gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count gtggctcaca 1 5.05765221000255e-54 2.12773722627737 1166 548 1466 572 tgtagtgtaa 2 6.32747620397498e-53 0.219451371571072 88 401 111 419 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 3 6.0678211512313e-46 4.53086419753086 367 81 461 85 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 4 1.89582709093855e-35 0.0774193548387097 12 155 15 162 gaatgatctg 5 1.52548407247881e-23 0.0128205128205128 1 78 1 81 ggtgagcctg 6 1.75134359812991e-22 19.2 96 5 121 5 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 7 2.18138469546125e-20 21.5 86 4 108 4 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 8 2.87483769314742e-18 1.48018648018648 1270 858 1596 896 ctagtctttg 9 6.54514219474249e-17 0.467391304347826 172 368 216 384 tctggacgcg 10 9.1358908899371e-17 Inf 58 0 73 0 tggatcagtc 11 2.30893278274219e-16 0.467787114845938 167 357 210 373 tcttaatgaa 12 5.68216126681915e-15 0.178217821782178 18 101 22 105 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 13 2.35071405664368e-14 0.325581395348837 56 172 70 180 gaataataaa 14 8.2054820436009e-14 0.437735849056604 116 265 146 277 aagatcaaga 15 1.29468519543403e-13 3.46511627906977 149 43 187 45 gtgctgaata 16 4.7111640119246e-13 Inf 46 0 58 0 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 17 2.52129767238801e-12 0.256637168141593 29 113 36 118 gcctaatgta 18 2.72859961821442e-12 0.453125 116 256 146 267 tgggttgtct 19 3.35116617047548e-12 0.630744849445325 398 631 500 659 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 20 1.00602093061644e-11 0.208791208791209 19 91 24 95 gccgttctta 21 1.16309772329762e-11 0.0408163265306122 2 49 3 51 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 22 2.34978924311556e-11 0.284482758620690 33 116 41 121 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 23 2.34978924311556e-11 9.14285714285714 64 7 80 7 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 24 4.59607301751749e-11 0.164383561643836 12 73 15 76 gtaagcataa 25 6.1431949123832e-11 0.441860465116279 95 215 119 224 tgtataaaaa 26 1.15087287393525e-10 0.277777777777778 30 108 38 113 attttcagtt 27 2.35099625156348e-10 42 42 1 53 1 atgtctcaaa 28 1.01146243102940e-09 0.541666666666667 169 312 213 326 cgccgccggc 29 1.11599403034288e-09 2.11111111111111 228 108 287 113 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 30 2.99768115411199e-09 1.85093167701863 298 161 375 168 BC052699 knownGene chr6 126842831 - 116923 graph_last l 137 519 aacccctgcc 31 5.35636217463449e-09 3.41379310344828 99 29 125 30 tgtactcaat 32 5.35636217463449e-09 0.488584474885845 107 219 134 229 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 33 5.79819985746794e-09 3.65384615384615 95 26 119 27 tagatatagg 34 6.50667765262438e-09 0.327433628318584 37 113 47 118 gaagtcggaa 35 1.80154513747594e-08 0 0 29 0 30 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 36 2.8992329178122e-08 0.236111111111111 17 72 21 75 agaggtgtag 37 3.18188896949324e-08 0.0588235294117647 2 34 2 36 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 38 3.18188896949324e-08 0.402877697841727 56 139 70 145 cccacaagct 39 3.33597909715850e-08 Inf 31 0 39 0 tatttgcaaa 40 3.34724292683266e-08 19 38 2 48 2 cctttaatcc 41 3.54541462402728e-08 2.68085106382979 126 47 159 49 agagtaatca 42 4.41488527273641e-08 0.186440677966102 11 59 14 62 acatcataga 43 4.64567246711477e-08 0.336538461538462 35 104 44 109 aataaactgc 44 9.08402718883702e-08 0.156862745098039 8 51 10 53 ccctgggttc 45 1.20608071174326e-07 2.37096774193548 147 62 185 65 tagagactgc 46 1.22200524493539e-07 10.5 42 4 53 4 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 47 1.22200524493539e-07 0.227272727272727 15 66 19 69 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 48 1.32848665025016e-07 4.92307692307692 64 13 80 14 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 49 1.48802959105555e-07 0.383333333333333 46 120 58 125 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 50 1.60106020614996e-07 0.301204819277108 25 83 31 87 ctaataaagc 51 1.60106020614996e-07 0.483333333333333 87 180 109 188 tctgctaaag 52 1.63923660564825e-07 18 36 2 45 2 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 53 1.79269547862068e-07 0.369369369369369 41 111 52 116 aaataaaaca 54 1.81189057580748e-07 0.0606060606060606 2 33 2 34 gagacagtga 55 2.01397104784094e-07 0.0344827586206897 1 29 1 30 gtgaaactaa 56 2.63962119698182e-07 0.566037735849057 150 265 189 277 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 57 2.63962119698182e-07 0 0 25 0 26 taagtggaat 58 2.70866357881491e-07 0.246153846153846 16 65 20 68 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 59 2.73875349241246e-07 12.3333333333333 37 3 47 3 gaggctttgc 60 2.89667881427051e-07 6.71428571428571 47 7 59 7 agaaggaggt 61 8.79072928202842e-07 0.589285714285714 165 280 207 292 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 62 8.88213918511357e-07 0.108108108108108 4 37 5 39 ttggaacaat 63 1.16225280481409e-06 0 0 23 0 24 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 64 1.17688199572793e-06 0.159090909090909 7 44 9 46 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 65 1.73343693779802e-06 4.28571428571429 60 14 76 15 gtgggcgtgt 66 1.83455999949291e-06 2.33962264150943 124 53 156 55 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 67 3.4231951918562e-06 0.04 1 25 1 26 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 68 5.28233121353399e-06 0.117647058823529 4 34 5 36 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 69 5.90882310134784e-06 0.324675324675325 25 77 32 80 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 70 7.73848115059709e-06 0.53475935828877 100 187 126 195 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 71 1.27350616296938e-05 0.0967741935483871 3 31 4 32 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 72 1.31081032294507e-05 0.290322580645161 18 62 23 65 tgataaaagt 73 1.32939761017594e-05 0.147058823529412 5 34 6 36 taataaataa 74 1.42913821442145e-05 0.166666666666667 6 36 7 38 tcaataaagc 75 1.48393207600030e-05 0.259259259259259 14 54 17 56 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 76 1.66471903872996e-05 Inf 21 0 27 0 ggcttcggtc 77 1.78152754501216e-05 0.681372549019608 278 408 350 426 ttgactttat 78 1.83928837758355e-05 0.402173913043478 37 92 46 96 taaaagaaaa 79 2.7621312279951e-05 0.318181818181818 21 66 27 69 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 80 2.93879422280349e-05 0.125 4 32 5 33 ctcaataaat 81 2.93879422280349e-05 0.08 2 25 2 26 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 82 2.97479811930271e-05 8.25 33 4 41 4 gtaaaaaaaa 83 3.12955565510494e-05 0.404494382022472 36 89 45 93 gaggctcaca 84 3.13565904140828e-05 25 25 1 31 1 ccttgctcaa 85 4.10083695764388e-05 0.285714285714286 16 56 20 58 ttataatata 86 4.17724781225473e-05 0.176470588235294 6 34 7 36 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 87 4.39820375553808e-05 0 0 18 0 19 ctacgttctc 88 4.55848583178632e-05 0.277777777777778 15 54 19 56 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 89 4.90802035877007e-05 Inf 20 0 25 0 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 90 4.90802035877007e-05 4.36363636363636 48 11 60 12 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 91 4.90802035877007e-05 0.356164383561644 26 73 33 76 ggggctcaca 92 4.90802035877007e-05 Inf 20 0 25 0 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 93 4.91666364900957e-05 0.264150943396226 14 53 18 55 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 94 5.12190273300461e-05 23 23 1 29 1 NM_144915 refGene chr5 142286412 + 108317 graph_last l 263 516 tatgaattaa 95 5.60743238238486e-05 0.265306122448980 13 49 16 51 tggctcggtc 96 6.2813080095696e-05 1.70247933884298 206 121 259 126 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 97 8.64908691589124e-05 3 66 22 83 23 NM_013874 refGene chr7 23389583 + 119824 graph_last l 36 114 gcggagcccc 98 9.42513212518523e-05 12.5 25 2 32 2 tgtaacagga 99 0.000101462715311313 0.483050847457627 57 118 72 123 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 100 0.000101462715311313 0.524475524475524 75 143 94 149 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 101 0.000119397982043199 0.181818181818182 6 33 7 34 gctttgaatg 102 0.000139970063037438 0.448979591836735 44 98 55 102 aggcagacag 103 0.000149347748290594 1.38461538461538 468 338 588 353 gtgaccgaag 104 0.000171848888551412 3.16666666666667 57 18 72 19 tcaaacttgg 105 0.000171848888551412 0.534722222222222 77 144 97 150 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 106 0.000175116335652749 0.161290322580645 5 31 6 32 NM_008266 refGene chr3 30901904 + 83909 graph_last 81 183 gtaatcctgc 107 0.000178200067234992 0.090909090909091 2 22 2 23 tactcattat 108 0.000206314108821014 0.236842105263158 9 38 11 40 gatgacacca 109 0.000218005010005474 2.17391304347826 100 46 126 48 taaataaaga 110 0.000220610189955347 0.115384615384615 3 26 4 27 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 111 0.000236643376591618 0.344827586206897 20 58 25 61 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 112 0.000241203906191149 3.11111111111111 56 18 71 19 ctgagcaaca 113 0.000246419152329261 21 21 1 26 1 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 114 0.000246419152329261 21 21 1 26 1 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 115 0.000260542891129483 12 24 2 30 2 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 116 0.000286125779977456 0.0833333333333333 2 24 3 25 taaatcaact 117 0.000286125779977456 0.166666666666667 5 30 6 31 tgtatgtctt 118 0.000320155104962819 0.205882352941176 7 34 9 36 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 119 0.000320244413315084 0.0952380952380952 2 21 2 22 ggctttggtc 120 0.000342561941260422 0 0 15 0 16 ggtcagtcgg 121 0.000383943504497229 0.12 3 25 4 26 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 122 0.000393118393127755 0.291666666666667 14 48 18 50 cctgatcttt 123 0.000397816195195704 2.37142857142857 83 35 104 37 attctccagt 124 0.000403781920468239 0.583333333333333 98 168 123 175 NM_198886 refGene chr17 34557187 + 58892 graph_last 1 33 cctcaaagag 125 0.000405467482554743 20 20 1 25 1 ttcattattg 126 0.000433807779903607 0.304347826086957 14 46 17 48 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 127 0.000464638006439166 0.32 16 50 20 52 aaaagaggaa 128 0.000465211127353693 Inf 17 0 21 0 agaaataaat 129 0.000465211127353693 0.172413793103448 5 29 6 30 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 130 0.000528569800438869 0.193548387096774 6 31 7 32 gtggcgcacg 131 0.000532246412286463 3.9 39 10 49 10 caaaatacat 132 0.00059664457836927 0.368421052631579 21 57 26 60 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 133 0.00059664457836927 5.8 29 5 37 5 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 134 0.000599332875852093 8.33333333333333 25 3 31 3 gattctccga 135 0.000671801642096604 0 0 14 0 15 NM_008634 refGene chr13 97881760 - 37324 graph_last 35 132 aaaccagagc 136 0.000673088160501393 19 19 1 24 1 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 137 0.000733786221935957 0.362068965517241 21 58 27 61 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 138 0.000861731902201379 0.368421052631579 21 57 26 59 ttaataaaag 139 0.000861731902201379 0.193548387096774 6 31 8 32 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 140 0.000861731902201379 0.2 6 30 7 31 NM_057171 refGene chr17 34807771 + 58931 graph_last l 21 121 cctgccaaga 141 0.00105357832518304 5 30 6 38 6 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 142 0.00106094023011879 3.05882352941176 52 17 65 18 ctgccccaca 143 0.00115727347875788 18 18 1 23 1 NM_024218 refGene chr16 56401884 + 54408 graph_last 37 280 aaggtcgagc 144 0.00119851066877583 4.25 34 8 43 8 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 145 0.0012868647362189 6.25 25 4 32 4 NM_007552 refGene chr2 18792200 + 72377 graph_last 0 60 cattcaaaaa 146 0.00136073558435667 0 0 13 0 14 NM_025402 refGene chr11 120775513 + 25666 graph_last l 37 68 tagagcttta 147 0.00136073558435667 0 0 13 0 14 NM_145422 refGene chr10 88338778 - 14527 graph_last l 50 161 ctattaaata 148 0.00140085400623290 0.206896551724138 6 29 7 30 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 149 0.00140627290328666 2.27272727272727 75 33 94 34 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 150 0.00142145361883855 0.581081081081081 86 148 108 154 gaagcaaaga 151 0.00157246427592678 0.389830508474576 23 59 29 62 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 152 0.00192987156670261 0.3 12 40 15 42 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 153 0.00192987156670261 0.111111111111111 2 18 2 19 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 154 0.00192987156670261 18 18 1 22 1 ggcagccccc 155 0.00192987156670261 18 18 1 22 1 gtagtggaag 156 0.00192987156670261 0.3 12 40 15 42 NM_031179 refGene chr1 56302543 - 2445 graph_last l 29 113 caaactgaag 157 0.00199270824227487 10.5 21 2 26 2 NM_021273 refGene chr12 107236798 - 31356 graph_last 21 68 ccggcccaga 158 0.00199270824227487 10 20 2 25 2 gtggcacaca 159 0.00199270824227487 6.25 25 4 31 4 NM_009308 refGene chr18 31773653 + 63593 graph_last l 23 112 gctacttaag 160 0.00206340161857256 0.166666666666667 4 24 5 25 gggaagtctg 161 0.00208045410608009 0.225806451612903 7 31 9 32 gcagagtgcg 162 0.00232664306973478 2.78947368421053 53 19 66 20 gaggagggtg 163 0.00246691793121534 4.83333333333333 29 6 36 6 caaaaataaa 164 0.00251037261973039 0.385964912280702 22 57 28 59 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 165 0.00251037261973039 1.97872340425532 93 47 117 49 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 166 0.00251037261973039 0.453333333333333 34 75 43 78 caacaaaacc 167 0.00255690540311541 0.1 2 20 3 21 tatgtcagta 168 0.00262666230091867 0 0 12 0 13 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 169 0.00271057131388498 3.21428571428571 45 14 56 15 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 170 0.00294106574630347 0.377358490566038 20 53 25 55 tttttaatgt 171 0.00300109880249479 0.585185185185185 79 135 99 141 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 172 0.00315802995564995 17 17 1 21 1 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 173 0.00315903299926373 0.612903225806452 95 155 119 162 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 174 0.00328042805741628 0.136363636363636 3 22 4 23 NM_018871 refGene chr5 134736729 - 107744 graph_last l 168 546 aatgtgagtc 175 0.00342180785730273 0.428571428571429 27 63 34 66 gaaaatgaga 176 0.00344494578910677 3 45 15 57 16 acccgccggg 177 0.00348290602125812 0.222222222222222 6 27 7 28 gactatatat 178 0.00348290602125812 0.222222222222222 6 27 7 28 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 179 0.00351583087779829 0.285714285714286 10 35 13 37 aacaggttca 180 0.00371005409736275 0.4875 39 80 49 84 aaaataaagg 181 0.00401413123151791 