gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.count COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 1 6.92725638159196e-244 0.0874125874125874 75 858 139 896 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 2 3.82424860197784e-184 0.058303886925795 33 566 60 591 tgggttgtct 3 2.23745249834963e-177 0.0903328050713154 57 631 105 659 NM_007807 refGene chrX 7985921 - 147160 graph_last 0 12115 ataatacata 4 1.82421522426484e-172 Inf 489 0 902 0 tcggacgtac 5 3.84845437650454e-126 Inf 359 0 663 0 tggatcagtc 6 3.08597513117068e-96 0.0980392156862745 35 357 65 373 gtgaaactaa 7 4.15431279578403e-84 0.060377358490566 16 265 30 277 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 8 1.51381667779569e-81 0.0053475935828877 1 187 1 195 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 9 1.76780467262869e-79 Inf 229 0 422 0 tgtagtgtaa 10 7.61737272602352e-78 0.179551122194514 72 401 132 419 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 11 1.826980762854e-75 59.5 238 4 439 4 gtggctcaca 12 1.78503856935753e-73 2.24087591240876 1228 548 2266 572 tgtactcaat 13 8.06818491900366e-72 0.0547945205479452 12 219 22 229 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 14 8.61683674639748e-70 9.35294117647059 318 34 587 35 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 15 5.98355128194121e-69 16.5625 265 16 490 17 ctagtctttg 16 4.00205229479818e-66 0.198369565217391 73 368 134 384 tgaccccggg 17 5.19066156016686e-63 0.149305555555556 43 288 79 301 NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 18 3.81624662091019e-59 177 177 1 327 1 agaaggaggt 19 9.8341706522651e-57 0.167857142857143 47 280 86 292 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 20 5.8414007117136e-56 20.4 204 10 376 10 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 21 2.10633377830605e-51 Inf 150 0 276 0 taaagaggcc 22 4.63492161708123e-49 0.109947643979058 21 191 38 199 caaaacaggc 23 3.81878927486054e-48 51.6666666666667 155 3 286 3 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 24 1.53913067168710e-46 12.25 196 16 362 17 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 25 1.24580986832244e-45 38 152 4 280 4 gtaagcataa 26 1.48651049379663e-45 0.153488372093023 33 215 61 224 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 27 5.49930167617784e-44 0.0743243243243243 11 148 20 154 gcctaatgta 28 1.09862494016106e-43 0.2109375 54 256 99 267 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 29 1.04045899057692e-41 0.0101010101010101 1 99 1 103 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 30 1.20343648148306e-41 0.129213483146067 23 178 43 186 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 31 7.34255644788424e-41 17.2222222222222 155 9 286 9 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 32 6.26775331207253e-40 63.5 127 2 234 2 aatgacctgg 33 1.15659568385705e-39 0.0353982300884956 4 113 8 118 cagcatcacc 34 1.22669008336109e-39 0.0277777777777778 3 108 6 113 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 35 1.49490215180455e-39 Inf 116 0 214 0 ggatttggct 36 1.49490215180455e-39 0.199095022624434 44 221 81 231 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 37 2.51103099175573e-39 33.25 133 4 246 4 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 38 7.24909872037894e-39 Inf 114 0 210 0 gtctgctgat 39 3.18536296597758e-38 0.111842105263158 17 152 32 159 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 40 3.43398115572749e-38 0.145348837209302 25 172 46 180 gattccgtga 41 4.38810189826864e-38 0.195238095238095 41 210 75 219 ggcttcggtc 42 1.85123668105360e-37 0.362745098039216 148 408 274 426 cccttcttct 43 4.18333507332837e-37 0.129032258064516 20 155 36 162 gtaagcaaaa 44 8.77951039772385e-37 0.119205298013245 18 151 34 158 aacaatttgg 45 3.06581162926512e-36 