gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count gtggctcaca 1 1.82813620241459e-64 2.25 1179 524 1540 580 tgtagtgtaa 2 1.12750737692436e-48 0.233243967828418 87 373 114 413 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 3 1.54975669898644e-40 3.96551724137931 345 87 451 96 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 4 3.08954760570864e-28 0.0677966101694915 8 118 11 130 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 5 9.11839545973314e-23 18.6 93 5 122 5 NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 6 1.1511252329164e-22 1.54084158415842 1245 808 1626 894 ggtgagcctg 7 2.30284728053942e-22 22 88 4 115 4 tctggacgcg 8 3.10498340954689e-22 Inf 71 0 93 0 tgggttgtct 9 1.12596336939049e-21 0.542768273716952 349 643 456 711 gaatgatctg 10 5.14101439094987e-20 0.0294117647058824 2 68 2 75 aagatcaaga 11 6.96240476712105e-19 3.74468085106383 176 47 230 52 gcctaatgta 12 1.05127551008942e-17 0.400735294117647 109 272 142 301 tggatcagtc 13 9.65577108503503e-16 0.4625 148 320 193 354 ctagtctttg 14 6.20455890645091e-14 0.508379888268156 182 358 238 396 gtgctgaata 15 6.20455890645091e-14 Inf 47 0 61 0 tcttaatgaa 16 2.55086122522706e-13 0.195652173913043 18 92 23 102 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 17 2.48390078780921e-12 0.164556962025316 13 79 17 87 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 18 4.05489003298769e-12 8.5 68 8 89 9 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 19 4.10727947419319e-12 0.369047619047619 62 168 81 186 cctttaatcc 20 1.01308146300546e-11 3.02083333333333 145 48 189 53 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 21 1.98761078852308e-11 0.147058823529412 10 68 13 75 gtaagcataa 22 3.10313156789136e-11 0.430693069306931 87 202 113 223 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 23 2.76581896781245e-10 0.292452830188679 31 106 40 117 gaggctttgc 24 3.96247805402714e-10 10.2 51 5 67 5 gtgaaactaa 25 9.29535671461241e-10 0.507874015748031 129 254 168 281 gccgttctta 26 1.02985330438284e-09 0.0526315789473684 2 38 2 42 gaataataaa 27 2.03746627293015e-09 0.508064516129032 126 248 165 274 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 28 2.70926316633983e-09 0.303030303030303 30 99 39 110 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 29 3.19431013159002e-09 0.333333333333333 38 114 50 126 ccctgggttc 30 3.19431013159002e-09 2.64150943396226 140 53 183 59 ccttgctcaa 31 4.02510601252766e-09 0.211267605633803 15 71 20 79 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 32 4.02510601252766e-09 0.282608695652174 26 92 34 102 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 33 4.02510601252766e-09 0.258823529411765 22 85 29 94 tctgctaaag 34 4.02510601252766e-09 20 40 2 52 2 attttcagtt 35 4.26446819312012e-09 14 42 3 55 3 tagagactgc 36 4.26446819312012e-09 14 42 3 55 3 tatttgcaaa 37 4.62093618961076e-09 9.4 47 5 62 5 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 38 4.62093618961076e-09 11 44 4 58 4 cccacaagct 39 5.05250518758347e-09 Inf 31 0 41 0 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 40 5.26331662437803e-09 0.208955223880597 14 67 18 74 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 41 6.29371685691936e-09 0.157894736842105 9 57 12 63 ggcttcggtc 42 7.43251321657272e-09 0.603174603174603 228 378 298 418 atgtctcaaa 43 8.085492119436e-09 0.551601423487544 155 281 202 311 tgataaaagt 44 3.95327205740037e-08 0.113636363636364 5 44 7 49 tgtataaaaa 45 3.95327205740037e-08 0.326530612244898 32 98 42 108 gaagtcggaa 46 5.17674878343802e-08 0 0 26 0 29 tggctcggtc 47 5.19916919735898e-08 2.03030303030303 201 99 262 110 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 48 6.3657242287956e-08 12.6666666666667 38 3 50 3 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 49 1.02623997673765e-07 3.29629629629630 89 27 116 30 agagtaatca 50 1.06377529151668e-07 0.2 11 55 14 61 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 51 1.89033741702731e-07 0.125 5 40 6 44 tgtactcaat 52 2.27988828084019e-07 0.521739130434783 108 207 141 229 aataaactgc 53 2.30724759577357e-07 0.170212765957447 8 47 10 52 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 54 2.31907917068297e-07 1.86776859504132 226 121 295 134 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 55 3.00814766982410e-07 4.75 57 12 75 13 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 56 3.23971542702721e-07 3.57142857142857 75 21 98 23 attctccagt 57 3.39878711048870e-07 0.505263157894737 96 190 126 210 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 58 4.27741473273761e-07 0 0 24 0 26 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 59 4.80092263973231e-07 0.703448275862069 408 580 533 642 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 60 5.29845469133238e-07 4.42857142857143 62 14 81 16 ctaataaagc 61 9.20547028846803e-07 0.5 87 174 114 192 gtgaccgaag 62 1.18741478709812e-06 4.38461538461539 57 13 74 14 acatcataga 63 2.13149563717848e-06 0.372340425531915 35 94 46 104 tactcattat 64 2.13149563717848e-06 0.204081632653061 10 49 13 54 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 65 2.15229120477958e-06 0.215686274509804 11 51 14 56 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 66 2.20513710445386e-06 0.117647058823529 4 34 5 38 NM_013874 refGene chr7 23389583 + 119824 graph_last l 36 114 gcggagcccc 67 2.42527058243867e-06 15 30 2 39 2 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 68 2.76908168647122e-06 4.41666666666667 53 12 69 13 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 69 2.79110356491478e-06 0.333333333333333 26 78 34 86 aaataaaaca 70 3.08811742287672e-06 0.0740740740740741 2 27 2 30 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 71 3.89485567720383e-06 1.65454545454545 273 165 357 183 gtgggcgtgt 72 4.39395737675221e-06 2.28846153846154 119 52 156 58 ctcaataaat 73 5.07361325387493e-06 0.0416666666666667 1 24 1 26 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 74 5.07361325387493e-06 0.0416666666666667 1 24 1 26 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 75 5.1003085485434e-06 Inf 22 0 29 0 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 76 5.96351037714156e-06 25 25 1 33 1 taaaagaaaa 77 6.36346644484007e-06 0.285714285714286 18 63 24 70 tcaaacttgg 78 6.36346644484007e-06 0.477611940298507 64 134 83 148 gggaagtctg 79 6.90469114806516e-06 0.157894736842105 6 38 8 42 BC052699 knownGene chr6 126842831 - 116923 graph_last l 137 519 aacccctgcc 80 7.76779508264726e-06 2.62857142857143 92 35 120 39 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 81 8.8946636869047e-06 Inf 21 0 28 0 ggggctcaca 82 8.8946636869047e-06 Inf 21 0 28 0 gagacagtga 83 9.52451207597937e-06 0.0434782608695652 1 23 1 25 taataaataa 84 1.17928839349487e-05 0.162162162162162 6 37 8 41 aaaagaggaa 85 1.63971351238496e-05 Inf 21 0 27 0 aacaggttca 86 1.68552200863889e-05 0.406593406593407 37 91 48 101 NM_008634 refGene chr13 97881760 - 37324 graph_last 35 132 aaaccagagc 87 1.72486277181708e-05 24 24 1 31 1 agaggtgtag 88 1.96222231590369e-05 0.0833333333333333 2 24 2 27 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 89 1.96222231590369e-05 0.470588235294118 56 119 73 132 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 90 1.99281194985188e-05 13.5 27 2 35 2 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 91 2.52393130220076e-05 0.554945054945055 101 182 132 201 NM_198886 refGene chr17 34557187 + 58892 graph_last 1 33 cctcaaagag 92 2.91554328943373e-05 23 23 1 30 1 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 93 2.91554328943373e-05 0.107142857142857 3 28 4 31 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 94 2.91554328943373e-05 0 0 18 0 20 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 95 2.91554328943373e-05 0.107142857142857 3 28 4 31 gtaaaaaaaa 96 3.15184798220091e-05 0.4 34 85 44 94 NM_031179 refGene chr1 56302543 - 2445 graph_last l 29 113 caaactgaag 97 3.37745619326646e-05 13 26 2 34 2 tagatatagg 98 4.54591390089413e-05 0.417582417582418 38 91 50 101 gaggctcaca 99 4.98353406777304e-05 22 22 1 29 1 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 100 4.98353406777304e-05 22 22 1 29 1 taagtggaat 101 5.42376120276773e-05 0.315789473684211 18 57 23 63 gattctccga 102 5.74882566169032e-05 0 0 17 0 19 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 103 5.97253830470094e-05 0.358208955223881 24 67 31 74 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 104 6.12995171090557e-05 0.309090909090909 17 55 22 61 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 105 6.82641079607583e-05 0.4375 42 96 55 106 gtggcacaca 106 9.0601182338684e-05 9 27 3 35 3 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 107 9.16063130951145e-05 2.62068965517241 76 29 99 32 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 108 9.50345993144306e-05 0.115384615384615 3 26 4 29 ttataatata 109 9.521053612188e-05 0.2 7 35 9 39 NM_010487 refGene chr9 22639791 - 135759 graph_last l 26 97 ggatggctta 110 9.91243433199478e-05 12 24 2 32 2 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 111 9.91243433199478e-05 0.534722222222222 77 144 100 159 ttggaacaat 112 0.000114278376309545 0 0 16 0 18 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 113 0.000135608297318426 5.66666666666667 34 6 45 7 tgtgttgtgt 114 0.000136503768070568 0.476190476190476 50 105 65 116 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 115 0.000160264988441753 0.307692307692308 16 52 21 58 gatgacacca 116 0.000168235038144464 2.23255813953488 96 43 125 48 caaaatacat 117 0.000180015070753681 0.338983050847458 20 59 26 65 ggtcagtcgg 118 0.000200147069221179 0.0833333333333333 2 24 3 26 agaaggaggt 119 0.000200219059691404 0.639344262295082 156 244 204 270 tgaaaaaaaa 120 0.000204746488410452 0.365079365079365 23 63 30 70 tggttgctgg 121 0.000205778371615416 1.83544303797468 145 79 189 87 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 122 0.000228868209619712 0.543478260869565 75 138 98 153 ctgagcaaca 123 0.000246859980952637 20 20 1 26 1 gcagagtgcg 124 0.000246859980952637 3.17647058823529 54 17 70 19 gctttgaatg 125 0.000247387072074212 0.443181818181818 39 88 51 97 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 126 0.000251400077271659 0.0555555555555556 1 18 1 20 gactatatat 127 0.000251400077271659 0.212121212121212 7 33 9 37 NM_011185 refGene chr17 15128563 - 57300 graph_last l 175 362 cgggtcatat 128 0.000291195067333839 0.3125 15 48 19 53 agaaataaat 129 0.000327344292726670 0.153846153846154 4 26 5 29 tgtaacagga 130 0.000330912203266658 0.490566037735849 52 106 68 117 gtaagcaaaa 131 0.000341081553305959 0.563758389261745 84 149 110 165 gcctccaagg 132 0.000368022199488188 1.69696969696970 168 99 220 109 taaatcaact 133 0.000423857467805358 0.1875 6 32 8 35 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 134 0.000423857467805358 0.1875 6 32 8 35 ctacgttctc 135 0.000438630874973061 0.319148936170213 15 47 19 52 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 136 0.000562884108847251 3.9 39 10 51 11 NM_144915 refGene chr5 142286412 + 108317 graph_last l 263 516 tatgaattaa 137 0.000585581903293357 0.3125 15 48 20 53 ctgccccaca 138 0.00073788866814077 18 18 1 24 1 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 139 0.000791475044865677 0.282051282051282 11 39 14 43 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 140 0.000791475044865677 10.5 21 2 27 2 gaagcaaaga 141 0.000791475044865677 0.363636363636364 20 55 26 61 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 142 0.00083187813288297 2.625 63 24 82 27 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 143 0.000853683951593614 0.125 3 24 4 26 NM_007552 refGene chr2 18792200 + 72377 graph_last 0 60 cattcaaaaa 144 0.000917419724992504 0 0 14 0 15 ttaaataaat 145 0.000917419724992504 0 0 14 0 15 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 146 0.00097661674997092 0.235294117647059 8 34 11 38 tcaataaagc 147 0.00100579987947422 0.333333333333333 15 45 19 50 aggcagacag 148 0.00102028293083740 1.35331230283912 429 317 560 351 NM_018871 refGene chr5 134736729 - 107744 graph_last l 168 546 aatgtgagtc 149 0.00104071170170556 0.415384615384615 27 65 35 72 ttcattattg 150 0.00105690214974752 0.275 11 40 15 44 NM_178880 refGene chr16 93083526 + 56030 graph_last l 24 166 gcggccgaca 151 0.00107695596832571 7.66666666666667 23 3 30 3 tgaggatgaa 152 0.00107695596832571 0.0952380952380952 2 21 3 23 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 153 0.00108004969411819 0.225806451612903 7 31 9 34 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 154 0.00108004969411819 0.333333333333333 16 48 21 53 NM_011885 refGene chr7 22543696 - 119747 graph_last l 49 216 tgctgggatg 155 0.00108004969411819 0.2 6 30 8 33 cctacagtcc 156 0.00112530908981989 5.8 29 5 38 6 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 157 0.00112644255768056 0.325581395348837 14 43 18 48 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 158 0.00118326590373367 0.455696202531646 36 79 47 87 NM_009440 refGene chrX 93368218 - 150509 graph_last l 22 55 ctatgtgttg 159 0.00122817462311905 10 20 2 26 2 CF929608 all_est chr12 51042570 + 28064 graph_last 3 55 aattcaatta 160 0.00136670733527833 0.111111111111111 2 18 2 20 caacaaaacc 161 0.00136670733527833 0.111111111111111 2 18 2 20 ttgactttat 162 0.00140177189608688 0.454545454545455 35 77 46 85 NM_177301 refGene chr3 93009576 - 86949 graph_last 70 267 ggcagcacaa 163 0.00151893713974150 3.23076923076923 42 13 55 14 ccaacactga 164 0.00154671184010599 5.2 26 5 34 5 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 165 0.00161846839636878 Inf 14 0 18 0 BC049678 knownGene chr8 71178447 - 131010 graph_last l 24 83 cggctgtcgc 166 0.00161846839636878 Inf 14 0 18 0 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 167 0.00173454479337226 5.6 28 5 37 6 gcccccctct 168 0.00173454479337226 5.6 28 5 37 6 tgaaataaac 169 0.00173454479337226 0.452054794520548 33 73 43 81 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 170 0.00174374634454134 2.83333333333333 51 18 66 20 NM_021273 refGene chr12 107236798 - 31356 graph_last 21 68 ccggcccaga 171 0.00197444859818126 9.5 19 2 25 2 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 172 0.00197444859818126 17 17 1 22 1 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 173 0.00197444859818126 17 17 1 22 1 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 174 0.00197444859818126 17 17 1 22 1 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 175 0.00215287934437685 0.384615384615385 20 52 26 58 gtagtggaag 176 0.00223372714742688 0.242424242424242 8 33 11 36 NM_009955 refGene chr14 58531839 - 42295 graph_last l 66 213 tgtgtagcca 177 0.00223372714742688 0.242424242424242 8 33 11 36 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 178 0.00244435365824744 0.117647058823529 2 17 2 19 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 179 0.00245422458519549 0.258064516129032 8 31 10 34 cgccgccggc 180 0.00248798180406184 1.54838709677419 192 124 251 137 acccgccggg 181 