0.294117647058824 10 34 12 36 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 182 0.00405583395802298 1.52272727272727 201 132 253 138 agctcttgta 183 0.00455189321215874 0.0714285714285714 1 14 1 15 aggtgctgag 184 0.00455189321215874 Inf 14 0 17 0 BC049678 knownGene chr8 71178447 - 131010 graph_last l 24 83 cggctgtcgc 185 0.00455189321215874 Inf 14 0 17 0 NM_024456 refGene chr11 100379176 - 23873 graph_last l 76 292 taaccaatca 186 0.00462245404333519 0.305555555555556 11 36 14 38 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 187 0.00462245404333519 0.305555555555556 11 36 14 38 agattattgt 188 0.00509618523089312 0 0 11 0 12 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 189 0.00509618523089312 3.27272727272727 36 11 45 11 ttaaataaat 190 0.00509618523089312 0 0 11 0 12 BM964406 all_est chr2 37842889 - 73820 graph_last l 9 47 ttgcatttct 191 0.00509618523089312 0 0 11 0 12 tggttgctgg 192 0.00517860367786913 1.62105263157895 154 95 193 99 ctgtaaatag 193 0.00532098761143304 0.142857142857143 3 21 4 22 agagacacca 194 0.00532483908383695 5 25 5 31 5 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 195 0.00570766520760978 3.15384615384615 41 13 51 14 BE649911 all_est chr13 58923938 + 35413 graph_last l 27 89 gaatgtctct 196 0.00601210508977184 0.125 2 16 2 17 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 197 0.00618073373818155 0.363636363636364 16 44 20 46 NM_010487 refGene chr9 22639791 - 135759 graph_last l 26 97 ggatggctta 198 0.00634180035802698 7 21 3 26 3 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 199 0.00759132141495982 0.111111111111111 2 18 3 19 ccagtgcaga 200 0.00779796884590468 Inf 12 0 15 0 gctgcctaga 201 0.00779796884590468 Inf 12 0 15 0 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 202 0.00810788046107812 9 18 2 22 2 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 203 0.00810788046107812 Inf 13 0 16 0 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 204 0.008577271249396 0.35 14 40 18 42 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 205 0.008577271249396 0.35 14 40 18 42 gtaagcaaaa 206 0.00871291602152356 0.629139072847682 95 151 120 158 gctataataa 207 0.0089249521216209 0.333333333333333 12 36 15 38 NM_177301 refGene chr3 93009576 - 86949 graph_last 70 267 ggcagcacaa 208 0.00950552491143523 2.86666666666667 43 15 54 16 NM_009720 refGene chr11 55071811 - 20087 graph_last l 56 134 taataaagtc 209 0.00950552491143523 0.190476190476190 4 21 5 22 aggtcgggtg 210 0.0095630880734768 1.58333333333333 152 96 191 100 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 211 0.009848305037191 3.27272727272727 36 11 45 12 catacctgaa 212 0.00999524744573436 0.358974358974359 14 39 17 41 gcctccaagg 213 0.0100313113707500 1.53043478260870 176 115 221 120 tgtataaata 214 0.0100314442004844 0 0 11 0 11 NM_009920 refGene chr19 4914237 - 67497 graph_last l 46 301 ggggcagccc 215 0.0101938609210676 2.64705882352941 45 17 57 18 CF929608 all_est chr12 51042570 + 28064 graph_last 3 55 aattcaatta 216 0.0106801457455193 0.133333333333333 2 15 2 16 NM_015819 refGene chrX 42688995 - 148431 graph_last l 19 54 taaatcccac 217 0.0106801457455193 0.133333333333333 2 15 2 16 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 218 0.0113268730925631 5.25 21 4 27 4 tgaaaaaaaa 219 0.0120166655641406 0.43859649122807 25 57 32 59 aagccttgct 220 0.0125559854547404 3.85714285714286 27 7 34 7 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 221 0.0125559854547404 3.85714285714286 27 7 34 7 atccggcgcc 222 0.0125559854547404 3.85714285714286 27 7 34 7 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 223 0.0127816935359055 8.5 17 2 21 2 caaatccaaa 224 0.012802051935672 4.16666666666667 25 6 32 6 BC021509 knownGene chr5 129833260 - 107354 graph_last 1 33 attacagcca 225 0.0129088410359606 Inf 11 0 14 0 ctatttcaaa 226 0.0130481793948192 0.3125 10 32 12 33 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 227 0.0130481793948192 0.230769230769231 6 26 8 27 tcctgaaata 228 0.0130481793948192 0.230769230769231 6 26 8 27 tgtatttata 229 0.0136315512982834 0.25 6 24 7 25 NM_010480 refGene chr12 106260821 - 31241 graph_last 20 90 gcttagaagt 230 0.0137395071149599 14 14 1 18 1 ggctgcagcc 231 0.0137395071149599 2.85714285714286 40 14 50 15 gggacctagg 232 0.0137395071149599 2.14285714285714 60 28 76 29 gtcatagctg 233 0.0137395071149599 14 14 1 18 1 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 234 0.0137395071149599 14 14 1 18 1 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 235 0.0137395071149599 0.0769230769230769 1 13 1 14 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 236 0.0137395071149599 14 14 1 18 1 NM_029870 refGene chr17 26374491 + 58052 graph_last 0 81 ttgaatgtaa 237 0.0137395071149599 0.0769230769230769 1 13 1 14 attaagaggg 238 0.0138752572099956 0.157894736842105 3 19 4 20 cggttgctgg 239 0.0141124798134308 3 33 11 42 11 NM_011885 refGene chr7 22543696 - 119747 graph_last l 49 216 tgctgggatg 240 0.0141124798134308 0.3 9 30 11 31 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 241 0.0143694635584290 0.46551724137931 27 58 34 61 NM_009955 refGene chr14 58531839 - 42295 graph_last l 66 213 tgtgtagcca 242 0.0143694635584290 0.323529411764706 11 34 14 35 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 243 0.0146828246586662 0.2 4 20 5 21 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 244 0.0153109774612828 6.33333333333333 19 3 24 3 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 245 0.0155161916789185 0.475409836065574 29 61 37 64 ccccagccag 246 0.0155161916789185 1.50434782608696 173 115 217 120 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 247 0.0161249856261976 2.02857142857143 71 35 89 37 cacgctcccg 248 0.0164746260504197 3.22222222222222 29 9 37 9 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 249 0.0168832785385803 3.08333333333333 37 12 46 13 gcccccctct 250 0.016976734784783 3.5 28 8 35 8 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 251 0.0176663672862205 4.4 22 5 28 5 cagactttgt 252 0.0180053403771275 0.142857142857143 2 14 2 15 aaaatgttgt 253 0.0181449643140131 0 0 10 0 10 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 254 0.0181449643140131 0.32258064516129 10 31 12 32 atgatcaaaa 255 0.0181449643140131 0 0 10 0 10 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 256 0.0181449643140131 0.32258064516129 10 31 12 32 gactgtgcca 257 0.0181449643140131 3.09090909090909 34 11 43 12 gccaccgtcc 258 0.0181449643140131 0 0 10 0 10 NM_009468 refGene chr18 43986451 - 64437 graph_last 0 11 gtgctttcat 259 0.0181449643140131 0 0 10 0 10 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 260 0.0181449643140131 0 0 10 0 10 tggattcatt 261 0.0181449643140131 0 0 10 0 10 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 262 0.0186569268121744 0.378378378378378 14 37 17 39 NM_010064 refGene chr2 71555694 + 75596 graph_last l 5 69 tcggacaaaa 263 0.0186860017159530 8 16 2 20 2 AK029707 knownGene chrX 125528359 - 151570 graph_last 23 61 ttaggcagct 264 0.0186860017159530 8 16 2 20 2 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 265 0.0199323631406363 0.260869565217391 6 23 7 24 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 266 0.0199323631406363 0.260869565217391 6 23 7 24 NM_017380 refGene chr11 116867585 + 25295 graph_last l 12 43 ccctgtggcc 267 0.0199827284018251 Inf 10 0 13 0 gctccagctg 268 0.0199827284018251 Inf 10 0 13 0 gctgccctaa 269 0.0199827284018251 Inf 10 0 13 0 NM_144921 refGene chr7 19693527 - 119495 graph_last 31 49 taccctctca 270 0.0199827284018251 Inf 10 0 13 0 tgtgttgtgt 271 0.0210831832219512 0.575757575757576 57 99 72 103 NM_011879 refGene chr18 36874885 + 64015 graph_last l 54 121 ttccattaaa 272 0.0212400160957491 0.238095238095238 5 21 6 22 NM_018745 refGene chr15 39066010 - 46428 graph_last l 8 56 aaatagacgt 273 0.0214357842460772 0.166666666666667 3 18 4 19 NM_010817 refGene chr8 109113003 - 133214 graph_last l 31 117 tattgtttac 274 0.0214357842460772 0.166666666666667 3 18 4 19 NM_054051 refGene chr11 97298827 - 23550 graph_last l 36 77 ttaaaaaaga 275 0.0214357842460772 0.166666666666667 3 18 4 19 NM_144530 refGene chr1 136498115 - 6343 graph_last 18 55 tctgagacag 276 0.0214616861805627 14 14 1 17 1 gccttccaat 277 0.0220385958550286 0.645390070921986 91 141 114 147 aatgacctgg 278 0.0220688227765554 1.49557522123894 169 113 212 118 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 279 0.0223701814621498 3.22222222222222 29 9 36 9 NM_080556 refGene chr14 115266935 + 44547 graph_last 32 98 gtattggcct 280 0.0223852374018215 0.0833333333333333 1 12 1 13 ttgtgtgttt 281 0.0223852374018215 0.0833333333333333 1 12 1 13 tagacgtact 282 0.0225902737621554 0.210526315789474 4 19 5 20 NM_178923 refGene chr16 91561773 - 55890 graph_last 74 327 cttccccggg 283 0.023295716782363 3.375 27 8 34 8 NM_178880 refGene chr16 93083526 + 56030 graph_last l 24 166 gcggccgaca 284 0.0241026684516182 5 20 4 25 4 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 285 0.0243887258996805 0.352941176470588 12 34 15 35 taagggaaat 286 0.0257830633266106 0.388888888888889 14 36 17 38 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 287 0.0267472122134721 0.418604651162791 18 43 23 45 ttttatgttt 288 0.0288353922880566 0.643939393939394 85 132 107 138 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 289 0.0295314160457871 0.52112676056338 37 71 47 74 NM_025739 refGene chr4 116180039 - 96508 graph_last 62 192 gattaaaaca 290 0.0299706241345396 0.321428571428571 9 28 11 29 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 291 0.0302327859997609 0.5 29 58 36 61 gtgtctcaca 292 0.0302518746008331 0.153846153846154 2 13 2 14 NM_016792 refGene chr18 63768936 - 65404 graph_last l 103 198 cagttgtaaa 293 0.0304484319368806 0.272727272727273 6 22 7 23 ttaggcaagt 294 0.0304484319368806 0.272727272727273 6 22 7 23 atgtagtagt 295 0.0324009452281710 0.46 23 50 29 52 NM_016884 refGene chr14 43945073 - 41160 graph_last 4 27 aattcccgtg 296 0.0325103163901654 Inf 10 0 12 0 NM_009408 refGene chr2 161260208 + 81031 graph_last b 6 31 agcggggacc 297 0.0325103163901654 Inf 10 0 12 0 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 298 0.0325103163901654 Inf 10 0 12 0 NM_025638 refGene chr11 86619855 - 22739 graph_last l 10 34 atgcaaacct 299 0.0325103163901654 Inf 10 0 12 0 genomic chr2 116134387 - 0 unique_long l 7 31 caaagatcct 300 0.0325103163901654 Inf 10 0 12 0 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 301 0.0325103163901654 Inf 10 0 12 0 cagcaatctc 302 0.0325103163901654 Inf 10 0 12 0 NM_173363 refGene chr12 107106677 + 31339 graph_last 13 63 cttgacacac 303 0.0325103163901654 Inf 10 0 12 0 AK122419 knownGene chr5 117855920 - 106497 graph_last l 13 35 ggtgactgtt 304 0.0325103163901654 Inf 10 0 12 0 NM_019979 refGene chr14 24510980 + 40008 graph_last l 22 151 tatttagtcc 305 0.0325103163901654 0.25 5 20 6 21 NM_007637 refGene chr15 31931318 + 46012 graph_last l 50 193 tcatagaaac 306 0.0325103163901654 0.32258064516129 10 31 13 32 tccctgactt 307 0.0325103163901654 0.133333333333333 2 15 3 16 NM_008054 refGene chr10 40732120 + 11702 graph_last l 10 56 tgactctgaa 308 0.0325103163901654 Inf 10 0 12 0 NM_019710 refGene chrX 139759704 + 152140 graph_last l 15 68 ttagattgtt 309 0.0325103163901654 0.133333333333333 2 15 3 16 acagggttgg 310 0.0325526270068911 0 0 9 0 9 NM_013657 refGene chr5 15677518 + 100681 graph_last l 8 20 agaatttaat 311 0.0325526270068911 0 0 9 0 9 agagctgtgg 312 0.0325526270068911 5.66666666666667 17 3 21 3 atggcaattt 313 0.0325526270068911 13 13 1 16 1 attgttcact 314 0.0325526270068911 0 0 9 0 9 NM_015753 refGene chr2 45292287 - 74261 graph_last l 13 58 cacgtgcctg 315 0.0325526270068911 13 13 1 16 1 NM_011531 refGene chr1 135390854 - 6259 graph_last l 7 39 ccagggggac 316 0.0325526270068911 13 13 1 16 1 gcagggtggg 317 0.0325526270068911 1.91666666666667 69 36 87 38 ggcccccaca 318 0.0325526270068911 5.66666666666667 17 3 21 3 T25556 all_est chr4 126054615 + 97288 graph_last 0 9 ggctaagtag 319 0.0325526270068911 0 0 9 0 9 ggcttgccag 320 0.0325526270068911 0 0 9 0 9 gtgaatagat 321 0.0325526270068911 0 0 9 0 9 gtggcgcaca 322 0.0325526270068911 5.66666666666667 17 3 21 3 gttattgatg 323 0.0325526270068911 5.66666666666667 17 3 21 3 taaaataaaa 324 0.0325526270068911 0.176470588235294 3 17 4 18 taaattggat 325 0.0325526270068911 0 0 9 0 9 taacaggaaa 326 0.0325526270068911 0 0 9 0 9 taataaacag 327 0.0325526270068911 0 0 9 0 9 genomic chr5 62944198 + 0 unique_long l 7 25 tagtgtgtga 328 0.0325526270068911 0 0 9 0 9 tccggcttgt 329 0.0325526270068911 0.176470588235294 3 17 4 18 NM_175229 refGene chr17 23399125 + 57745 graph_last l 32 111 ttgctggaaa 330 0.0325526270068911 13 13 1 16 1 AI840093 all_est chr7 15829747 + 119220 graph_last l 5 36 ttggtgagtg 331 0.0325526270068911 13 13 1 16 1 NM_153581 refGene chr8 55142237 + 130191 graph_last l 380 809 gagtgctttg 332 0.0327587384606328 0.574712643678161 50 87 63 91 gtggcacacg 333 0.0330006609201755 6 18 3 22 3 NM_010223 refGene chr8 70802228 + 130947 graph_last l 148 335 gggtgcagcc 334 0.0330576065300502 3.57142857142857 25 7 31 7 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 335 0.033764645111847 4.75 19 4 24 4 gtgactcaca 336 0.033764645111847 4.75 19 4 24 4 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 337 0.0342967081884655 4.2 21 5 26 5 ccaacactga 338 0.0344350551657915 3.66666666666667 22 6 28 6 ataatggata 339 0.0345936822638188 2.76923076923077 36 13 45 14 cgggagatgc 340 0.0357001337363906 0.6 60 100 76 104 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 341 0.0358354625261814 0.554054054054054 41 74 51 77 cacaaaataa 342 0.0359436647037369 0.090909090909091 1 11 1 12 ttttctattt 343 0.0359436647037369 0.090909090909091 1 11 1 12 NM_013685 refGene chr18 70038556 + 65838 graph_last l 50 154 gtcagatttt 344 0.0385199117813499 2.9 29 10 37 10 tgaaataaac 345 0.039935791078627 0.544117647058823 37 68 46 71 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 346 0.0420428291297759 7 14 2 18 2 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 347 0.0420428291297759 7 14 2 18 2 NM_009440 refGene chrX 93368218 - 150509 graph_last l 22 55 ctatgtgttg 348 0.0420428291297759 7 14 2 18 2 gcagctcaca 349 0.0420428291297759 7 14 2 18 2 NM_008748 refGene chr7 134139181 - 126141 graph_last l 18 102 gtggaggggc 350 0.0420428291297759 7 14 2 18 2 ttatcactgt 351 0.0427931799746915 0.285714285714286 6 21 7 22 ttatgaaatg 352 0.0437142848700520 0.333333333333333 10 30 13 31 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 353 0.0451515546963024 0.428571428571429 18 42 23 44 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 354 0.0470597167215402 0.32 8 25 10 26 NM_009782 refGene chr1 157842554 - 7363 graph_last l 34 121 ttggtcaggt 355 0.0470597167215402 0.32 8 25 10 26 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 356 0.0474879265308123 0.263157894736842 5 19 6 20 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 357 0.0474879265308123 0.263157894736842 5 19 6 20 