0.185567010309278 36 194 67 203 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 46 1.71805194151357e-35 7.32 183 25 337 26 ctgaacatct 47 2.90500379608133e-35 0.103703703703704 14 135 26 141 gtatttgcaa 48 5.86343806341526e-35 56 112 2 207 2 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 49 9.3721928856301e-35 0.0224719101123595 2 89 3 93 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 50 1.54376789958255e-34 0.141935483870968 22 155 41 162 attctccagt 51 1.61316029762965e-34 0.160714285714286 27 168 50 175 gctgccctcc 52 1.70229641410271e-34 Inf 101 0 187 0 cctttaatcc 53 1.99560555608288e-34 4.85106382978723 228 47 421 49 gaatgatctg 54 4.55340143461475e-34 0 0 78 0 81 genomic chr2 103005141 + 0 unique_long l 172 342 caggtgagcc 55 4.40057802735324e-33 Inf 98 0 180 0 aggcagacag 56 1.53359019507056e-32 0.35207100591716 119 338 220 353 atgtctcaaa 57 3.50662392389523e-32 0.336538461538462 105 312 194 326 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 58 5.29869961341767e-32 10.8461538461538 141 13 261 14 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 59 6.78742571512175e-32 0 0 73 0 76 tgtgtgaggt 60 2.03912901537981e-31 0.0246913580246914 2 81 3 85 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 61 4.87253777246918e-31 0.0948275862068965 11 116 21 121 gcaataaatg 62 7.10259354570607e-30 0.1328125 17 128 31 134 tttttaatgt 63 2.06966249259083e-29 0.148148148148148 20 135 37 141 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 64 2.60872053986097e-29 0.0259740259740260 2 77 3 80 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 65 2.72315092544923e-29 33.3333333333333 100 3 185 3 gaataataaa 66 9.17269064049694e-29 0.324528301886792 86 265 158 277 gccaagtgga 67 1.04006831200264e-28 0.206060606060606 34 165 62 172 gatgtggctg 68 1.16320939632718e-28 0.126050420168067 15 119 27 124 tcaaacttgg 69 2.48198895973916e-28 0.173611111111111 25 144 46 150 gggttggccg 70 2.90648786615006e-27 Inf 81 0 149 0 ttttatgttt 71 3.00618362135365e-27 0.159090909090909 21 132 39 138 ctaataaagc 72 7.74686938545661e-27 0.244444444444444 44 180 81 188 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 73 2.52206189676240e-26 Inf 78 0 144 0 atactgacat 74 2.77508292967521e-26 Inf 79 0 145 0 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 75 3.44472743032094e-26 3.90566037735849 207 53 382 55 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 76 9.26256838300625e-26 10.5454545454545 116 11 215 12 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 77 1.55714974747115e-25 6.26086956521739 144 23 265 24 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 78 1.55714974747115e-25 0.141592920353982 16 113 29 118 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 79 1.75937916722725e-25 0.0153846153846154 1 65 2 68 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 80 2.16194405786454e-25 0 0 58 0 61 gccttccaat 81 1.42859507249628e-24 0.205673758865248 29 141 53 147 NM_023051 refGene chr4 147761803 + 99301 graph_last l 204 510 tcctgtcccc 82 2.66745236136034e-24 9.5 114 12 210 13 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 83 3.05768786194022e-24 0.0169491525423729 1 59 1 62 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 84 3.30726937624398e-24 Inf 73 0 134 0 gtgacctggc 85 4.65084454631120e-24 76 76 1 141 1 X57780 knownGene chrM 119 + 142531 graph_second l 3651 6052 caaacctcca 86 4.95229838393106e-24 Inf 72 0 132 0 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 87 6.466930321356e-24 0.03125 2 64 3 67 ggcaagcccc 88 1.16627954277081e-23 0.289473684210526 55 190 101 198 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 89 2.11840478358354e-23 0.0175438596491228 1 57 1 60 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 90 3.22373431906919e-23 0.254658385093168 