0.00266649789329251 0.173913043478261 4 23 5 25 NM_145422 refGene chr10 88338778 - 14527 graph_last l 50 161 ctattaaata 182 0.00266649789329251 0.192307692307692 5 26 7 29 NM_024218 refGene chr16 56401884 + 54408 graph_last 37 280 aaggtcgagc 183 0.00267451654550596 3.77777777777778 34 9 45 10 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 184 0.00267451654550596 4.83333333333333 29 6 38 7 tacaacactc 185 0.00267451654550596 3.77777777777778 34 9 45 10 aggtgctgag 186 0.00267928300696229 Inf 13 0 17 0 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 187 0.00267928300696229 0.609271523178808 92 151 120 167 cacaaaataa 188 0.0028823493036051 0.0666666666666667 1 15 1 17 NM_019402 refGene chr14 45986663 + 41330 graph_last 48 272 gtattcccct 189 0.00307820163731937 2.41666666666667 58 24 76 26 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 190 0.00307820163731937 0.410714285714286 23 56 30 62 ttatgaaatg 191 0.00307888064858312 0.272727272727273 9 33 12 37 agagacacca 192 0.00313689525764478 5.75 23 4 30 4 gttattgatg 193 0.00313689525764478 9 18 2 24 2 aaaatgttgt 194 0.00326692076164775 0 0 12 0 13 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 195 0.00349275262717857 0.38 19 50 25 55 caaaaataaa 196 0.00354764659395957 0.421052631578947 24 57 31 63 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 197 0.00354764659395957 0.421052631578947 24 57 31 63 tgtatgtctt 198 0.00372662318621034 0.266666666666667 8 30 10 33 gtggcgcacg 199 0.00391637913428223 2.92857142857143 41 14 54 15 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 200 0.00397738908314819 4.28571428571429 30 7 39 8 atccggcgcc 201 0.00399025025244723 4.66666666666667 28 6 37 7 NM_015819 refGene chrX 42688995 - 148431 graph_last l 19 54 taaatcccac 202 0.00424451062301313 0.125 2 16 2 18 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 203 0.00433864257761272 0.315789473684211 12 38 16 42 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 204 0.00435863639565293 2.16129032258065 67 31 88 34 BC021509 knownGene chr5 129833260 - 107354 graph_last 1 33 attacagcca 205 0.00455955709573348 Inf 12 0 16 0 tgtgaagtag 206 0.0046343197994703 0.272727272727273 9 33 12 36 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 207 0.00487703598135191 0.341463414634146 14 41 18 45 agagctgtgg 208 0.00503100116530267 9 18 2 23 2 ggcccccaca 209 0.00503100116530267 9 18 2 23 2 ggcgcggacc 210 0.00503100116530267 9 18 2 23 2 NM_010064 refGene chr2 71555694 + 75596 graph_last l 5 69 tcggacaaaa 211 0.00503100116530267 9 18 2 23 2 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 212 0.00520350483981678 0.111111111111111 2 18 3 20 NM_144530 refGene chr1 136498115 - 6343 graph_last 18 55 tctgagacag 213 0.00543986761829427 15 15 1 20 1 NM_013685 refGene chr18 70038556 + 65838 graph_last l 50 154 gtcagatttt 214 0.00564465684701564 3.55555555555556 32 9 42 10 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 215 0.00573393784164833 0.275862068965517 8 29 10 32 gaggagggtg 216 0.00602451801756397 4.66666666666667 28 6 36 7 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 217 0.00615068783948588 0.15 3 20 4 22 cgggagatgc 218 0.00623571530393194 0.536842105263158 51 95 67 105 ggctttggtc 219 0.0062864733685764 0 0 11 0 12 NM_009308 refGene chr18 31774869 - 63593 graph_last l 13 28 ttgaatacag 220 0.0062864733685764 0 0 11 0 12 tgtatttata 221 0.00629293898447498 0.230769230769231 6 26 8 29 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 222 0.00680247326302315 6.33333333333333 19 3 25 3 tccctggcat 223 0.00682926065169823 0.217391304347826 5 23 6 25 NM_024456 refGene chr11 100379176 - 23873 graph_last l 76 292 taaccaatca 224 0.00688850636774291 0.28125 9 32 12 35 gaggagaaga 225 0.00714925253418842 0.5125 41 80 54 89 gtgtctcaca 226 0.00744505285617753 0.133333333333333 2 15 2 17 NM_016884 refGene chr14 43945073 - 41160 graph_last 4 27 aattcccgtg 227 0.00746893190549046 Inf 11 0 15 0 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 228 0.00746893190549046 0.428571428571429 24 56 32 62 genomic chr2 116134387 - 0 unique_long l 7 31 caaagatcct 229 0.00746893190549046 Inf 11 0 15 0 ccagtgcaga 230 0.00746893190549046 Inf 11 0 15 0 NM_173363 refGene chr12 107106677 + 31339 graph_last 13 63 cttgacacac 231 0.00746893190549046 Inf 11 0 15 0 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 232 0.00746893190549046 0.428571428571429 24 56 32 62 gctgcctaga 233 0.00746893190549046 Inf 11 0 15 0 NM_008054 refGene chr10 40732120 + 11702 graph_last l 10 56 tgactctgaa 234 0.00746893190549046 Inf 11 0 15 0 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 235 0.00787905518354144 0.459016393442623 28 61 37 68 gtggtgcaca 236 0.00789802474506462 8.5 17 2 22 2 atggctcaca 237 0.0085244618010341 4.8 24 5 32 6 attaagaggg 238 0.0085244618010341 0.117647058823529 2 17 3 19 NM_015753 refGene chr2 45292287 - 74261 graph_last l 13 58 cacgtgcctg 239 0.0085244618010341 15 15 1 19 1 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 240 0.0085244618010341 0.117647058823529 2 17 3 19 NM_009980 refGene chr7 124868336 - 125551 graph_last l 7 35 gctctaccag 241 0.0085244618010341 15 15 1 19 1 NM_010480 refGene chr12 106260821 - 31241 graph_last 20 90 gcttagaagt 242 0.0085244618010341 15 15 1 19 1 ggcagccccc 243 0.0085244618010341 15 15 1 19 1 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 244 0.0085244618010341 0.0714285714285714 1 14 1 15 taagggaaat 245 0.0085244618010341 0.365853658536585 15 41 19 45 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 246 0.0085244618010341 0.117647058823529 2 17 3 19 NM_175229 refGene chr17 23399125 + 57745 graph_last l 32 111 ttgctggaaa 247 0.0085244618010341 15 15 1 19 1 AI840093 all_est chr7 15829747 + 119220 graph_last l 5 36 ttggtgagtg 248 0.0085244618010341 15 15 1 19 1 NM_011801 refGene chr8 113461104 - 133515 graph_last l 25 71 tttccagcaa 249 0.0085244618010341 0.0714285714285714 1 14 1 15 ttttctattt 250 0.0085244618010341 0.0714285714285714 1 14 1 15 atctgtactc 251 0.00864836978741268 0.303030303030303 10 33 13 36 cctgatcttt 252 0.00879335292032162 1.91111111111111 86 45 112 50 NM_009920 refGene chr19 4914237 - 67497 graph_last l 46 301 ggggcagccc 253 0.00900425528242684 2.92857142857143 41 14 53 16 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 254 0.00921378459117104 0.24 6 25 8 28 gccttccaat 255 0.00925731201050706 0.62043795620438 85 137 111 151 taaataaaga 256 0.00941751213103007 0.157894736842105 3 19 4 21 gactgtgcca 257 0.0103515313037020 3.3 33 10 43 11 tcctcacggg 258 0.0103747525540650 0.227272727272727 5 22 6 24 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 259 0.0104396423227925 0.190476190476190 4 21 5 23 NM_008138 refGene chr9 110247498 - 141261 graph_last l 20 144 cagagatccc 260 0.0113485069366548 5.25 21 4 27 4 NM_181734 refGene chr2 164232953 + 81207 graph_last l 2 37 actgggtctc 261 0.0114768199499401 0 0 10 0 11 gctataataa 262 0.0114768199499401 0.333333333333333 11 33 14 37 NM_025402 refGene chr11 120775513 + 25666 graph_last l 37 68 tagagcttta 263 0.0114768199499401 0 0 10 0 11 NM_010487 refGene chr9 22638223 - 135759 graph_last l 47 135 ccccacacac 264 0.0118823464271283 4.4 22 5 29 5 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 265 0.0118823464271283 4.4 22 5 29 5 NM_134086 refGene chr15 98545598 + 49712 graph_last l 12 40 aaggatatct 266 0.0120820612589524 Inf 11 0 14 0 NM_009408 refGene chr2 161260208 + 81031 graph_last b 6 31 agcggggacc 267 0.0120820612589524 Inf 11 0 14 0 NM_025638 refGene chr11 86619855 - 22739 graph_last l 10 34 atgcaaacct 268 0.0120820612589524 Inf 11 0 14 0 cagcaatctc 269 0.0120820612589524 Inf 11 0 14 0 NM_019648 refGene chr10 96268892 - 14982 graph_last 13 63 gcgggcgtgg 270 0.0120820612589524 Inf 11 0 14 0 NM_134044 refGene chr12 83501553 + 30013 graph_last 0 49 ttagatattc 271 0.0120820612589524 8 16 2 21 2 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 272 0.0120871192060699 0.142857142857143 2 14 2 16 caaatccaaa 273 0.0124205176688953 4.33333333333333 26 6 34 7 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 274 0.0130678531448364 0.368421052631579 14 38 18 42 cccttcttct 275 0.0132117688894965 0.666666666666667 116 174 152 192 NM_021399 refGene chr12 103477310 - 31002 graph_last l 5 29 ctatggaagg 276 0.0139939168520345 14 14 1 18 1 NM_182716 refGene chr1 135449108 - 6266 graph_last l 16 67 ggggtctgcc 277 0.0139939168520345 14 14 1 18 1 gtcatagctg 278 0.0139939168520345 14 14 1 18 1 tccggcttgt 279 0.0139939168520345 0.125 2 16 3 18 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 280 0.0139939168520345 14 14 1 18 1 NM_009295 refGene chr2 33060457 - 73476 graph_last l 126 428 tggggtttcc 281 0.0141375381665347 0.3 9 30 12 33 aaaataaagg 282 0.0144171251796645 0.333333333333333 11 33 15 37 NM_080556 refGene chr14 115266935 + 44547 graph_last 32 98 gtattggcct 283 0.0144831800626321 0.0769230769230769 1 13 1 14 NM_007920 refGene chr14 71047481 - 43051 graph_last l 15 61 taagaatagc 284 0.0144831800626321 0.0769230769230769 1 13 1 14 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 285 0.0149805445228387 2.73333333333333 41 15 53 17 ggacagatgt 286 0.0151340397367065 6 18 3 23 3 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 287 0.0152177881750136 1.76923076923077 92 52 120 57 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 288 0.0162316345053511 0.238095238095238 5 21 6 23 aacaatttgg 289 0.0164331903061179 0.67816091954023 118 174 154 193 gcaataaatg 290 0.0182472173159275 0.620967741935484 77 124 101 137 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 291 0.0182999825093814 4 24 6 32 7 gccgcagtgg 292 0.0182999825093814 4 24 6 32 7 ctcgagtctc 293 0.019436504019888 2.64285714285714 37 14 48 15 ccattttctg 294 0.0194780052027107 7.5 15 2 20 2 ttaataaaag 295 0.0201022640341310 0.28 7 25 9 28 acagccgtgg 296 0.0202193305613856 Inf 10 0 13 0 NM_009829 refGene chr6 129065716 - 117072 graph_last l 2 16 accaaaacgc 297 0.0202193305613856 Inf 10 0 13 0 gctccagctg 298 0.0202193305613856 Inf 10 0 13 0 gggacctagg 299 0.0202193305613856 2.11111111111111 57 27 75 30 NM_016812 refGene chr8 123874102 + 134083 graph_last l 4 30 gggccatcca 300 0.0202193305613856 Inf 10 0 13 0 NM_009829 refGene chr6 129075403 - 117072 graph_last b 4 22 tacccgccgt 301 0.0202193305613856 Inf 10 0 13 0 NM_144921 refGene chr7 19693527 - 119495 graph_last 31 49 taccctctca 302 0.0202193305613856 Inf 10 0 13 0 NM_173364 refGene chr9 125235525 - 142346 graph_last l 10 39 tgccagtgac 303 0.0202193305613856 Inf 10 0 13 0 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 304 0.0202193305613856 0.492063492063492 31 63 41 70 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 305 0.0207262641603431 0.310344827586207 9 29 12 32 NM_011695 refGene chr14 16734347 + 39565 graph_last 47 123 acaaattatg 306 0.0208101695869662 0.142857142857143 2 14 2 15 ttaattcatt 307 0.0208101695869662 0.142857142857143 2 14 2 15 attgagaaca 308 0.0211109267697281 0 0 9 0 10 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 309 0.0211109267697281 0.25 6 24 8 26 gccaccgtcc 310 0.0211109267697281 0 0 9 0 10 tatgtcagta 311 0.0211109267697281 0 0 9 0 10 tggattcatt 312 0.0211109267697281 0 0 9 0 10 gaagtactat 313 0.021299660886751 3.22222222222222 29 9 38 10 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 314 0.0216632603344107 0.394736842105263 15 38 19 42 aagccttgct 315 0.0224344800557839 3.5 28 8 36 9 NM_023190 refGene chr14 45734984 - 41307 graph_last l 6 39 acaagggact 316 0.0224344800557839 13 13 1 17 1 atggcaattt 317 0.0224344800557839 13 13 1 17 1 NM_023871 refGene chr2 30346412 - 73215 graph_last 18 64 attcaaatcc 318 0.0224344800557839 13 13 1 17 1 NM_199022 refGene chr2 125928783 + 78833 graph_last l 38 101 cattgtggaa 319 0.0224344800557839 13 13 1 17 1 NM_057171 refGene chr17 34807771 + 58931 graph_last l 21 121 cctgccaaga 320 0.0224344800557839 3.5 28 8 36 9 ctctatttaa 321 0.0224344800557839 0.133333333333333 2 15 3 17 NM_008266 refGene chr3 30901904 + 83909 graph_last 81 183 gtaatcctgc 322 0.0224344800557839 0.133333333333333 2 15 3 17 NM_019979 refGene chr14 24510980 + 40008 graph_last l 22 151 tatttagtcc 323 0.0224344800557839 0.227272727272727 5 22 7 24 aggcctggct 324 0.0225410039065699 5.66666666666667 17 3 22 3 ctgtaaatag 325 0.0238916096071667 0.176470588235294 3 17 4 19 NM_029810 refGene chr19 47023591 + 70244 graph_last l 43 140 tagtggcgta 326 0.0242276823663469 3.71428571428571 26 7 34 8 cagactttgt 327 0.0243540546474144 0.0833333333333333 1 12 1 13 NM_020591 refGene chr11 68913687 + 21005 graph_last l 52 114 catctgtggg 328 0.0243540546474144 0.0833333333333333 1 12 1 13 BE649911 all_est chr13 58923938 + 35413 graph_last l 27 89 gaatgtctct 329 0.0243540546474144 0.0833333333333333 1 12 1 13 NM_007421 refGene chr12 108213627 - 31438 graph_last 2 76 taaaattgtt 330 0.0243540546474144 0.25 5 20 6 22 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 331 0.0243540546474144 0.0833333333333333 1 12 1 13 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 332 0.0243540546474144 0.25 5 20 6 22 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 333 0.0243540546474144 0.25 5 20 6 22 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 334 0.0243623095910956 0.388888888888889 14 36 18 40 NM_011650 refGene chr1 120849495 - 5532 graph_last l 16 72 agcattggcg 335 0.0249355659111483 4.75 19 4 25 4 tttttaatgt 336 0.0250898166897396 0.659722222222222 95 144 124 159 NM_010223 refGene chr8 70802228 + 130947 graph_last l 148 335 gggtgcagcc 337 0.0250978423573256 4.2 21 5 27 5 cacgctcccg 338 0.0273772454559840 3 30 10 39 11 tagatcctag 339 0.0280111970842030 0.333333333333333 11 33 15 36 ttattaaaat 340 0.0283491198341376 0.291666666666667 7 24 9 27 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 341 0.0289444660099589 7.5 15 2 19 2 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 342 0.0289444660099589 7.5 15 2 19 2 AF172088 knownGene chr7 110055240 - 124600 graph_last l 23 121 ggatcattct 343 0.0289444660099589 7.5 15 2 19 2 NM_008748 refGene chr7 134139181 - 126141 graph_last l 18 102 gtggaggggc 344 0.0289444660099589 7.5 15 2 19 2 NM_009441 refGene chr16 96222366 + 56249 graph_last l 65 151 tgagaactgc 345 0.0289444660099589 7.5 15 2 19 2 AK029707 knownGene chrX 125528359 - 151570 graph_last 23 61 ttaggcagct 346 0.0289444660099589 7.5 15 2 19 2 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 347 0.0328671022580352 Inf 9 0 12 0 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 348 0.0328671022580352 Inf 9 0 12 0 NM_017380 refGene chr11 116867585 + 25295 graph_last l 12 43 ccctgtggcc 349 0.0328671022580352 Inf 9 0 12 0 NM_175366 refGene chr7_random 13762587 + 126800 graph_last l 4 18 gaagggccag 350 0.0328671022580352 Inf 9 0 12 0 gctgccctaa 351 0.0328671022580352 Inf 9 0 12 0 NM_178662 refGene chr10 83577273 - 14180 graph_last l 10 33 tctgcccgag 352 0.0328671022580352 Inf 9 0 12 0 NM_021278 refGene chrX 155230346 + 152783 graph_last l 30 91 caagttcttt 353 0.034639696226737 0.238095238095238 5 21 7 23 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 