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 358 0.0474879265308123 0.166666666666667 2 12 2 13 NM_198165 refGene chr12 108696357 + 31479 graph_last l 43 95 tggacgattt 359 0.0474879265308123 0.166666666666667 2 12 2 13 NM_008973 refGene chr6 36810971 + 111736 graph_last l 17 84 tttcaatctt 360 0.0474879265308123 0.166666666666667 2 12 2 13 NM_029979 refGene chr14 58039927 + 42269 graph_last l 27 94 tttgctgtgt 361 0.0474879265308123 0.263157894736842 5 19 6 20 NM_009829 refGene chr6 129065716 - 117072 graph_last l 2 16 accaaaacgc 362 0.0491201265563989 Inf 9 0 11 0 atctttctgg 363 0.0491201265563989 4 20 5 25 5 NM_008640 refGene chr12 9084302 - 26222 graph_last 25 107 caaccatcat 364 0.0491201265563989 0.1875 3 16 4 17 NM_008138 refGene chr9 110247498 - 141261 graph_last l 20 144 cagagatccc 365 0.0491201265563989 5.33333333333333 16 3 20 3 NM_054102 refGene chr1 154790569 + 7138 graph_last l 48 98 cctaccaata 366 0.0491201265563989 0.222222222222222 4 18 5 19 ctcaataaac 367 0.0491201265563989 0.1875 3 16 4 17 NM_013514 refGene chr14 62156344 - 42537 graph_last l 146 324 ctgggagggg 368 0.0491201265563989 0.222222222222222 4 18 5 19 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 369 0.0491201265563989 0.357142857142857 10 28 12 29 NM_175366 refGene chr7_random 13762587 + 126800 graph_last l 4 18 gaagggccag 370 0.0491201265563989 Inf 9 0 11 0 NM_007920 refGene chr14 71063383 - 43051 graph_second l 5 34 gaggcagccg 371 0.0491201265563989 Inf 9 0 11 0 gccgcagtgg 372 0.0491201265563989 3.5 21 6 27 6 NM_019648 refGene chr10 96268892 - 14982 graph_last 13 63 gcgggcgtgg 373 0.0491201265563989 Inf 9 0 11 0 NM_010331 refGene chr15 77966799 + 48139 graph_last 4 34 ggccccggac 374 0.0491201265563989 Inf 9 0 11 0 NM_016812 refGene chr8 123874102 + 134083 graph_last l 4 30 gggccatcca 375 0.0491201265563989 Inf 9 0 11 0 gtagctcaca 376 0.0491201265563989 4 20 5 25 5 NM_133925 refGene chr6 28962494 - 111090 graph_last l 16 41 gtccgttctc 377 0.0491201265563989 Inf 9 0 11 0 NM_007421 refGene chr12 108213627 - 31438 graph_last 2 76 taaaattgtt 378 0.0491201265563989 0.222222222222222 4 18 5 19 NM_009829 refGene chr6 129075403 - 117072 graph_last b 4 22 tacccgccgt 379 0.0491201265563989 Inf 9 0 11 0 tgaggatgaa 380 0.0491201265563989 0.1875 3 16 4 17 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 381 0.0491201265563989 0.1875 3 16 4 17 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 382 0.0491201265563989 0.1875 3 16 4 17 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 383 0.0503871956118863 2.19047619047619 46 21 58 22 NM_023190 refGene chr14 45734984 - 41307 graph_last l 6 39 acaagggact 384 0.0507353424780773 12 12 1 15 1 NM_009980 refGene chr7 124868336 - 125551 graph_last l 7 35 gctctaccag 385 0.0507353424780773 12 12 1 15 1 NM_182716 refGene chr1 135449108 - 6266 graph_last l 16 67 ggggtctgcc 386 0.0507353424780773 12 12 1 15 1 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 387 0.0511284023737778 2.8 28 10 35 10 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 388 0.0512559290972675 1.66666666666667 95 57 119 60 tgtgaatgat 389 0.0512559290972675 0.432432432432432 16 37 20 39 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 390 0.0512559290972675 0.432432432432432 16 37 20 39 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 391 0.0520437625612345 0.4 14 35 18 37 ttattaaaat 392 0.0556161918713676 0.272727272727273 6 22 8 23 gggaaggcgg 393 0.0565958786082859 1.54794520547945 113 73 142 76 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 394 0.0567180101351136 2.13636363636364 47 22 59 23 genomic chr7 74661426 + 0 unique_long l 5 41 acacactgta 395 0.057314345809321 0 0 8 0 8 attgagaaca 396 0.057314345809321 0 0 8 0 8 caaacaaaac 397 0.057314345809321 0 0 8 0 8 NM_022891 refGene chr11 97361200 - 23558 graph_last 1 25 cacatatggt 398 0.057314345809321 0 0 8 0 8 cagggcgatg 399 0.057314345809321 0 0 8 0 8 NM_198620 refGene chr5 7905112 - 100322 graph_last l 8 23 tatattaaag 400 0.057314345809321 0 0 8 0 8 NM_145518 refGene chr1 64733297 - 3033 graph_last 8 48 ttaaaaacac 401 0.057314345809321 0 0 8 0 8 NM_009308 refGene chr18 31774869 - 63593 graph_last l 13 28 ttgaatacag 402 0.057314345809321 0 0 8 0 8 taaaaaaaaa 403 0.057505438372971 0.595238095238095 50 84 63 88 NM_008297 refGene chr10 59695541 + 12599 graph_last 0 13 gtggaaaatg 404 0.059357140554469 0.090909090909091 1 11 1 11 NM_009270 refGene chr15 60667135 + 47298 graph_last l 22 61 taaatataag 405 0.059357140554469 0.090909090909091 1 11 1 11 NM_198111 refGene chr12 48649939 + 27846 graph_last l 44 78 tagagaggtg 406 0.059357140554469 0.090909090909091 1 11 1 11 NM_153545 refGene chr11 120276827 + 25607 graph_last l 50 74 tcccaggaaa 407 0.059357140554469 0.090909090909091 1 11 1 11 gtttagtgga 408 0.0603291932517193 0.477272727272727 21 44 26 46 tagatcctag 409 0.0606241503058287 0.387096774193548 12 31 15 32 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 410 0.0610227153791721 0.3 6 20 7 21 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 411 0.061186007062116 0.509433962264151 27 53 34 55 ccagtgcctg 412 0.0615174291393348 7 14 2 17 2 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 413 0.0643936316941256 0.489361702127660 23 47 29 49 aggaaggcgg 414 0.064678973754343 1.42105263157895 162 114 204 119 NM_008946 refGene chr11 70098721 + 21147 graph_last b 35 205 gaacgcgacg 415 0.0651256446916019 3.28571428571429 23 7 29 7 agatctatac 416 0.0651354272437036 0.490196078431373 25 51 32 53 atagcatctg 417 0.0694725438244636 0.277777777777778 5 18 6 19 NM_023328 refGene chr13 59233431 - 35436 graph_last l 99 174 tgaactgtgt 418 0.0694725438244636 0.277777777777778 5 18 6 19 NM_053075 refGene chr5 22955215 - 101155 graph_last l 54 151 ttacactact 419 0.0694725438244636 0.277777777777778 5 18 6 19 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 420 0.0694725438244636 0.277777777777778 5 18 6 19 gtggtgcaca 421 0.0696214956844204 5 15 3 19 3 tacaacactc 422 0.0696214956844204 2.7 27 10 34 10 tgggtgctgg 423 0.0696214956844204 5 15 3 19 3 NM_010798 refGene chr10 78003266 - 13706 graph_last 129 474 aacgctgcca 424 0.070083002109316 2.04166666666667 49 24 61 25 tgctgtgaaa 425 0.0701139998470473 0.411764705882353 14 34 18 36 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 426 0.0715235764142648 0.5 26 52 33 54 AK122204 knownGene chr2 92236623 + 76871 graph_last l 43 102 agacaactaa 427 0.0717244884726941 0.304347826086957 7 23 9 24 NM_010487 refGene chr9 22638223 - 135759 graph_last l 47 135 ccccacacac 428 0.0717244884726941 4.5 18 4 22 4 ggacagatgt 429 0.0717244884726941 4.5 18 4 22 4 gcaataaatg 430 0.0721104601603771 0.6796875 87 128 109 134 tctgtaattg 431 0.0736809092169959 0.235294117647059 4 17 5 18 NM_024222 refGene chr9 117615376 - 141880 graph_last l 6 31 agggaaataa 432 0.074073633107967 0.181818181818182 2 11 2 12 NM_020591 refGene chr11 68913687 + 21005 graph_last l 52 114 catctgtggg 433 0.074073633107967 0.181818181818182 2 11 2 12 gaaataaatg 434 0.074073633107967 0.181818181818182 2 11 2 12 NM_028177 refGene chr7 114172041 - 124850 graph_last 56 165 gaagacgaat 435 0.074073633107967 0.181818181818182 2 11 2 12 gaaggaaaaa 436 0.074073633107967 0.181818181818182 2 11 2 12 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 437 0.074073633107967 0.181818181818182 2 11 2 12 NM_133954 refGene chr8 96605505 - 132575 graph_last l 3 36 tgctctagaa 438 0.074073633107967 0.181818181818182 2 11 2 12 ttaattcatt 439 0.074073633107967 0.181818181818182 2 11 2 12 ttccttttgt 440 0.074073633107967 0.181818181818182 2 11 2 12 NM_021345 refGene chr9 67379153 - 138637 graph_last l 60 153 ttctagttgc 441 0.074073633107967 0.2 3 15 4 16 NM_018856 refGene chr4 153937503 + 99814 graph_last l 18 45 tttaatacaa 442 0.074073633107967 0.181818181818182 2 11 2 12 NM_175514 refGene chr2 84249596 + 76272 graph_last l 50 123 ttttggtgta 443 0.074073633107967 0.181818181818182 2 11 2 12 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 444 0.0753467467745195 0.617977528089888 55 89 69 93 NM_134086 refGene chr15 98545598 + 49712 graph_last l 12 40 aaggatatct 445 0.0761113316940684 Inf 8 0 10 0 NM_022423 refGene chr11 58531070 - 20273 graph_second 0 9 aatgtgctcg 446 0.0761113316940684 Inf 8 0 10 0 acagccgtgg 447 0.0761113316940684 Inf 8 0 10 0 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 448 0.0761113316940684 Inf 8 0 10 0 BU522569 all_est chr11 68970314 + 21015 graph_last l 12 33 agagcccggc 449 0.0761113316940684 Inf 8 0 10 0 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 450 0.0761113316940684 11 11 1 14 1 NM_023871 refGene chr2 30346412 - 73215 graph_last 18 64 attcaaatcc 451 0.0761113316940684 11 11 1 14 1 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 452 0.0761113316940684 0.459459459459459 17 37 21 39 NM_199022 refGene chr2 125928783 + 78833 graph_last l 38 101 cattgtggaa 453 0.0761113316940684 11 11 1 14 1 NM_175149 refGene chr8 126434727 - 134358 graph_last l 6 46 cccaggctca 454 0.0761113316940684 Inf 8 0 10 0 NM_010906 refGene chr8 85570306 - 131845 graph_last l 14 48 cgcctctctc 455 0.0761113316940684 11 11 1 14 1 NM_021399 refGene chr12 103477310 - 31002 graph_last l 5 29 ctatggaagg 456 0.0761113316940684 11 11 1 14 1 ctgctgcttc 457 0.0761113316940684 11 11 1 14 1 NM_007990 refGene chr19 6104038 + 67634 graph_last l 18 60 ctgggaggta 458 0.0761113316940684 11 11 1 14 1 gatgaggatg 459 0.0761113316940684 Inf 8 0 10 0 NM_133726 refGene chr15 82825573 + 48651 graph_second l 46 85 gccaagtaag 460 0.0761113316940684 Inf 8 0 10 0 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 461 0.0761113316940684 11 11 1 14 1 gcgacgcggg 462 0.0761113316940684 11 11 1 14 1 gctgtcgtca 463 0.0761113316940684 Inf 8 0 10 0 ggggcacctg 464 0.0761113316940684 Inf 8 0 10 0 NM_139272 refGene chr8 126141377 + 134336 graph_last 3 36 gtggccagtg 465 0.0761113316940684 Inf 8 0 10 0 tacccaggca 466 0.0761113316940684 Inf 8 0 10 0 tccctggcat 467 0.0761113316940684 0.285714285714286 6 21 8 22 atggctcaca 468 0.0783492822797378 3 24 8 30 8 atgtcatcaa 469 0.0783492822797378 3 24 8 30 8 cctacagtcc 470 0.0783492822797378 3 24 8 30 8 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 471 0.0833840617007491 0.571428571428571 36 63 45 66 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 472 0.0873988783502137 0.315789473684211 6 19 7 20 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 473 0.0873988783502137 0.315789473684211 6 19 7 20 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 474 0.0906138371655908 0.48780487804878 20 41 25 43 cagctttgct 475 0.0914668429944983 6.5 13 2 16 2 gccttggtga 476 0.0914668429944983 6.5 13 2 16 2 aaggggggca 477 0.0929302932944917 3.33333333333333 20 6 25 6 NM_013540 refGene chr3 82522444 - 86190 graph_last l 43 155 tgtactatgt 478 0.0940202793290772 0.379310344827586 11 29 14 30 ttcttgactt 479 0.0940202793290772 0.379310344827586 11 29 14 30 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 480 0.0945990749731542 0.527272727272727 29 55 37 57 NM_026648 refGene chr8 121477835 - 133909 graph_last l 16 42 agcagatggt 481 0.0972945176384824 0.1 1 10 1 10 NM_026213 refGene chr15 5250696 - 45004 graph_last l 21 53 cagatgtatg 482 0.0972945176384824 0.1 1 10 1 10 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 483 0.0972945176384824 0.1 1 10 1 10 NM_172952 refGene chr12 74619208 + 29224 graph_last l 27 82 tggaaatcaa 484 0.0972945176384824 0.1 1 10 1 10 NM_177906 refGene chr9 29592164 + 136011 graph_last l 29 65 ttacattgta 485 0.0972945176384824 0.1 1 10 1 10 NM_011801 refGene chr8 113461104 - 133515 graph_last l 25 71 tttccagcaa 486 0.0972945176384824 0.1 1 10 1 10 gccaagtgga 487 0.0979419542092818 1.32727272727273 219 165 275 172 NM_133831 refGene chr7 12959477 + 118963 graph_last l 20 94 aggcaggccg 488 0.0982410533479206 4.66666666666667 14 3 18 3 cagcatcacc 489 0.0982410533479206 0.666666666666667 72 108 90 113 cctttaatct 490 0.0982410533479206 4.66666666666667 14 3 18 3 NM_009441 refGene chr16 96222366 + 56249 graph_last l 65 151 tgagaactgc 491 0.0982410533479206 4.66666666666667 14 3 18 3 BY534359 all_est chrX 84532804 + 150025 graph_last 0 72 tgagagaaaa 492 0.0982410533479206 0.318181818181818 7 22 9 23 NM_145979 refGene chr6 127056993 + 116948 graph_last l 54 136 tgcaggagct 493 0.0982410533479206 4.66666666666667 14 3 18 3 NM_025407 refGene chr9 111570399 + 141448 graph_last l 67 280 ttctggctgc 494 0.0982410533479206 4.66666666666667 14 3 18 3 atttgattag 495 0.09834574029497 0.472222222222222 17 36 21 38 taaaagttgt 496 0.0984253749998736 0.294117647058824 5 17 6 18 taaatgtcct 497 0.0984253749998736 0.294117647058824 5 17 6 18 NM_013896 refGene chr12 67019406 - 28702 graph_last l 21 91 tatgagatag 498 0.0984253749998736 0.294117647058824 5 17 6 18 tttatataaa 499 0.0984253749998736 0.294117647058824 5 17 6 18 NM_010771 refGene chr18 35750143 + 63875 graph_second l 11 76 tttggatgtt 500 0.0984253749998736 0.294117647058824 5 17 6 18 actataacca 501 0.0988590982867818 0 0 7 0 7 NM_181734 refGene chr2 164232953 + 81207 graph_last l 2 37 actgggtctc 502 0.0988590982867818 0 0 7 0 7 NM_026046 refGene chr7 10398993 + 118867 graph_last l 7 17 agtcacacac 503 0.0988590982867818 0 0 7 0 7 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 504 0.0988590982867818 2.46153846153846 32 13 40 14 NM_028870 refGene chr13 54375564 - 35055 graph_last l 26 55 cagagagaga 505 0.0988590982867818 0 0 7 0 7 cgagagatcg 506 0.0988590982867818 0 0 7 0 7 NM_133722 refGene chr7 76353840 + 122669 graph_last l 3 27 cgtcctttat 507 0.0988590982867818 0 0 7 0 7 genomic chr18 66302496 + 0 unique_long l 2 11 gatgtaatac 508 0.0988590982867818 0 0 7 0 7 gcaacaacac 509 0.0988590982867818 0 0 7 0 7 gctcctgagg 510 0.0988590982867818 0 0 7 0 7 taaataaagg 511 0.0988590982867818 0 0 7 0 7 NM_175552 refGene chr3 103169091 - 87686 graph_last l 6 20 taaggtcata 512 0.0988590982867818 0 0 7 0 7 tacatatata 513 0.0988590982867818 0 0 7 0 7 NM_152804 refGene chr13 109184589 + 38028 graph_last l 10 45 ttagagaagt 514 0.0988590982867818 0 0 7 0 7 aacaatttgg 515 0.102387219763334 0.747422680412371 145 194 182 203 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 516 0.103715535751041 0.25 4 16 5 17 tacttgtgtt 517 0.104683446140026 0.370370370370370 10 27 13 28 ctgtaggtga 518 0.106937029160436 0.70945945945946 105 148 132 154 NM_029810 refGene chr19 47023591 + 70244 graph_last l 43 140 tagtggcgta 519 0.107483343803963 2.875 23 8 29 8 NM_009295 refGene chr2 33060457 - 73476 graph_last l 126 428 tggggtttcc 520 0.107483343803963 0.413793103448276 12 29 15 30 aaaagaaata 521 0.108073061671819 0.214285714285714 3 14 4 15 AA655495 all_est chr15 79783783 + 48321 graph_last l 53 168 aaataaagct 522 0.108073061671819 0.3 6 20 8 21 ccatattatg 523 0.108073061671819 0.3 6 20 8 21 NM_023526 refGene chr14 13638419 - 39306 graph_last 11 60 tagttaatgt 524 0.108073061671819 0.214285714285714 3 14 4 15 NM_025548 refGene chr7 24142854 - 119914 graph_last 20 67 tatgtaggac 525 0.108073061671819 0.214285714285714 3 14 4 15 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 