41 161 75 168 cctttgtgac 91 4.31226149217844e-23 9.72727272727273 107 11 198 12 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 92 6.3565790531109e-23 73 73 1 135 1 genomic chr4 137235203 - 0 unique_long l 168 283 tcacatccaa 93 6.45044519981664e-23 38.5 77 2 143 2 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 94 6.9720722648893e-23 0.215827338129496 30 139 56 145 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 95 9.3353928959141e-23 0.0875 7 80 12 83 aagaggcaag 96 1.92061317550497e-22 0.118279569892473 11 93 21 97 tgcccagtgc 97 1.92061317550497e-22 11.875 95 8 175 8 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 98 3.43257258805698e-22 0.212121212121212 28 132 52 138 aaaaaaaaaa 99 3.76163702867308e-22 0.408304498269896 118 289 217 302 ttggtgaagg 100 1.01859151387873e-21 0.414383561643836 121 292 223 305 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 101 1.41212798341900e-21 0.0987654320987654 8 81 15 85 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 102 1.42361402814241e-21 14.3333333333333 86 6 159 6 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 103 1.67985166782774e-21 0.219696969696970 29 132 54 138 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 104 2.28658142230920e-21 36.5 73 2 134 2 ctgtaggtga 105 2.54929356565740e-21 0.25 37 148 68 154 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 106 4.32773952533717e-21 0 0 49 0 51 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 107 4.94002221090837e-21 Inf 63 0 116 0 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 108 6.95829492383322e-21 67 67 1 124 1 acatcataga 109 2.68539049822159e-20 0.173076923076923 18 104 34 109 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 110 3.11925679234016e-20 34.5 69 2 128 2 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 111 3.66933279953664e-20 24.3333333333333 73 3 134 3 atagcagcac 112 6.69409278834572e-20 10.875 87 8 160 8 ggatggggag 113 8.86024429632313e-20 0.182692307692308 19 104 35 109 gcccgggaat 114 1.79065066993048e-19 0.418518518518519 113 270 209 282 gcccccctct 115 1.81693150046505e-19 10.625 85 8 157 8 gaggctttgc 116 4.45310648927125e-19 11.7142857142857 82 7 151 7 gctttgaatg 117 7.0342376192084e-19 0.173469387755102 17 98 32 102 tgtgccaagt 118 1.33201410246915e-18 0.177083333333333 17 96 31 100 tccctgtagt 119 1.47686938248092e-18 12.8333333333333 77 6 142 6 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 120 2.57090858470082e-18 0.0217391304347826 1 46 1 48 attgtttatg 121 5.72425309646089e-18 0.111111111111111 8 72 15 75 cacacacaca 122 1.16657717282811e-17 22 66 3 121 3 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 123 1.28847365462140e-17 0 0 41 0 43 NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 124 1.39117436173158e-17 14.2 71 5 131 5 gttgctgaga 125 2.26038535469279e-17 0.238938053097345 27 113 49 118 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 126 3.79522525552812e-17 0.0566037735849057 3 53 5 55 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 127 4.70876619487848e-17 Inf 52 0 96 0 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 128 5.68903451483939e-17 0.0819672131147541 5 61 10 64 tgtataaaaa 129 6.03532105144101e-17 0.231481481481481 25 108 46 113 aatttcaaaa 130 6.50858133567106e-17 0.15 12 80 22 83 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 131 6.58034606771229e-17 13.8 69 5 128 5 NM_007687 refGene chr19 5351164 + 67562 graph_last 686 2388 gaagcaggac 132 9.0375012383738e-17 0.438735177865613 111 253 205 264 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 133 1.21686813990641e-16 16.25 65 4 120 4 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 134 1.21686813990641e-16 16.25 65 4 120 4 aggaaggcgg 135 1.47966954000913e-16 0.245614035087719 28 114 52 119 