354 0.0347164218102600 5.33333333333333 16 3 21 3 BC031915 knownGene chr15 101648680 + 49947 graph_last l 11 43 cctctggtct 355 0.0347659697764108 0.153846153846154 2 13 2 14 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 356 0.0366043397011439 1.86486486486486 69 37 90 41 ctgctgcttc 357 0.0367104843097057 12 12 1 16 1 gaggcttata 358 0.0367104843097057 12 12 1 16 1 tccggggacg 359 0.0367104843097057 12 12 1 16 1 tggtggaatg 360 0.0367104843097057 12 12 1 16 1 actttatcaa 361 0.0369613099653651 0.142857142857143 2 14 3 16 aaggggggca 362 0.0371403551850829 4 20 5 26 5 aagtgctttc 363 0.0371403551850829 0 0 8 0 9 acagggttgg 364 0.0371403551850829 0 0 8 0 9 actataacca 365 0.0371403551850829 0 0 8 0 9 NM_013657 refGene chr5 15677518 + 100681 graph_last l 8 20 agaatttaat 366 0.0371403551850829 0 0 8 0 9 agattattgt 367 0.0371403551850829 0 0 8 0 9 NM_172666 refGene chr2 76323924 + 75908 graph_last 1 24 agcctatgat 368 0.0371403551850829 0 0 8 0 9 NM_009933 refGene chr10 78852173 - 13762 graph_last 0 26 attaaaaata 369 0.0371403551850829 0 0 8 0 9 NM_016792 refGene chr18 63768936 - 65404 graph_last l 103 198 cagttgtaaa 370 0.0371403551850829 0.263157894736842 5 19 6 21 catctagagg 371 0.0371403551850829 0 0 8 0 9 cctttagtcc 372 0.0371403551850829 4 20 5 26 5 cgctaccaaa 373 0.0371403551850829 0 0 8 0 9 NM_011283 refGene chr1 4359714 + 62 graph_last 0 7 cttattcttc 374 0.0371403551850829 0 0 8 0 9 NM_025739 refGene chr4 116180039 - 96508 graph_last 62 192 gattaaaaca 375 0.0371403551850829 0.32 8 25 10 28 NM_173437 refGene chr1 138358972 - 6521 graph_last l 2 51 gcaaggctca 376 0.0371403551850829 4.5 18 4 24 4 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 377 0.0371403551850829 0.222222222222222 4 18 5 20 NM_009308 refGene chr18 31773653 + 63593 graph_last l 23 112 gctacttaag 378 0.0371403551850829 0.263157894736842 5 19 6 21 gctcctgagg 379 0.0371403551850829 0 0 8 0 9 T25556 all_est chr4 126054615 + 97288 graph_last 0 9 ggctaagtag 380 0.0371403551850829 0 0 8 0 9 gtgaatagat 381 0.0371403551850829 0 0 8 0 9 taataaacag 382 0.0371403551850829 0 0 8 0 9 NM_009720 refGene chr11 55071811 - 20087 graph_last l 56 134 taataaagtc 383 0.0371403551850829 0.263157894736842 5 19 6 21 NM_029653 refGene chr13 60545975 + 35479 graph_last l 9 16 ttaccatatc 384 0.0371403551850829 0 0 8 0 9 NM_019710 refGene chrX 139759704 + 152140 graph_last l 15 68 ttagattgtt 385 0.0371403551850829 0.1875 3 16 4 18 NM_011879 refGene chr18 36874885 + 64015 graph_last l 54 121 ttccattaaa 386 0.0371403551850829 0.263157894736842 5 19 6 21 BM964406 all_est chr2 37842889 - 73820 graph_last l 9 47 ttgcatttct 387 0.0371403551850829 0 0 8 0 9 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 388 0.038264534098995 0.393939393939394 13 33 17 37 NM_178923 refGene chr16 91561773 - 55890 graph_last 74 327 cttccccggg 389 0.0393786686841329 3.11111111111111 28 9 36 10 NM_176841 refGene chr11 29406550 + 18533 graph_last l 7 262 tgttggtacg 390 0.0399367818122818 0.291666666666667 7 24 9 26 tttttgatga 391 0.0402619475583574 2.4375 39 16 51 18 NM_017402 refGene chr8 12540613 + 128028 graph_last l 9 25 ctgatagcac 392 0.0403703536161155 0.090909090909091 1 11 1 12 tagacaaagg 393 0.0403703536161155 0.090909090909091 1 11 1 12 NM_172952 refGene chr12 74619208 + 29224 graph_last l 27 82 tggaaatcaa 394 0.0403703536161155 0.090909090909091 1 11 1 12 AK010485 knownGene chr15_random 13961085 + 50719 graph_last 1 27 aattctctgt 395 0.0436853949676064 7 14 2 18 2 gcagctcaca 396 0.0436853949676064 7 14 2 18 2 gctgggcggg 397 0.0436853949676064 7 14 2 18 2 NM_010014 refGene chr4 103601428 + 95607 graph_last l 4 42 gtttttggca 398 0.0436853949676064 7 14 2 18 2 tgcaagctga 399 0.0436853949676064 7 14 2 18 2 ttctgtgtgg 400 0.0436853949676064 7 14 2 18 2 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 401 0.0454976508447601 0.5 28 56 37 62 NM_021554 refGene chr7 113129493 + 124785 graph_last l 60 191 ctaataaacg 402 0.0454976508447601 0.375 12 32 16 35 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 403 0.0454976508447601 0.375 12 32 16 35 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 404 0.0455341253368221 2.81818181818182 31 11 40 12 ataatggata 405 0.0457042317823648 2.53333333333333 38 15 49 17 NM_008946 refGene chr11 70098721 + 21147 graph_last b 35 205 gaacgcgacg 406 0.0501401278396344 3.66666666666667 22 6 29 7 NM_183180 refGene chr2 93817607 + 77024 graph_last l 24 68 gtcactattt 407 0.050334336292763 0.25 5 20 7 22 tagtcaggga 408 0.0512356565685211 0.45 18 40 23 44 NM_010238 refGene chr17 33754051 - 58821 graph_last l 10 48 aacaactggc 409 0.0517082975410155 Inf 8 0 11 0 aagatgaggg 410 0.0517082975410155 Inf 8 0 11 0 BU522569 all_est chr11 68970314 + 21015 graph_last l 12 33 agagcccggc 411 0.0517082975410155 Inf 8 0 11 0 atgtgtgcaa 412 0.0517082975410155 Inf 8 0 11 0 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 413 0.0517082975410155 0.428571428571429 15 35 19 39 catacctgaa 414 0.0517082975410155 0.428571428571429 15 35 19 39 NM_011029 refGene chr9 122505801 + 142160 graph_last 2 12 cgaggtacta 415 0.0517082975410155 Inf 8 0 11 0 NM_133726 refGene chr15 82825573 + 48651 graph_second l 46 85 gccaagtaag 416 0.0517082975410155 Inf 8 0 11 0 AK129143 knownGene chr18 78789794 - 66286 graph_last 1 14 gctcgggagg 417 0.0517082975410155 Inf 8 0 11 0 ggggcacctg 418 0.0517082975410155 Inf 8 0 11 0 NM_175294 refGene chr1 134802952 + 6197 graph_last 10 47 tctcggcctg 419 0.0517082975410155 Inf 8 0 11 0 NM_144530 refGene chr1 136503213 - 6343 graph_last 6 26 tgaagacact 420 0.0517082975410155 Inf 8 0 11 0 tgtgaatgat 421 0.0517082975410155 0.428571428571429 15 35 19 39 NM_008737 refGene chr8 130397400 + 134614 graph_last 1 20 tgttcatact 422 0.0517082975410155 Inf 8 0 11 0 NM_010124 refGene chr10 63316302 - 12862 graph_last l 2 20 ttagtatctg 423 0.0517082975410155 Inf 8 0 11 0 NM_009169 refGene chr6 6285073 - 110133 graph_last 73 165 tttatttcat 424 0.0517082975410155 0.333333333333333 8 24 10 27 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 425 0.0545552612698363 4.5 18 4 23 4 gtggcacacg 426 0.0545552612698363 4.5 18 4 23 4 catctttatg 427 0.0549508380731812 0.166666666666667 2 12 2 13 NM_028177 refGene chr7 114172041 - 124850 graph_last 56 165 gaagacgaat 428 0.0549508380731812 0.166666666666667 2 12 2 13 NM_012032 refGene chr2 164237246 + 81211 graph_second 8 58 gtgaaaaaaa 429 0.0549508380731812 0.166666666666667 2 12 2 13 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 430 0.0549508380731812 0.166666666666667 2 12 2 13 NM_018856 refGene chr4 153937503 + 99814 graph_last l 18 45 tttaatacaa 431 0.0549508380731812 0.166666666666667 2 12 2 13 NM_023526 refGene chr14 13638419 - 39306 graph_last 11 60 tagttaatgt 432 0.0555149696880673 0.235294117647059 4 17 5 19 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 433 0.055540417719419 11 11 1 15 1 ccaagaatct 434 0.055540417719419 11 11 1 15 1 ggaaggatag 435 0.055540417719419 11 11 1 15 1 tacacggagc 436 0.055540417719419 11 11 1 15 1 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 437 0.0557227157504666 0.2 3 15 4 17 NM_025548 refGene chr7 24142854 - 119914 graph_last 20 67 tatgtaggac 438 0.0557227157504666 0.142857142857143 2 14 3 15 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 439 0.0557227157504666 0.2 3 15 4 17 genomic chr3 87878262 + 0 unique_long l 22 144 tgggtttaga 440 0.0557227157504666 0.142857142857143 2 14 3 15 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 441 0.0602009917660807 0.553846153846154 36 65 47 72 NM_010699 refGene chr7 39739679 + 120908 graph_last 230 648 ccaaataaaa 442 0.0624492948132439 0.527272727272727 29 55 38 61 atccgaaaga 443 0.0629193222447043 1.66037735849057 88 53 115 59 aaatatattt 444 0.0652013940871952 0 0 7 0 8 NM_019796 refGene chr9 91409335 - 140127 graph_last 0 27 aagaattaaa 445 0.0652013940871952 0 0 7 0 8 aaggaaatgg 446 0.0652013940871952 1.9 57 30 74 33 genomic chr7 74661426 + 0 unique_long l 5 41 acacactgta 447 0.0652013940871952 0 0 7 0 8 agatcaaaag 448 0.0652013940871952 0 0 7 0 8 agctcttgta 449 0.0652013940871952 0.1 1 10 1 11 NM_011969 refGene chr2 179848177 - 82346 graph_last l 53 162 aggcgggatc 450 0.0652013940871952 3.42857142857143 24 7 31 8 genomic chr19 60068218 + 0 unique_long l 4 21 agtcagaatt 451 0.0652013940871952 0 0 7 0 8 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 452 0.0652013940871952 0.370370370370370 10 27 13 30 atgatcaaaa 453 0.0652013940871952 0 0 7 0 8 atttttatac 454 0.0652013940871952 0.1 1 10 1 11 atttttgtat 455 0.0652013940871952 0.1 1 10 1 11 cacacacaca 456 0.0652013940871952 6.5 13 2 17 2 cactttactt 457 0.0652013940871952 0.1 1 10 1 11 BC003217 knownGene chr17 62607782 + 60440 graph_second 0 8 cagacgggtg 458 0.0652013940871952 0 0 7 0 8 cagggcgatg 459 0.0652013940871952 0 0 7 0 8 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 460 0.0652013940871952 2.8 28 10 36 11 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 461 0.0652013940871952 1.63157894736842 93 57 121 63 NM_153581 refGene chr8 55142237 + 130191 graph_last l 380 809 gagtgctttg 462 0.0652013940871952 0.6 48 80 63 89 gccattttct 463 0.0652013940871952 0 0 7 0 8 NM_153555 refGene chr1 176054753 - 8542 graph_last l 149 466 ggagcaggag 464 0.0652013940871952 2.46153846153846 32 13 42 14 NM_009468 refGene chr18 43986451 - 64437 graph_last 0 11 gtgctttcat 465 0.0652013940871952 0 0 7 0 8 gtggtgcacg 466 0.0652013940871952 6.5 13 2 17 2 NM_177343 refGene chr2 5212156 - 71660 graph_last l 37 60 tatacatatc 467 0.0652013940871952 0 0 7 0 8 NM_019942 refGene chrX 28238769 - 147895 graph_last l 17 49 tcaattttca 468 0.0652013940871952 0.1 1 10 1 11 tcacaatgag 469 0.0652013940871952 0.1 1 10 1 11 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 470 0.0652013940871952 0 0 7 0 8 NM_027355 refGene chr16 32013542 + 52918 graph_last l 5 18 tcagaggcaa 471 0.0652013940871952 0 0 7 0 8 tgactgggag 472 0.0652013940871952 0 0 7 0 8 BC038341 knownGene chr1 56472034 - 2474 graph_last l 11 36 tgagttgcca 473 0.0652013940871952 0 0 7 0 8 AK015384 knownGene chr1 16230707 - 579 graph_second 0 3 tgatgctttc 474 0.0652013940871952 0 0 7 0 8 NM_033320 refGene chr9 64431793 + 138411 graph_last 0 4 tgctgatggc 475 0.0652013940871952 0 0 7 0 8 tgtaaataaa 476 0.0652013940871952 0.1 1 10 1 11 tgtataaata 477 0.0652013940871952 0 0 7 0 8 AV007161 all_est chr5 34384558 - 101976 graph_last 0 3 tgtctctata 478 0.0652013940871952 0 0 7 0 8 NM_012010 refGene chrX 83927636 + 149980 graph_last 14 45 ttccaataca 479 0.0652013940871952 6.5 13 2 17 2 ttccagtctt 480 0.0652013940871952 0 0 7 0 8 NM_029870 refGene chr17 26374491 + 58052 graph_last 0 81 ttgaatgtaa 481 0.0652013940871952 0.1 1 10 1 11 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 482 0.0660653535341147 2.22222222222222 40 18 52 20 atctttctgg 483 0.0698921928442679 4 20 5 26 6 ttatcactgt 484 0.0703500602361894 0.263157894736842 5 19 7 21 agaccctgtc 485 0.0711030526149132 5 15 3 19 3 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 486 0.0711134321079633 2.88888888888889 26 9 34 10 cagcatcacc 487 0.0729576057388797 0.636363636363636 63 99 82 109 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 488 0.0754355682068155 4 16 4 21 4 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 489 0.0777232110613858 0.36 9 25 12 28 NM_023328 refGene chr13 59233431 - 35436 graph_last l 99 174 tgaactgtgt 490 0.0783110776946182 0.277777777777778 5 18 6 20 NM_010771 refGene chr18 35750143 + 63875 graph_second l 11 76 tttggatgtt 491 0.0783110776946182 0.277777777777778 5 18 6 20 ctatttcaaa 492 0.0791352647923793 0.392857142857143 11 28 14 31 NM_022423 refGene chr11 58531070 - 20273 graph_second 0 9 aatgtgctcg 493 0.0795429594231741 Inf 8 0 10 0 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 494 0.0795429594231741 Inf 8 0 10 0 NM_026002 refGene chr15 34549312 + 46126 graph_last l 13 44 agcactagtg 495 0.0795429594231741 Inf 8 0 10 0 atagcatctg 496 0.0795429594231741 0.25 4 16 5 18 NM_016862 refGene chr19 55509561 - 70624 graph_last 1 73 cacacactca 497 0.0795429594231741 Inf 8 0 10 0 cagttggttc 498 0.0795429594231741 0.25 4 16 5 18 L31652 knownGene chrX 90352430 + 150261 graph_last l 7 33 ccagaaggcc 499 0.0795429594231741 Inf 8 0 10 0 genomic chr5 92466331 - 0 unique_long l 31 107 cccactgagt 500 0.0795429594231741 Inf 8 0 10 0 NM_175149 refGene chr8 126434727 - 134358 graph_last l 6 46 cccaggctca 501 0.0795429594231741 Inf 8 0 10 0 NM_054102 refGene chr1 154790569 + 7138 graph_last l 48 98 cctaccaata 502 0.0795429594231741 0.25 4 16 5 18 NM_175407 refGene chr10 44614990 - 12030 graph_last l 4 21 ctcagcgctg 503 0.0795429594231741 Inf 8 0 10 0 genomic chr11 30013082 - 0 unique_long l 19 65 ctctggatgg 504 0.0795429594231741 Inf 8 0 10 0 gaagtgaccc 505 0.0795429594231741 Inf 8 0 10 0 NM_007920 refGene chr14 71063383 - 43051 graph_second l 5 34 gaggcagccg 506 0.0795429594231741 Inf 8 0 10 0 genomic chr5 134663519 + 0 unique_long l 3 16 gagttgcagg 507 0.0795429594231741 Inf 8 0 10 0 gatgaggatg 508 0.0795429594231741 Inf 8 0 10 0 ggagagctgt 509 0.0795429594231741 Inf 8 0 10 0 ggcctgcccc 510 0.0795429594231741 Inf 8 0 10 0 AK122419 knownGene chr5 117855920 - 106497 graph_last l 13 35 ggtgactgtt 511 0.0795429594231741 Inf 8 0 10 0 NM_139272 refGene chr8 126141377 + 134336 graph_last 3 36 gtggccagtg 512 0.0795429594231741 Inf 8 0 10 0 gtggctcact 513 0.0795429594231741 Inf 8 0 10 0 NM_011591 refGene chrX 6466896 + 147054 graph_last 3 21 gtgggctctg 514 0.0795429594231741 Inf 8 0 10 0 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 515 0.0795429594231741 0.510204081632653 25 49 33 54 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 516 0.0795429594231741 0.318181818181818 7 22 9 24 taaaataaaa 517 0.0795429594231741 0.25 4 16 5 18 tcctacagtg 518 0.0795429594231741 Inf 8 0 10 0 NM_016748 refGene chr4 119645311 - 96782 graph_last l 22 79 tgcctacagt 519 0.0795429594231741 0.25 4 16 5 18 NM_012024 refGene chr12 71378734 - 28957 graph_last l 5 32 ttctccagcc 520 0.0795429594231741 Inf 8 0 10 0 aagaaaaaaa 521 0.0804092655045403 2.38461538461538 31 13 41 14 NM_018858 refGene chr5 116315654 + 106380 graph_last l 120 447 ctcttccccc 522 0.0804092655045403 2 44 22 58 24 NM_010817 refGene chr8 109113003 - 133214 graph_last l 31 117 tattgtttac 523 0.0820871985733538 0.214285714285714 3 14 4 16 NM_021345 refGene chr9 67379153 - 138637 graph_last l 60 153 ttctagttgc 524 0.0820871985733538 0.214285714285714 3 14 4 16 AK129143 knownGene chr18 78788467 - 66286 graph_last l 4 21 caaagagctg 525 0.0821362954528458 10 10 1 13 1 genomic chr4 129240676 - 0 unique_long l 22 104 cagccaggtg 526 0.0821362954528458 10 10 1 13 1 AA139939 all_est chr3 90376105 - 86642 graph_last 0 39 gcgggggtgc 527 0.0821362954528458 10 10 1 13 1 NM_152895 refGene chr1 137538600 + 6443 graph_last 2 24 taattcagga 528 0.0821362954528458 10 10 1 13 1 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 529 0.0821362954528458 10 10 1 13 1 NM_010488 refGene chr4 109064409 - 96128 graph_last l 6 34 tttgttgtga 530 0.0821362954528458 10 10 1 13 1 AK012553 