526 0.108073061671819 0.214285714285714 3 14 4 15 NM_133697 refGene chr5 64944338 + 103345 graph_last 0 62 attgattaat 527 0.113101210620192 0.166666666666667 2 12 3 13 AK018295 knownGene chr18_random 3638804 + 66832 graph_last l 12 59 gaaacactat 528 0.113101210620192 0.166666666666667 2 12 3 13 gaacatattt 529 0.113101210620192 0.166666666666667 2 12 3 13 AF053980 knownGene chr11 7076056 + 17536 graph_last l 41 119 gacaaagggg 530 0.113101210620192 0.166666666666667 2 12 3 13 tcaataaaaa 531 0.113101210620192 0.166666666666667 2 12 3 13 NM_025816 refGene chr6 53234427 + 112812 graph_last l 22 165 accactgata 532 0.115678895359299 0.433333333333333 13 30 16 31 agatccagct 533 0.115678895359299 Inf 7 0 9 0 NM_025482 refGene chr2 181399879 + 82485 graph_last l 38 91 caagctcatc 534 0.115678895359299 Inf 7 0 9 0 NM_010583 refGene chr11 45991197 + 19428 graph_second 0 9 cacgacctga 535 0.115678895359299 Inf 7 0 9 0 NM_178576 refGene chr5 144183355 - 108464 graph_last l 5 26 cagaggccgc 536 0.115678895359299 Inf 7 0 9 0 L31652 knownGene chrX 90352430 + 150261 graph_last l 7 33 ccagaaggcc 537 0.115678895359299 Inf 7 0 9 0 genomic chr5 92466331 - 0 unique_long l 31 107 cccactgagt 538 0.115678895359299 Inf 7 0 9 0 NM_011029 refGene chr9 122505801 + 142160 graph_last 2 12 cgaggtacta 539 0.115678895359299 Inf 7 0 9 0 NM_025594 refGene chr18 36913799 + 64022 graph_last b 22 52 cgcgtggaac 540 0.115678895359299 Inf 7 0 9 0 NM_021554 refGene chr7 113129493 + 124785 graph_last l 60 191 ctaataaacg 541 0.115678895359299 0.433333333333333 13 30 16 31 ctactgacat 542 0.115678895359299 Inf 7 0 9 0 BC003217 knownGene chr17 62607777 - 60440 graph_last 28 64 ctgaaaaagt 543 0.115678895359299 0.181818181818182 2 11 2 11 NM_011492 refGene chr10 82454712 + 14048 graph_last 5 16 ctggacctgg 544 0.115678895359299 Inf 7 0 9 0 NM_029231 refGene chr11 69964265 - 21136 graph_last 1 18 ctggctgatt 545 0.115678895359299 Inf 7 0 9 0 NM_021448 refGene chr18 25268369 + 63413 graph_last l 49 141 ctgtcaaaga 546 0.115678895359299 0.4 10 25 12 26 gagctggtga 547 0.115678895359299 10 10 1 13 1 gaggagaaga 548 0.115678895359299 0.615384615384615 48 78 60 81 NM_022022 refGene chr4 147441721 - 99270 graph_last l 7 23 gcccgacaac 549 0.115678895359299 Inf 7 0 9 0 AA139939 all_est chr3 90376105 - 86642 graph_last 0 39 gcgggggtgc 550 0.115678895359299 10 10 1 13 1 NM_017477 refGene chr6 89361129 + 114740 graph_last l 11 24 gctaccgtga 551 0.115678895359299 Inf 7 0 9 0 gcttccaatc 552 0.115678895359299 Inf 7 0 9 0 AK129231 knownGene chr14 94761651 + 43740 graph_last l 13 42 gcttgtatac 553 0.115678895359299 0.181818181818182 2 11 2 11 ggaaggatag 554 0.115678895359299 10 10 1 13 1 AK044675 knownGene chr18 8346551 - 62672 graph_last l 15 42 ggacatctca 555 0.115678895359299 Inf 7 0 9 0 ggagagctgt 556 0.115678895359299 Inf 7 0 9 0 gggattggtg 557 0.115678895359299 Inf 7 0 9 0 AK017507 knownGene chr4 21817716 + 91710 graph_last l 11 45 gggctgcttt 558 0.115678895359299 Inf 7 0 9 0 gtggctcact 559 0.115678895359299 Inf 7 0 9 0 tacacggagc 560 0.115678895359299 10 10 1 13 1 tagacaaagg 561 0.115678895359299 0.181818181818182 2 11 2 11 NM_145393 refGene chr4 130860643 - 97687 graph_last 13 40 tagtgaatgt 562 0.115678895359299 0.181818181818182 2 11 2 11 tccggggacg 563 0.115678895359299 10 10 1 13 1 tcctacagtg 564 0.115678895359299 Inf 7 0 9 0 NM_178662 refGene chr10 83577273 - 14180 graph_last l 10 33 tctgcccgag 565 0.115678895359299 Inf 7 0 9 0 NM_173364 refGene chr9 125235525 - 142346 graph_last l 10 39 tgccagtgac 566 0.115678895359299 Inf 7 0 9 0 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 567 0.115678895359299 0.4 10 25 12 26 tggtggaatg 568 0.115678895359299 10 10 1 13 1 NM_025422 refGene chr2 60528693 + 74971 graph_last 0 22 tggtggctgg 569 0.115678895359299 Inf 7 0 9 0 NM_008737 refGene chr8 130397400 + 134614 graph_last 1 20 tgttcatact 570 0.115678895359299 Inf 7 0 9 0 NM_024212 refGene chr9 66553110 - 138568 graph_last 4 39 tttgatttat 571 0.115678895359299 0.181818181818182 2 11 2 11 tttgctcttt 572 0.115678895359299 0.181818181818182 2 11 2 11 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 573 0.116902688649402 1.61224489795918 79 49 99 51 NM_018748 refGene chr9 120963196 + 142048 graph_last l 42 101 tcatctcaga 574 0.117548206967310 0.333333333333333 6 18 7 19 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 575 0.117548206967310 0.333333333333333 6 18 7 19 tgtataaaat 576 0.117548206967310 0.333333333333333 6 18 7 19 NM_175015 refGene chr2 74302832 - 75802 graph_last 354 852 gaaatatatg 577 0.118656998754891 0.549019607843137 28 51 35 53 NM_009338 refGene chr17 13166853 - 57147 graph_last l 38 141 ggaaaccacg 578 0.118656998754891 3.16666666666667 19 6 24 6 NM_013608 refGene chr10 131323738 + 16744 graph_last l 94 328 tcgcaagcaa 579 0.120098770457324 2.10526315789474 40 19 50 20 NM_007933 refGene chr11 70223267 - 21160 graph_last l 58 307 ggctgggggc 580 0.124225728783668 1.91666666666667 46 24 58 25 NM_011650 refGene chr1 120849495 - 5532 graph_last l 16 72 agcattggcg 581 0.127546223413977 3.6 18 5 22 5 NM_178242 refGene chr5 141719479 + 108235 graph_last 1 19 agcctggcgg 582 0.127546223413977 6 12 2 15 2 NM_178252 refGene chr7 24426999 - 119943 graph_last l 11 49 cctcccgaca 583 0.127546223413977 6 12 2 15 2 gcggcgccgc 584 0.127546223413977 6 12 2 15 2 tgtgttgaga 585 0.127546223413977 3.6 18 5 22 5 NM_134044 refGene chr12 83501553 + 30013 graph_last 0 49 ttagatattc 586 0.127546223413977 6 12 2 15 2 NM_009169 refGene chr6 6285073 - 110133 graph_last 73 165 tttatttcat 587 0.129269400530057 0.333333333333333 7 21 9 22 caaaactgta 588 0.135010633908796 4.66666666666667 14 3 17 3 tctttaatcc 589 0.135010633908796 4.66666666666667 14 3 17 3 NM_018774 refGene chr4 127665884 + 97362 graph_last l 13 55 tggccaagcc 590 0.135010633908796 4.66666666666667 14 3 17 3 NM_133916 refGene chr5 139141607 + 108083 graph_last 20 86 gggtttccag 591 0.137294508948024 3.75 15 4 19 4 tgtgaagtag 592 0.137294508948024 0.384615384615385 10 26 13 27 agaccctgtc 593 0.137510732467325 4 16 4 20 4 NM_011492 refGene chr10 82439824 + 14048 graph_last l 15 81 ccgccctgcg 594 0.137510732467325 4 16 4 20 4 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 595 0.140434261210195 0.511627906976744 22 43 28 45 ctcgagtctc 596 0.141298572681979 2.1875 35 16 44 17 NM_018858 refGene chr5 116315654 + 106380 graph_last l 120 447 ctcttccccc 597 0.143986148647779 1.95652173913043 45 23 56 24 atagacgcaa 598 0.146277091275477 0.555555555555556 30 54 38 56 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 599 0.147074224432513 0.616438356164384 45 73 57 76 NM_013897 refGene chr9 52641811 + 137562 graph_last l 39 114 gaactatgtt 600 0.148477443964232 0.266666666666667 4 15 5 16 NM_178703 refGene chr6 116077681 + 116195 graph_last l 76 354 tacgtttcta 601 0.148477443964232 0.266666666666667 4 15 5 16 NM_016748 refGene chr4 119645311 - 96782 graph_last l 22 79 tgcctacagt 602 0.148477443964232 0.266666666666667 4 15 5 16 NM_009466 refGene chr5 64716776 - 103290 graph_last 0 52 tgtagactgg 603 0.148477443964232 0.266666666666667 4 15 5 16 NM_007839 refGene chr5 51468944 + 102762 graph_last l 27 99 atcgttgtaa 604 0.149208481627223 0.315789473684211 6 19 8 20 NM_021278 refGene chrX 155230346 + 152783 graph_last l 30 91 caagttcttt 605 0.149208481627223 0.315789473684211 6 19 8 20 NM_007597 refGene chr11 49920151 - 19666 graph_last l 49 306 taacagttgt 606 0.149208481627223 0.4375 14 32 18 33 NM_178060 refGene chr11 98352551 + 23676 graph_last l 413 1055 tctgtagccc 607 0.149208481627223 0.708661417322835 90 127 113 133 atgacaatag 608 0.149660648180232 0.111111111111111 1 9 1 9 atttttatac 609 0.149660648180232 0.111111111111111 1 9 1 9 NM_175255 refGene chr11 51317474 - 19792 graph_last l 12 36 caaacaatgt 610 0.149660648180232 0.111111111111111 1 9 1 9 NM_080288 refGene chr13 20448883 + 33067 graph_last l 11 94 ctgtggaata 611 0.149660648180232 0.111111111111111 1 9 1 9 gagcgttttg 612 0.149660648180232 1.33834586466165 178 133 224 139 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 613 0.149660648180232 0.578947368421053 33 57 42 60 NM_172806 refGene chr12 98337646 - 30760 graph_last l 7 23 taacactgac 614 0.149660648180232 0.111111111111111 1 9 1 9 NM_153140 refGene chr17 25582781 - 57952 graph_last l 10 27 tagagtaggt 615 0.149660648180232 0.111111111111111 1 9 1 9 ttaatatacc 616 0.149660648180232 0.111111111111111 1 9 1 9 ttctttctaa 617 0.149660648180232 0.111111111111111 1 9 1 9 NM_011969 refGene chr2 179848177 - 82346 graph_last l 53 162 aggcgggatc 618 0.149906893716961 2.5 25 10 31 10 tacattttca 619 0.149906893716961 0.525 21 40 26 42 ggggtggggg 620 0.153479953890142 2.85714285714286 20 7 25 7 NM_145385 refGene chr6 126864632 + 116927 graph_last l 150 428 gtcctataag 621 0.155237928320097 0.448275862068966 13 29 16 30 NM_133964 refGene chr10 83760581 + 14204 graph_last l 17 74 aataaaataa 622 0.155653102809621 0.230769230769231 3 13 4 14 NM_010160 refGene chr2 6465097 - 71738 graph_last l 17 51 acatttattg 623 0.155653102809621 0.230769230769231 3 13 4 14 atgcagactt 624 0.155653102809621 0.5 17 34 21 36 ctctatttaa 625 0.155653102809621 0.230769230769231 3 13 4 14 gaacttaaag 626 0.155653102809621 0.230769230769231 3 13 4 14 NM_177616 refGene chr11 4039068 + 17252 graph_last l 3 33 gaatctattt 627 0.155653102809621 0.230769230769231 3 13 4 14 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 628 0.155653102809621 0.586206896551724 34 58 43 61 NM_008853 refGene chrX 89302940 - 150228 graph_last l 34 113 ggttaatgtt 629 0.155653102809621 0.230769230769231 3 13 4 14 taaaaaataa 630 0.155653102809621 0.230769230769231 3 13 4 14 NM_011499 refGene chr6 139194420 + 117702 graph_last l 29 73 tatcaagatt 631 0.155653102809621 0.230769230769231 3 13 4 14 tgagcccaca 632 0.155653102809621 0.230769230769231 3 13 4 14 ctgtaaatgt 633 0.155874223208828 0.363636363636364 8 22 10 23 gtgagcttgt 634 0.155874223208828 0.363636363636364 8 22 10 23 NM_025936 refGene chr11 35449596 - 18948 graph_last l 26 105 tgcacacaag 635 0.155874223208828 0.363636363636364 8 22 10 23 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 636 0.157293726646855 0.416666666666667 10 24 12 25 NM_153555 refGene chr1 176054753 - 8542 graph_last l 149 466 ggagcaggag 637 0.157701777433417 2.2 33 15 42 16 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 638 0.157780884794503 0.541666666666667 26 48 33 50 NM_177176 refGene chr4 97166772 + 95245 graph_last 2 17 aaaaaagaaa 639 0.159356342250687 0 0 6 0 6 genomic chr3 82522449 + 0 unique_long l 18 26 aaaaattgga 640 0.159356342250687 0 0 6 0 6 NM_133352 refGene chr19 41277237 - 69785 graph_last 18 66 aaacattggg 641 0.159356342250687 0.181818181818182 2 11 3 12 NM_172153 refGene chr5 44977508 + 102456 graph_last 0 25 aaagactgaa 642 0.159356342250687 0 0 6 0 6 aaatatattt 643 0.159356342250687 0 0 6 0 6 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 644 0.159356342250687 0.352941176470588 6 17 7 18 NM_026254 refGene chr16 57620578 - 54476 graph_last l 9 25 aaattgcacc 645 0.159356342250687 0 0 6 0 6 NM_019796 refGene chr9 91409335 - 140127 graph_last 0 27 aagaattaaa 646 0.159356342250687 0 0 6 0 6 acacgtctat 647 0.159356342250687 0 0 6 0 6 NM_029456 refGene chr19 3259537 - 67295 graph_last b 8 32 acatcgcgta 648 0.159356342250687 9 9 1 11 1 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 649 0.159356342250687 0.352941176470588 6 17 7 18 AK012553 knownGene chr2 107145879 + 77702 graph_last 8 28 accgacggtt 650 0.159356342250687 9 9 1 11 1 NM_175930 refGene chr12 113767444 + 31667 graph_last 3 26 actctgctgt 651 0.159356342250687 0 0 6 0 6 NM_172666 refGene chr2 76323924 + 75908 graph_last 1 24 agcctatgat 652 0.159356342250687 0 0 6 0 6 agcttgatta 653 0.159356342250687 0 0 6 0 6 agggacctcc 654 0.159356342250687 0 0 6 0 6 NM_026499 refGene chr2 163549271 + 81143 graph_last l 12 46 agtgtgaaac 655 0.159356342250687 0.181818181818182 2 11 3 12 atagaggcaa 656 0.159356342250687 0.533333333333333 24 45 30 47 atgaaataaa 657 0.159356342250687 0 0 6 0 6 AA718154 all_est chr14 70143955 - 42966 graph_last l 21 46 atgatgagag 658 0.159356342250687 0 0 6 0 6 atgtctcaag 659 0.159356342250687 0 0 6 0 6 NM_009933 refGene chr10 78852173 - 13762 graph_last 0 26 attaaaaata 660 0.159356342250687 0 0 6 0 6 caaagaaaaa 661 0.159356342250687 0 0 6 0 6 caaatgttaa 662 0.159356342250687 0 0 6 0 6 NM_008883 refGene chrX 63947137 - 149251 graph_second 0 7 caacagaagg 663 0.159356342250687 0 0 6 0 6 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 664 0.159356342250687 0 0 6 0 6 AV369886 all_est chr13 41688354 + 34275 graph_last 11 36 cacttatata 665 0.159356342250687 0 0 6 0 6 genomic chr4 129240676 - 0 unique_long l 22 104 cagccaggtg 666 0.159356342250687 9 9 1 11 1 NM_010327 refGene chr16 18227773 - 52048 graph_last l 6 31 caggagatgt 667 0.159356342250687 9 9 1 11 1 catctagagg 668 0.159356342250687 0 0 6 0 6 ccaagaatct 669 0.159356342250687 9 9 1 11 1 ccacctgcac 670 0.159356342250687 0 0 6 0 6 cgctaccaaa 671 0.159356342250687 0 0 6 0 6 NM_172755 refGene chr8 70418108 - 130912 graph_last l 23 73 ctagctaaat 672 0.159356342250687 0.352941176470588 6 17 7 18 NM_011283 refGene chr1 4359714 + 62 graph_last 0 7 cttattcttc 673 0.159356342250687 0 0 6 0 6 S74567 knownGene chr8 117404042 - 133731 graph_last l 7 15 cttctctttc 674 0.159356342250687 0 0 6 0 6 gaaaaataac 675 0.159356342250687 0 0 6 0 6 NM_031842 refGene chr15 101661502 + 49950 graph_last l 28 76 gaccaaaatt 676 0.159356342250687 9 9 1 11 1 NM_176947 refGene chr12 60629241 - 28364 graph_last l 16 58 gaccgtggag 677 0.159356342250687 9 9 1 11 1 gacgctgcca 678 0.159356342250687 0 0 6 0 6 AU067644 all_est chr2 104406186 - 77512 graph_last l 23 42 gagttgctgt 679 0.159356342250687 0 0 6 0 6 NM_025879 refGene chr13 102633148 + 37637 graph_last l 94 162 gcaataaata 680 0.159356342250687 0.181818181818182 2 11 3 12 gccagccagg 681 0.159356342250687 9 9 1 11 1 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 682 0.159356342250687 3 18 6 23 6 gcttctttta 683 0.159356342250687 0 0 6 0 6 NM_172289 refGene chr9 15930739 + 135384 graph_last l 2 30 ggagaagagc 684 0.159356342250687 0 0 6 0 6 ggagcgtggc 685 0.159356342250687 0 0 6 0 6 ggatggggag 686 0.159356342250687 0.692307692307692 72 104 90 109 NM_010110 refGene chrX 88985124 + 150221 graph_second 0 13 gggggtggag 687 0.159356342250687 9 9 1 11 1 ggttaaatgt 688 0.159356342250687 0 0 6 0 6 AK015640 knownGene chr14 40941724 + 40993 graph_last l 4 16 gtaacaagta 689 0.159356342250687 0 0 6 0 6 NM_019796 refGene chr9 91414916 - 140127 graph_last 0 14 gtatcttaat 690 0.159356342250687 0 0 6 0 6 genomic chr6 89403818 - 0 unique_short s 3 19 gttcgaccag 691 0.159356342250687 9 9 1 11 1 NM_019802 refGene chr6 73476352 - 113867 graph_second 1 8 gtttcagcac 692 0.159356342250687 0 0 6 0 6 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 693 0.159356342250687 0.181818181818182 2 11 3 12 taaaatttgt 694 0.159356342250687 0.352941176470588 6 17 7 18 taatatataa 695 0.159356342250687 0 0 6 0 6 NM_023403 refGene chr7_random 38721378 + 127300 graph_last l 23 55 tacacgtacc 696 0.159356342250687 0 0 6 0 6 NM_025569 refGene chr1 171092134 - 8228 graph_last l 33 89 tacagcacag 697 0.159356342250687 9 9 1 11 1 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 698 0.159356342250687 9 9 1 11 1 NM_019491 refGene chr13 17712207 - 32922 graph_last 22 61 tacgacgagt 699 0.159356342250687 9 9 1 11 1 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 700 0.159356342250687 9 9 1 11 1 NM_033270 refGene chr12 17220525 + 26472 graph_last l 25 52 tatacaaagt 701 0.159356342250687 0 0 6 0 6 NM_007458 refGene chr7 37839274 - 120756 graph_second l 21 44 tatctcttct 702 0.159356342250687 0 0 6 0 6 NM_198118 refGene chr6 54766185 + 112914 graph_last l 29 46 tattaaatac 703 0.159356342250687 0 0 6 0 6 tcaatttgaa 704 0.159356342250687 0 0 6 0 6 NM_152915 refGene chr1 86195373 + 4126 graph_second l 12 36 tcactacctc 705 0.159356342250687 0 0 6 0 6 tcagacgcgg 706 0.159356342250687 9 9 1 11 1 tccctgtagt 707 0.159356342250687 0 0 6 0 6 tcctcacggg 708 0.159356342250687 0.352941176470588 6 17 7 18 genomic chr10 82467785 - 0 unique_long l 4 27 tctcattttc 709 0.159356342250687 9 9 1 11 1 tctctagctg 710 0.159356342250687 9 9 1 11 1 NM_026993 refGene chr3 149807578 + 90163 graph_last l 29 79 tcttgctgca 711 0.159356342250687 9 9 1 11 1 NM_138594 refGene chr6 128910271 + 117058 graph_last l 11 30 tgaaaatgtt 712 0.159356342250687 0 0 6 0 6 NM_198942 refGene chr17 80944018 - 61440 graph_last l 6 44 tgagtaagaa 713 0.159356342250687 0.352941176470588 6 17 7 18 tggaacgata 714 0.159356342250687 0 0 6 0 6 tggcaaggat 715 0.159356342250687 0 0 6 0 6 NM_175101 refGene chr6 115274651 - 116145 graph_last 31 82 ttaagcactg 716 0.159356342250687 0.181818181818182 2 11 3 12 NM_029653 refGene chr13 60545975 + 35479 graph_last l 9 16 ttaccatatc 717 0.159356342250687 0 0 6 0 6 ttcaatttca 718 0.159356342250687 0 0 6 0 6 genomic chr17 26602950 + 0 unique_long l 61 112 tttaataaac 719 0.159356342250687 0.181818181818182 2 11 3 12 tttgacagta 720 0.159356342250687 0 0 6 0 6 NM_007668 refGene chr5 22576974 - 101122 graph_last l 4 45 accaagctgc 721 0.160557712633638 10 10 1 12 1 NM_019827 refGene chr16 38048116 + 53446 graph_last l 18 74 ctcggattca 722 0.160557712633638 10 10 1 12 1 gaggcttata 723 0.160557712633638 10 10 1 12 1 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 724 0.161902473622590 3.4 17 5 21 5 NM_010206 refGene chr8 24418477 + 128679 graph_last l 28 117 ggggagacgc 725 0.161902473622590 3.4 17 5 21 5 taggaggtaa 726 0.161902473622590 3.4 17 5 21 5 AF008649 knownGene chr17 36825307 + 59106 graph_last l 173 341 gacagatgga 727 0.162027127130116 0.35 7 20 9 21 NM_022319 refGene chr9 99839060 - 140594 graph_last l 35 99 ttggtggtca 728 0.162027127130116 0.35 7 20 9 21 NM_010238 refGene chr17 33754051 - 58821 graph_last l 10 48 aacaactggc 729 0.162233281962132 Inf 6 0 8 0 aacatacaag 730 0.162233281962132 Inf 6 0 8 0 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 731 0.162233281962132 0.4 10 25 13 26 NM_183154 refGene chr12 79621565 + 29644 graph_last l 24 43 accttcagat 732 0.162233281962132 Inf 6 0 8 0 NM_011670 refGene chr5_random 2617542 - 109059 graph_second l 9 21 actccgtggc 733 0.162233281962132 Inf 6 0 8 0 NM_172683 refGene chr3 97581879 + 87240 graph_last l 4 18 agaactttgc 734 0.162233281962132 Inf 6 0 8 0 AK078964 knownGene chr18 69900496 + 65810 graph_second 0 45 agcaaatcca 735 0.162233281962132 Inf 6 0 8 0 NM_026002 refGene chr15 34549312 + 46126 graph_last l 13 44 agcactagtg 736 0.162233281962132 Inf 6 0 8 0 NM_017392 refGene chr3 111532090 - 88311 graph_second 0 12 agcatcaagg 737 0.162233281962132 Inf 6 0 8 0 AK051233 all_mrna chr14 16044346 + 39487 graph_last 0 26 aggcagaggc 738 0.162233281962132 Inf 6 0 8 0 NM_009156 refGene chr7 12915304 - 118959 graph_second l 8 17 agttccccgg 739 0.162233281962132 Inf 6 0 8 0 atctcgagag 740 0.162233281962132 Inf 6 0 8 0 atgtgtgcaa 741 0.162233281962132 Inf 6 0 8 0 BC044772 knownGene chr12 19450791 + 26628 graph_last l 10 26 cagccaccca 742 0.162233281962132 Inf 6 0 8 0 cctgcaggtc 743 0.162233281962132 Inf 6 0 8 0 cggcagacag 744 0.162233281962132 Inf 6 0 8 0 NM_175407 refGene chr10 44614990 - 12030 graph_last l 4 21 ctcagcgctg 745 0.162233281962132 Inf 6 0 8 0 genomic chr11 30013082 - 0 unique_long l 19 65 ctctggatgg 746 0.162233281962132 Inf 6 0 8 0 NM_021606 refGene chr2 38890209 + 73914 graph_last l 4 34 gactatgcga 747 0.162233281962132 Inf 6 0 8 0 genomic chr5 134663519 + 0 unique_long l 3 16 gagttgcagg 748 0.162233281962132 Inf 6 0 8 0 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 749 0.162233281962132 Inf 6 0 8 0 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 750 0.162233281962132 0.428571428571429 12 28 15 29 NM_007551 refGene chr9 46277330 + 137099 graph_last l 6 26 gccaatctac 751 0.162233281962132 Inf 6 0 8 0 AK129143 knownGene chr18 78789794 - 66286 graph_last 1 14 gctcgggagg 752 0.162233281962132 Inf 6 0 8 0 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 753 0.162233281962132 0.470588235294118 16 34 20 35 NM_008842 refGene chr17 29127747 + 58363 graph_second 3 13 gtagcctgca 754 0.162233281962132 Inf 6 0 8 0 NM_010025 refGene chrX 132126626 - 151844 graph_last l 2 15 gtcagcaagc 755 0.162233281962132 Inf 6 0 8 0 NM_008947 refGene chr12 95672134 + 30593 graph_last 10 50 gtcctggggg 756 0.162233281962132 Inf 6 0 8 0 NM_011512 refGene chr2 27174856 - 72967 graph_last l 6 26 gtggtggccc 757 0.162233281962132 Inf 6 0 8 0 NM_008448 refGene chr18 6415243 - 62563 graph_last 31 83 gttaattttg 758 0.162233281962132 Inf 6 0 8 0 NM_021881 refGene chr17 9967167 - 56956 graph_last l 4 22 taatgaaatt 759 0.162233281962132 Inf 6 0 8 0 NM_175294 refGene chr1 134802952 + 6197 graph_last 10 47 tctcggcctg 760 0.162233281962132 Inf 6 0 8 0 NM_144530 refGene chr1 136503213 - 6343 graph_last 6 26 tgaagacact 761 0.162233281962132 Inf 6 0 8 0 NM_025441 refGene chr12 65200196 - 28531 graph_last l 9 30 tgagtcaggg 762 0.162233281962132 Inf 6 0 8 0 tgcccaggga 763 0.162233281962132 Inf 6 0 8 0 tggcctccct 764 0.162233281962132 Inf 6 0 8 0 genomic chr1 125486993 - 0 unique_short s 0 24 tggcgaaaaa 765 0.162233281962132 Inf 6 0 8 0 BC043094 knownGene chr8 122376278 + 133986 graph_last l 3 14 tggctgaggg 766 0.162233281962132 Inf 6 0 8 0 tgggaaatcg 767 0.162233281962132 Inf 6 0 8 0 riB430101E24 rikenClones chr1 4572654 - 70 graph_last 14 28 tggtttttgt 768 0.162233281962132 Inf 6 0 8 0 NM_172262 refGene chr13 47160716 - 34624 graph_last l 5 19 ttaaagagca 769 0.162233281962132 Inf 6 0 8 0 NM_010124 refGene chr10 63316302 - 12862 graph_last l 2 20 ttagtatctg 770 0.162233281962132 Inf 6 0 8 0 NM_012024 refGene chr12 71378734 - 28957 graph_last l 5 32 ttctccagcc 771 0.162233281962132 Inf 6 0 8 0 agagcagaga 772 0.162933610542916 5.5 11 2 14 2 NM_175251 refGene chr15 98368120 + 49697 graph_last l 4 37 atgctgagag 773 0.162933610542916 5.5 11 2 14 2 NM_016876 refGene chr9 21445046 - 135590 graph_last 32 95 cagccaaacc 774 0.162933610542916 5.5 11 2 14 2 cccaggctga 775 0.162933610542916 2.625 21 8 27 8 NM_026003 refGene chr19 26363863 + 68879 graph_last l 33 89 cgtgcagaca 776 0.162933610542916 5.5 11 2 14 2 gactgcccct 777 0.162933610542916 5.5 11 2 14 2 AF172088 knownGene chr7 110055240 - 124600 graph_last l 23 121 ggatcattct 778 0.162933610542916 5.5 11 2 14 2 NM_012010 refGene chrX 83927636 + 149980 graph_last 14 45 ttccaataca 779 0.162933610542916 5.5 11 2 14 2 NM_177589 refGene chr9 123344210 + 142205 graph_last l 53 134 tttttgaaca 780 0.162933610542916 2.625 21 8 27 8 aggcctggct 781 0.164237674994337 3.5 14 4 18 4 NM_009768 refGene chr10 82599398 + 14067 graph_last 103 233 gggagctgtg 782 0.164237674994337 3.5 14 4 18 4 AK010485 knownGene chr15_random 13961085 + 50719 graph_last 1 27 aattctctgt 783 0.165148716259990 4.33333333333333 13 3 16 3 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 784 0.165148716259990 1.52830188679245 81 53 102 55 ccattttctg 785 0.165148716259990 4.33333333333333 13 3 16 3 ggcgcggacc 786 0.165148716259990 4.33333333333333 13 3 16 3 gtactgacat 787 0.165148716259990 4.33333333333333 13 3 16 3 gtggtgcacg 788 0.165148716259990 4.33333333333333 13 3 16 3 NM_013879 refGene chr5 114215618 + 106194 graph_last l 95 218 tgtgccccag 789 0.165148716259990 4.33333333333333 13 3 16 3 NM_138599 refGene chr16 57606143 + 54473 graph_last l 40 138 taaattcaca 790 0.166317742827843 0.3125 5 16 6 17 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 791 0.166317742827843 0.3125 5 16 6 17 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 792 0.166317742827843 0.3125 5 16 6 17 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 793 0.166379927522323 0.686868686868687 68 99 85 103 NM_016759 refGene chr11 102066168 + 24069 graph_last l 40 181 ggaagtggtg 794 0.16963363018176 2.4 24 10 30 10 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 795 0.176036260906076 0.464285714285714 13 28 16 29 aatacttttg 796 0.179275832133413 0.333333333333333 6 18 8 19 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 797 0.179275832133413 2.71428571428571 19 7 24 7 NM_023402 refGene chr17 71387797 - 60971 graph_last l 110 291 tgcataatca 798 0.185172189165267 0.46875 15 32 19 33 genomic chr13 71065301 + 0 unique_short s 1 51 acacgacgta 799 0.185683829932272 0.285714285714286 4 14 5 15 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 800 0.185683829932272 0.285714285714286 4 14 5 15 gtgttaacca 801 0.18636824160112 1.59090909090909 70 44 88 46 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 802 0.187003120157486 0.380952380952381 8 21 10 22 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 803 0.187003120157486 0.380952380952381 8 21 10 22 NM_010160 refGene chr2 6463548 - 71738 graph_last l 23 80 ttggtgcttc 804 0.187003120157486 0.380952380952381 8 21 10 22 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 805 0.196088776635028 2.44444444444444 22 9 28 9 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 806 0.196088776635028 0.571428571428571 28 49 35 51 NM_010699 refGene chr7 39739679 + 120908 graph_last 230 648 ccaaataaaa 807 0.200163244966602 0.584905660377358 31 53 39 55 NM_133796 refGene chr11 120131623 - 25586 graph_last l 54 208 tgctctccct 808 0.204986659016153 2.27272727272727 25 11 31 11 gaaataaagt 809 0.206851414224812 0.25 3 12 4 13 gagaaatata 810 0.206851414224812 0.25 3 12 4 13 CA316586 all_est chr6 30666721 + 111294 graph_last l 30 123 tacttacaag 811 0.206851414224812 0.25 3 12 4 13 NM_146005 refGene chr10 73136589 + 13489 graph_last l 31 71 tatgagaaaa 812 0.206851414224812 0.25 3 12 4 13 NM_016804 refGene chr2 75270957 + 75844 graph_last l 24 67 tcctttgtac 813 0.206851414224812 0.25 3 12 4 13 BC046606 knownGene chr5 111426378 - 105964 graph_last l 37 78 ttctggaata 814 0.206851414224812 0.25 3 12 4 13 ttttatttgt 815 0.206851414224812 0.25 3 12 4 13 aaaatacaaa 816 0.212341968031507 0.125 1 8 1 8 aaaatattga 817 0.212341968031507 0.125 1 8 1 8 aaaatgtata 818 0.212341968031507 0.125 1 8 1 8 aaatgctcat 819 0.212341968031507 0.125 1 8 1 8 NM_009846 refGene chr10 45183750 - 12083 graph_last 1 11 agaagttact 820 0.212341968031507 0.125 1 8 1 8 aggagagtgt 821 0.212341968031507 0.375 6 16 7 17 atgaacctat 822 0.212341968031507 0.375 6 16 7 17 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 823 0.212341968031507 0.125 1 8 1 8 NM_153552 refGene chr18 10196917 + 62758 graph_last l 9 34 caacaactga 824 0.212341968031507 0.125 1 8 1 8 cattttacat 825 0.212341968031507 0.125 1 8 1 8 NM_133679 refGene chr16 93125087 - 56032 graph_last 3 27 cttttgctat 826 0.212341968031507 0.125 1 8 1 8 NM_010421 refGene chr9 62015742 + 138265 graph_last 30 52 gagaagtgtg 827 0.212341968031507 0.125 1 8 1 8 NM_020601 refGene chrX 67445347 + 149423 graph_last l 4 27 gtcctctttc 828 0.212341968031507 0.125 1 8 1 8 NM_138748 refGene chr2 30676449 - 73259 graph_last l 2 31 gtggtataat 829 0.212341968031507 0.125 1 8 1 8 AB093219 knownGene chr17 46247346 - 59609 graph_last 2 27 gttagggtat 830 0.212341968031507 0.125 1 8 1 8 NM_023343 refGene chr1 93291700 - 4680 graph_last l 13 45 gttgtaaata 831 0.212341968031507 0.125 1 8 1 8 NM_007377 refGene chr11 119560366 - 25514 graph_last l 73 112 taaagtatat 832 0.212341968031507 0.125 1 8 1 8 taacaagtta 833 0.212341968031507 0.125 1 8 1 8 NM_007920 refGene chr14 71047481 - 43051 graph_last l 15 61 taagaatagc 834 0.212341968031507 0.125 1 8 1 8 NM_009793 refGene chr18 33373772 + 63709 graph_last l 25 59 tacaatgtga 835 0.212341968031507 0.125 1 8 1 8 AY057898 knownGene chr10 124793682 - 16432 graph_last 2 18 taccattaca 836 0.212341968031507 0.125 1 8 1 8 NM_175492 refGene chr11 105593087 + 24424 graph_last l 32 69 tatacagagc 837 0.212341968031507 0.125 1 8 1 8 NM_153053 refGene chr3 98878996 + 87421 graph_last l 31 87 tatagaaaaa 838 0.212341968031507 0.375 6 16 7 17 tgaatgatag 839 0.212341968031507 0.125 1 8 1 8 tgtaagaatt 840 0.212341968031507 0.125 1 8 1 8 NM_011029 refGene chr9 122506722 + 142160 graph_last 0 327 tgtcatctag 841 0.212341968031507 0.416666666666667 10 24 13 25 tgtttttgtt 842 0.212341968031507 0.125 1 8 1 8 ttccttgttc 843 0.212341968031507 0.125 1 8 1 8 NM_011846 refGene chr5 128518388 - 107227 graph_last l 27 59 ttgtccacca 844 0.212341968031507 0.125 1 8 1 8 ttttaaaata 845 0.212341968031507 0.375 6 16 7 17 NM_008996 refGene chr11 20125068 - 18028 graph_last 0 18 ttttcattta 846 0.212341968031507 0.125 1 8 1 8 atcctggtaa 847 0.214251469375453 0.368421052631579 7 19 9 20 taattttttt 848 0.214251469375453 0.368421052631579 7 19 9 20 NM_024499 refGene chr10 83415390 - 14155 graph_last l 39 135 atggcatcag 849 0.214919971549484 3.2 16 5 20 5 NM_027360 refGene chr12 107529636 - 31397 graph_last 192 512 gaacatcact 850 0.214919971549484 0.58 29 50 37 52 NM_173437 refGene chr1 138358972 - 6521 graph_last l 2 51 gcaaggctca 851 0.214919971549484 3.2 16 5 20 5 NM_177876 refGene chr5 122967405 - 106929 graph_last l 8 69 ggagctccgg 852 0.214919971549484 3.2 16 5 20 5 tcgagcagtt 853 0.214919971549484 3.2 16 5 20 5 NM_028601 refGene chr11 6303680 + 17481 graph_last l 21 115 tggtgtctgc 854 0.214919971549484 3.2 16 5 20 5 aaatctaaat 855 0.222261342419063 0.181818181818182 2 11 3 11 genomic chr4 123480209 - 0 unique_long l 3 22 caaataaaag 856 0.222261342419063 0.181818181818182 2 11 3 11 NM_199022 refGene chr2 125929378 + 78833 graph_last l 25 72 cattaaataa 857 0.222261342419063 0.181818181818182 2 11 3 11 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 858 0.222261342419063 0.181818181818182 2 11 3 11 NM_146211 refGene chr8 71964040 - 131093 graph_last l 54 104 gcgttgagat 859 0.222261342419063 0.181818181818182 2 11 3 11 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 860 0.222261342419063 0.181818181818182 2 11 3 11 NM_019656 refGene chrX 122382236 - 151413 graph_last l 8 33 gtggtaccag 861 0.222261342419063 0.181818181818182 2 11 3 11 NM_023671 refGene chr7 89832761 + 123232 graph_last l 10 53 taccatcagc 862 0.222261342419063 0.181818181818182 2 11 3 11 tagagtgtaa 863 0.222261342419063 0.181818181818182 2 11 3 11 NM_133745 refGene chr10 35377401 + 11550 graph_last l 161 