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 136 1.55988743364485e-16 55 55 1 101 1 agcagtcccc 137 3.78780941047575e-16 Inf 49 0 91 0 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 138 6.76276670140635e-16 0.111111111111111 7 63 13 66 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 139 6.83906623338475e-16 Inf 49 0 90 0 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 140 9.06695865930692e-16 0.087719298245614 5 57 9 59 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 141 1.27554073340045e-15 0.0425531914893617 2 47 4 49 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 142 2.62222403179242e-15 0.0454545454545455 2 44 3 46 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 143 3.1786193205087e-15 Inf 47 0 86 0 NM_008740 refGene chr11 103486744 - 24251 graph_last l 109 193 ctaacagctg 144 4.01409950971582e-15 51 51 1 94 1 aaggtggaag 145 4.23170598266899e-15 0.195121951219512 16 82 29 86 cgctggttcc 146 4.38719826839528e-15 0.211111111111111 19 90 35 94 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 147 4.85987126421029e-15 0 0 35 0 37 NM_009692 refGene chr9 47988814 + 137297 graph_last 0 1015 gctttcttac 148 1.02837491925389e-14 Inf 46 0 84 0 cacaaacggt 149 1.24368380009671e-14 0.353333333333333 53 150 97 157 gtaaaaaaaa 150 1.35740199127623e-14 0.224719101123595 20 89 36 93 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 151 1.48814099613611e-14 0.173333333333333 13 75 24 78 tgaaataaac 152 1.49350005408605e-14 0.147058823529412 10 68 19 71 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 153 1.55426394416654e-14 0.162162162162162 12 74 23 77 agagtaatca 154 1.72189320330563e-14 0.118644067796610 7 59 13 62 accaatgaac 155 2.57606740956965e-14 Inf 44 0 81 0 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 156 2.57606740956965e-14 Inf 44 0 81 0 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 157 4.96328477587666e-14 14.25 57 4 105 4 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 158 6.33141742300484e-14 0.0961538461538462 5 52 9 54 ccccagccag 159 9.97037772680561e-14 0.295652173913043 34 115 63 120 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 160 1.22189535440663e-13 0.0476190476190476 2 42 4 44 NM_016852 refGene chr11 115584466 - 25162 graph_last l 127 187 tctgtcccgc 161 1.41068532070755e-13 46 46 1 85 1 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 162 1.61087536864283e-13 2.79310344827586 162 58 299 61 agagcgaagt 163 1.82203827634436e-13 0.271844660194175 28 103 52 107 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 164 3.16226781104672e-13 8.85714285714286 62 7 115 7 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 165 3.79144709377076e-13 Inf 41 0 75 0 gaaaaaaaaa 166 4.13649267344802e-13 0.176470588235294 12 68 22 71 tgactgggag 167 4.25540862434741e-13 11.4 57 5 105 5 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 168 4.91168310339938e-13 0.25 23 92 43 96 gggaagtctg 169 6.83987366942671e-13 0 0 31 0 32 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 170 6.83987366942671e-13 0 0 31 0 32 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 171 7.48592650895084e-13 0.0294117647058824 1 34 1 35 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 172 1.60306703298133e-12 13.25 53 4 97 4 cctttgagat 173 1.81838953369033e-12 0.104166666666667 5 48 9 50 cgccgccggc 174 2.52181770917503e-12 0.314814814814815 34 108 62 113 aggtcgggtg 175 2.63770045478112e-12 0.28125 27 96 49 100 ggaagccact 176 2.77286435115602e-12 0.379310344827586 55 145 102 151 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 177 3.08615453414633e-12 0.090909090909091 4 44 7 46 atgtagtagt 178 4.702169691196e-12 0.12 6 50 11 52 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 179 5.48201128352857e-12 Inf 37 0 69 0 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 