1223 0.774871596554963 0.222222222222222 2 9 3 3 gaaaggaaac 1224 0.774871596554963 Inf 10 0 13 0 NM_012014 refGene chr13 54519110 - 35074 graph_last l 11 43 gaaaggtcag 1225 0.774871596554963 0.352941176470588 6 17 8 6 NM_175015 refGene chr2 74302832 - 75802 graph_last 354 852 gaaatatatg 1226 0.774871596554963 0.612244897959184 30 49 39 17 NM_146157 refGene chr4 138361968 + 98421 graph_last l 6 28 gaaatgagat 1227 0.774871596554963 0.222222222222222 2 9 3 3 NM_023324 refGene chr11 21048347 + 18098 graph_last 1 4 gaaatgtttg 1228 0.774871596554963 0.166666666666667 1 6 1 2 CF540728 all_est chr16 35052211 + 53196 graph_last l 11 58 gaaattgaaa 1229 0.774871596554963 0.166666666666667 1 6 1 2 NM_153133 refGene chr10 131093549 - 16719 graph_last 0 11 gaacacacag 1230 0.774871596554963 0.166666666666667 1 6 1 2 CD771683 all_est chr6 6542670 - 110151 graph_last l 2 5 gaacatcttc 1231 0.774871596554963 0.166666666666667 1 6 1 2 gaacttgcta 1232 0.774871596554963 0.166666666666667 1 6 1 2 gaagatgctc 1233 0.774871596554963 0.166666666666667 1 6 1 2 gaaggaacaa 1234 0.774871596554963 0.45 9 20 12 7 NM_011596 refGene chr5_random 46602863 + 109932 graph_last l 14 40 gaaggactag 1235 0.774871596554963 0.166666666666667 1 6 1 2 gaagtactat 1236 0.774871596554963 2.41666666666667 29 12 38 4 NM_009129 refGene chr1 81220284 - 3857 graph_last l 55 117 gaattgatga 1237 0.774871596554963 0.222222222222222 2 9 3 3 NM_026110 refGene chr16 92290052 - 55957 graph_last l 22 88 gaatttttac 1238 0.774871596554963 0.166666666666667 1 6 1 2 NM_031842 refGene chr15 101661502 + 49950 graph_last l 28 76 gaccaaaatt 1239 0.774871596554963 Inf 9 0 12 0 NM_031997 refGene chr19 22001220 - 68613 graph_last 1 9 gacgaagctg 1240 0.774871596554963 0.166666666666667 1 6 1 2 NM_022433 refGene chr7 132862759 - 126014 graph_last 12 31 gactcagatt 1241 0.774871596554963 0.166666666666667 1 6 1 2 gagaactttg 1242 0.774871596554963 0.166666666666667 1 6 1 2 NM_146157 refGene chr4 138248385 + 98421 graph_second 0 5 gagaagtgct 1243 0.774871596554963 0.166666666666667 1 6 1 2 NM_018770 refGene chr9 49855196 - 137345 graph_last l 14 48 gagacactaa 1244 0.774871596554963 0.333333333333333 4 12 5 4 NM_026238 refGene chr17 25379974 - 57923 graph_last 37 99 gagccctata 1245 0.774871596554963 0.333333333333333 4 12 5 4 gagctggtga 1246 0.774871596554963 Inf 9 0 12 0 AK077572 knownGene chr19 38237960 - 69610 graph_last l 21 51 gagtgattgt 1247 0.774871596554963 Inf 10 0 13 0 NM_133850 refGene chr2_random 3147483 - 82601 graph_last l 10 22 gagtgcctca 1248 0.774871596554963 0.166666666666667 1 6 1 2 gagttttata 1249 0.774871596554963 0.166666666666667 1 6 1 2 gatcaagagg 1250 0.774871596554963 0.166666666666667 1 6 1 2 NM_011749 refGene chr16 33229185 + 53033 graph_last 7 21 gatccagagc 1251 0.774871596554963 0.166666666666667 1 6 1 2 NM_011766 refGene chr15 41386574 - 46546 graph_last 0 16 gatggaataa 1252 0.774871596554963 0.166666666666667 1 6 1 2 NM_054050 refGene chr2 30009731 + 73157 graph_last 0 4 gatgtcctca 1253 0.774871596554963 0.166666666666667 1 6 1 2 gatttcccag 1254 0.774871596554963 0.352941176470588 6 17 8 6 NM_028259 refGene chr11 86062939 - 22667 graph_last 0 9 gattttaaaa 1255 0.774871596554963 