241 tatagctgta 864 0.222261342419063 0.181818181818182 2 11 3 11 tttatggaat 865 0.222261342419063 0.181818181818182 2 11 3 11 aaaaagtacc 866 0.225456835880310 8 8 1 10 1 NM_146200 refGene chr7 118708396 - 125113 graph_last l 12 36 aagattcgag 867 0.225456835880310 8 8 1 10 1 NM_016686 refGene chr11 87641994 + 22842 graph_last l 5 24 acctcacctt 868 0.225456835880310 8 8 1 10 1 NM_153529 refGene chr13 36703885 - 33999 graph_last l 49 153 aggggccggt 869 0.225456835880310 8 8 1 10 1 AK129143 knownGene chr18 78788467 - 66286 graph_last l 4 21 caaagagctg 870 0.225456835880310 8 8 1 10 1 caccacgacc 871 0.225456835880310 8 8 1 10 1 cagcgagctg 872 0.225456835880310 8 8 1 10 1 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 873 0.225456835880310 1.53061224489796 75 49 94 51 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 874 0.225456835880310 8 8 1 10 1 AK040979 all_mrna chr1 45458229 - 1989 graph_last 4 14 ggagatcttt 875 0.225456835880310 8 8 1 10 1 ggggagtgga 876 0.225456835880310 8 8 1 10 1 NM_145939 refGene chr16 20229070 - 52176 graph_last 1 32 ggtggaacgg 877 0.225456835880310 8 8 1 10 1 gtgctctctg 878 0.225456835880310 8 8 1 10 1 NM_152895 refGene chr1 137538600 + 6443 graph_last 2 24 taattcagga 879 0.225456835880310 8 8 1 10 1 tcagccccac 880 0.225456835880310 8 8 1 10 1 AK129151 knownGene chr3 104498123 - 87776 graph_last 2 28 tgcagtcagt 881 0.225456835880310 8 8 1 10 1 genomic chr11 35479765 - 0 unique_long l 19 68 tggccacgtg 882 0.225456835880310 8 8 1 10 1 NM_021921 refGene chr15 91144814 - 49270 graph_last l 32 100 tggccctcgg 883 0.225456835880310 8 8 1 10 1 NM_010488 refGene chr4 109064409 - 96128 graph_last l 6 34 tttgttgtga 884 0.225456835880310 8 8 1 10 1 NM_009736 refGene chr4 40984051 - 92417 graph_last l 51 206 gctgccaggg 885 0.226556832970664 2.27272727272727 25 11 32 12 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 886 0.227696578007930 3.5 14 4 17 4 aatggatgaa 887 0.231203013876707 0.2 2 10 2 10 NM_011695 refGene chr14 16734347 + 39565 graph_last 47 123 acaaattatg 888 0.231203013876707 0.2 2 10 2 10 NM_153581 refGene chr8 55141907 - 130191 graph_last l 13 35 actagtagtt 889 0.231203013876707 0.2 2 10 2 10 NM_133999 refGene chr10 42717102 - 11882 graph_last l 36 64 caaatgacta 890 0.231203013876707 0.2 2 10 2 10 cagaacccac 891 0.231203013876707 1.57142857142857 66 42 83 44 NM_145927 refGene chr12 72869915 - 29105 graph_last l 8 33 gaaataaaga 892 0.231203013876707 0.2 2 10 2 10 AK014408 knownGene chr11 44190442 + 19304 graph_last l 42 79 gctacaggta 893 0.231203013876707 0.2 2 10 2 10 gctctagtct 894 0.231203013876707 0.2 2 10 2 10 taaataaatg 895 0.231203013876707 0.2 2 10 2 10 tagtcaggga 896 0.231203013876707 0.55 22 40 28 42 genomic chr12 3277651 + 0 unique_long l 10 36 tatttattga 897 0.231203013876707 0.2 2 10 2 10 NM_080844 refGene chr1 164569762 - 7788 graph_last l 2 21 tgagtggttt 898 0.231203013876707 0.2 2 10 2 10 tgtaaataaa 899 0.231203013876707 0.2 2 10 2 10 ttgacaaact 900 0.231203013876707 0.2 2 10 2 10 NM_144846 refGene chr15 65245104 - 47497 graph_last l 22 70 tttaagaatg 901 0.231203013876707 0.2 2 10 2 10 aaattaataa 902 0.231853959292965 0 0 5 0 5 aacgaatgca 903 0.231853959292965 0 0 5 0 5 aagatgaggg 904 0.231853959292965 Inf 6 0 7 0 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 905 0.231853959292965 0.529411764705882 18 34 22 35 AI047433 all_est chr14 92680835 - 43637 graph_last 1 23 aaggttaaat 906 0.231853959292965 0 0 5 0 5 BB628724 all_est chr16 44204881 + 53880 graph_last 2 10 aatatagtat 907 0.231853959292965 0 0 5 0 5 aatatgcata 908 0.231853959292965 Inf 6 0 7 0 NM_025279 refGene chr13 58182514 + 35372 graph_last 0 14 aatatgtgat 909 0.231853959292965 0 0 5 0 5 genomic chr4 81226908 - 0 unique_short s 0 16 aatcaacccg 910 0.231853959292965 Inf 6 0 7 0 aatccttgcc 911 0.231853959292965 0.461538461538462 12 26 15 27 NM_019658 refGene chr19 53776108 - 70518 graph_last l 9 55 aatctgaaaa 912 0.231853959292965 0.307692307692308 4 13 5 14 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 913 0.231853959292965 0.307692307692308 4 13 5 14 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 914 0.231853959292965 Inf 6 0 7 0 acgtagaccc 915 0.231853959292965 Inf 6 0 7 0 NM_008692 refGene chr4 119895790 + 96803 graph_last 0 30 actctgggcc 916 0.231853959292965 Inf 6 0 7 0 NM_011552 refGene chr18 60870033 + 65230 graph_last 1 15 acttccaagg 917 0.231853959292965 Inf 6 0 7 0 NM_178382 refGene chr2 140770592 - 79692 graph_last 0 15 agacccttgt 918 0.231853959292965 0 0 5 0 5 NM_009936 refGene chr2 180432934 + 82391 graph_last l 5 13 agataaaaac 919 0.231853959292965 0 0 5 0 5 AA607899 all_est chr2 119877739 + 78422 graph_last l 73 275 agcagagaat 920 0.231853959292965 0.529411764705882 18 34 22 35 genomic chr11 80043972 - 0 unique_long l 4 23 agggtgcttc 921 0.231853959292965 Inf 6 0 7 0 genomic chr19 60068218 + 0 unique_long l 4 21 agtcagaatt 922 0.231853959292965 0 0 5 0 5 NM_016747 refGene chrX 90655077 + 150286 graph_last l 42 100 ataatagttg 923 0.231853959292965 0.352941176470588 6 17 8 18 atacttgaca 924 0.231853959292965 Inf 6 0 7 0 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 925 0.231853959292965 0.44 11 25 14 26 AK086668 knownGene chr18 23021909 + 63278 graph_last l 3 9 atgatgtaag 926 0.231853959292965 0 0 5 0 5 atgtggtaat 927 0.231853959292965 0 0 5 0 5 NM_013834 refGene chr8 22345312 + 128587 graph_last 0 8 attgcctata 928 0.231853959292965 Inf 6 0 7 0 attgccttca 929 0.231853959292965 0 0 5 0 5 NM_173439 refGene chr16 31943821 - 52908 graph_last l 5 21 attgctgtat 930 0.231853959292965 0 0 5 0 5 caaaacatac 931 0.231853959292965 0 0 5 0 5 AK014379 knownGene chr6 42780791 + 112182 graph_second 0 18 cacaaggtaa 932 0.231853959292965 0 0 5 0 5 NM_016862 refGene chr19 55509561 - 70624 graph_last 1 73 cacacactca 933 0.231853959292965 Inf 6 0 7 0 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 934 0.231853959292965 0.6625 53 80 67 83 NM_026934 refGene chr2 84026358 + 76261 graph_last 13 46 cacttcctcc 935 0.231853959292965 Inf 6 0 7 0 cagcgcggga 936 0.231853959292965 Inf 6 0 7 0 NM_198293 refGene chr15 8400412 - 45171 graph_last 1 9 cagtatctat 937 0.231853959292965 0 0 5 0 5 NM_133789 refGene chr7 13884301 + 119095 graph_second 1 8 cagtggcctg 938 0.231853959292965 Inf 6 0 7 0 NM_008143 refGene chr11 48430780 - 19538 graph_last l 18 32 ccaaagaggt 939 0.231853959292965 0 0 5 0 5 NM_021273 refGene chr12 107237164 - 31356 graph_second 7 24 cccatccaac 940 0.231853959292965 Inf 6 0 7 0 NM_172948 refGene chr11 116492047 + 25261 graph_second 0 9 ccggccaggc 941 0.231853959292965 Inf 6 0 7 0 cctctctgga 942 0.231853959292965 Inf 6 0 7 0 NM_198649 refGene chr18 61921178 - 65315 graph_last l 4 16 cgagcagaaa 943 0.231853959292965 0 0 5 0 5 genomic chr15 85458259 + 0 unique_long l 2 12 cgggaaccgc 944 0.231853959292965 Inf 6 0 7 0 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 945 0.231853959292965 2.25 27 12 34 13 NM_025301 refGene chr7 97942114 - 123913 graph_last l 27 54 cgtatggctg 946 0.231853959292965 Inf 6 0 7 0 NM_025709 refGene chr2 34950213 - 73642 graph_last l 15 37 cgtccttcct 947 0.231853959292965 Inf 6 0 7 0 ctatattaac 948 0.231853959292965 0.307692307692308 4 13 5 14 NM_008707 refGene chr11 102658151 - 24151 graph_last 1 40 ctccctgccc 949 0.231853959292965 4 12 3 15 3 ctgacttttc 950 0.231853959292965 Inf 6 0 7 0 AK081646 knownGene chr8 34968996 + 129213 graph_last 7 27 ctgcagtctg 951 0.231853959292965 0 0 5 0 5 ctgtaaatac 952 0.231853959292965 0 0 5 0 5 BC057382 knownGene chr14 44059587 - 41177 graph_last l 15 34 cttcatcatc 953 0.231853959292965 Inf 6 0 7 0 cttgaacagg 954 0.231853959292965 0 0 5 0 5 ctttatgtat 955 0.231853959292965 0 0 5 0 5 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 956 0.231853959292965 0.333333333333333 5 15 6 16 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 957 0.231853959292965 Inf 6 0 7 0 NM_021518 refGene chr4 8509605 + 91121 graph_last 7 25 gaaacttctg 958 0.231853959292965 Inf 6 0 7 0 AW557836 all_est chr5_random 21911127 - 109422 graph_last l 3 17 gaaagtactc 959 0.231853959292965 0 0 5 0 5 gaacccaaca 960 0.231853959292965 Inf 6 0 7 0 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 961 0.231853959292965 0.307692307692308 4 13 5 14 NM_172768 refGene chr9 41413125 - 136743 graph_last l 39 128 gaagtccagt 962 0.231853959292965 0.4 8 20 10 21 gaagtgaccc 963 0.231853959292965 Inf 6 0 7 0 NM_007597 refGene chr11 49883883 + 19666 graph_last 0 29 gacatcagag 964 0.231853959292965 Inf 6 0 7 0 NM_010948 refGene chr4 132418597 - 97881 graph_last 4 11 gaccagcacc 965 0.231853959292965 Inf 6 0 7 0 gacctaatga 966 0.231853959292965 Inf 6 0 7 0 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 967 0.231853959292965 0.307692307692308 4 13 5 14 NM_145518 refGene chr1 64769274 - 3033 graph_last l 5 21 gactgtacgt 968 0.231853959292965 0 0 5 0 5 AV070736 all_est chr1 94583968 + 4754 graph_last l 17 37 gagcacatag 969 0.231853959292965 0 0 5 0 5 NM_013854 refGene chr17 35659155 - 59005 graph_last l 13 42 gagcgactta 970 0.231853959292965 Inf 6 0 7 0 NM_026552 refGene chr6 115145019 + 116125 graph_second 5 13 gaggagatcg 971 0.231853959292965 Inf 6 0 7 0 NM_008162 refGene chr10 82359503 + 14033 graph_last l 10 22 gaggagcccc 972 0.231853959292965 Inf 6 0 7 0 gaggcatttc 973 0.231853959292965 5 10 2 13 2 NM_007794 refGene chr8 107184471 + 132995 graph_last l 6 21 gagggtacag 974 0.231853959292965 Inf 6 0 7 0 NM_176902 refGene chr11 115943906 + 25214 graph_last 2 15 gatggccaga 975 0.231853959292965 5 10 2 13 2 gcacagtatc 976 0.231853959292965 Inf 6 0 7 0 NM_019913 refGene chr15 79269778 - 48292 graph_last l 5 15 gccaaagtgg 977 0.231853959292965 Inf 6 0 7 0 AK009957 knownGene chr10 32254639 + 11403 graph_last l 11 39 gccacagcct 978 0.231853959292965 Inf 6 0 7 0 gccattttct 979 0.231853959292965 0 0 5 0 5 gccctgggcg 980 0.231853959292965 Inf 6 0 7 0 genomic chr4 107497604 - 0 unique_long l 10 20 gccctttctt 981 0.231853959292965 0 0 5 0 5 genomic chrUn_random 44088880 - 0 unique_long l 26 54 gcctcagttc 982 0.231853959292965 0 0 5 0 5 gcggcggcgg 983 0.231853959292965 Inf 6 0 7 0 gcggcggggc 984 0.231853959292965 2.57142857142857 18 7 23 7 NM_023579 refGene chr14 114051162 + 44438 graph_second 1 16 gctgccccta 985 0.231853959292965 0 0 5 0 5 gctgggcggg 986 0.231853959292965 5 10 2 13 2 gctttgaata 987 0.231853959292965 0 0 5 0 5 NM_008608 refGene chr14 45531325 + 41281 graph_last l 2 20 ggacgcccaa 988 0.231853959292965 Inf 6 0 7 0 ggatagaaag 989 0.231853959292965 Inf 6 0 7 0 NM_175347 refGene chr16 3959247 - 51087 graph_last 1 9 ggattcagag 990 0.231853959292965 0 0 5 0 5 ggcctgcccc 991 0.231853959292965 Inf 6 0 7 0 NM_175514 refGene chr2 84247209 + 76272 graph_last l 32 80 ggcgggaagc 992 0.231853959292965 Inf 6 0 7 0 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 993 0.231853959292965 0.461538461538462 12 26 15 27 AA756419 all_est chr12 106726625 - 31305 graph_last 0 11 gggagggggg 994 0.231853959292965 Inf 6 0 7 0 NM_177618 refGene chr11 71360387 + 21233 graph_last l 19 58 ggggctggca 995 0.231853959292965 Inf 6 0 7 0 gggggagagg 996 0.231853959292965 Inf 6 0 7 0 gggggagtga 997 0.231853959292965 Inf 6 0 7 0 ggtcagggca 998 0.231853959292965 Inf 6 0 7 0 NM_025645 refGene chr4_random 7308269 + 100008 graph_last l 6 14 ggtgagatcc 999 0.231853959292965 Inf 6 0 7 0 NM_183180 refGene chr2 93817607 + 77024 graph_last l 24 68 gtcactattt 1000 0.231853959292965 0.352941176470588 6 17 8 18 gtcctggaaa 1001 0.231853959292965 0 0 5 0 5 NM_023565 refGene chr2 167559776 + 81502 graph_last 14 25 gtctctgttg 1002 0.231853959292965 0 0 5 0 5 genomic chr17 44965216 + 0 unique_long l 16 43 gtctgcccgg 1003 0.231853959292965 Inf 6 0 7 0 gtctttgaag 1004 0.231853959292965 Inf 6 0 7 0 NM_025797 refGene chr18 84591883 + 66590 graph_last l 24 105 gtgatgtttc 1005 0.231853959292965 0.4 8 20 10 21 NM_011591 refGene chrX 6466896 + 147054 graph_last 3 21 gtgggctctg 1006 0.231853959292965 Inf 6 0 7 0 NM_008083 refGene chr16 42311426 + 53725 graph_last l 6 17 gtggtatctt 1007 0.231853959292965 0 0 5 0 5 BC059902 knownGene chr9 112986201 - 141560 graph_last l 5 29 gtgtgcctcc 1008 0.231853959292965 Inf 6 0 7 0 BC025881 knownGene chr5 51582035 - 102772 graph_last l 13 41 gttcttctac 1009 0.231853959292965 0 0 5 0 5 gttggaaaca 1010 0.231853959292965 Inf 6 0 7 0 NM_175545 refGene chr14 18087396 - 39614 graph_last l 31 69 gtttcatttt 1011 0.231853959292965 0 0 5 0 5 taaacagaag 1012 0.231853959292965 0 0 5 0 5 taaagtgttt 1013 0.231853959292965 0 0 5 0 5 taattgaaac 1014 0.231853959292965 0 0 5 0 5 NM_009239 refGene chr12 114287254 - 31691 graph_second l 7 14 tacaagttgt 1015 0.231853959292965 0 0 5 0 5 genomic chr13 54365790 + 0 unique_long l 16 52 tacaattgtc 1016 0.231853959292965 0.333333333333333 5 15 6 16 NM_025945 refGene chr14 61992042 - 42522 graph_last l 16 33 tacataacca 1017 0.231853959292965 0 0 5 0 5 tacctattgt 1018 0.231853959292965 0.4 8 20 10 21 NM_011130 refGene chr8 21486072 - 128541 graph_last l 56 93 tactatagtc 1019 0.231853959292965 0.307692307692308 4 13 5 14 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 1020 0.231853959292965 0.352941176470588 6 17 8 18 NM_177343 refGene chr2 5212156 - 71660 graph_last l 37 60 tatacatatc 1021 0.231853959292965 0 0 5 0 5 tatactcttt 1022 0.231853959292965 0 0 5 0 5 NM_010698 refGene chr5 43614158 - 102391 graph_last l 4 12 tatagaggaa 1023 0.231853959292965 0 0 5 0 5 tatatataca 1024 0.231853959292965 0 0 5 0 5 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 1025 0.231853959292965 0.4 8 20 10 21 tatgtcacct 1026 0.231853959292965 0.307692307692308 4 13 5 14 NM_029949 refGene chr4 82142108 + 94556 graph_last 0 5 tatgttcctg 1027 0.231853959292965 0 0 5 0 5 NM_007869 refGene chr2 18319325 + 72345 graph_last 13 26 tattaaaatg 1028 0.231853959292965 0 0 5 0 5 NM_172661 refGene chr2 32506465 + 73413 graph_last l 14 50 tcacaatcct 1029 0.231853959292965 Inf 6 0 7 0 NM_153595 refGene chr10 89048034 - 14566 graph_last l 36 61 tcacagacac 1030 0.231853959292965 Inf 6 0 7 0 NM_027355 refGene chr16 32013542 + 52918 graph_last l 5 18 tcagaggcaa 1031 0.231853959292965 0 0 5 0 5 BF120450 all_est chrX 29343889 - 147963 graph_last 0 13 tcgctgctgc 1032 0.231853959292965 0 0 5 0 5 tctacaagaa 1033 0.231853959292965 0.674698795180723 56 83 71 87 NM_017478 refGene chrUn_random 11887936 - 143090 graph_last l 5 24 tctcactcac 1034 0.231853959292965 0 0 5 0 5 NM_178780 refGene chr7 101311518 + 124117 graph_last l 10 23 tctgtactta 1035 0.231853959292965 0 0 5 0 5 tgactgggag 1036 0.231853959292965 0 0 5 0 5 NM_198894 refGene chr11 75988055 - 21730 graph_last l 94 280 tgagagggaa 1037 0.231853959292965 0.540540540540541 20 37 25 39 tgcaagctga 1038 0.231853959292965 5 10 2 13 2 tgctttgatt 1039 0.231853959292965 0 0 5 0 5 NM_007936 refGene chr1 79102102 - 3765 graph_last l 16 47 tggaaagttc 1040 0.231853959292965 Inf 6 0 7 0 tgggacgcca 1041 0.231853959292965 Inf 6 0 7 0 NM_026829 refGene chr9 91718217 + 140141 graph_last 0 22 tgtccttctt 1042 0.231853959292965 Inf 6 0 7 0 NM_020614 refGene chr12 18957716 + 26575 graph_last l 6 17 