180 6.22857251759047e-12 0.219178082191781 16 73 29 76 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 181 7.49389151914993e-12 4.52631578947368 86 19 158 20 aggatctcag 182 9.58943637596744e-12 Inf 36 0 67 0 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 183 9.895624393107e-12 22 44 2 81 2 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 184 1.1038010113824e-11 0.0540540540540541 2 37 4 39 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 185 1.14066911313103e-11 0.172413793103448 10 58 18 61 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 186 1.52386435449005e-11 40 40 1 74 1 NM_174998 refGene chr4 122151861 + 96906 graph_last l 199 320 ctgcttctaa 187 1.91934779678173e-11 12.25 49 4 91 4 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 188 2.12184228468600e-11 8 56 7 104 7 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 189 2.13255045833270e-11 0.0303030303030303 1 33 2 34 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 190 2.14565511992232e-11 0.280898876404494 25 89 46 93 NM_172882 refGene chr5 101135739 - 105200 graph_last 0 4542 atgactgata 191 2.59137430137980e-11 Inf 35 0 65 0 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 192 2.61194804214767e-11 6.09090909090909 67 11 124 12 tgacaatttt 193 2.64687771585273e-11 0.0555555555555556 2 36 4 38 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 194 3.90156083356026e-11 0.358333333333333 43 120 79 125 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 195 4.28380006655375e-11 4.09523809523809 86 21 159 22 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 196 4.40792204975331e-11 Inf 35 0 64 0 tattggctct 197 4.64981522907020e-11 2.88636363636364 127 44 234 46 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 198 4.97540974978412e-11 5.81818181818182 64 11 119 11 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 199 5.30203839264131e-11 0.03125 1 32 2 33 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 200 6.96405882253474e-11 38 38 1 70 1 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 201 8.1648051238044e-11 2.19540229885057 191 87 353 91 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 202 8.20332921778968e-11 0.163636363636364 9 55 17 57 NM_029186 refGene chr19 46557251 + 70202 graph_last 0 457 ggccgctgct 203 8.28426905634819e-11 0.186440677966102 11 59 21 62 aaataaagat 204 8.4630134108421e-11 9.8 49 5 91 5 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 205 8.4630134108421e-11 7.71428571428571 54 7 100 7 gctccctctg 206 1.06430702830652e-10 0.116279069767442 5 43 9 45 NM_009790 refGene chr12 95767982 + 30604 graph_last l 461 1256 acaaacttag 207 1.11048063235459e-10 2.59259259259259 140 54 258 56 gcacaacttg 208 1.14312537443078e-10 0.413793103448276 60 145 110 151 aagaaaatag 209 1.31714648778871e-10 0.2 12 60 22 63 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 210 1.33277442522397e-10 9.8 49 5 90 5 NM_144513 refGene chr12 105130773 + 31142 graph_last l 111 152 caaagagaac 211 1.36223948492797e-10 Inf 34 0 62 0 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 212 1.61293566701831e-10 0.189655172413793 11 58 21 61 NM_011221 refGene chr11 6368235 - 17495 graph_last l 75 170 gtttctcagg 213 2.09070450555437e-10 Inf 33 0 60 0 gcttttgtta 214 2.14876421123088e-10 9.6 48 5 89 5 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 215 2.24320747184019e-10 0.0357142857142857 1 28 1 29 taatatttaa 216 3.30046594744145e-10 36 36 1 66 1 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 217 3.79259710294668e-10 0.0625 2 32 3 33 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 218 5.28847871597312e-10 0.148936170212766 7 47 13 49 cctttatttc 219 5.40924855856603e-10 35 35 1 65 1 tgtaaaataa 220 5.4299635122858e-10 19 38 2 71 2 cccccagcag 221 6.11641842750387e-10 