knownGene chr2 107145879 + 77702 graph_last 8 28 accgacggtt 531 0.0824034938610153 11 11 1 14 1 NM_011531 refGene chr1 135390854 - 6259 graph_last l 7 39 ccagggggac 532 0.0824034938610153 11 11 1 14 1 NM_019827 refGene chr16 38048116 + 53446 graph_last l 18 74 ctcggattca 533 0.0824034938610153 11 11 1 14 1 NM_176947 refGene chr12 60629241 - 28364 graph_last l 16 58 gaccgtggag 534 0.0824034938610153 11 11 1 14 1 gcgacgcggg 535 0.0824034938610153 11 11 1 14 1 NM_019491 refGene chr13 17712207 - 32922 graph_last 22 61 tacgacgagt 536 0.0824034938610153 11 11 1 14 1 NM_026993 refGene chr3 149807578 + 90163 graph_last l 29 79 tcttgctgca 537 0.0824034938610153 11 11 1 14 1 caatgctgcc 538 0.0827825650239533 0.153846153846154 2 13 3 14 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 539 0.0827825650239533 3.14285714285714 22 7 29 8 tcaataaaaa 540 0.0827825650239533 0.153846153846154 2 13 3 14 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 541 0.0829455587250567 2.7 27 10 35 11 AK122204 knownGene chr2 92236623 + 76871 graph_last l 43 102 agacaactaa 542 0.0864112195568001 0.3 6 20 8 22 tgtataaaat 543 0.0864112195568001 0.3 6 20 8 22 NM_053075 refGene chr5 22955215 - 101155 graph_last l 54 151 ttacactact 544 0.0864112195568001 0.3 6 20 8 22 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 545 0.0884443207310224 0.379310344827586 11 29 15 32 agagcagaga 546 0.0953310577845519 6 12 2 16 2 NM_133831 refGene chr7 12959477 + 118963 graph_last l 20 94 aggcaggccg 547 0.0953310577845519 6 12 2 16 2 caaaactgta 548 0.0953310577845519 6 12 2 16 2 cagctttgct 549 0.0953310577845519 6 12 2 16 2 NM_026003 refGene chr19 26363863 + 68879 graph_last l 33 89 cgtgcagaca 550 0.0953310577845519 6 12 2 16 2 ctagtgttga 551 0.0953310577845519 6 12 2 16 2 gcggcgccgc 552 0.0953310577845519 6 12 2 16 2 tgcagcactg 553 0.0953310577845519 6 12 2 16 2 ggtttgttca 554 0.0956929252928018 3.8 19 5 25 6 NM_019685 refGene chr6 89947633 + 114790 graph_last l 44 104 gtggtttgga 555 0.0961870978517665 0.347826086956522 8 23 10 25 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 556 0.097304282123106 1.31515151515152 217 165 284 182 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 557 0.0998145560321767 0.277777777777778 5 18 7 20 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 558 0.0998145560321767 0.277777777777778 5 18 7 20 AK012247 knownGene chr17 88203504 + 61969 graph_last 56 154 agcaggtttt 559 0.0998145560321767 0.277777777777778 5 18 7 20 taaaagttgt 560 0.0998145560321767 0.277777777777778 5 18 7 20 NM_013896 refGene chr12 67019406 - 28702 graph_last l 21 91 tatgagatag 561 0.0998145560321767 0.277777777777778 5 18 7 20 tggacggtgg 562 0.0998145560321767 0.277777777777778 5 18 7 20 NM_011492 refGene chr10 82439824 + 14048 graph_last l 15 81 ccgccctgcg 563 0.101469449343953 4.66666666666667 14 3 18 3 NM_178252 refGene chr7 24426999 - 119943 graph_last l 11 49 cctcccgaca 564 0.101469449343953 4.66666666666667 14 3 18 3 cggttgctgg 565 0.101469449343953 2.54545454545455 28 11 36 12 NM_023336 refGene chr2 27723480 - 73019 graph_last l 9 47 gaggcgcctg 566 0.101469449343953 4.66666666666667 14 3 18 3 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 567 0.102857703069325 0.407407407407407 11 27 14 30 NM_026027 refGene chr18 36492704 + 63963 graph_last l 96 221 tgggttagac 568 0.102857703069325 0.375 9 24 12 27 NM_024499 refGene chr10 83415390 - 14155 graph_last l 39 135 atggcatcag 569 0.103630017527236 3.75 15 4 20 4 cctttaatct 570 0.103630017527236 3.75 15 4 20 4 NM_010151 refGene chr13 76260992 - 36347 graph_last l 16 69 tccatccagt 571 0.103630017527236 3.75 15 4 20 4 NM_145979 refGene chr6 127056993 + 116948 graph_last l 54 136 tgcaggagct 572 0.103630017527236 3.75 15 4 20 4 tgctgtgaaa 573 0.103630017527236 0.4 12 30 16 33 aatggatgaa 574 0.104696658657073 0.111111111111111 1 9 1 10 ataccatctc 575 0.104696658657073 0.111111111111111 1 9 1 10 NM_146135 refGene chr3 99480722 + 87490 graph_last l 8 33 ggggctctgt 576 0.104696658657073 0.111111111111111 1 9 1 10 NM_023343 refGene chr1 93291700 - 4680 graph_last l 13 45 gttgtaaata 577 0.104696658657073 0.111111111111111 1 9 1 10 AY057898 knownGene chr10 124793682 - 16432 graph_last 2 18 taccattaca 578 0.104696658657073 0.111111111111111 1 9 1 10 NM_153545 refGene chr11 120276827 + 25607 graph_last l 50 74 tcccaggaaa 579 0.104696658657073 0.111111111111111 1 9 1 10 NM_080844 refGene chr1 164569762 - 7788 graph_last l 2 21 tgagtggttt 580 0.104696658657073 0.111111111111111 1 9 1 10 NM_177906 refGene chr9 29592164 + 136011 graph_last l 29 65 ttacattgta 581 0.104696658657073 0.111111111111111 1 9 1 10 ttgtgtgttt 582 0.104696658657073 0.111111111111111 1 9 1 10 BC034283 knownGene chr13 92446699 - 36949 graph_last l 19 55 ttttcagtgg 583 0.104696658657073 0.111111111111111 1 9 1 10 NM_008996 refGene chr11 20125068 - 18028 graph_last 0 18 ttttcattta 584 0.104696658657073 0.111111111111111 1 9 1 10 gggtttttat 585 0.106593170001760 1.61224489795918 79 49 103 54 aggagagtgt 586 0.106951252984894 0.294117647058824 5 17 6 19 atcctggtaa 587 0.106951252984894 0.333333333333333 7 21 9 23 NM_008632 refGene chr1 68044382 - 3222 graph_last 0 44 attggcattt 588 0.106951252984894 0.294117647058824 5 17 6 19 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 589 0.106951252984894 0.333333333333333 7 21 9 23 NM_153053 refGene chr3 98878996 + 87421 graph_last l 31 87 tatagaaaaa 590 0.106951252984894 0.294117647058824 5 17 6 19 tgcaataaaa 591 0.106951252984894 0.294117647058824 5 17 6 19 NM_177176 refGene chr4 97166772 + 95245 graph_last 2 17 aaaaaagaaa 592 0.107590298442326 0 0 6 0 7 genomic chr3 82522449 + 0 unique_long l 18 26 aaaaattgga 593 0.107590298442326 0 0 6 0 7 NM_025287 refGene chr11 95076983 + 23280 graph_last l 2 20 aatatggaga 594 0.107590298442326 0 0 6 0 7 NM_175930 refGene chr12 113767444 + 31667 graph_last 3 26 actctgctgt 595 0.107590298442326 0 0 6 0 7 agatctatac 596 0.107590298442326 0.51063829787234 24 47 32 52 agcctaaaaa 597 0.107590298442326 0 0 6 0 7 agggacctcc 598 0.107590298442326 0 0 6 0 7 attgttcact 599 0.107590298442326 0 0 6 0 7 caaagaaaaa 600 0.107590298442326 0 0 6 0 7 AY255603 knownGene chr9 109276396 - 141189 graph_last l 7 21 caaaggtgct 601 0.107590298442326 0 0 6 0 7 caaatgttaa 602 0.107590298442326 0 0 6 0 7 AV369886 all_est chr13 41688354 + 34275 graph_last 11 36 cacttatata 603 0.107590298442326 0 0 6 0 7 NM_028870 refGene chr13 54375564 - 35055 graph_last l 26 55 cagagagaga 604 0.107590298442326 0 0 6 0 7 NM_008707 refGene chr11 102729871 + 24151 graph_last l 17 28 cagccgtgat 605 0.107590298442326 0 0 6 0 7 AK122475 knownGene chr10 19312467 - 10688 graph_last l 15 34 ccaaaagact 606 0.107590298442326 0 0 6 0 7 NM_133722 refGene chr7 76353840 + 122669 graph_last l 3 27 cgtcctttat 607 0.107590298442326 0 0 6 0 7 ctatattaac 608 0.107590298442326 0.266666666666667 4 15 5 17 gaaaaataac 609 0.107590298442326 0 0 6 0 7 gacattactc 610 0.107590298442326 0 0 6 0 7 AU067644 all_est chr2 104406186 - 77512 graph_last l 23 42 gagttgctgt 611 0.107590298442326 0 0 6 0 7 NM_134007 refGene chr10 73300896 - 13506 graph_last l 13 46 gatacacttt 612 0.107590298442326 0 0 6 0 7 gcaacaacac 613 0.107590298442326 0 0 6 0 7 NM_016802 refGene chr9 110942452 + 141363 graph_last l 24 41 gctggtttaa 614 0.107590298442326 0 0 6 0 7 NM_016759 refGene chr11 102066168 + 24069 graph_last l 40 181 ggaagtggtg 615 0.107590298442326 3 21 7 28 8 ggcttgccag 616 0.107590298442326 0 0 6 0 7 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 617 0.107590298442326 0.454545454545455 15 33 19 36 gggaacttgg 618 0.107590298442326 0 0 6 0 7 ggttaaatgt 619 0.107590298442326 0 0 6 0 7 AK015640 knownGene chr14 40941724 + 40993 graph_last l 4 16 gtaacaagta 620 0.107590298442326 0 0 6 0 7 gtcaaaaaaa 621 0.107590298442326 0.473684210526316 18 38 24 42 NM_019802 refGene chr6 73476352 - 113867 graph_second 1 8 gtttcagcac 622 0.107590298442326 0 0 6 0 7 NM_138599 refGene chr16 57606143 + 54473 graph_last l 40 138 taaattcaca 623 0.107590298442326 0.266666666666667 4 15 5 17 taaattggat 624 0.107590298442326 0 0 6 0 7 taacaggaaa 625 0.107590298442326 0 0 6 0 7 NM_175552 refGene chr3 103169091 - 87686 graph_last l 6 20 taaggtcata 626 0.107590298442326 0 0 6 0 7 NM_023403 refGene chr7_random 38721378 + 127300 graph_last l 23 55 tacacgtacc 627 0.107590298442326 0 0 6 0 7 tacatatata 628 0.107590298442326 0 0 6 0 7 tagacgtact 629 0.107590298442326 0.266666666666667 4 15 5 17 genomic chr5 62944198 + 0 unique_long l 7 25 tagtgtgtga 630 0.107590298442326 0 0 6 0 7 NM_033270 refGene chr12 17220525 + 26472 graph_last l 25 52 tatacaaagt 631 0.107590298442326 0 0 6 0 7 tatgctgtaa 632 0.107590298442326 0.266666666666667 4 15 5 17 NM_177103 refGene chr16 31670049 + 52875 graph_last 17 27 tattaataag 633 0.107590298442326 0 0 6 0 7 NM_145956 refGene chrX 65187437 - 149330 graph_last 0 11 tattacatta 634 0.107590298442326 0 0 6 0 7 NM_026817 refGene chr15 91224721 + 49278 graph_last 2 10 tcttcttagt 635 0.107590298442326 0 0 6 0 7 tggcaaggat 636 0.107590298442326 0 0 6 0 7 AU259199 all_est chr1 62030529 - 2845 graph_last 12 29 tgtggcatac 637 0.107590298442326 0 0 6 0 7 NM_030189 refGene chr4 134228395 - 98066 graph_last l 12 42 tgttattttg 638 0.107590298442326 0 0 6 0 7 NM_152804 refGene chr13 109184589 + 38028 graph_last l 10 45 ttagagaagt 639 0.107590298442326 0 0 6 0 7 NM_145969 refGene chr14 21167374 + 39829 graph_last l 62 159 ttgcttttgg 640 0.107590298442326 2.6 26 10 34 11 tttccattaa 641 0.107590298442326 0 0 6 0 7 NM_021448 refGene chr18 25268369 + 63413 graph_last l 49 141 ctgtcaaaga 642 0.108264067429507 0.333333333333333 8 24 11 26 NM_133348 refGene chr4 150384877 + 99558 graph_last l 102 304 gacaccagag 643 0.108264067429507 0.333333333333333 8 24 11 26 NM_025550 refGene chr14 9444346 - 39138 graph_last l 32 106 taaagccact 644 0.108264067429507 0.333333333333333 8 24 11 26 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 645 0.108264067429507 0.333333333333333 8 24 11 26 ttcttgactt 646 0.110277487948276 0.392857142857143 11 28 15 31 aacatacaag 647 0.110285438153799 Inf 7 0 9 0 NM_146200 refGene chr7 118708396 - 125113 graph_last l 12 36 aagattcgag 648 0.110285438153799 9 9 1 12 1 aatatgcata 649 0.110285438153799 Inf 7 0 9 0 genomic chr13 71065301 + 0 unique_short s 1 51 acacgacgta 650 0.110285438153799 0.214285714285714 3 14 4 15 NM_016686 refGene chr11 87641994 + 22842 graph_last l 5 24 acctcacctt 651 0.110285438153799 9 9 1 12 1 NM_183154 refGene chr12 79621565 + 29644 graph_last l 24 43 accttcagat 652 0.110285438153799 Inf 7 0 9 0 NM_011552 refGene chr18 60870033 + 65230 graph_last 1 15 acttccaagg 653 0.110285438153799 Inf 7 0 9 0 NM_007697 refGene chr6 105396974 + 115725 graph_last l 6 33 agaacaacac 654 0.110285438153799 Inf 7 0 9 0 agatccagct 655 0.110285438153799 Inf 7 0 9 0 genomic chr11 80043972 - 0 unique_long l 4 23 agggtgcttc 656 0.110285438153799 Inf 7 0 9 0 atctcgagag 657 0.110285438153799 Inf 7 0 9 0 atgcagactt 658 0.110285438153799 0.454545454545455 15 33 20 37 atgtcatcaa 659 0.110285438153799 2.66666666666667 24 9 32 10 NM_013834 refGene chr8 22345312 + 128587 graph_last 0 8 attgcctata 660 0.110285438153799 Inf 7 0 9 0 NM_008640 refGene chr12 9084302 - 26222 graph_last 25 107 caaccatcat 661 0.110285438153799 0.214285714285714 3 14 4 15 NM_025482 refGene chr2 181399879 + 82485 graph_last l 38 91 caagctcatc 662 0.110285438153799 Inf 7 0 9 0 NM_010583 refGene chr11 45991197 + 19428 graph_second 0 9 cacgacctga 663 0.110285438153799 Inf 7 0 9 0 NM_026934 refGene chr2 84026358 + 76261 graph_last 13 46 cacttcctcc 664 0.110285438153799 Inf 7 0 9 0 NM_178576 refGene chr5 144183355 - 108464 graph_last l 5 26 cagaggccgc 665 0.110285438153799 Inf 7 0 9 0 NM_177296 refGene chr6 29392712 - 111132 graph_last 19 58 caggttgaca 666 0.110285438153799 Inf 7 0 9 0 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 667 0.110285438153799 0.214285714285714 3 14 4 15 genomic chr12 103766563 + 0 unique_long l 6 46 cattttgttt 668 0.110285438153799 Inf 7 0 9 0 cctgcaggtc 669 0.110285438153799 Inf 7 0 9 0 NM_025594 refGene chr18 36913799 + 64022 graph_last b 22 52 cgcgtggaac 670 0.110285438153799 Inf 7 0 9 0 NM_025709 refGene chr2 34950213 - 73642 graph_last l 15 37 cgtccttcct 671 0.110285438153799 Inf 7 0 9 0 ctactgacat 672 0.110285438153799 Inf 7 0 9 0 ctcaataaac 673 0.110285438153799 0.214285714285714 3 14 4 15 ctgacttttc 674 0.110285438153799 Inf 7 0 9 0 NM_011492 refGene chr10 82454712 + 14048 graph_last 5 16 ctggacctgg 675 0.110285438153799 Inf 7 0 9 0 NM_007990 refGene chr19 6104038 + 67634 graph_last l 18 60 ctgggaggta 676 0.110285438153799 9 9 1 12 1 NM_008385 refGene chr4 123806814 - 97069 graph_last l 64 157 ctttgggggc 677 0.110285438153799 0.214285714285714 3 14 4 15 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 678 0.110285438153799 Inf 7 0 9 0 NM_021518 refGene chr4 8509605 + 91121 graph_last 7 25 gaaacttctg 679 0.110285438153799 Inf 7 0 9 0 gaacttaaag 680 0.110285438153799 0.214285714285714 3 14 4 15 NM_007597 refGene chr11 49883883 + 19666 graph_last 0 29 gacatcagag 681 0.110285438153799 Inf 7 0 9 0 NM_031842 refGene chr15 101661502 + 49950 graph_last l 28 76 gaccaaaatt 682 0.110285438153799 9 9 1 12 1 gagctggtga 683 0.110285438153799 9 9 1 12 1 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 684 0.110285438153799 Inf 7 0 9 0 NM_007551 refGene chr9 46277330 + 137099 graph_last l 6 26 gccaatctac 685 0.110285438153799 Inf 7 0 9 0 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 686 0.110285438153799 9 9 1 12 1 gctgtcgtca 687 0.110285438153799 Inf 7 0 9 0 gcttccaatc 688 0.110285438153799 Inf 7 0 9 0 NM_010331 refGene chr15 77966799 + 48139 graph_last 4 34 ggccccggac 689 0.110285438153799 Inf 7 0 9 0 AK017507 knownGene chr4 21817716 + 91710 graph_last l 11 45 gggctgcttt 690 0.110285438153799 Inf 7 0 9 0 NM_010025 refGene chrX 132126626 - 151844 graph_last l 2 15 gtcagcaagc 691 0.110285438153799 Inf 7 0 9 0 NM_133925 refGene chr6 28962494 - 111090 graph_last l 16 41 gtccgttctc 692 0.110285438153799 Inf 7 0 9 0 gtctttgaag 693 0.110285438153799 Inf 7 0 9 0 NM_008448 refGene chr18 6415243 - 62563 graph_last 31 83 gttaattttg 694 0.110285438153799 Inf 7 0 9 0 genomic chr6 89403818 - 0 unique_short s 3 19 gttcgaccag 695 0.110285438153799 9 9 1 12 1 NM_021881 refGene chr17 9967167 - 56956 graph_last l 4 22 taatgaaatt 696 0.110285438153799 Inf 7 0 9 0 tacccaggca 697 0.110285438153799 Inf 7 0 9 0 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 698 0.110285438153799 9 9 1 12 1 NM_153595 refGene chr10 89048034 - 14566 graph_last l 36 61 tcacagacac 699 0.110285438153799 Inf 7 0 9 0 tctacaagaa 700 0.110285438153799 0.635294117647059 54 85 71 94 tctctagctg 701 0.110285438153799 9 9 1 12 1 NM_025441 refGene chr12 65200196 - 28531 graph_last l 9 30 tgagtcaggg 702 0.110285438153799 Inf 7 0 9 0 NM_007936 refGene chr1 79102102 - 3765 graph_last l 16 47 tggaaagttc 703 0.110285438153799 Inf 7 0 9 0 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 704 0.110285438153799 0.522727272727273 23 44 30 49 genomic chr1 