tgtctttata 1043 0.231853959292965 0 0 5 0 5 tgtgtgaggt 1044 0.231853959292965 0.691358024691358 56 81 70 85 NM_020012 refGene chr18 5317571 - 62493 graph_last 70 161 tgttttctac 1045 0.231853959292965 0.333333333333333 5 15 6 16 ttaaaaaaag 1046 0.231853959292965 0 0 5 0 5 ttaaaaggag 1047 0.231853959292965 0 0 5 0 5 ttaaacacgt 1048 0.231853959292965 0 0 5 0 5 ttaacactac 1049 0.231853959292965 Inf 6 0 7 0 NM_020578 refGene chr17 74248859 + 61106 graph_last l 23 52 ttaatacaac 1050 0.231853959292965 0 0 5 0 5 AK012697 knownGene chr5 122772560 - 106898 graph_last l 9 27 ttaatcagga 1051 0.231853959292965 0 0 5 0 5 NM_025971 refGene chr17 66098335 - 60700 graph_last l 13 24 ttatttaata 1052 0.231853959292965 0 0 5 0 5 ttccagtctt 1053 0.231853959292965 0 0 5 0 5 NM_144517 refGene chr5 18158177 - 100799 graph_last 2 17 ttccctcctc 1054 0.231853959292965 0 0 5 0 5 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 1055 0.231853959292965 5 10 2 13 2 NM_013629 refGene chr3 107009648 + 87941 graph_last l 5 21 ttggggtttc 1056 0.231853959292965 Inf 6 0 7 0 NM_146128 refGene chr2 157390043 + 80791 graph_last l 129 258 ttgtgagaat 1057 0.231853959292965 0.5 16 32 20 33 genomic chr18 70041110 - 0 unique_long l 9 33 ttgtgcttgt 1058 0.231853959292965 Inf 6 0 7 0 NM_025556 refGene chr8 14593612 - 128179 graph_last l 25 66 ttgttgtggt 1059 0.231853959292965 0 0 5 0 5 BC051169 knownGene chr15 28595290 - 45887 graph_last l 15 58 tttacacagt 1060 0.231853959292965 0.307692307692308 4 13 5 14 NM_008224 refGene chrX 63545679 - 149215 graph_last l 5 26 tttagtcaaa 1061 0.231853959292965 Inf 6 0 7 0 NM_008990 refGene chr7 16667851 - 119346 graph_last 27 70 tttataagtt 1062 0.231853959292965 Inf 6 0 7 0 NM_008908 refGene chr18 53697959 - 64884 graph_last 0 18 tttgtaaaaa 1063 0.231853959292965 Inf 6 0 7 0 NM_008687 refGene chr4 80899574 - 94453 graph_last l 4 24 tttgtaaagc 1064 0.231853959292965 Inf 6 0 7 0 ttttattaaa 1065 0.231853959292965 0.307692307692308 4 13 5 14 NM_019797 refGene chr9 68371211 + 138776 graph_last 0 8 tttttggcag 1066 0.231853959292965 Inf 6 0 7 0 attgtttatg 1067 0.233922254069853 0.666666666666667 48 72 60 75 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 1068 0.24377575754246 0.434782608695652 10 23 13 24 NM_007835 refGene chr6 84323318 + 114272 graph_last l 44 213 cgcggcaggc 1069 0.253943252112598 2.375 19 8 24 8 tgaaaccgcg 1070 0.253943252112598 2.375 19 8 24 8 NM_011486 refGene chr11 100552220 - 23906 graph_last 2 202 gcatcctgtt 1071 0.257993469106881 0.428571428571429 9 21 11 22 NM_007379 refGene chr2 25714940 + 72843 graph_last l 17 177 ggagcaggac 1072 0.257993469106881 0.388888888888889 7 18 9 19 taatatgtag 1073 0.257993469106881 0.388888888888889 7 18 9 19 NM_175134 refGene chr15 37287708 + 46308 graph_last l 86 224 tgttccacac 1074 0.257993469106881 0.388888888888889 7 18 9 19 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 1075 0.259003846773784 2.27272727272727 25 11 31 12 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 1076 0.259003846773784 2.27272727272727 25 11 31 12 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 1077 0.259003846773784 2.27272727272727 25 11 31 12 gatgacttgc 1078 0.259003846773784 0.4 6 15 7 16 ttagaacgtg 1079 0.259003846773784 0.4 6 15 7 16 NM_021500 refGene chr5 31836376 - 101788 graph_last l 23 108 ttgatgttga 1080 0.259003846773784 0.4 6 15 7 16 NM_145969 refGene chr14 21167374 + 39829 graph_last l 62 159 ttgcttttgg 1081 0.259003846773784 2.27272727272727 25 11 31 12 NM_008974 refGene chr4 128752989 + 97529 graph_last 40 105 cgttttctga 1082 0.262066721906798 3 15 5 19 5 NM_007376 refGene chr6 130377420 - 117204 graph_last l 12 80 ggtacaccgc 1083 0.262066721906798 3 15 5 19 5 NM_010151 refGene chr13 76260992 - 36347 graph_last l 16 69 tccatccagt 1084 0.262066721906798 3 15 5 19 5 NM_133218 refGene chr3 9563925 - 82994 graph_last l 10 33 aagtaagtct 1085 0.262288988772744 0.272727272727273 3 11 4 12 NM_173364 refGene chr9 125233362 - 142346 graph_last l 15 50 acataagagt 1086 0.262288988772744 0.272727272727273 3 11 4 12 genomic chr19 36982476 + 0 unique_long l 48 116 caaataaact 1087 0.262288988772744 0.272727272727273 3 11 4 12 genomic chr3 87878262 + 0 unique_long l 22 144 tgggtttaga 1088 0.262288988772744 0.272727272727273 3 11 4 12 tttttgtaca 1089 0.262288988772744 0.272727272727273 3 11 4 12 ttgggccaga 1090 0.263590384627938 1.75 42 24 53 25 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 1091 0.266376751805632 0.545454545454545 18 33 22 34 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 1092 0.269443716136958 2 32 16 40 17 ggctgtcctg 1093 0.269443716136958 2 32 16 40 17 gtggctcata 1094 0.269443716136958 2 32 16 40 17 caccaccgtt 1095 0.274201716958565 1.41791044776119 95 67 119 70 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 1096 0.275180410907002 0.458333333333333 11 24 14 25 aaactggaat 1097 0.283424716973966 7 7 1 9 1 NM_027569 refGene chr11 93709672 + 23144 graph_last l 22 65 aaatatatat 1098 0.283424716973966 0.2 2 10 3 10 aacatcatct 1099 0.283424716973966 3.66666666666667 11 3 14 3 aagaaaacat 1100 0.283424716973966 0.421052631578947 8 19 10 20 NM_020027 refGene chr17 34814955 - 58932 graph_last 15 63 aaggggaaag 1101 0.283424716973966 3.25 13 4 16 4 BB674281 all_est chr3 90690195 + 86687 graph_last 0 19 aattaatcaa 1102 0.283424716973966 0.2 2 10 3 10 acacagaaat 1103 0.283424716973966 0.2 2 10 3 10 BB754985 all_est chr6 122632802 - 116716 graph_last l 12 30 acccacaaga 1104 0.283424716973966 0.142857142857143 1 7 1 7 agaaataaaa 1105 0.283424716973966 0.357142857142857 5 14 6 15 BC046776 knownGene chr3 133580763 - 89303 graph_last l 9 25 agactttgta 1106 0.283424716973966 0.142857142857143 1 7 1 7 genomic chr14 48083563 + 0 unique_long l 3 27 agatattaaa 1107 0.283424716973966 0.2 2 10 3 10 agtggtcaag 1108 0.283424716973966 0.421052631578947 8 19 10 20 NM_175246 refGene chr4 124031212 + 97116 graph_last l 5 24 ataggcaaag 1109 0.283424716973966 0.142857142857143 1 7 1 7 atcaaatggt 1110 0.283424716973966 0.142857142857143 1 7 1 7 AK045780 knownGene chr1 31215031 - 1218 graph_last l 7 23 atcttgtgtt 1111 0.283424716973966 0.142857142857143 1 7 1 7 NM_009461 refGene chr2 121130654 - 78554 graph_last l 7 24 atgaagttat 1112 0.283424716973966 0.142857142857143 1 7 1 7 NM_133676 refGene chr14 42732257 + 41088 graph_last l 7 48 atgaatgccc 1113 0.283424716973966 3.66666666666667 11 3 14 3 NM_027016 refGene chr3 31714208 + 83982 graph_last l 55 162 atgggtcatc 1114 0.283424716973966 3.66666666666667 11 3 14 3 NM_025279 refGene chr13 58182021 - 35372 graph_second 1 37 atgttagtta 1115 0.283424716973966 0.2 2 10 3 10 AK038042 knownGene chr11 115842027 - 25204 graph_last l 10 62 attcttaaaa 1116 0.283424716973966 0.142857142857143 1 7 1 7 cacaacgccg 1117 0.283424716973966 7 7 1 9 1 cacacacaca 1118 0.283424716973966 3.66666666666667 11 3 14 3 NM_172146 refGene chr5 77440850 + 104071 graph_last l 23 97 cacctgcttt 1119 0.283424716973966 0.357142857142857 5 14 6 15 cagaaacagg 1120 0.283424716973966 0.375 6 16 8 17 NM_015735 refGene chr19 10550968 + 68008 graph_last l 7 18 cagaaccgac 1121 0.283424716973966 7 7 1 9 1 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 1122 0.283424716973966 0.2 2 10 3 10 BC040802 knownGene chr1 189041664 + 9388 graph_last l 8 33 catcctgata 1123 0.283424716973966 7 7 1 9 1 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 1124 0.283424716973966 0.518518518518518 14 27 17 28 cccaggctct 1125 0.283424716973966 7 7 1 9 1 AY301068 knownGene chr10 26053645 - 11071 graph_last l 16 40 ccctgtaata 1126 0.283424716973966 0.142857142857143 1 7 1 7 BC031915 knownGene chr15 101648680 + 49947 graph_last l 11 43 cctctggtct 1127 0.283424716973966 0.2 2 10 3 10 NM_009041 refGene chr9 54126623 + 137643 graph_last l 9 39 cgaaggagaa 1128 0.283424716973966 7 7 1 9 1 NM_023603 refGene chr4 125940891 + 97273 graph_last 13 41 cgtactgagc 1129 0.283424716973966 3.25 13 4 16 4 NM_009440 refGene chrX 93366101 - 150509 graph_second l 3 13 ctaatgctca 1130 0.283424716973966 0.142857142857143 1 7 1 7 BC050210 knownGene chr1 37245345 - 1535 graph_last 1 18 ctatggatac 1131 0.283424716973966 0.2 2 10 3 10 NM_145571 refGene chr6 84470782 + 114286 graph_last l 9 23 ctatgggctg 1132 0.283424716973966 7 7 1 9 1 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 1133 0.283424716973966 0.48 12 25 15 26 NM_021549 refGene chr7 37782274 - 120715 graph_last 36 97 ctcctgtact 1134 0.283424716973966 3.25 13 4 16 4 NM_026543 refGene chr11 49858631 + 19656 graph_last l 3 30 ctctccggaa 1135 0.283424716973966 0.2 2 10 3 10 ctctcttcta 1136 0.283424716973966 0.558823529411765 19 34 24 36 ctgaaatgat 1137 0.283424716973966 0.2 2 10 3 10 NM_172266 refGene chr1 195572097 + 9722 graph_last l 75 143 ctgatgtcat 1138 0.283424716973966 0.142857142857143 1 7 1 7 NM_016709 refGene chr13 52603003 - 34947 graph_last l 20 78 ctgcattaag 1139 0.283424716973966 0.2 2 10 3 10 NM_009336 refGene chr3 97823540 + 87276 graph_last l 7 48 ctgggaccgg 1140 0.283424716973966 3.25 13 4 16 4 ctgtgtaaag 1141 0.283424716973966 7 7 1 9 1 cttctatttg 1142 0.283424716973966 0.142857142857143 1 7 1 7 NM_018799 refGene chr4 128521641 + 97495 graph_last l 10 55 gaaagggctg 1143 0.283424716973966 7 7 1 9 1 CF540728 all_est chr16 35052211 + 53196 graph_last l 11 58 gaaattgaaa 1144 0.283424716973966 0.142857142857143 1 7 1 7 gaagtgtaag 1145 0.283424716973966 0.142857142857143 1 7 1 7 gaatagtaat 1146 0.283424716973966 0.2 2 10 3 10 gaccccaaaa 1147 0.283424716973966 0.142857142857143 1 7 1 7 NM_026493 refGene chr1 10123852 - 322 graph_last l 28 88 gactgatgtc 1148 0.283424716973966 0.2 2 10 3 10 NM_021485 refGene chr19 3957738 + 67379 graph_last l 8 37 gagaatgggg 1149 0.283424716973966 7 7 1 9 1 NM_134024 refGene chr11 100789952 + 23939 graph_last l 15 49 gagcagttcc 1150 0.283424716973966 7 7 1 9 1 gagcccatca 1151 0.283424716973966 7 7 1 9 1 gaggccagaa 1152 0.283424716973966 0.142857142857143 1 7 1 7 NM_023336 refGene chr2 27723480 - 73019 graph_last l 9 47 gaggcgcctg 1153 0.283424716973966 3.25 13 4 16 4 NM_024231 refGene chr19 6113493 - 67639 graph_last l 13 49 gatccttcta 1154 0.283424716973966 0.142857142857143 1 7 1 7 gattagggtg 1155 0.283424716973966 0.421052631578947 8 19 10 20 NM_019796 refGene chr9 91413676 - 140127 graph_last 14 65 gcaaacaatc 1156 0.283424716973966 0.375 6 16 8 17 NM_019400 refGene chr11 70512333 + 21202 graph_last l 2 49 gcaagcaaaa 1157 0.283424716973966 7 7 1 9 1 NM_028119 refGene chr2 91827620 - 76822 graph_last l 20 39 gccaataaaa 1158 0.283424716973966 0.142857142857143 1 7 1 7 gcctatccaa 1159 0.283424716973966 0.357142857142857 5 14 6 15 gcctcccctt 1160 0.283424716973966 3.25 13 4 16 4 gcctctcctc 1161 0.283424716973966 0.2 2 10 3 10 BE847433 all_est chr11 82852395 - 22348 graph_last 3 18 gcgctctgca 1162 0.283424716973966 7 7 1 9 1 AK014379 knownGene chr6 42782922 - 112182 graph_last l 27 71 gcggtccatt 1163 0.283424716973966 7 7 1 9 1 NM_133971 refGene chr8 12323570 - 127998 graph_last l 3 32 gcgtggcagg 1164 0.283424716973966 3.25 13 4 16 4 NM_175752 refGene chr2 74005159 - 75776 graph_last l 74 98 gcttaatgta 1165 0.283424716973966 0.142857142857143 1 7 1 7 NM_015737 refGene chr10 101503911 + 15248 graph_last 0 25 ggcatctctt 1166 0.283424716973966 7 7 1 9 1 genomic chr4 105908485 + 0 unique_long l 4 14 ggccttgggg 1167 0.283424716973966 7 7 1 9 1 NM_007742 refGene chr11 94532009 + 23230 graph_last 0 52 gggccccctg 1168 0.283424716973966 3.25 13 4 16 4 NM_013785 refGene chr9 110683038 + 141326 graph_last l 7 73 ggttgggagc 1169 0.283424716973966 3.66666666666667 11 3 14 3 NM_008525 refGene chr4 61087932 - 93772 graph_last l 2 19 gtaggtccta 1170 0.283424716973966 7 7 1 9 1 NM_053086 refGene chr19 46247002 - 70153 graph_last 19 70 gtcaaagttc 1171 0.283424716973966 0.375 6 16 8 17 NM_011085 refGene chr13 100123389 - 37473 graph_last l 11 38 gtcggttgta 1172 0.283424716973966 0.142857142857143 1 7 1 7 AK010234 knownGene chr11 57407928 + 20174 graph_last 17 41 gtgaagagta 1173 0.283424716973966 7 7 1 9 1 gtgcatccag 1174 0.283424716973966 3.25 13 4 16 4 NM_177608 refGene chr2 125992273 - 78837 graph_last l 36 72 gtgccaacag 1175 0.283424716973966 7 7 1 9 1 NM_016959 refGene chr3 88105443 + 86463 graph_last 3 19 gtgccgaccg 1176 0.283424716973966 7 7 1 9 1 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 1177 0.283424716973966 7 7 1 9 1 AK122429 knownGene chr8 80319227 + 131527 graph_last l 5 36 gtgtgatgct 1178 0.283424716973966 0.2 2 10 3 10 NM_022309 refGene chr8 106726965 + 132922 graph_last l 10 29 gtgttaatgt 1179 0.283424716973966 0.142857142857143 1 7 1 7 NM_146005 refGene chr10 73138536 + 13489 graph_last l 40 78 gttaataaac 1180 0.283424716973966 0.2 2 10 3 10 NM_199310 refGene chr2 119288454 - 78348 graph_last l 37 89 taaagtttga 1181 0.283424716973966 0.357142857142857 5 14 6 15 taaatatata 1182 0.283424716973966 0.142857142857143 1 7 1 7 taaatgtatt 1183 0.283424716973966 0.142857142857143 1 7 1 7 taaattaaat 1184 0.283424716973966 0.142857142857143 1 7 1 7 NM_145542 refGene chr3 110802401 - 88234 graph_last l 44 121 taacaaagga 1185 0.283424716973966 0.2 2 10 3 10 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 1186 0.283424716973966 0.375 6 16 8 17 NM_007935 refGene chr18 6648598 + 62583 graph_last l 2 10 taatgccctg 1187 0.283424716973966 0.142857142857143 1 7 1 7 NM_013865 refGene chr2 157553357 - 80820 graph_last l 65 106 taatgtccct 1188 0.283424716973966 0.142857142857143 1 7 1 7 tacagtctac 1189 0.283424716973966 0.142857142857143 1 7 1 7 NM_008562 refGene chr3 98363562 + 87354 graph_last l 24 42 tacattctat 1190 0.283424716973966 0.142857142857143 1 7 1 7 NM_009672 refGene chr9 64726839 + 138431 graph_last l 35 106 tacctcgatg 1191 0.283424716973966 2.57142857142857 18 7 22 7 AK081003 knownGene chr13 87441680 + 36626 graph_last l 80 200 taggatgttg 1192 0.283424716973966 0.375 6 16 8 17 NM_130879 refGene chr4 136440493 + 98264 graph_last l 7 25 taggctatca 1193 0.283424716973966 0.142857142857143 1 7 1 7 tatagtctat 1194 0.283424716973966 0.357142857142857 5 14 6 15 NM_144912 refGene chr5 121388374 - 106736 graph_last l 23 67 tatgggatag 1195 0.283424716973966 0.2 2 10 3 10 NM_146087 refGene chr18 61709666 + 65292 graph_last l 35 105 tatgtgtgtt 1196 0.283424716973966 0.375 6 16 8 17 NM_013862 refGene chr1 163759962 - 7724 graph_last l 12 24 tattatgtat 1197 0.283424716973966 0.142857142857143 1 7 1 7 NM_011462 refGene chr13 50837966 + 34831 graph_last l 45 104 tcaaagagac 1198 0.283424716973966 0.357142857142857 5 14 6 15 NM_052976 refGene chrX 88394495 - 150213 graph_last l 3 25 tcaaagccta 1199 0.283424716973966 0.2 2 10 3 10 NM_029979 refGene chr14 58039479 - 42269 graph_last 5 18 tcagttgtgg 1200 0.283424716973966 0.142857142857143 1 7 1 7 NM_021278 refGene chrX 155231101 - 152783 graph_second l 10 20 tctgacaaac 1201 0.283424716973966 7 7 1 9 1 NM_053073 refGene chr4 106735012 + 95875 graph_last l 8 27 tcttagtaac 1202 0.283424716973966 7 7 1 9 1 NM_172787 refGene chr10 27146708 - 11123 graph_last l 6 32 tgatatgaat 1203 0.283424716973966 0.142857142857143 1 7 1 7 