Inf 31 0 58 0 NM_177407 refGene chr18 61115520 + 65252 graph_second l 54 149 ctccgtccaa 222 6.11641842750387e-10 Inf 31 0 58 0 tgtgttgtgt 223 6.95125497059007e-10 0.343434343434343 34 99 62 103 gagacagtga 224 8.36266698547785e-10 0.0344827586206897 1 29 2 30 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 225 8.49738728106695e-10 0.210526315789474 12 57 22 60 ctgcatcgtt 226 8.82243910876161e-10 0.0606060606060606 2 33 4 34 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 227 8.86045624846013e-10 35 35 1 64 1 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 228 9.17626526893157e-10 0.064516129032258 2 31 3 32 aagaaaccag 229 9.46168862641804e-10 0.155555555555556 7 45 12 47 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 230 1.07640243248523e-09 Inf 31 0 57 0 NM_133195 refGene chr18 26103935 - 63468 graph_last l 96 185 aagagaacac 231 1.50819631038668e-09 34 34 1 63 1 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 232 1.50819631038668e-09 34 34 1 63 1 gggtttttat 233 1.66150784237108e-09 0.196428571428571 11 56 21 58 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 234 1.71723078356543e-09 0 0 23 0 24 gtgttaacca 235 1.89134014241874e-09 0.159090909090909 7 44 12 46 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 236 2.2478825225583e-09 0.0666666666666667 2 30 3 31 gcagggtggg 237 2.38792374218717e-09 0.111111111111111 4 36 7 38 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 238 2.42010897107475e-09 0.238095238095238 15 63 28 66 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 239 2.61466365382435e-09 34 34 1 62 1 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 240 2.8486809327272e-09 Inf 29 0 54 0 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 241 2.8486809327272e-09 Inf 29 0 54 0 aataaactgc 242 3.8375004822824e-09 0.196078431372549 10 51 18 53 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 243 3.9600895105838e-09 18 36 2 66 2 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 244 4.14275427054342e-09 0.090909090909091 3 33 5 34 gtgtatcttt 245 4.19724132688873e-09 0.170212765957447 8 47 15 49 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 246 4.48671746661699e-09 0 0 22 0 23 gcacaggaga 247 4.48671746661699e-09 0 0 22 0 23 gtttagtgga 248 4.48671746661699e-09 0.159090909090909 7 44 13 46 genomic chr10 130504840 - 0 unique_long l 55 103 gtggcaggcg 249 4.81408306915948e-09 Inf 29 0 53 0 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 250 4.89288470720827e-09 2.96969696969697 98 33 180 34 gtcaaaaaaa 251 4.89288470720827e-09 0.064516129032258 2 31 4 32 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 252 9.7772176399377e-09 0.0416666666666667 1 24 1 25 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 253 1.06886982018987e-08 0.279411764705882 19 68 35 71 acgctgaata 254 1.20814662845726e-08 0 0 21 0 22 ttatcactgt 255 1.20814662845726e-08 0 0 21 0 22 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 256 1.23926438465720e-08 0.135135135135135 5 37 9 39 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 257 1.27156905256742e-08 0.0384615384615385 1 26 2 27 tcccccacac 258 1.36561209788644e-08 7.33333333333333 44 6 82 6 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 259 1.37857358772786e-08 0.204081632653061 10 49 18 51 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 260 1.39012532933361e-08 0.291666666666667 21 72 39 75 NM_019632 refGene chr2 149091252 - 80110 graph_last l 79 133 aacacttgta 261 1.40172231605819e-08 Inf 27 0 50 0 NM_033264 refGene chr9 114792119 - 141710 graph_last l 116 153 ttacttgatc 262 1.40172231605819e-08 Inf 27 0 50 0 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 263 1.51534346138761e-08 Inf 28 0 51 0 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 264 1.62197327571657e-08 