125486993 - 0 unique_short s 0 24 tggcgaaaaa 705 0.110285438153799 Inf 7 0 9 0 NM_172262 refGene chr13 47160716 - 34624 graph_last l 5 19 ttaaagagca 706 0.110285438153799 Inf 7 0 9 0 ttaggcaagt 707 0.110285438153799 0.315789473684211 6 19 8 21 NM_146005 refGene chr10 73135380 + 13402 graph_last 36 79 ttcttcagac 708 0.110285438153799 Inf 7 0 9 0 genomic chr18 70041110 - 0 unique_long l 9 33 ttgtgcttgt 709 0.110285438153799 Inf 7 0 9 0 NM_008224 refGene chrX 63545679 - 149215 graph_last l 5 26 tttagtcaaa 710 0.110285438153799 Inf 7 0 9 0 NM_008990 refGene chr7 16667851 - 119346 graph_last 27 70 tttataagtt 711 0.110285438153799 Inf 7 0 9 0 NM_008908 refGene chr18 53697959 - 64884 graph_last 0 18 tttgtaaaaa 712 0.110285438153799 Inf 7 0 9 0 NM_008687 refGene chr4 80899574 - 94453 graph_last l 4 24 tttgtaaagc 713 0.110285438153799 Inf 7 0 9 0 BC003217 knownGene chr17 62607777 - 60440 graph_last 28 64 ctgaaaaagt 714 0.111591522145647 0.181818181818182 2 11 2 12 NM_133679 refGene chr16 93125087 - 56032 graph_last 3 27 cttttgctat 715 0.111591522145647 0.181818181818182 2 11 2 12 gcctctcctc 716 0.111591522145647 0.181818181818182 2 11 2 12 NM_023671 refGene chr7 89832761 + 123232 graph_last l 10 53 taccatcagc 717 0.111591522145647 0.181818181818182 2 11 2 12 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 718 0.111591522145647 0.181818181818182 2 11 2 12 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 719 0.111591522145647 0.181818181818182 2 11 2 12 ttgacaaact 720 0.111591522145647 0.181818181818182 2 11 2 12 NM_008973 refGene chr6 36810971 + 111736 graph_last l 17 84 tttcaatctt 721 0.111591522145647 0.181818181818182 2 11 2 12 tttgctcttt 722 0.111591522145647 0.181818181818182 2 11 2 12 gtgaccttgt 723 0.111591834134514 0.166666666666667 2 12 3 13 tgcttcaatt 724 0.111591834134514 0.166666666666667 2 12 3 13 aatttcaaaa 725 0.111644505717992 0.63953488372093 55 86 72 95 tcctgaaata 726 0.113845150999489 0.363636363636364 8 22 10 24 NM_010206 refGene chr8 24418477 + 128679 graph_last l 28 117 ggggagacgc 727 0.113860632040716 3.6 18 5 24 6 gccaagtgga 728 0.121548095709232 1.33093525179856 185 139 242 154 ttttatgttt 729 0.121777316011031 0.709923664122137 93 131 121 145 NM_007637 refGene chr15 31931318 + 46012 graph_last l 50 193 tcatagaaac 730 0.122004431410125 0.375 9 24 12 26 NM_175251 refGene chr15 98368120 + 49697 graph_last l 4 37 atgctgagag 731 0.123670018899832 5.5 11 2 15 2 NM_027016 refGene chr3 31714208 + 83982 graph_last l 55 162 atgggtcatc 732 0.123670018899832 5.5 11 2 15 2 ccagtgcctg 733 0.123670018899832 5.5 11 2 15 2 NM_008512 refGene chr10 130814379 - 16708 graph_last l 32 102 ctcagtatcc 734 0.123670018899832 5.5 11 2 15 2 gccttggtga 735 0.123670018899832 5.5 11 2 15 2 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 736 0.123670018899832 5.5 11 2 15 2 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 737 0.124224959421788 0.294117647058824 5 17 7 19 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 738 0.125031457309520 3.4 17 5 22 5 NM_178060 refGene chr11 98352551 + 23676 graph_last l 413 1055 tctgtagccc 739 0.125911503551193 0.702479338842975 85 121 111 134 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 740 0.129617841809457 2 38 19 50 21 ggctgcagcc 741 0.134061937737626 2.11764705882353 36 17 47 19 AK075830 knownGene chr16 8108129 - 51324 graph_last l 24 106 ctcgctaatg 742 0.135718739688277 3 21 7 27 8 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 743 0.137073010123014 2.33333333333333 28 12 36 13 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 744 0.138250708051526 2.33333333333333 28 12 37 13 genomic chr10 64909820 + 0 unique_long l 8 46 gtgccaagga 745 0.138266716474793 0.3125 5 16 6 18 NM_018748 refGene chr9 120963196 + 142048 graph_last l 42 101 tcatctcaga 746 0.138266716474793 0.3125 5 16 6 18 gtctgctgat 747 0.139004936893350 0.726027397260274 106 146 139 162 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 748 0.141597687519632 0.347826086956522 8 23 11 25 tacttgtgtt 749 0.142967431845337 0.416666666666667 10 24 13 27 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 750 0.142967431845337 0.5 19 38 25 42 NM_024191 refGene chr8 95957660 + 132516 graph_last l 79 199 tgaccattag 751 0.142967431845337 0.416666666666667 10 24 13 27 NM_011029 refGene chr9 122506722 + 142160 graph_last 0 327 tgtcatctag 752 0.142967431845337 0.416666666666667 10 24 13 27 gtgttaacca 753 0.147598600427912 1.61363636363636 71 44 93 49 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 754 0.149077208352673 2.66666666666667 24 9 31 10 gtgactcaca 755 0.150238984051880 3.16666666666667 19 6 25 7 NM_018745 refGene chr15 39066010 - 46428 graph_last l 8 56 aaatagacgt 756 0.152640055754622 0.285714285714286 4 14 5 16 CA316586 all_est chr6 30666721 + 111294 graph_last l 30 123 tacttacaag 757 0.152640055754622 0.285714285714286 4 14 5 16 aactgaacaa 758 0.154752926409775 0.125 1 8 1 9 NM_178060 refGene chr11 98352515 + 23676 graph_second l 6 31 agtctgtttc 759 0.154752926409775 0.125 1 8 1 9 NM_011342 refGene chr3 100807621 + 87579 graph_last l 7 31 atgcacagat 760 0.154752926409775 0.125 1 8 1 9 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 761 0.154752926409775 0.125 1 8 1 9 cagttgtgag 762 0.154752926409775 0.125 1 8 1 9 cttctatttg 763 0.154752926409775 0.125 1 8 1 9 gcatagggta 764 0.154752926409775 0.125 1 8 1 9 NM_138752 refGene chr7 21997012 - 119696 graph_last 2 16 gttattttgt 765 0.154752926409775 0.125 1 8 1 9 NM_153140 refGene chr17 25582781 - 57952 graph_last l 10 27 tagagtaggt 766 0.154752926409775 0.125 1 8 1 9 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 767 0.154752926409775 0.125 1 8 1 9 NM_029979 refGene chr14 58039479 - 42269 graph_last 5 18 tcagttgtgg 768 0.154752926409775 0.125 1 8 1 9 NM_172787 refGene chr10 27146708 - 11123 graph_last l 6 32 tgatatgaat 769 0.154752926409775 0.125 1 8 1 9 NM_134014 refGene chr11 23195325 + 18254 graph_last l 9 30 tgcatatcat 770 0.154752926409775 0.125 1 8 1 9 AK048260 knownGene chr8 111573095 + 133351 graph_last l 19 45 ttgcagcaaa 771 0.154752926409775 0.125 1 8 1 9 ccatattatg 772 0.155470366876481 0.333333333333333 6 18 8 20 taaaatttgt 773 0.155470366876481 0.333333333333333 6 18 8 20 NM_145385 refGene chr6 126864632 + 116927 graph_last l 150 428 gtcctataag 774 0.160789186633725 0.428571428571429 12 28 16 31 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 775 0.163316085049720 0.380952380952381 8 21 10 23 gtgagcttgt 776 0.163316085049720 0.380952380952381 8 21 10 23 NM_025936 refGene chr11 35449596 - 18948 graph_last l 26 105 tgcacacaag 777 0.163316085049720 0.380952380952381 8 21 10 23 taggaggtaa 778 0.164980136469035 3.6 18 5 23 6 gaacatattt 779 0.165787707126998 0.230769230769231 3 13 4 14 gagaaatata 780 0.165787707126998 0.230769230769231 3 13 4 14 NM_008717 refGene chr6 85114223 + 114381 graph_last 26 70 gataatacct 781 0.165787707126998 0.230769230769231 3 13 4 14 aaaattttca 782 0.165828781796307 0 0 5 0 6 NM_010798 refGene chr10 78003266 - 13706 graph_last 129 474 aacgctgcca 783 0.165828781796307 1.875 45 24 59 27 aagatgcatt 784 0.165828781796307 Inf 6 0 8 0 aatgacctgg 785 0.165828781796307 1.34782608695652 155 115 202 127 aatggaaaat 786 0.165828781796307 0 0 5 0 6 acacagaaat 787 0.165828781796307 0.181818181818182 2 11 3 12 NM_007668 refGene chr5 22576974 - 101122 graph_last l 4 45 accaagctgc 788 0.165828781796307 8 8 1 11 1 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 789 0.165828781796307 Inf 6 0 8 0 NM_011670 refGene chr5_random 2617542 - 109059 graph_second l 9 21 actccgtggc 790 0.165828781796307 Inf 6 0 8 0 NM_008692 refGene chr4 119895790 + 96803 graph_last 0 30 actctgggcc 791 0.165828781796307 Inf 6 0 8 0 actttcctct 792 0.165828781796307 0.181818181818182 2 11 3 12 NM_172683 refGene chr3 97581879 + 87240 graph_last l 4 18 agaactttgc 793 0.165828781796307 Inf 6 0 8 0 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 794 0.165828781796307 Inf 6 0 8 0 AK078964 knownGene chr18 69900496 + 65810 graph_second 0 45 agcaaatcca 795 0.165828781796307 Inf 6 0 8 0 AA607899 all_est chr2 119877739 + 78422 graph_last l 73 275 agcagagaat 796 0.165828781796307 0.483870967741935 15 31 19 34 NM_017392 refGene chr3 111532090 - 88311 graph_second 0 12 agcatcaagg 797 0.165828781796307 Inf 6 0 8 0 agcccccttc 798 0.165828781796307 0 0 5 0 6 agctctgggg 799 0.165828781796307 Inf 6 0 8 0 AK051233 all_mrna chr14 16044346 + 39487 graph_last 0 26 aggcagaggc 800 0.165828781796307 Inf 6 0 8 0 NM_029761 refGene chr2_random 1107954 + 82579 graph_last 1 7 aggttagggc 801 0.165828781796307 0 0 5 0 6 NM_026499 refGene chr2 163549271 + 81143 graph_last l 12 46 agtgtgaaac 802 0.165828781796307 0.2 2 10 2 11 agttaatgaa 803 0.165828781796307 Inf 6 0 8 0 NM_009156 refGene chr7 12915304 - 118959 graph_second l 8 17 agttccccgg 804 0.165828781796307 Inf 6 0 8 0 atcaaatgga 805 0.165828781796307 0 0 5 0 6 atgacaatag 806 0.165828781796307 0.2 2 10 2 11 atggtgatgt 807 0.165828781796307 3 15 5 20 5 atgtggtaat 808 0.165828781796307 0 0 5 0 6 NM_025279 refGene chr13 58182021 - 35372 graph_second 1 37 atgttagtta 809 0.165828781796307 0.181818181818182 2 11 3 12 NM_133697 refGene chr5 64944338 + 103345 graph_last 0 62 attgattaat 810 0.165828781796307 0.181818181818182 2 11 3 12 caaaagaaag 811 0.165828781796307 Inf 6 0 8 0 caaacaaaac 812 0.165828781796307 0 0 5 0 6 caattcaaat 813 0.165828781796307 0.181818181818182 2 11 3 12 AK014379 knownGene chr6 42780791 + 112182 graph_second 0 18 cacaaggtaa 814 0.165828781796307 0 0 5 0 6 NM_022891 refGene chr11 97361200 - 23558 graph_last 1 25 cacatatggt 815 0.165828781796307 0 0 5 0 6 NM_133352 refGene chr19 41277730 + 69785 graph_last l 5 22 cagaattgaa 816 0.165828781796307 0 0 5 0 6 BC044772 knownGene chr12 19450791 + 26628 graph_last l 10 26 cagccaccca 817 0.165828781796307 Inf 6 0 8 0 cagcgcggga 818 0.165828781796307 Inf 6 0 8 0 NM_010327 refGene chr16 18227773 - 52048 graph_last l 6 31 caggagatgt 819 0.165828781796307 8 8 1 11 1 BC040802 knownGene chr1 189041664 + 9388 graph_last l 8 33 catcctgata 820 0.165828781796307 8 8 1 11 1 cattgctcgt 821 0.165828781796307 0 0 5 0 6 NM_008942 refGene chr11 96790218 + 23504 graph_last 0 4 ccaaaaagga 822 0.165828781796307 0 0 5 0 6 NM_008143 refGene chr11 48430780 - 19538 graph_last l 18 32 ccaaagaggt 823 0.165828781796307 0 0 5 0 6 ccaagttgta 824 0.165828781796307 0 0 5 0 6 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 825 0.165828781796307 0.181818181818182 2 11 3 12 cctttcagct 826 0.165828781796307 0 0 5 0 6 NM_198649 refGene chr18 61921178 - 65315 graph_last l 4 16 cgagcagaaa 827 0.165828781796307 0 0 5 0 6 genomic chr15 85458259 + 0 unique_long l 2 12 cgggaaccgc 828 0.165828781796307 Inf 6 0 8 0 NM_026543 refGene chr11 49858631 + 19656 graph_last l 3 30 ctctccggaa 829 0.165828781796307 0.181818181818182 2 11 3 12 AK081646 knownGene chr8 34968996 + 129213 graph_last 7 27 ctgcagtctg 830 0.165828781796307 0 0 5 0 6 NM_029231 refGene chr11 69964265 - 21136 graph_last 1 18 ctggctgatt 831 0.165828781796307 Inf 6 0 8 0 ctgtgtaaag 832 0.165828781796307 8 8 1 11 1 BC057382 knownGene chr14 44059587 - 41177 graph_last l 15 34 cttcatcatc 833 0.165828781796307 Inf 6 0 8 0 cttgaacagg 834 0.165828781796307 0 0 5 0 6 AB093228 knownGene chr3 80718728 - 86083 graph_last 21 41 cttttgatac 835 0.165828781796307 0 0 5 0 6 NM_181815 refGene chr12 86818994 - 30252 graph_last 0 3 gaaaaaaaga 836 0.165828781796307 0 0 5 0 6 gaaagaacca 837 0.165828781796307 0 0 5 0 6 gaagctggag 838 0.165828781796307 0 0 5 0 6 gaaggaaacc 839 0.165828781796307 0 0 5 0 6 gaccctgctt 840 0.165828781796307 0 0 5 0 6 gacctaatga 841 0.165828781796307 Inf 6 0 8 0 NM_021606 refGene chr2 38890209 + 73914 graph_last l 4 34 gactatgcga 842 0.165828781796307 Inf 6 0 8 0 NM_013854 refGene chr17 35659155 - 59005 graph_last l 13 42 gagcgactta 843 0.165828781796307 Inf 6 0 8 0 NM_007794 refGene chr8 107184471 + 132995 graph_last l 6 21 gagggtacag 844 0.165828781796307 Inf 6 0 8 0 AK012088 knownGene chr1 80478595 + 3826 graph_last l 4 17 gatgccgaat 845 0.165828781796307 Inf 6 0 8 0 NM_007688 refGene chr12 50277704 + 27987 graph_second 3 16 gcaatactga 846 0.165828781796307 0 0 5 0 6 gcatcttctg 847 0.165828781796307 0.2 2 10 2 11 NM_019913 refGene chr15 79269778 - 48292 graph_last l 5 15 gccaaagtgg 848 0.165828781796307 Inf 6 0 8 0 AK009957 knownGene chr10 32254639 + 11403 graph_last l 11 39 gccacagcct 849 0.165828781796307 Inf 6 0 8 0 gcccgggaat 850 0.165828781796307 0.8 212 265 277 293 genomic chr4 107497604 - 0 unique_long l 10 20 gccctttctt 851 0.165828781796307 0 0 5 0 6 NM_008608 refGene chr14 45531325 + 41281 graph_last l 2 20 ggacgcccaa 852 0.165828781796307 Inf 6 0 8 0 ggagcactgg 853 0.165828781796307 0.181818181818182 2 11 3 12 ggatgaatgt 854 0.165828781796307 0 0 5 0 6 ggcctgcttt 855 0.165828781796307 0 0 5 0 6 NM_175514 refGene chr2 84247209 + 76272 graph_last l 32 80 ggcgggaagc 856 0.165828781796307 Inf 6 0 8 0 gggattggtg 857 0.165828781796307 Inf 6 0 8 0 NM_010110 refGene chrX 88985124 + 150221 graph_second 0 13 gggggtggag 858 0.165828781796307 8 8 1 11 1 NM_026543 refGene chr11 49825362 + 19656 graph_last l 7 25 ggggtcctgt 859 0.165828781796307 0 0 5 0 6 AK077458 knownGene chr7 5710348 - 118653 graph_last l 3 11 ggtccttatc 860 0.165828781796307 0 0 5 0 6 NM_178688 refGene chr19 57051331 - 70737 graph_last 2 6 ggtgctcctt 861 0.165828781796307 0 0 5 0 6 NM_007471 refGene chr16 86208025 - 55668 graph_last l 7 30 ggttttgtgt 862 0.165828781796307 0 0 5 0 6 NM_008842 refGene chr17 29127747 + 58363 graph_second 3 13 gtagcctgca 863 0.165828781796307 Inf 6 0 8 0 NM_008947 refGene chr12 95672134 + 30593 graph_last 10 50 gtcctggggg 864 0.165828781796307 Inf 6 0 8 0 genomic chr17 44965216 + 0 unique_long l 16 43 gtctgcccgg 865 0.165828781796307 Inf 6 0 8 0 AK010234 knownGene chr11 57407928 + 20174 graph_last 17 41 gtgaagagta 866 0.165828781796307 8 8 1 11 1 gtgctctctg 867 0.165828781796307 8 8 1 11 1 AK122429 knownGene chr8 80319227 + 131527 graph_last l 5 36 gtgtgatgct 868 0.165828781796307 0.2 2 10 2 11 NM_146005 refGene chr10 73138536 + 13489 graph_last l 40 78 gttaataaac 869 0.165828781796307 0.181818181818182 2 11 3 12 BC025881 knownGene chr5 51582035 - 102772 graph_last l 13 41 gttcttctac 870 0.165828781796307 0 0 5 0 6 gtttagtgga 871 0.165828781796307 0.513513513513513 19 37 25 41 taattgaaac 872 0.165828781796307 0 0 5 0 6 NM_023670 refGene chr6 49718491 - 112602 graph_last l 10 23 tacaatgcct 873 0.165828781796307 Inf 6 0 8 0 tatatataca 874 0.165828781796307 0 0 5 0 6 NM_198620 refGene chr5 7905112 - 100322 graph_last l 8 23 tatattaaag 875 0.165828781796307 0 0 5 0 6 NM_029949 refGene chr4 82142108 + 94556 graph_last 0 5 tatgttcctg 876 0.165828781796307 0 0 5 0 6 NM_007869 refGene chr2 18319325 + 72345 graph_last 13 26 tattaaaatg 877 0.165828781796307 0 0 5 0 6 NM_172279 refGene chr7 16276109 + 119277 graph_last l 6 34 tattcaataa 878 0.165828781796307 0.181818181818182 2 11 3 12 NM_172661 refGene chr2 32506465 + 73413 graph_last l 14 50 tcacaatcct 879 0.165828781796307 Inf 6 0 8 