NM_053090 refGene chr5 22128338 - 101086 graph_last l 5 17 tgatgctaaa 1204 0.283424716973966 0.142857142857143 1 7 1 7 tgcagcactg 1205 0.283424716973966 3.66666666666667 11 3 14 3 NM_134014 refGene chr11 23195325 + 18254 graph_last l 9 30 tgcatatcat 1206 0.283424716973966 0.142857142857143 1 7 1 7 AK032356 knownGene chr6 18309573 - 110671 graph_last b 8 28 tgcgacttcg 1207 0.283424716973966 7 7 1 9 1 tgctgccatt 1208 0.283424716973966 7 7 1 9 1 NM_021526 refGene chr2 62189433 + 75066 graph_last 19 96 tggatgtgct 1209 0.283424716973966 0.421052631578947 8 19 10 20 NM_153140 refGene chr17 25582440 - 57952 graph_last l 12 62 tgtcagctac 1210 0.283424716973966 0.2 2 10 3 10 tgtgaaagca 1211 0.283424716973966 0.2 2 10 3 10 tgttcaaaat 1212 0.283424716973966 0.142857142857143 1 7 1 7 tgtttattga 1213 0.283424716973966 0.142857142857143 1 7 1 7 ttaaagtaat 1214 0.283424716973966 0.142857142857143 1 7 1 7 NM_029505 refGene chr8 21645298 - 128551 graph_last l 44 76 ttaaagtctt 1215 0.283424716973966 0.142857142857143 1 7 1 7 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 1216 0.283424716973966 0.2 2 10 3 10 NM_008974 refGene chr4 128752984 - 97529 graph_last 9 35 ttctcataag 1217 0.283424716973966 7 7 1 9 1 ttctgtgtgg 1218 0.283424716973966 3.66666666666667 11 3 14 3 AK048260 knownGene chr8 111573095 + 133351 graph_last l 19 45 ttgcagcaaa 1219 0.283424716973966 0.142857142857143 1 7 1 7 ttggctcaca 1220 0.283424716973966 7 7 1 9 1 NM_008500 refGene chr2 36354993 - 73731 graph_last l 6 28 ttgtgctttg 1221 0.283424716973966 0.2 2 10 3 10 NM_025553 refGene chr19 4786076 + 67476 graph_last l 20 41 tttctgtaca 1222 0.283424716973966 0.142857142857143 1 7 1 7 tttgcagcat 1223 0.283424716973966 7 7 1 9 1 NM_008112 refGene chr13 3314926 + 32298 graph_last l 80 154 ttttgtttat 1224 0.283424716973966 0.357142857142857 5 14 6 15 tttttggtgt 1225 0.283424716973966 0.558823529411765 19 34 24 36 ttttttttcc 1226 0.283424716973966 0.357142857142857 5 14 6 15 BE632211 all_est chrUn_random 7803125 + 142887 graph_last 0 698 ctgcggcttc 1227 0.291432675511817 0.53125 17 32 21 33 NM_019802 refGene chr6 73476551 - 113867 graph_last 4 80 aaacgaaagt 1228 0.29338188056556 5 10 2 12 2 NM_007991 refGene chr7 21800201 + 119670 graph_last 18 63 aagccgcagg 1229 0.29338188056556 5 10 2 12 2 acgccattgg 1230 0.29338188056556 5 10 2 12 2 NM_008687 refGene chr4 80899931 + 94453 graph_last l 2 27 agctggtggt 1231 0.29338188056556 5 10 2 12 2 ccgtgggcat 1232 0.29338188056556 5 10 2 12 2 NM_008997 refGene chr17 33385280 - 58766 graph_last 20 98 ctggtgggca 1233 0.29338188056556 5 10 2 12 2 gtaggatctt 1234 0.29338188056556 5 10 2 12 2 NM_145839 refGene chr5 98390761 - 105044 graph_last l 4 27 tcttaaccgt 1235 0.29338188056556 5 10 2 12 2 NM_010561 refGene chr9 21973540 + 135641 graph_last 29 57 ttcactgggc 1236 0.29338188056556 5 10 2 12 2 aactgaacaa 1237 0.295583963875847 0.222222222222222 2 9 2 9 NM_026729 refGene chr11 114916501 + 25076 graph_last l 7 62 aatcactggc 1238 0.295583963875847 0.222222222222222 2 9 2 9 acaaaataaa 1239 0.295583963875847 0.222222222222222 2 9 2 9 NM_178060 refGene chr11 98352515 + 23676 graph_second l 6 31 agtctgtttc 1240 0.295583963875847 0.222222222222222 2 9 2 9 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 1241 0.295583963875847 0.222222222222222 2 9 2 9 attgattaaa 1242 0.295583963875847 0.222222222222222 2 9 2 9 atttttgtat 1243 0.295583963875847 0.222222222222222 2 9 2 9 NM_009481 refGene chrX 11203087 - 147308 graph_last l 10 41 catctgtgta 1244 0.295583963875847 0.222222222222222 2 9 2 9 catctttatg 1245 0.295583963875847 0.222222222222222 2 9 2 9 NM_011342 refGene chr3 100809105 + 87579 graph_last l 42 77 ctgcaactta 1246 0.295583963875847 0.222222222222222 2 9 2 9 gaaaaaatat 1247 0.295583963875847 0.222222222222222 2 9 2 9 NM_008149 refGene chr19 55260342 - 70609 graph_last l 14 60 gagttttgtt 1248 0.295583963875847 0.222222222222222 2 9 2 9 NM_019652 refGene chr8 85880619 - 131877 graph_last 14 48 gggcagagtt 1249 0.295583963875847 0.222222222222222 2 9 2 9 gtcgcaggca 1250 0.295583963875847 2.66666666666667 16 6 20 6 gtgtatcttt 1251 0.295583963875847 0.617021276595745 29 47 36 49 NM_146170 refGene chr6 87846637 + 114579 graph_last l 5 25 taatatagat 1252 0.295583963875847 0.222222222222222 2 9 2 9 NM_019942 refGene chrX 28238769 - 147895 graph_last l 17 49 tcaattttca 1253 0.295583963875847 0.222222222222222 2 9 2 9 tcacaatgag 1254 0.295583963875847 0.222222222222222 2 9 2 9 ttaaacagca 1255 0.295583963875847 0.222222222222222 2 9 2 9 tttttgatga 1256 0.295583963875847 1.83333333333333 33 18 42 19 NM_019685 refGene chr6 89947633 + 114790 graph_last l 44 104 gtggtttgga 1257 0.299701043525355 0.454545454545455 10 22 13 23 ctgtcatttg 1258 0.300627522068883 0.571428571428571 20 35 25 37 NM_019402 refGene chr14 45986663 + 41330 graph_last 48 272 gtattcccct 1259 0.300627522068883 1.58064516129032 49 31 62 32 aagaaaatag 1260 0.301828988608153 0.666666666666667 40 60 50 63 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 1261 0.307961142053092 2.18181818181818 24 11 30 12 gcacaacttg 1262 0.309225901073534 1.25517241379310 182 145 229 151 ggtttgttca 1263 0.311176074865058 2.25 18 8 23 8 NM_010470 refGene chr4 137020995 + 98319 graph_last l 45 142 aacttttaaa 1264 0.311868362551186 0.5 13 26 16 27 NM_030210 refGene chr5 124411318 + 107069 graph_last l 7 58 cacacctgta 1265 0.311868362551186 0.333333333333333 4 12 5 13 NM_008717 refGene chr6 85114223 + 114381 graph_last 26 70 gataatacct 1266 0.311868362551186 0.333333333333333 4 12 5 13 NM_138596 refGene chr13 67123813 + 35924 graph_last l 17 106 ggtttcaact 1267 0.311868362551186 2.1 21 10 27 10 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 1268 0.311868362551186 0.333333333333333 4 12 5 13 NM_172691 refGene chr4 42317899 - 92612 graph_last l 68 126 taataaagtg 1269 0.311868362551186 0.333333333333333 4 12 5 13 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 1270 0.311868362551186 0.333333333333333 4 12 5 13 NM_023603 refGene chr4 125949966 - 97273 graph_last l 40 132 ttgtgtgctg 1271 0.311868362551186 2.1 21 10 27 10 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 1272 0.311920047277057 1.9375 31 16 39 17 atttttcttt 1273 0.316888221597827 0.45 9 20 11 21 ccctcaccca 1274 0.316888221597827 0.45 9 20 11 21 NM_133348 refGene chr4 150384877 + 99558 graph_last l 102 304 gacaccagag 1275 0.316888221597827 0.45 9 20 11 21 NM_007756 refGene chr5 107494346 + 105667 graph_last l 178 537 tcagaggcct 1276 0.316888221597827 0.45 9 20 11 21 NM_176841 refGene chr11 29406550 + 18533 graph_last l 7 262 tgttggtacg 1277 0.316888221597827 0.45 9 20 11 21 cccttcttct 1278 0.317689570921060 0.787096774193548 122 155 153 162 gccaagggtc 1279 0.32227561271544 1.40350877192982 80 57 101 59 gttgctgaga 1280 0.323875402463996 1.29203539823009 146 113 183 118 ctttctcaaa 1281 0.325995015667615 0.411764705882353 7 17 9 18 gttgtctttg 1282 0.325995015667615 0.411764705882353 7 17 9 18 aaaactctgc 1283 0.327416563107499 Inf 5 0 6 0 aaagaagaaa 1284 0.327416563107499 Inf 5 0 6 0 NM_182990 refGene chr2 85411947 + 76355 graph_last l 9 24 aaagagtatg 1285 0.327416563107499 Inf 5 0 6 0 NM_019771 refGene chr2 144011101 + 79829 graph_last 1 11 aaagttcgga 1286 0.327416563107499 Inf 5 0 6 0 aaatccccaa 1287 0.327416563107499 Inf 5 0 6 0 aaattccttt 1288 0.327416563107499 Inf 5 0 6 0 AK030904 knownGene chr5 123271466 + 106963 graph_last 9 21 aactaggaag 1289 0.327416563107499 Inf 5 0 6 0 aagatgcatt 1290 0.327416563107499 Inf 5 0 6 0 NM_023773 refGene chr14 47792880 + 41490 graph_last 13 43 aagtgcgagg 1291 0.327416563107499 Inf 5 0 6 0 aatgaggcca 1292 0.327416563107499 Inf 5 0 6 0 NM_012053 refGene chr15 78132801 + 48155 graph_last 6 12 accctggccg 1293 0.327416563107499 Inf 5 0 6 0 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 1294 0.327416563107499 Inf 5 0 6 0 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 1295 0.327416563107499 Inf 5 0 6 0 NM_007933 refGene chr11 70224063 - 21160 graph_last 1 13 actgccaaga 1296 0.327416563107499 Inf 5 0 6 0 NM_007697 refGene chr6 105396974 + 115725 graph_last l 6 33 agaacaacac 1297 0.327416563107499 Inf 5 0 6 0 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 1298 0.327416563107499 Inf 5 0 6 0 agccaaacaa 1299 0.327416563107499 Inf 5 0 6 0 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 1300 0.327416563107499 Inf 5 0 6 0 NM_024196 refGene chr2 153056636 + 80355 graph_last l 8 26 agctcagggt 1301 0.327416563107499 Inf 5 0 6 0 agctctgggg 1302 0.327416563107499 Inf 5 0 6 0 AA591962 all_est chr18 77484755 - 66217 graph_last l 3 15 agtgcctttg 1303 0.327416563107499 Inf 5 0 6 0 agttaatgaa 1304 0.327416563107499 Inf 5 0 6 0 agttcaaggc 1305 0.327416563107499 Inf 5 0 6 0 ataaaacata 1306 0.327416563107499 Inf 5 0 6 0 NM_010312 refGene chr5_random 31028043 - 109596 graph_last 3 10 ataaccgtgt 1307 0.327416563107499 Inf 5 0 6 0 atcggttcca 1308 0.327416563107499 2.8 14 5 17 5 NM_010223 refGene chr8 70775594 + 130947 graph_last 0 93 atgccccgcg 1309 0.327416563107499 Inf 5 0 6 0 caaaagaaag 1310 0.327416563107499 Inf 5 0 6 0 caaatcagaa 1311 0.327416563107499 Inf 5 0 6 0 caagctgcaa 1312 0.327416563107499 Inf 5 0 6 0 genomic chr6 32020922 - 0 unique_long l 9 23 caagcttacc 1313 0.327416563107499 Inf 5 0 6 0 cagggcaggg 1314 0.327416563107499 Inf 5 0 6 0 NM_145836 refGene chr12 83111127 - 29976 graph_last 5 33 cagggcgaaa 1315 0.327416563107499 Inf 5 0 6 0 NM_177296 refGene chr6 29392712 - 111132 graph_last 19 58 caggttgaca 1316 0.327416563107499 Inf 5 0 6 0 genomic chr12 103766563 + 0 unique_long l 6 46 cattttgttt 1317 0.327416563107499 Inf 5 0 6 0 cccaaggaga 1318 0.327416563107499 2.8 14 5 18 5 NM_145979 refGene chr6 127048350 + 116948 graph_second s 1 12 cccgaactgg 1319 0.327416563107499 Inf 5 0 6 0 genomic chr11 19653265 + 0 unique_short s 0 7 cccgtgagcg 1320 0.327416563107499 Inf 5 0 6 0 ccctcctcag 1321 0.327416563107499 Inf 5 0 6 0 ccgggtggtg 1322 0.327416563107499 Inf 5 0 6 0 NM_012053 refGene chr15 78133107 + 48155 graph_second l 3 13 cctgagggta 1323 0.327416563107499 Inf 5 0 6 0 cctggctcca 1324 0.327416563107499 Inf 5 0 6 0 cgaccccggg 1325 0.327416563107499 Inf 5 0 6 0 W66880 all_est chr10 119616347 + 16047 graph_last 2 13 cgctttgcca 1326 0.327416563107499 Inf 5 0 6 0 cggatcctga 1327 0.327416563107499 Inf 5 0 6 0 NM_138749 refGene chr15 90824776 - 49240 graph_last l 11 31 cgggacccca 1328 0.327416563107499 Inf 5 0 6 0 cgggttgtct 1329 0.327416563107499 Inf 5 0 6 0 NM_138670 refGene chr15 79758143 + 48320 graph_last l 5 20 cgtgcccagc 1330 0.327416563107499 Inf 5 0 6 0 NM_021513 refGene chr8 107381711 + 133021 graph_last l 14 33 ctacccggtt 1331 0.327416563107499 Inf 5 0 6 0 NM_011882 refGene chr1 157213774 + 7344 graph_second 0 8 ctccgtggtg 1332 0.327416563107499 Inf 5 0 6 0 ctgcccagcg 1333 0.327416563107499 Inf 5 0 6 0 ctgctatccg 1334 0.327416563107499 1.46938775510204 72 49 90 51 NM_010308 refGene chr8 95243976 + 132442 graph_last l 4 25 gacagcagcc 1335 0.327416563107499 Inf 5 0 6 0 NM_031408 refGene chr5_random 31025212 + 109595 graph_last l 13 32 gacccttggg 1336 0.327416563107499 Inf 5 0 6 0 NM_008891 refGene chr12 54446464 + 28226 graph_last 0 14 gatgagaagg 1337 0.327416563107499 Inf 5 0 6 0 NM_011308 refGene chr11 61888988 - 20613 graph_last l 3 22 gatgaggaag 1338 0.327416563107499 Inf 5 0 6 0 NM_008791 refGene chr16 98535719 + 56369 graph_last l 36 102 gatgcaccag 1339 0.327416563107499 Inf 5 0 6 0 AK012088 knownGene chr1 80478595 + 3826 graph_last l 4 17 gatgccgaat 1340 0.327416563107499 Inf 5 0 6 0 NM_028131 refGene chr8 118637476 + 133783 graph_last l 3 13 gcacactgaa 1341 0.327416563107499 Inf 5 0 6 0 NM_028720 refGene chr16 4575135 + 51161 graph_last l 9 26 gccagggaga 1342 0.327416563107499 Inf 5 0 6 0 NM_018818 refGene chrX 102814857 - 150883 graph_last 2 14 gcccagcgta 1343 0.327416563107499 Inf 5 0 6 0 NM_133347 refGene chr9 112684661 - 141524 graph_last l 10 42 gccgtcaagt 1344 0.327416563107499 Inf 5 0 6 0 X06453 knownGene chr11 120113367 - 25581 graph_last l 27 118 gcctgtggcc 1345 0.327416563107499 2.8 14 5 17 5 NM_145975 refGene chr13 55450172 + 35193 graph_last l 5 15 gctgcacccg 1346 0.327416563107499 Inf 5 0 6 0 gctgccacca 1347 0.327416563107499 Inf 5 0 6 0 gcttgcccta 1348 0.327416563107499 Inf 5 0 6 0 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 1349 0.327416563107499 0.478260869565217 11 23 14 24 NM_009739 refGene chr7 120051938 + 125271 graph_last 12 29 gctttggctt 1350 0.327416563107499 Inf 5 0 6 0 gggcggagct 1351 0.327416563107499 2.8 14 5 18 5 NM_153516 refGene chr6 122593815 + 116702 graph_last l 12 30 gggggaagca 1352 0.327416563107499 Inf 5 0 6 0 NM_026664 refGene chr11 75792879 - 21685 graph_last 4 40 ggggtgcacg 1353 0.327416563107499 Inf 5 0 6 0 NM_175751 refGene chr18 55359822 - 65007 graph_last 2 13 gggttgccag 1354 0.327416563107499 Inf 5 0 6 0 NM_008802 refGene chr3 19156314 - 83355 graph_last l 10 22 ggtacaggat 1355 0.327416563107499 Inf 5 0 6 0 NM_022723 refGene chr15 85272968 - 48898 graph_last 1 9 ggtccacaag 1356 0.327416563107499 Inf 5 0 6 0 AK010983 knownGene chr8 71205650 - 131015 graph_last 14 20 ggtgcccgac 1357 0.327416563107499 Inf 5 0 6 0 BC021509 knownGene chr5 129831781 + 107354 graph_last l 4 12 ggttgctgcg 1358 0.327416563107499 Inf 5 0 6 0 NM_011906 refGene chr6 90336408 - 114844 graph_last 2 18 ggtttcttcc 1359 0.327416563107499 Inf 5 0 6 0 gtactggcca 1360 0.327416563107499 Inf 5 0 6 0 NM_173419 refGene chr14 53523431 + 41872 graph_last 2 15 gtctgatctc 1361 0.327416563107499 Inf 5 0 6 0 NM_145596 refGene chr8 70108965 - 130866 graph_last 1 29 gtgaaaggca 1362 0.327416563107499 Inf 5 0 6 0 NM_145979 refGene chr6 127028413 + 116948 graph_last l 5 16 gtgacagcta 1363 0.327416563107499 Inf 5 0 6 0 BG655581 all_est chrUn_random 789383 - 142568 graph_last 0 6 gtgattttgt 1364 0.327416563107499 Inf 5 0 6 0 gtgcacaggc 1365 0.327416563107499 Inf 5 0 6 0 gtggagcacg 1366 0.327416563107499 Inf 5 0 6 0 NM_010731 refGene chr10 83522601 + 14167 graph_second l 29 88 gtgggatcga 1367 0.327416563107499 Inf 5 0 6 0 gtggggagcc 1368 0.327416563107499 2.8 14 5 17 5 gtggtccata 1369 0.327416563107499 Inf 5 0 6 0 gtggttcaca 1370 0.327416563107499 2.8 14 5 17 5 genomic chr3 90372519 + 0 unique_long l 6 16 gttgtctctt 1371 0.327416563107499 Inf 5 0 6 0 NM_027920 refGene chr6 118040263 + 116344 graph_last l 9 27 taactggtgc 1372 0.327416563107499 Inf 5 0 6 0 NM_023670 refGene chr6 49718491 - 112602 graph_last l 10 23 tacaatgcct 1373 0.327416563107499 Inf 5 0 6 0 genomic chr2 23371623 + 0 unique_long l 4 22 tatgcccatt 1374 0.327416563107499 Inf 5 0 6 0 AK048615 knownGene chr10 120386445 - 16111 graph_last l 3 9 tatgtaattc 1375 0.327416563107499 Inf 5 0 6 0 tcctgaacag 1376 0.327416563107499 Inf 5 0 6 0 tctcgaaaaa 1377 0.327416563107499 Inf 5 0 6 0 tctgccctag 1378 0.327416563107499 Inf 5 0 6 0 tctgctggtg 1379 0.327416563107499 Inf 5 0 6 0 NM_172903 refGene chr7 72766275 - 122423 graph_last l 17 50 tcttggtgac 1380 0.327416563107499 Inf 5 0 6 0 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 1381 0.327416563107499 0.478260869565217 11 23