0.222222222222222 2 9 3 3 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 1256 0.774871596554963 3.33333333333333 20 6 26 2 NM_028658 refGene chr17 89388037 - 62048 graph_last 1 8 gcaagggaga 1257 0.774871596554963 0.166666666666667 1 6 1 2 gcacagcgct 1258 0.774871596554963 0.166666666666667 1 6 1 2 AI413427 all_est chr6 93301756 - 115026 graph_last l 8 18 gcaccactgt 1259 0.774871596554963 0.166666666666667 1 6 1 2 NM_031174 refGene chr16 98603445 - 56375 graph_last l 10 55 gcacctgatg 1260 0.774871596554963 0.166666666666667 1 6 1 2 genomic chr5 147553463 + 0 unique_long l 7 19 gcactgacag 1261 0.774871596554963 0.166666666666667 1 6 1 2 gcagagacat 1262 0.774871596554963 0.166666666666667 1 6 1 2 gcagcaacca 1263 0.774871596554963 0.166666666666667 1 6 1 2 NM_010699 refGene chr7 39733122 + 120908 graph_last 0 7 gcagcctctt 1264 0.774871596554963 0.166666666666667 1 6 1 2 NM_007733 refGene chr1 24938231 + 1003 graph_last l 6 18 gccattaaaa 1265 0.774871596554963 0.166666666666667 1 6 1 2 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 1266 0.774871596554963 Inf 9 0 12 0 gccccaggag 1267 0.774871596554963 0.222222222222222 2 9 3 3 gcctctgctg 1268 0.774871596554963 0.166666666666667 1 6 1 2 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 1269 0.774871596554963 0.166666666666667 1 6 1 2 gcctgcaaac 1270 0.774871596554963 0.166666666666667 1 6 1 2 NM_009503 refGene chr4 42270287 - 92606 graph_last l 69 237 gcctgttcca 1271 0.774871596554963 2.33333333333333 28 12 37 4 NM_025567 refGene chr15 77978170 + 48141 graph_last l 205 434 gccttctcag 1272 0.774871596554963 0.5 13 26 17 9 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 1273 0.774871596554963 1.46153846153846 114 78 149 27 gcgaagctca 1274 0.774871596554963 0.709090909090909 78 110 102 38 gcggcagcgc 1275 0.774871596554963 0.166666666666667 1 6 1 2 gcggcggctc 1276 0.774871596554963 0.166666666666667 1 6 1 2 gcggcggggc 1277 0.774871596554963 5 15 3 19 1 AA139939 all_est chr3 90376105 - 86642 graph_last 0 39 gcgggggtgc 1278 0.774871596554963 Inf 10 0 13 0 genomic chr1 81489580 - 0 unique_long l 4 20 gctaacaagg 1279 0.774871596554963 0.222222222222222 2 9 3 3 gctccagcct 1280 0.774871596554963 0.166666666666667 1 6 1 2 gctccagctg 1281 0.774871596554963 Inf 10 0 13 0 gctccctctg 1282 0.774871596554963 2.21428571428571 31 14 41 5 NM_134118 refGene chr8 84313000 - 131727 graph_last l 128 671 gctctccagc 1283 0.774871596554963 0.622950819672131 38 61 50 21 gctctttggg 1284 0.774871596554963 0.166666666666667 1 6 1 2 gctgccctaa 1285 0.774871596554963 Inf 9 0 12 0 gctgtcacct 1286 0.774871596554963 0.222222222222222 2 9 3 3 gctgttaaag 1287 0.774871596554963 0.166666666666667 1 6 1 2 NM_011512 refGene chr2 27188956 + 72967 graph_last l 13 32 gctttctctg 1288 0.774871596554963 0.166666666666667 1 6 1 2 gctttgcttt 1289 0.774871596554963 0.166666666666667 1 6 1 2 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 1290 0.774871596554963 0.411764705882353 7 17 9 6 NM_024439 refGene chr7 58524814 + 121731 graph_last l 35 65 gcttttatgg 1291 0.774871596554963 0.222222222222222 2 9 3 3 gcttttggag 1292 0.774871596554963 0.222222222222222 2 9 3 3 NM_007838 refGene chr4 137089926 + 98329 graph_last 