0 tcagaagtct 880 0.165828781796307 0 0 5 0 6 tctataaata 881 0.165828781796307 0 0 5 0 6 NM_053089 refGene chr3 52911852 + 84799 graph_last l 11 26 tctgacaaag 882 0.165828781796307 8 8 1 11 1 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 883 0.165828781796307 0.2 2 10 2 11 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 884 0.165828781796307 2.85714285714286 20 7 26 8 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 885 0.165828781796307 1.80769230769231 47 26 62 29 NM_198165 refGene chr12 108696357 + 31479 graph_last l 43 95 tggacgattt 886 0.165828781796307 0.181818181818182 2 11 3 12 genomic chr11 35479765 - 0 unique_long l 19 68 tggccacgtg 887 0.165828781796307 8 8 1 11 1 BC043094 knownGene chr8 122376278 + 133986 graph_last l 3 14 tggctgaggg 888 0.165828781796307 Inf 6 0 8 0 NM_025422 refGene chr2 60528693 + 74971 graph_last 0 22 tggtggctgg 889 0.165828781796307 Inf 6 0 8 0 riB430101E24 rikenClones chr1 4572654 - 70 graph_last 14 28 tggtttttgt 890 0.165828781796307 Inf 6 0 8 0 NM_026829 refGene chr9 91718217 + 140141 graph_last 0 22 tgtccttctt 891 0.165828781796307 Inf 6 0 8 0 NM_145518 refGene chr1 64733297 - 3033 graph_last 8 48 ttaaaaacac 892 0.165828781796307 0 0 5 0 6 ttaacactac 893 0.165828781796307 Inf 6 0 8 0 NM_175101 refGene chr6 115274651 - 116145 graph_last 31 82 ttaagcactg 894 0.165828781796307 0.2 2 10 2 11 ttaatatacc 895 0.165828781796307 0.2 2 10 2 11 AK012697 knownGene chr5 122772560 - 106898 graph_last l 9 27 ttaatcagga 896 0.165828781796307 0 0 5 0 6 NM_023420 refGene chr13 94906480 + 37095 graph_last 10 31 ttacaatcac 897 0.165828781796307 0 0 5 0 6 NM_173034 refGene chr6 48135922 + 112448 graph_last l 5 12 ttacattcca 898 0.165828781796307 0 0 5 0 6 NM_025971 refGene chr17 66098335 - 60700 graph_last l 13 24 ttatttaata 899 0.165828781796307 0 0 5 0 6 NM_008974 refGene chr4 128752984 - 97529 graph_last 9 35 ttctcataag 900 0.165828781796307 8 8 1 11 1 BC046606 knownGene chr5 111426378 - 105964 graph_last l 37 78 ttctggaata 901 0.165828781796307 0.181818181818182 2 11 3 12 NM_013629 refGene chr3 107009648 + 87941 graph_last l 5 21 ttggggtttc 902 0.165828781796307 Inf 6 0 8 0 BC048905 knownGene chr2 70026233 + 75473 graph_last 8 30 ttgtttttgg 903 0.165828781796307 Inf 6 0 8 0 tttgcagcat 904 0.165828781796307 8 8 1 11 1 NM_019797 refGene chr9 68371211 + 138776 graph_last 0 8 tttttggcag 905 0.165828781796307 Inf 6 0 8 0 aacatcatct 906 0.167292286929063 3.5 14 4 18 4 NM_023672 refGene chr4 105908056 + 95788 graph_last l 21 82 acactttttg 907 0.167292286929063 3.5 14 4 18 4 cccaaggaga 908 0.167292286929063 3.5 14 4 18 4 tgggtgctgg 909 0.167292286929063 3.5 14 4 18 4 NM_013540 refGene chr3 82522444 - 86190 graph_last l 43 155 tgtactatgt 910 0.167292286929063 0.423076923076923 11 26 15 29 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 911 0.16902372082756 0.368421052631579 7 19 9 21 NM_026989 refGene chr3 162250930 - 90688 graph_last l 29 58 aagagagtgc 912 0.169659702600149 5.5 11 2 14 2 BC029177 knownGene chr15 43621422 - 46642 graph_last 2 21 aatatcgaaa 913 0.169659702600149 5.5 11 2 14 2 NM_008687 refGene chr4 80899931 + 94453 graph_last l 2 27 agctggtggt 914 0.169659702600149 4 12 3 16 3 ccttgaaata 915 0.169659702600149 5.5 11 2 14 2 NM_023603 refGene chr4 125940891 + 97273 graph_last 13 41 cgtactgagc 916 0.169659702600149 4 12 3 16 3 AK087995 all_mrna chr4 33360729 - 92127 graph_last l 11 61 gagtctgtgt 917 0.169659702600149 4 12 3 16 3 gccaaatttg 918 0.169659702600149 4 12 3 16 3 gcccccaatg 919 0.169659702600149 4 12 3 16 3 NM_010135 refGene chr1 186002791 - 9208 graph_last l 7 40 tacgctgttc 920 0.169659702600149 5.5 11 2 14 2 NM_018774 refGene chr4 127665884 + 97362 graph_last l 13 55 tggccaagcc 921 0.169659702600149 5.5 11 2 14 2 NM_010847 refGene chr19 53323764 + 70500 graph_last 29 74 tgttccctct 922 0.169659702600149 5.5 11 2 14 2 NM_009668 refGene chr18 32621656 + 63661 graph_last l 84 207 ttcagggcgg 923 0.169659702600149 5.5 11 2 14 2 ttcctgtgtc 924 0.169659702600149 5.5 11 2 14 2 NM_026275 refGene chr4 41238380 + 92439 graph_last l 25 83 ttccttcagt 925 0.169659702600149 5.5 11 2 14 2 ccctcaccca 926 0.171957898216738 0.363636363636364 8 22 11 24 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 927 0.171957898216738 0.363636363636364 8 22 11 24 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 928 0.172101409309733 0.416666666666667 10 24 13 26 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 929 0.172101409309733 0.416666666666667 10 24 13 26 taaaaaaaaa 930 0.172309042843222 0.666666666666667 56 84 73 93 atagaggcaa 931 0.175810769442875 0.526315789473684 20 38 26 42 NM_198163 refGene chr5 114768497 + 106277 graph_last l 77 143 ttaacactgt 932 0.178707831043156 0.333333333333333 5 15 6 17 BC051169 knownGene chr15 28595290 - 45887 graph_last l 15 58 tttacacagt 933 0.178707831043156 0.333333333333333 5 15 6 17 tttcattgtt 934 0.178707831043156 0.333333333333333 5 15 6 17 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 935 0.183591757425762 3 18 6 24 7 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 936 0.196282999641744 1.53846153846154 80 52 104 58 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 937 0.201836819925349 0.352941176470588 6 17 8 19 NM_029979 refGene chr14 58039927 + 42269 graph_last l 27 94 tttgctgtgt 938 0.201836819925349 0.352941176470588 6 17 8 19 ggatttggct 939 0.202504184890304 0.788018433179724 171 217 224 240 NM_153407 refGene chr15 102453833 + 50072 graph_last l 24 68 aagcactggt 940 0.203163356715986 0.285714285714286 4 14 5 15 agaaataaaa 941 0.203163356715986 0.285714285714286 4 14 5 15 NM_053078 refGene chr18 33627973 + 63718 graph_last 0 18 ggtaaaatat 942 0.203163356715986 0.285714285714286 4 14 5 15 NM_199310 refGene chr2 119288454 - 78348 graph_last l 37 89 taaagtttga 943 0.203163356715986 0.285714285714286 4 14 5 15 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 944 0.203163356715986 0.285714285714286 4 14 5 15 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 945 0.203533361347193 2.06666666666667 31 15 41 17 aatacttttg 946 0.203533361347193 0.4 8 20 10 22 BE632211 all_est chrUn_random 7803125 + 142887 graph_last 0 698 ctgcggcttc 947 0.203533361347193 0.5 15 30 19 33 NM_172768 refGene chr9 41413125 - 136743 graph_last l 39 128 gaagtccagt 948 0.203533361347193 0.4 8 20 10 22 NM_009782 refGene chr1 157842554 - 7363 graph_last l 34 121 ttggtcaggt 949 0.203533361347193 0.4 8 20 10 22 attgtttatg 950 0.206860496135004 0.658227848101266 52 79 68 87 tgtgttgaga 951 0.207775029955578 3.4 17 5 22 6 NM_198894 refGene chr11 75988055 - 21730 graph_last l 94 280 tgagagggaa 952 0.209416571354777 0.515151515151515 17 33 22 37 atgtagtagt 953 0.216499474470138 0.58695652173913 27 46 35 51 BQ550972 all_est chr14 33819801 - 40573 graph_second 0 46 aaactgactt 954 0.229264608798357 0.25 3 12 4 13 aagagttatg 955 0.229264608798357 0.25 3 12 4 13 NM_133964 refGene chr10 83760581 + 14204 graph_last l 17 74 aataaaataa 956 0.229264608798357 0.25 3 12 4 13 acacttgcta 957 0.229264608798357 0.25 3 12 4 13 NM_173364 refGene chr9 125233362 - 142346 graph_last l 15 50 acataagagt 958 0.229264608798357 0.25 3 12 4 13 caaaagaatt 959 0.229264608798357 0.25 3 12 4 13 NM_025351 refGene chr6 90834203 - 114882 graph_last b 56 105 ctcgagaaac 960 0.229264608798357 0.25 3 12 4 13 NM_177616 refGene chr11 4039068 + 17252 graph_last l 3 33 gaatctattt 961 0.229264608798357 0.25 3 12 4 13 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 962 0.229264608798357 0.25 3 12 4 13 NM_145542 refGene chr3 110802401 - 88234 graph_last l 44 121 taacaaagga 963 0.229264608798357 0.25 3 12 4 13 NM_013608 refGene chr10 131323738 + 16744 graph_last l 94 328 tcgcaagcaa 964 0.229264608798357 1.80952380952381 38 21 50 23 tttttgtaca 965 0.229264608798357 0.25 3 12 4 13 aaaaagtacc 966 0.229500375670249 8 8 1 10 1 aaaatattga 967 0.229500375670249 0.142857142857143 1 7 1 8 aaactggaat 968 0.229500375670249 8 8 1 10 1 AA655495 all_est chr15 79783783 + 48321 graph_last l 53 168 aaataaagct 969 0.229500375670249 0.3125 5 16 7 18 NM_008717 refGene chr6 85114131 - 114381 graph_last 1 6 aatatgcttt 970 0.229500375670249 0.142857142857143 1 7 1 8 NM_172512 refGene chr3 97919899 + 87291 graph_last 2 15 acaaaatcac 971 0.229500375670249 0.142857142857143 1 7 1 8 NM_153595 refGene chr10 89036907 + 14566 graph_last 19 42 acaagatttt 972 0.229500375670249 0.142857142857143 1 7 1 8 acatttacaa 973 0.229500375670249 0.142857142857143 1 7 1 8 NM_009846 refGene chr10 45183750 - 12083 graph_last 1 11 agaagttact 974 0.229500375670249 0.142857142857143 1 7 1 8 NM_016711 refGene chr9 78100348 - 139564 graph_last l 18 77 agaagttagt 975 0.229500375670249 8 8 1 10 1 NM_016747 refGene chrX 90655077 + 150286 graph_last l 42 100 ataatagttg 976 0.229500375670249 0.3125 5 16 7 18 atatttttaa 977 0.229500375670249 0.142857142857143 1 7 1 8 atgatgctgt 978 0.229500375670249 0.142857142857143 1 7 1 8 NM_153552 refGene chr18 10196917 + 62758 graph_last l 9 34 caacaactga 979 0.229500375670249 0.142857142857143 1 7 1 8 cacaacgccg 980 0.229500375670249 8 8 1 10 1 cagaggaagg 981 0.229500375670249 8 8 1 10 1 cagcgagctg 982 0.229500375670249 8 8 1 10 1 cctttgatcc 983 0.229500375670249 8 8 1 10 1 NM_008541 refGene chr13 56515654 + 35272 graph_last 2 16 cctttgattc 984 0.229500375670249 8 8 1 10 1 NM_009041 refGene chr9 54126623 + 137643 graph_last l 9 39 cgaaggagaa 985 0.229500375670249 8 8 1 10 1 AK122380 knownGene chr8 84801596 + 131761 graph_last l 67 149 ctacagttcc 986 0.229500375670249 3 15 5 19 5 NM_009803 refGene chr1 175076870 - 8438 graph_last l 16 77 gaaagaggga 987 0.229500375670249 0.3125 5 16 7 18 gagcccatca 988 0.229500375670249 8 8 1 10 1 NM_019400 refGene chr11 70512333 + 21202 graph_last l 2 49 gcaagcaaaa 989 0.229500375670249 8 8 1 10 1 NM_031879 refGene chr9 85659183 - 139904 graph_last l 6 22 gcacagtgat 990 0.229500375670249 8 8 1 10 1 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 991 0.229500375670249 1.47368421052632 84 57 110 63 gcagagacat 992 0.229500375670249 0.142857142857143 1 7 1 8 gccagaaggc 993 0.229500375670249 0.142857142857143 1 7 1 8 BE847433 all_est chr11 82852395 - 22348 graph_last 3 18 gcgctctgca 994 0.229500375670249 8 8 1 10 1 gcggcggggc 995 0.229500375670249 3 15 5 19 5 gctctagtct 996 0.229500375670249 0.142857142857143 1 7 1 8 NM_011949 refGene chr16 16652805 + 51861 graph_last l 28 70 gctctgtatc 997 0.229500375670249 0.142857142857143 1 7 1 8 ggatttggag 998 0.229500375670249 0.142857142857143 1 7 1 8 NM_025284 refGene chr6 73997132 - 113918 graph_last 2 10 gggaaatcgc 999 0.229500375670249 0.142857142857143 1 7 1 8 NM_145939 refGene chr16 20229070 - 52176 graph_last 1 32 ggtggaacgg 1000 0.229500375670249 8 8 1 10 1 ggttaaaata 1001 0.229500375670249 0.142857142857143 1 7 1 8 NM_138596 refGene chr13 67123813 + 35924 graph_last l 17 106 ggtttcaact 1002 0.229500375670249 2.71428571428571 19 7 25 8 gtatactgta 1003 0.229500375670249 0.142857142857143 1 7 1 8 NM_020601 refGene chrX 67445347 + 149423 graph_last l 4 27 gtcctctttc 1004 0.229500375670249 0.142857142857143 1 7 1 8 gtcgcaggca 1005 0.229500375670249 3 15 5 19 5 NM_016959 refGene chr3 88105443 + 86463 graph_last 3 19 gtgccgaccg 1006 0.229500375670249 8 8 1 10 1 NM_008297 refGene chr10 59695541 + 12599 graph_last 0 13 gtggaaaatg 1007 0.229500375670249 0.142857142857143 1 7 1 8 NM_016743 refGene chr15 97285350 + 49595 graph_last l 127 271 gttacgtaac 1008 0.229500375670249 0.388888888888889 7 18 9 20 gttgtctttg 1009 0.229500375670249 0.388888888888889 7 18 9 20 NM_009270 refGene chr15 60667135 + 47298 graph_last l 22 61 taaatataag 1010 0.229500375670249 0.142857142857143 1 7 1 8 taacaagtta 1011 0.229500375670249 0.142857142857143 1 7 1 8 NM_198111 refGene chr12 48649939 + 27846 graph_last l 44 78 tagagaggtg 1012 0.229500375670249 0.142857142857143 1 7 1 8 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 1013 0.229500375670249 0.3125 5 16 7 18 tcagacgcgg 1014 0.229500375670249 8 8 1 10 1 tcctgctttc 1015 0.229500375670249 0.142857142857143 1 7 1 8 NM_018770 refGene chr9 49856825 + 137345 graph_second l 11 56 tcgttgaaag 1016 0.229500375670249 8 8 1 10 1 genomic chr10 82467785 - 0 unique_long l 4 27 tctcattttc 1017 0.229500375670249 8 8 1 10 1 AK129151 knownGene chr3 104498123 - 87776 graph_last 2 28 tgcagtcagt 1018 0.229500375670249 8 8 1 10 1 NM_198246 refGene chr16 15912011 + 51816 graph_last l 10 33 tgcatttcaa 1019 0.229500375670249 0.142857142857143 1 7 1 8 tgcgtaaaaa 1020 0.229500375670249 0.142857142857143 1 7 1 8 tgctgccatt 1021 0.229500375670249 8 8 1 10 1 genomic chr16 38275026 + 0 unique_long l 8 26 tggtgatgcg 1022 0.229500375670249 8 8 1 10 1 NM_134042 refGene chr12 80397690 - 29736 graph_last l 26 48 tgtggacagt 1023 0.229500375670249 0.142857142857143 1 7 1 8 NM_175134 refGene chr15 37287708 + 46308 graph_last l 86 224 tgttccacac 1024 0.229500375670249 0.3125 5 16 7 18 tgtttttgtt 1025 0.229500375670249 0.142857142857143 1 7 1 8 NM_145452 refGene chr13 83308299 - 36558 graph_last l 6 21 ttacccattt 1026 0.229500375670249 0.142857142857143 1 7 1 8 ttatatagtg 1027 0.229500375670249 8 8 1 10 1 NM_027287 refGene chr3 156136611 + 90410 graph_second 1 13 ttcaaggata 1028 0.229500375670249 8 8 1 10 1 NM_026977 refGene chr1 76698301 + 3685 graph_last l 39 78 ttctcttctc 1029 0.229500375670249 0.142857142857143 1 7 1 8 NM_011846 refGene chr5 128518388 - 107227 graph_last l 27 59 ttgtccacca 1030 0.229500375670249 0.142857142857143 1 7 1 8 NM_178934 refGene chr10 23580682 + 10941 graph_last l 3 12 tttctgaaca 1031 0.229500375670249 0.142857142857143 1 7 1 8 ttttatggaa 1032 0.229500375670249 8 8 1 10 1 NM_008737 refGene chr8 130398440 + 134614 graph_last l 4 14 ttttgtaccc 1033 0.229500375670249 8 8 1 10 1 gatttctgtc 1034 0.229804390130779 0.380952380952381 8 21 11 23 BY534359 all_est chrX 84532804 + 150025 graph_last 0 72 tgagagaaaa 1035 0.229804390130779 0.380952380952381 8 21 11 23 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 1036 0.230945662027326 2.18181818181818 24 11 32 12 NM_177589 refGene chr9 123344210 + 142205 graph_last l 53 134 tttttgaaca 1037 0.230945662027326 2.18181818181818 24 11 32 12 BC031849 knownGene chr13 71875683 - 36100 graph_last l 20 141 tagtagtgga 1038 0.231953123754170 3.25 13 4 17 4 tcgagcagtt 1039 0.231953123754170 3.25 13 4 17 4 NM_025407 refGene chr9 111570399 + 141448 graph_last l 67 280 ttctggctgc 1040 0.231953123754170 3.25 13 4 17 4 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 1041 0.234055948773570 0.552631578947368 21 38 27 42 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 1042 0.234393667967954 0.5 16 32 21 35 NM_133352 refGene chr19 41277237 - 69785 graph_last 18 66 aaacattggg 1043 0.241967718311839 0.2 2 10 3 11 NM_010497 refGene chr1 66764681 + 3174 graph_last 1 20 acagttaatt 1044 0.241967718311839 0.2 2 10 3 11 NM_010160 refGene chr2 6465097 - 71738 graph_last l 17 51 acatttattg 1045 0.241967718311839 0.2 2 10 3 11 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 1046 0.241967718311839 0.2 2 10 3 11 NM_009383 refGene chr7 120685858 - 