18 45 ggaaaatggc 1293 0.774871596554963 0.166666666666667 1 6 1 2 ggaaacaggg 1294 0.774871596554963 0.166666666666667 1 6 1 2 NM_016679 refGene chr9 21798794 - 135629 graph_last l 4 46 ggaataaaga 1295 0.774871596554963 0.333333333333333 4 12 5 4 NM_026614 refGene chr6 24390570 - 110909 graph_last 71 261 ggagccattg 1296 0.774871596554963 0.5 13 26 17 9 NM_007705 refGene chr10 82481863 + 14053 graph_last 2 14 ggaggatggc 1297 0.774871596554963 0.166666666666667 1 6 1 2 NM_010880 refGene chr1 88232617 - 4315 graph_last l 6 16 ggaggctaaa 1298 0.774871596554963 0.166666666666667 1 6 1 2 NM_028791 refGene chr17 29335946 + 58381 graph_last l 16 43 ggaggtccct 1299 0.774871596554963 0.222222222222222 2 9 3 3 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 1300 0.774871596554963 3.33333333333333 20 6 26 2 NM_008323 refGene chrX 63381310 - 149194 graph_second 0 21 ggcaacagga 1301 0.774871596554963 0.222222222222222 2 9 3 3 ggcaatcacc 1302 0.774871596554963 0.411764705882353 7 17 9 6 NM_025349 refGene chr10 83218075 + 14139 graph_second 7 67 ggcaatttta 1303 0.774871596554963 Inf 9 0 12 0 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 1304 0.774871596554963 0.622950819672131 38 61 50 21 ggcccgtgtg 1305 0.774871596554963 0.166666666666667 1 6 1 2 NM_172513 refGene chr1 60129766 + 2651 graph_last 36 129 ggcggctttg 1306 0.774871596554963 Inf 9 0 12 0 ggcgtcatcg 1307 0.774871596554963 3.33333333333333 20 6 26 2 ggctgcccta 1308 0.774871596554963 0.222222222222222 2 9 3 3 ggcttcgggt 1309 0.774871596554963 0.166666666666667 1 6 1 2 gggaacgcac 1310 0.774871596554963 Inf 9 0 12 0 gggaatgatg 1311 0.774871596554963 0.166666666666667 1 6 1 2 NM_026823 refGene chr1 138074987 - 6492 graph_last 1 5 gggacaacca 1312 0.774871596554963 0.166666666666667 1 6 1 2 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 1313 0.774871596554963 2 40 20 52 7 gggccctcct 1314 0.774871596554963 0.166666666666667 1 6 1 2 gggcctgctc 1315 0.774871596554963 0.222222222222222 2 9 3 3 NM_021387 refGene chr7 33471175 + 120436 graph_last l 8 34 gggcgccaag 1316 0.774871596554963 0.166666666666667 1 6 1 2 AK017387 knownGene chr16 90850534 - 55851 graph_second 0 4 gggctctggc 1317 0.774871596554963 0.166666666666667 1 6 1 2 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 1318 0.774871596554963 Inf 10 0 13 0 gggtttaatg 1319 0.774871596554963 0.166666666666667 1 6 1 2 NM_172736 refGene chr7 4015506 - 118503 graph_second l 3 11 ggtagagcag 1320 0.774871596554963 0.166666666666667 1 6 1 2 CB526906 all_est chr8 27613070 - 128862 graph_last 1 10 ggtataatga 1321 0.774871596554963 0.166666666666667 1 6 1 2 ggtcccctcc 1322 0.774871596554963 0.166666666666667 1 6 1 2 ggtgaagctg 1323 0.774871596554963 0.166666666666667 1 6 1 2 ggtgcccaga 1324 0.774871596554963 0.166666666666667 1 6 1 2 NM_138579 refGene chr15 80350321 - 48365 graph_last 0 5 ggtggcgctg 1325 0.774871596554963 0.166666666666667 1 6 1 2 ggttttcaag 1326 0.774871596554963 2.41666666666667 29 12 38 4 NM_008991 refGene chr3 125173184 + 88838 graph_last 0 7 gtaaaactga 1327 0.774871596554963 0.166666666666667 1 6 1 2 gtactgacat 1328 0.774871596554963 Inf 10 0 13 0 gtagaacttt 1329 0.774871596554963 0.166666666666667 1 6 1 2