125323 graph_last l 10 44 caaggaaatg 1047 0.241967718311839 0.2 2 10 3 11 gaaataaatg 1048 0.241967718311839 0.2 2 10 3 11 NM_023873 refGene chr9 101742563 - 140690 graph_last 1 19 gagtgaaata 1049 0.241967718311839 0.2 2 10 3 11 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 1050 0.241967718311839 0.2 2 10 3 11 NM_011252 refGene chrX 47027902 - 148647 graph_last l 3 21 ggcaatatta 1051 0.241967718311839 0.2 2 10 3 11 NM_008853 refGene chrX 89302940 - 150228 graph_last l 34 113 ggttaatgtt 1052 0.241967718311839 0.2 2 10 3 11 tgtgaaagca 1053 0.241967718311839 0.2 2 10 3 11 NM_053187 refGene chr10 54311526 - 12388 graph_last l 2 11 ttaactggta 1054 0.241967718311839 0.2 2 10 3 11 NM_177788 refGene chr8 106790089 - 132945 graph_last l 6 23 ttagtcttgg 1055 0.241967718311839 0.2 2 10 3 11 ttccttttgt 1056 0.241967718311839 0.2 2 10 3 11 atgatggtag 1057 0.242176019954449 3.66666666666667 11 3 15 3 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 1058 0.242176019954449 3.66666666666667 11 3 15 3 gtgcatccag 1059 0.242176019954449 3.66666666666667 11 3 15 3 NM_027539 refGene chr3 88863744 - 86520 graph_last l 6 58 gtgctccctg 1060 0.242176019954449 3.66666666666667 11 3 15 3 NM_025569 refGene chr1 171092134 - 8228 graph_last l 33 89 tacagcacag 1061 0.242176019954449 3.66666666666667 11 3 15 3 gttgaaatta 1062 0.242559771731123 3 18 6 23 7 NM_009672 refGene chr9 64726839 + 138431 graph_last l 35 106 tacctcgatg 1063 0.242559771731123 3 18 6 23 7 NM_025543 refGene chr2 153430747 + 80394 graph_last l 9 22 aagacaatac 1064 0.243907756075803 0.222222222222222 2 9 2 10 NM_153581 refGene chr8 55141907 - 130191 graph_last l 13 35 actagtagtt 1065 0.243907756075803 0.222222222222222 2 9 2 10 NM_144846 refGene chr15 65243265 - 47497 graph_last l 13 52 agaaaagtat 1066 0.243907756075803 0.222222222222222 2 9 2 10 NM_026648 refGene chr8 121477835 - 133909 graph_last l 16 42 agcagatggt 1067 0.243907756075803 0.222222222222222 2 9 2 10 NM_133999 refGene chr10 42717102 - 11882 graph_last l 36 64 caaatgacta 1068 0.243907756075803 0.222222222222222 2 9 2 10 NM_026213 refGene chr15 5250696 - 45004 graph_last l 21 53 cagatgtatg 1069 0.243907756075803 0.222222222222222 2 9 2 10 NM_172441 refGene chrX 140902981 - 152206 graph_last l 15 44 cttgatgctt 1070 0.243907756075803 0.222222222222222 2 9 2 10 NM_145927 refGene chr12 72869915 - 29105 graph_last l 8 33 gaaataaaga 1071 0.243907756075803 0.222222222222222 2 9 2 10 gaatagtaat 1072 0.243907756075803 0.222222222222222 2 9 2 10 AK014408 knownGene chr11 44190442 + 19304 graph_last l 42 79 gctacaggta 1073 0.243907756075803 0.222222222222222 2 9 2 10 AK129231 knownGene chr14 94761651 + 43740 graph_last l 13 42 gcttgtatac 1074 0.243907756075803 0.222222222222222 2 9 2 10 NM_145393 refGene chr4 130860643 - 97687 graph_last 13 40 tagtgaatgt 1075 0.243907756075803 0.222222222222222 2 9 2 10 NM_144912 refGene chr5 121388374 - 106736 graph_last l 23 67 tatgggatag 1076 0.243907756075803 0.222222222222222 2 9 2 10 genomic chr12 3277651 + 0 unique_long l 10 36 tatttattga 1077 0.243907756075803 0.222222222222222 2 9 2 10 NM_178242 refGene chr5 141719479 + 108235 graph_last 1 19 agcctggcgg 1078 0.245449715913626 5 10 2 13 2 NM_013514 refGene chr14 62156344 - 42537 graph_last l 146 324 ctgggagggg 1079 0.245449715913626 0.357142857142857 5 14 6 16 NM_031404 refGene chr5 135974053 + 107867 graph_last l 15 82 gaacgcaagt 1080 0.245449715913626 5 10 2 13 2 gaccgtggtg 1081 0.245449715913626 5 10 2 13 2 gactgcccct 1082 0.245449715913626 5 10 2 13 2 NM_026545 refGene chr7_random 31657657 - 127155 graph_last l 29 65 gagggtagct 1083 0.245449715913626 5 10 2 13 2 AK077572 knownGene chr19 38237960 - 69610 graph_last l 21 51 gagtgattgt 1084 0.245449715913626 5 10 2 13 2 gtactgacat 1085 0.245449715913626 5 10 2 13 2 taaatgtcct 1086 0.245449715913626 0.357142857142857 5 14 6 16 NM_172691 refGene chr4 42317899 - 92612 graph_last l 68 126 taataaagtg 1087 0.245449715913626 0.357142857142857 5 14 6 16 genomic chr13 54365790 + 0 unique_long l 16 52 tacaattgtc 1088 0.245449715913626 0.357142857142857 5 14 6 16 tctgtaattg 1089 0.245449715913626 0.357142857142857 5 14 6 16 NM_010207 refGene chr7_random 27126424 - 127060 graph_last 0 21 ttcataaaaa 1090 0.245449715913626 0.357142857142857 5 14 6 16 NM_021399 refGene chr12 103478142 - 31002 graph_last l 7 26 aaaaagtggc 1091 0.247072218408169 Inf 5 0 7 0 aaaactctgc 1092 0.247072218408169 Inf 5 0 7 0 NM_182990 refGene chr2 85411947 + 76355 graph_last l 9 24 aaagagtatg 1093 0.247072218408169 Inf 5 0 7 0 aaattccttt 1094 0.247072218408169 Inf 5 0 7 0 AK030904 knownGene chr5 123271466 + 106963 graph_last 9 21 aactaggaag 1095 0.247072218408169 Inf 5 0 7 0 genomic chr9 44684175 - 0 unique_long l 7 35 aaggagagtt 1096 0.247072218408169 Inf 5 0 7 0 NM_009089 refGene chr11 69305426 - 21057 graph_last l 6 18 aaggtctctg 1097 0.247072218408169 Inf 5 0 7 0 NM_023773 refGene chr14 47792880 + 41490 graph_last 13 43 aagtgcgagg 1098 0.247072218408169 Inf 5 0 7 0 aagttcgatg 1099 0.247072218408169 2.5 20 8 26 9 NM_019707 refGene chr8 121032700 + 133851 graph_last 11 59 acgaacatca 1100 0.247072218408169 Inf 5 0 7 0 acgtagaccc 1101 0.247072218408169 Inf 5 0 7 0 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 1102 0.247072218408169 Inf 5 0 7 0 NM_024196 refGene chr2 153056636 + 80355 graph_last l 8 26 agctcagggt 1103 0.247072218408169 Inf 5 0 7 0 AA591962 all_est chr18 77484755 - 66217 graph_last l 3 15 agtgcctttg 1104 0.247072218408169 Inf 5 0 7 0 agttcaaggc 1105 0.247072218408169 Inf 5 0 7 0 atacttgaca 1106 0.247072218408169 Inf 5 0 7 0 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 1107 0.247072218408169 2.5 20 8 26 9 atggaaagga 1108 0.247072218408169 Inf 5 0 7 0 atttttcttt 1109 0.247072218408169 0.409090909090909 9 22 12 24 caaatcagaa 1110 0.247072218408169 Inf 5 0 7 0 NM_133789 refGene chr7 13884301 + 119095 graph_second 1 8 cagtggcctg 1111 0.247072218408169 Inf 5 0 7 0 NM_023130 refGene chr2 155492314 + 80608 graph_last l 18 107 cattcttcct 1112 0.247072218408169 0.409090909090909 9 22 12 24 ccaggggctt 1113 0.247072218408169 Inf 5 0 7 0 NM_021273 refGene chr12 107237164 - 31356 graph_second 7 24 cccatccaac 1114 0.247072218408169 Inf 5 0 7 0 NM_017392 refGene chr3 111531621 - 88311 graph_last l 11 42 ccccaatcct 1115 0.247072218408169 Inf 5 0 7 0 NM_145979 refGene chr6 127048350 + 116948 graph_second s 1 12 cccgaactgg 1116 0.247072218408169 Inf 5 0 7 0 NM_010788 refGene chrX 63633178 - 149222 graph_last l 13 29 ccctcctaaa 1117 0.247072218408169 Inf 5 0 7 0 NM_172948 refGene chr11 116492047 + 25261 graph_second 0 9 ccggccaggc 1118 0.247072218408169 Inf 5 0 7 0 genomic chr4 136999969 + 0 unique_long l 13 41 cctatacgtc 1119 0.247072218408169 Inf 5 0 7 0 NM_138749 refGene chr15 90824776 - 49240 graph_last l 11 31 cgggacccca 1120 0.247072218408169 Inf 5 0 7 0 NM_025301 refGene chr7 97942114 - 123913 graph_last l 27 54 cgtatggctg 1121 0.247072218408169 Inf 5 0 7 0 NM_138670 refGene chr15 79758143 + 48320 graph_last l 5 20 cgtgcccagc 1122 0.247072218408169 Inf 5 0 7 0 ctgcagaaag 1123 0.247072218408169 Inf 5 0 7 0 NM_020494 refGene chr12 98979953 - 30809 graph_last 0 13 ctttgctgtg 1124 0.247072218408169 Inf 5 0 7 0 gaacccaaca 1125 0.247072218408169 Inf 5 0 7 0 NM_010948 refGene chr4 132418597 - 97881 graph_last 4 11 gaccagcacc 1126 0.247072218408169 Inf 5 0 7 0 NM_031408 refGene chr5_random 31025212 + 109595 graph_last l 13 32 gacccttggg 1127 0.247072218408169 Inf 5 0 7 0 NM_053272 refGene chr4 105446521 + 95749 graph_last l 15 34 gacctgctct 1128 0.247072218408169 Inf 5 0 7 0 NM_026552 refGene chr6 115145019 + 116125 graph_second 5 13 gaggagatcg 1129 0.247072218408169 Inf 5 0 7 0 NM_008162 refGene chr10 82359503 + 14033 graph_last l 10 22 gaggagcccc 1130 0.247072218408169 Inf 5 0 7 0 NM_011308 refGene chr11 61888988 - 20613 graph_last l 3 22 gatgaggaag 1131 0.247072218408169 Inf 5 0 7 0 NM_008791 refGene chr16 98535719 + 56369 graph_last l 36 102 gatgcaccag 1132 0.247072218408169 Inf 5 0 7 0 gcacagtatc 1133 0.247072218408169 Inf 5 0 7 0 NM_022022 refGene chr4 147441721 - 99270 graph_last l 7 23 gcccgacaac 1134 0.247072218408169 Inf 5 0 7 0 gccctgggcg 1135 0.247072218408169 Inf 5 0 7 0 NM_017477 refGene chr6 89361129 + 114740 graph_last l 11 24 gctaccgtga 1136 0.247072218408169 Inf 5 0 7 0 NM_145975 refGene chr13 55450172 + 35193 graph_last l 5 15 gctgcacccg 1137 0.247072218408169 Inf 5 0 7 0 AK044675 knownGene chr18 8346551 - 62672 graph_last l 15 42 ggacatctca 1138 0.247072218408169 Inf 5 0 7 0 AA756419 all_est chr12 106726625 - 31305 graph_last 0 11 gggagggggg 1139 0.247072218408169 Inf 5 0 7 0 NM_177618 refGene chr11 71360387 + 21233 graph_last l 19 58 ggggctggca 1140 0.247072218408169 Inf 5 0 7 0 gggggagagg 1141 0.247072218408169 Inf 5 0 7 0 NM_026664 refGene chr11 75792879 - 21685 graph_last 4 40 ggggtgcacg 1142 0.247072218408169 Inf 5 0 7 0 NM_175751 refGene chr18 55359822 - 65007 graph_last 2 13 gggttgccag 1143 0.247072218408169 Inf 5 0 7 0 NM_008802 refGene chr3 19156314 - 83355 graph_last l 10 22 ggtacaggat 1144 0.247072218408169 Inf 5 0 7 0 ggtcagggca 1145 0.247072218408169 Inf 5 0 7 0 NM_025645 refGene chr4_random 7308269 + 100008 graph_last l 6 14 ggtgagatcc 1146 0.247072218408169 Inf 5 0 7 0 NM_145979 refGene chr6 127028413 + 116948 graph_last l 5 16 gtgacagcta 1147 0.247072218408169 Inf 5 0 7 0 gtggagcacg 1148 0.247072218408169 Inf 5 0 7 0 NM_010731 refGene chr10 83522601 + 14167 graph_second l 29 88 gtgggatcga 1149 0.247072218408169 Inf 5 0 7 0 NM_011512 refGene chr2 27174856 - 72967 graph_last l 6 26 gtggtggccc 1150 0.247072218408169 Inf 5 0 7 0 gttggaaaca 1151 0.247072218408169 Inf 5 0 7 0 genomic chr3 90372519 + 0 unique_long l 6 16 gttgtctctt 1152 0.247072218408169 Inf 5 0 7 0 BC011319 knownGene chr7 29194797 - 120246 graph_last l 5 15 tagaaggtac 1153 0.247072218408169 Inf 5 0 7 0 genomic chr2 23371623 + 0 unique_long l 4 22 tatgcccatt 1154 0.247072218408169 Inf 5 0 7 0 genomic chr4 86566549 - 0 unique_long l 4 13 tcaaaagagc 1155 0.247072218408169 Inf 5 0 7 0 tctcgaaaaa 1156 0.247072218408169 Inf 5 0 7 0 NM_013884 refGene chr9 112846866 - 141548 graph_second 0 9 tctgcaccac 1157 0.247072218408169 Inf 5 0 7 0 tctgctggtg 1158 0.247072218408169 Inf 5 0 7 0 tgcccaggga 1159 0.247072218408169 Inf 5 0 7 0 tggcctccct 1160 0.247072218408169 Inf 5 0 7 0 tgggacgcca 1161 0.247072218408169 Inf 5 0 7 0 NM_172644 refGene chr1 164608706 - 7802 graph_last l 4 13 tgtaccatta 1162 0.247072218408169 Inf 5 0 7 0 tgtgtttgtg 1163 0.247072218408169 Inf 5 0 7 0 genomic chr2 147101673 + 0 unique_long l 7 18 ttagcagttg 1164 0.247072218408169 Inf 5 0 7 0 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 1165 0.247072218408169 0.6 30 50 39 55 tttgaaactg 1166 0.247072218408169 Inf 5 0 7 0 NM_009458 refGene chr11 51611562 + 19798 graph_second 1 5 aaaactccac 1167 0.248644955483897 0 0 5 0 5 genomic chr8 95252647 - 0 unique_long l 3 18 aaaactggct 1168 0.248644955483897 0 0 5 0 5 NM_177474 refGene chr19 27001190 - 68907 graph_last 0 16 aaaaggttaa 1169 0.248644955483897 0 0 5 0 5 genomic chr4 124067101 - 0 unique_long l 2 7 aaacagacga 1170 0.248644955483897 0 0 5 0 5 NM_172153 refGene chr5 44977508 + 102456 graph_last 0 25 aaagactgaa 1171 0.248644955483897 0 0 5 0 5 NM_011258 refGene chr5 64558724 - 103267 graph_last l 5 11 aaagatgtgt 1172 0.248644955483897 0 0 5 0 5 aaagtggaat 1173 0.248644955483897 0 0 5 0 5 NM_026254 refGene chr16 57620578 - 54476 graph_last l 9 25 aaattgcacc 1174 0.248644955483897 0 0 5 0 5 NM_183137 refGene chr11 119653277 + 25521 graph_last l 7 22 aagatgattt 1175 0.248644955483897 0 0 5 0 5 NM_144841 refGene chr14 40413884 + 40959 graph_second 0 8 aagatgtctg 1176 0.248644955483897 0 0 5 0 5 NM_009875 refGene chr6 136327145 + 117541 graph_second 0 6 aagcttattc 1177 0.248644955483897 0 0 5 0 5 aatataaaca 1178 0.248644955483897 0 0 5 0 5 aatgcacaaa 1179 0.248644955483897 0 0 5 0 5 NM_148958 refGene chr9 117606048 + 141869 graph_last l 6 14 aatgcttctc 1180 0.248644955483897 0 0 5 0 5 acacgtctat 1181 0.248644955483897 0 0 5 0 5 NM_025816 refGene chr6 53234427 + 112812 graph_last l 22 165 accactgata 1182 0.248644955483897 0.458333333333333 11 24 15 27 NM_021543 refGene chr14 71353583 + 43073 graph_second 6 14 acgaatcctt 1183 0.248644955483897 0 0 5 0 5 acttatacta 1184 0.248644955483897 0 0 5 0 5 NM_025914 refGene chr10 92066493 - 14731 graph_last 1 6 agaaagtgaa 1185 0.248644955483897 0 0 5 0 5 agaggaaaaa 1186 0.248644955483897 0 0 5 0 5 agaggctcgg 1187 0.248644955483897 0 0 5 0 5 agcttgatta 1188 0.248644955483897 0 0 5 0 5 NM_010721 refGene chr18 57123782 - 65070 graph_second 0 4 aggggagcgg 1189 0.248644955483897 0 0 5 0 5 NM_019713 refGene chr9 110205213 + 141255 graph_last l 7 20 aggggcctgt 1190 0.248644955483897 0 0 5 0 5 BB663194 all_est chr9 38040788 - 136498 graph_second 0 17 agtaatcaga 1191 0.248644955483897 0 0 5 0 5 agtaggaaag 1192 0.248644955483897 0 0 5 0 5 NM_026046 refGene chr7 10398993 + 118867 graph_last l 7 17 agtcacacac 1193 0.248644955483897 0 0 5 0 5 NM_009554 refGene chr4 60754322 - 93729 graph_last 4 11 agtcataact 1194 0.248644955483897 0 0 5 0 5 atagacgcaa 1195 0.248644955483897 0.595744680851064 28 47 37 52 atatacctac 1196 0.248644955483897 0 0 5 0 5 atctactgtg 1197 0.248644955483897 0 0 5 0 5 atgaaataaa 1198 0.248644955483897 0 0 5 0 5 AA718154 all_est chr14 70143955 - 42966 graph_last l 21 46 atgatgagag 1199 0.248644955483897 0 0 5 0 5 atgtctcaag 1200 0.248644955483897 0 0 5 0 5 attgtgtgtt 1201 0.248644955483897 0 0 5 0 5 NM_008883 refGene chrX 63947137 - 149251 graph_second 0 7 caacagaagg 1202 0.248644955483897 0 0 5 0 5 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 1203 0.248644955483897 0 0 5 0 5 cacaacttgt 1204 0.248644955483897 0 0 5 0 5 caccaccgtt 1205 0.248644955483897 1.41176470588235 96 68 125 75 caccccaccc 1206 0.248644955483897 0.307692307692308 4 13 5 14 AW743831 all_est chr3 119276241 - 88586 graph_last 1 6 cactacagta 1207 0.248644955483897 0 0 5 0 5 NM_023595 refGene chr2 125512553 + 78807 graph_last l 26 60 cagacttggt 1208 0.248644955483897 0.307692307692308 4 13 5 14 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 1209 0.248644955483897 0.545454545454545 18 33 23 37 NM_008923 refGene chr5 137286505 + 107983 graph_last l 6 32 cagcgcttgg 1210 0.248644955483897 0 0 5 0 5 NM_144846 refGene chr15 65245381 + 47497 graph_last 2 6 caggagaagc 1211 0.248644955483897 0 0 5 0 5 CD549273 all_est chr4 128745741 + 97527 graph_last 0 43 catctttaaa 1212 0.248644955483897 0 0 5 0 5 AI265079 all_est chr13 82379349 - 36514 graph_last 0 26 cattcaaaat 1213 0.248644955483897 0 0 5 0 5 ccacccctca 1214 0.248644955483897 0 0 5 0 5 ccacctgcac 1215 0.248644955483897 0 0 5 0 5 ccacgtgctg 1216 0.248644955483897 0 0 5 0 5 ccactgtgca 1217 0.248644955483897 0 0 5 0 5 ccatattcca 1218 0.248644955483897 0 0 5 0 5 ccctctaaaa 1219 0.248644955483897 0 0 5 0 5 cctgaatgac 1220 0.248644955483897 0.307692307692308 4 13 5 14 cgagagatcg 1221 0.248644955483897 0 0 5 0 5 NM_020009 refGene chr4 146670510 + 99166 graph_last l 13 33 cggggccaca 1222 0.248644955483897 0 0 5 0 5 BM114978 all_est chr9 125220213 + 142340 graph_last l 6 12 ctaatgtgac 1223 0.248644955483897 0 0 5 0 5 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 1224 0.248644955483897 0.481481481481481 13 27 17 30 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 1225 0.248644955483897 0.307692307692308 4 13 5 14 ctcttgcttt 1226 0.248644955483897 0 0 5 0 5 S74567 knownGene chr8 117404042 - 133731 graph_last l 7 15 cttctctttc 1227 0.248644955483897 0 0 5 0 5 NM_078478 refGene chr14 31666748 + 40471 graph_last l 3 9 ctttcaatta 1228 0.248644955483897 0 0 5 0 5 NM_023908 refGene chr7 66886393 - 122106 graph_last 2 12 gaatctgttt 1229 0.248644955483897 0 0 5 0 5 NM_145465 refGene chr14 114362617 + 44472 graph_last l 8 17 gaatgttttg 1230 0.248644955483897 0 0 5 0 5 AF008649 knownGene chr17 36825307 + 59106 graph_last l 173 341 gacagatgga 1231 0.248644955483897 0.375 6 16 8 18 NM_009457 refGene chrX 19235815 - 147564 graph_last l 6 12 gaccactgcc 1232 0.248644955483897 0 0 5 0 5 gacgctgcca 1233 0.248644955483897 0 0 5 0 5 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 1234 0.248644955483897 0.307692307692308 4 13 5 14 NM_027269 refGene chr12 65082496 + 28520 graph_last l 10 23 gacttgccag 1235 0.248644955483897 0 0 5 0 5 gagaatggct 1236 0.248644955483897 0 0 5 0 5 gagccaggtg 1237 0.248644955483897 0 0 5 0 5 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 1238 0.248644955483897 1.56756756756757 58 37 76 41 gaggacctgt 1239 0.248644955483897 0 0 5 0 5 genomic chr18 66302496 + 0 unique_long l 2 11 gatgtaatac 1240 0.248644955483897 0 0 5 0 5 gattagacac 1241 0.248644955483897 0 0 5 0 5 NM_023579 refGene chr14 114053640 - 44438 graph_last 2 5 gcagtccacc 1242 0.248644955483897 0 0 5 0 5 NM_011149 refGene chr9 68522695 + 138805 graph_last l 4 10 gccaatgcag 1243 0.248644955483897 0 0 5 0 5 NM_019879 refGene chr6 74327718 - 113942 graph_last 0 4 gcccatcctt 1244 0.248644955483897 0 0 5 0 5 NM_010717 refGene chr5 133484520 + 107627 graph_last 0 7 gccctcccac 1245 0.248644955483897 0 0 5 0 5 gctatgcaca 1246 0.248644955483897 0 0 5 0 5 genomic chr1 134827153 - 0 unique_long l 3 6 gctattgata 1247 0.248644955483897 0 0 5 0 5 NM_011501 refGene chr12 76155374 - 29362 graph_last l 10 23 gcttctcatt 1248 0.248644955483897 0 0 5 0 5 gcttctttta 1249 0.248644955483897 0 0 5 0 5 NM_172289 refGene chr9 15930739 + 135384 graph_last l 2 30 ggagaagagc 1250 0.248644955483897 0 0 5 0 5 ggagcgtggc 1251 0.248644955483897 0 0 5 0 5 BC044759 knownGene chr3 42077416 + 84512 graph_last 0 2 ggaggggtgg 1252 0.248644955483897 0 0 5 0 5 BY364131 all_est chr1 39112118 - 1680 graph_second 0 14 ggggaaaaaa 1253 0.248644955483897 0 0 5 0 5 NM_007728 refGene chr12 47283163 - 27767 graph_last 0 3 ggtcaaaata 1254 0.248644955483897 0 0 5 0 5 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 1255 0.248644955483897 0.307692307692308 4 13 5 14 NM_028710 refGene chr11 109236990 + 24794 graph_second 1 3 gtagcataaa 1256 0.248644955483897 0 0 5 0 5 NM_019796 refGene chr9 91414916 - 140127 graph_last 0 14 gtatcttaat 1257 0.248644955483897 0 0 5 0 5 NM_175317 refGene chr7 75132548 + 122607 graph_last l 5 14 gtctatatat 1258 0.248644955483897 0 0 5 0 5 NM_009450 refGene chr13 34018046 - 33852 graph_last l 5 20 gtctttctat 1259 0.248644955483897 0 0 5 0 5 gtggcgcaca 1260 0.248644955483897 3.2 16 5 21 6 NM_194462 refGene chr5 4094540 - 100160 graph_last 0 5 gtgtttcctt 1261 0.248644955483897 0 0 5 0 5 taaataaagg 1262 0.248644955483897 0 0 5 0 5 NM_016705 refGene chr15 92735278 + 49341 graph_last l 3 8 taaataagta 1263 0.248644955483897 0 0 5 0 5 NM_018864 refGene chr3 10449122 - 83055 graph_last l 27 45 taaattctat 1264 0.248644955483897 0 0 5 0 5 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 1265 0.248644955483897 0.421052631578947 8 19 10 21 taatatataa 1266 0.248644955483897 0 0 5 0 5 tacattttca 1267 0.248644955483897 0.55 22 40 29 44 NM_011216 refGene chr6 138902412 - 117675 graph_second 0 5 tactttaatc 1268 0.248644955483897 0 0 5 0 5 NM_177845 refGene chr2 120436803 - 78490 graph_last 0 4 tagagaacag 1269 0.248644955483897 0 0 5 0 5 NM_009876 refGene chr7 135531982 - 126263 graph_second 0 2 tagcaggaac 1270 0.248644955483897 0 0 5 0 5 NM_021491 refGene chr8 107733360 + 133057 graph_last 4 12 tagttcacca 1271 0.248644955483897 0 0 5 0 5 tataagtttt 1272 0.248644955483897 0 0 5 0 5 NM_007458 refGene chr7 37839274 - 120756 graph_second l 21 44 tatctcttct 1273 0.248644955483897 0 0 5 0 5 NM_198118 refGene chr6 54766185 + 112914 graph_last l 29 46 tattaaatac 1274 0.248644955483897 0 0 5 0 5 tcaagggtaa 1275 0.248644955483897 0 0 5 0 5 tcaatttgaa 1276 0.248644955483897 0 0 5 0 5 NM_152915 refGene chr1 86195373 + 4126 graph_second l 12 36 tcactacctc 1277 0.248644955483897 0 0 5 0 5 tcagggtaga 1278 0.248644955483897 0 0 5 0 5 tccctgtagt 1279 0.248644955483897 0 0 5 0 5 tctaacattt 1280 0.248644955483897 0 0 5 0 5 genomic chr7 112726468 - 0 unique_long l 2 8 tctgcctagt 1281 0.248644955483897 0 0 5 0 5 NM_138594 refGene chr6 128910271 + 117058 graph_last l 11 30 tgaaaatgtt 1282 0.248644955483897 0 0 5 0 5 NM_022004 refGene chr9 47132591 + 137214 graph_last 0 3 tgaacacctg 1283 0.248644955483897 0 0 5 0 5 NM_030886 refGene chr5 90740755 + 104585 graph_last l 8 24 tgagatatgt 1284 0.248644955483897 0 0 5 0 5 genomic chr5 3598247 + 0 unique_long l 3 7 tgccttctca 1285 0.248644955483897 0 0 5 0 5 tgctgaatca 1286 0.248644955483897 0.307692307692308 4 13 5 14 tggaacgata 1287 0.248644955483897 0 0 5 0 5 tggaataaac 1288 0.248644955483897 0 0 5 0 5 NM_008139 refGene chr19 16287290 - 68305 graph_last l 3 8 tggcagtata 1289 0.248644955483897 0 0 5 0 5 CB571293 all_est chr5 66799344 + 103524 graph_last 0 2 tggccttcta 1290 0.248644955483897 0 0 5 0 5 genomic chr3 158649290 - 0 unique_long l 6 13 tgggtgggtc 1291 0.248644955483897 0 0 5 0 5 NM_009466 refGene chr5 64716776 - 103290 graph_last 0 52 tgtagactgg 1292 0.248644955483897 0.307692307692308 4 13 5 14 NM_027000 refGene chr13 9157854 - 32500 graph_last l 11 23 tgtttgatat 1293 0.248644955483897 0 0 5 0 5 NM_054051 refGene chr11 97298827 - 23550 graph_last l 36 77 ttaaaaaaga 1294 0.248644955483897 0.307692307692308 4 13 5 14 BC046514 knownGene chr7 21199598 - 119611 graph_last l 3 20 ttataagtat 1295 0.248644955483897 0 0 5 0 5 AB101635 all_mrna chr5 80198434 - 104155 graph_last 3 18 ttataataca 1296 0.248644955483897 0 0 5 0 5 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 1297 0.248644955483897 0.307692307692308 4 13 5 14 ttcaatttca 1298 0.248644955483897 0 0 5 0 5 X57780 knownGene chrM 4160 - 142531 graph_last 18 49 ttcctagttg 1299 0.248644955483897 0 0 5 0 5 NM_198127 refGene chr1 62027750 + 2825 graph_last l 8 23 ttctgattaa 1300 0.248644955483897 0 0 5 0 5 ttgaaggcat 1301 0.248644955483897 0 0 5 0 5 BC055771 knownGene chrX 4828388 - 146945 graph_last l 8 16 ttgattatta 1302 0.248644955483897 0 0 5 0 5 NM_153198 refGene chr12 26576792 - 26904 graph_second 1 4 ttgtgaaatt 1303 0.248644955483897 0 0 5 0 5 NM_146128 refGene chr2 157390043 + 80791 graph_last l 129 258 ttgtgagaat 1304 0.248644955483897 0.5 15 30 20 33 NM_025884 refGene chr11 82337867 + 22289 graph_last 1 12 tttatatgac 1305 0.248644955483897 0 0 5 0 5 NM_133697 refGene chr5 64944333 - 103345 graph_last 6 18 tttatttaaa 1306 0.248644955483897 0 0 5 0 5 tttccaacta 1307 0.248644955483897 0 0 5 0 5 tttctaaaag 1308 0.248644955483897 0 0 5 0 5 tttgacagta 1309 0.248644955483897 0 0 5 0 5 NM_010890 refGene chr9 75259190 + 139403 graph_last 0 5 tttttaaatt 1310 0.248644955483897 0 0 5 0 5 ggatggggag 1311 0.248821747905939 0.69047619047619 58 84 76 93 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 1312 0.255107626228776 0.5 14 28 18 31 NM_133796 refGene chr11 120131623 - 25586 graph_last l 54 208 tgctctccct 1313 0.256767811309356 2.18181818181818 24 11 31 12 gtggctcata 1314 0.256986862608313 1.88235294117647 32 17 42 19 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 1315 0.259970982902062 2.8 14 5 18 5 NM_023312 refGene chr8 70094469 - 130862 graph_last l 90 351 aaggatgtgc 1316 0.259970982902062 2.8 14 5 18 5 NM_133733 refGene chr9 42365508 - 136826 graph_last 2 33 actggctcca 1317 0.259970982902062 2.8 14 5 18 5 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 1318 0.260713280500434 0.454545454545455 10 22 13 24 NM_007881 refGene chr6 126661781 - 116898 graph_last l 106 385 ggcctgcttc 1319 0.264471388667452 0.6 27 45 35 50 NM_024192 refGene chr19 46520451 - 70199 graph_last l 66 166 atggtggaca 1320 0.266216977129731 0.4 8 20 11 22 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 1321 0.266216977129731 0.4 8 20 11 22 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 1322 0.268947799719860 0.333333333333333 5 15 7 17 AK081003 knownGene chr13 87441680 + 36626 graph_last l 80 200 taggatgttg 1323 0.268947799719860 0.333333333333333 5 15 7 17 NM_146087 refGene chr18 61709666 + 65292 graph_last l 35 105 tatgtgtgtt 1324 0.268947799719860 0.333333333333333 5 15 7 17 agtggtcaag 1325 0.272151083321428 0.411764705882353 7 17 9 19 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 1326 0.272151083321428 0.411764705882353 7 17 9 19 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 1327 0.272151083321428 0.411764705882353 7 17 9 19 cagaacccac 1328 0.27354490719214 1.52380952380952 64 42 84 47 agatgtattt 1329 0.278327659562811 0.272727272727273 3 11 4 12 attaaagccc 1330 0.278327659562811 0.272727272727273 3 11 4 12 NM_030210 refGene chr5 124411318 + 107069 graph_last l 7 58 cacacctgta 1331 0.278327659562811 0.272727272727273 3 11 4 12 cccactgcct 1332 0.278327659562811 0.272727272727273 3 11 4 12 BB647300 all_est chr12 79131294 + 29599 graph_last l 4 31 ctggaaacag 1333 0.278327659562811 0.272727272727273 3 11 4 12 cttaaataaa 1334 0.278327659562811 0.272727272727273 3 11 4 12 gaaataaagt 1335 0.278327659562811 0.272727272727273 3 11 4 12 NM_010443 refGene chr16 4247339 - 51121 graph_last l 46 121 gcctcctatc 1336 0.278327659562811 0.272727272727273 3 11 4 12 NM_178655 refGene chr3 130442092 + 89080 graph_last 33 84 ggaacaagat 1337 0.278327659562811 0.272727272727273 3 11 4 12 NM_025411 refGene chr4 134755060 - 98104 graph_last l 63 145 gtgactaatg 1338 0.278327659562811 0.272727272727273 3 11 4 12 NM_013597 refGene chr7 59788733 + 121796 graph_last l 75 125 taaaaccgtt 1339 0.278327659562811 0.272727272727273 3 11 4 12 tatctgtccc 1340 0.278327659562811 0.272727272727273 3 11 4 12 tccctgactt 1341 0.278327659562811 0.272727272727273 3 11 4 12 NM_011247 refGene chr7 115067512 + 124908 graph_last l 12 31 ttcataaata 1342 0.278327659562811 0.272727272727273 3 11 4 12 ctgctatccg 1343 0.28052636472609 1.48936170212766 70 47 91 52 ttggctgccc 1344 0.281322524501871 1.41666666666667 85 60 111 66 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 1345 0.281907963392687 2 28 14 36 15 NM_008707 refGene chr11 102658151 - 24151 graph_last 1 40 ctccctgccc 1346 0.281907963392687 3 12 4 16 4 tcctgtgtca 1347 0.281907963392687 2 28 14 36 15 NM_009052 refGene chrX 124787029 - 151534 graph_last l 80 204 ggaagatccg 1348 0.291693137791538 0.478260869565217 11 23 14 25 NM_009338 refGene chr17 13166853 - 57147 graph_last l 38 141 ggaaaccacg 1349 0.298626623806298 2.375 19 8 25 9 NM_027901 refGene chr5 29494221 - 101565 graph_last l 7 26 aaggctcctg 1350 0.301426248496626 7 7 1 9 1 NM_177646 refGene chr1 89884374 - 4476 graph_last 0 22 cacacagtgg 1351 0.301426248496626 7 7 1 9 1 NM_015735 refGene chr19 10550968 + 68008 graph_last l 7 18 cagaaccgac 1352 0.301426248496626 7 7 1 9 1 ccagaacaga 1353 0.301426248496626 0.795811518324607 152 191 199 211 cccaggctct 1354 0.301426248496626 7 7 1 9 1 cctgcttcct 1355 0.301426248496626 7 7 1 9 1 ctcagtggca 1356 0.301426248496626 7 7 1 9 1 ctgggtgcct 1357 0.301426248496626 7 7 1 9 1 NM_028012 refGene chr13 88298230 + 36703 graph_last 4 25 gaatgagata 1358 0.301426248496626 7 7 1 9 1 NM_021485 refGene chr19 3957738 + 67379 graph_last l 8 37 gagaatgggg 1359 0.301426248496626 7 7 1 9 1 NM_134024 refGene chr11 100789952 + 23939 graph_last l 15 49 gagcagttcc 1360 0.301426248496626 7 7 1 9 1 gcagccccta 1361 0.301426248496626 7 7 1 9 1 gccagccagg 1362 0.301426248496626 7 7 1 9 1 gctgcagagt 1363 0.301426248496626 7 7 1 9 1 AK040979 all_mrna chr1 45458229 - 1989 graph_last 4 14 ggagatcttt 1364 0.301426248496626 7 7 1 9 1 genomic chr4 105908485 + 0 unique_long l 4 14 ggccttgggg 1365 0.301426248496626 7 7 1 9 1 ggggagtgga 1366 0.301426248496626 7 7 1 9 1 NM_011213 refGene chr4 117118087 - 96596 graph_last l 12 30 gggtgggaaa 1367 0.301426248496626 7 7 1 9 1 AK129151 knownGene chr3 104499438 + 87776 graph_last 2 22 ggtgtgggct 1368 0.301426248496626 7 7 1 9 1 NM_177608 refGene chr2 125992273 - 78837 graph_last l 36 72 gtgccaacag 1369 0.301426248496626 7 7 1 9 1 NM_144925 refGene chr7 115212428 + 124918 graph_last 13 39 gttctcagga 1370 0.301426248496626 7 7 1 9 1 tcagccccac 1371 0.301426248496626 7 7 1 9 1 AK032356 knownGene chr6 18309573 - 110671 graph_last b 8 28 tgcgacttcg 1372 0.301426248496626 7 7 1 9 1 NM_010433 refGene chr6 38788005 - 111912 graph_last l 9 46 tgggtctgtg 1373 0.301426248496626 7 7 1 9 1 BC054553 knownGene chr2 26195970 - 72894 graph_last 10 41 ttggccagct 1374 0.301426248496626 7 7 1 9 1 NM_019802 refGene chr6 73476551 - 113867 graph_last 4 80 aaacgaaagt 1375 0.302072460049689 3.66666666666667 11 3 14 3 NM_020027 refGene chr17 34814955 - 58932 graph_last 15 63 aaggggaaag 1376 0.302072460049689 3.66666666666667 11 3 14 3 NM_013540 refGene chr3 82541367 - 86190 graph_last l 2 21 atattgccag 1377 0.302072460049689 3.66666666666667 11 3 14 3 NM_145139 refGene chr15 80437860 + 48377 graph_last l 14 45 atccatattg 1378 0.302072460049689 3.66666666666667 11 3 14 3 NM_010906 refGene chr8 85570306 - 131845 graph_last l 14 48 cgcctctctc 1379 0.302072460049689 3.66666666666667 11 3 14 3 NM_008997 refGene chr17 33385280 - 58766 graph_last 20 98 ctggtgggca 1380 0.302072460049689 3.66666666666667 11 3 14 3 gcagcgtccg 1381 0.302072460049689 3.66666666666667 11 3 14 3 NM_009768 refGene chr10 82599398 + 14067 graph_last 103 233 gggagctgtg 1382 0.302072460049689 3.66666666666667 11 3 14 3 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 1383 0.302468085123939 0.428571428571429 9 21 12 23 NM_009543 refGene chr6 72451250 + 113754 graph_last l 3 20 aaattaaaac 1384 0.305031444664864 0.166666666666667 1 6 1 7 NM_025844 refGene chr9 18477078 + 135458 graph_last 3 50 aacttttgtt 1385 0.305031444664864 0.222222222222222 2 9 3 10 NM_026729 refGene chr11 114916501 + 25076 graph_last l 7 62 aatcactggc 1386 0.305031444664864 0.166666666666667 1 6 1 7 BB674281 all_est chr3 90690195 + 86687 graph_last 0 19 aattaatcaa 1387 0.305031444664864 0.222222222222222 2 9 3 10 BB754985 all_est chr6 122632802 - 116716 graph_last l 12 30 acccacaaga 1388 0.305031444664864 0.166666666666667 1 6 1 7 NM_133676 refGene chr14 42721147 - 41088 graph_last l 13 52 acgccacaat 1389 0.305031444664864 0.357142857142857 5 14 6 15 NM_007794 refGene chr8 107206516 + 132995 graph_last 1 27 agacctgtaa 1390 0.305031444664864 0.222222222222222 2 9 3 10 genomic chr14 48083563 + 0 unique_long l 3 27 agatattaa