2.51063829787234 118 47 218 49 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 265 1.70520662631374e-08 0.53 106 200 196 209 atactgaagc 266 1.7520921689012e-08 0.283582089552239 19 67 35 70 ttatcaagtg 267 2.12959246145369e-08 12 36 3 67 3 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 268 2.20054625467158e-08 0.0967741935483871 3 31 5 32 genomic chr7 114718440 + 0 unique_long l 65 101 gctatttgcc 269 2.30009371883886e-08 Inf 27 0 49 0 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 270 2.65299559457233e-08 0.138888888888889 5 36 9 38 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 271 2.65955301088939e-08 0.117647058823529 4 34 7 35 atcctggtaa 272 2.687371750232e-08 3.73684210526316 71 19 131 20 gaagtcggaa 273 2.72060479478142e-08 0.0689655172413793 2 29 4 30 ggagagggta 274 2.72950223488260e-08 0.153846153846154 6 39 11 41 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 275 2.7984212087635e-08 16.5 33 2 61 2 tcttaatgaa 276 2.91744180823538e-08 0.386138613861386 39 101 72 105 NM_009871 refGene chr11 80051754 + 22184 graph_last l 45 226 ctgctatgaa 277 2.93210022357336e-08 0.186046511627907 8 43 14 45 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 278 3.02445258830455e-08 0.04 1 25 2 26 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 279 3.02445258830455e-08 0.04 1 25 2 26 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 280 3.04708685560880e-08 0 0 20 0 21 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 281 3.1195896345595e-08 0.175 7 40 12 42 taaaaagaaa 282 3.52371796029633e-08 8.2 41 5 75 5 NM_022656 refGene chr14 25710087 - 40123 graph_last l 90 323 ggtccaagag 283 5.41642257212391e-08 0.2 9 45 16 47 ctgtcatttg 284 5.64801971206526e-08 0.142857142857143 5 35 9 37 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 285 5.64801971206526e-08 0.142857142857143 5 35 9 37 gaggagaaga 286 5.73785671566711e-08 0.333333333333333 26 78 48 81 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 287 5.91077459041324e-08 0.423423423423423 47 111 86 116 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 288 6.02439559977045e-08 0.0454545454545455 1 22 1 23 gtgagcttgt 289 6.02439559977045e-08 0.0454545454545455 1 22 1 23 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 290 6.02439559977045e-08 0.0454545454545455 1 22 1 23 gctttgactg 291 7.32715800095751e-08 0.0769230769230769 2 26 3 27 ccagaacaga 292 8.3274838809434e-08 0.536458333333333 103 192 191 200 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 293 8.73389985830824e-08 4.66666666666667 56 12 104 13 atagaggcaa 294 9.10746437813634e-08 0.2 9 45 17 47 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 295 9.66156259300567e-08 2.67567567567568 99 37 183 39 NM_009142 refGene chr8 96065511 + 132522 graph_last l 78 152 ctccacagaa 296 1.13568046790219e-07 Inf 24 0 45 0 agaaataaat 297 1.14037811236906e-07 0.103448275862069 3 29 5 30 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 298 1.1491949594831e-07 Inf 25 0 46 0 ctgcagcacc 299 1.1491949594831e-07 Inf 25 0 46 0 tacatacata 300 1.1491949594831e-07 Inf 25 0 46 0 caccaccgtt 301 1.15558780585286e-07 0.313432835820896 21 67 38 70 tagggcaatc 302 1.24941484666368e-07 0.318840579710145 22 69 40 72 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 303 1.33724325251487e-07 0.323943661971831 23 71 42 74 tctacaagaa 304 1.36315721051847e-07 0.36144578313253 30 83 56 87 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 305 1.47040451111526e-07 7.8 39 5 72 5 ggaaaggcaa 306 1.47040451111526e-07 7.8 39 5 72 5 cctcctccag 307 1.54646105556074e-07 4.06666666666667 61 15 112 16 ctcaataaat 308 1.72353438843126e-07 0.08 2 25 3 26 gtcagttaaa 309 1.72353438843126e-07 0.08 2 25 3 26 tgaaaaaaaa 310 1.81723822429936e-07 0.263157894736842 15 57 28 59 NM_182650 refGene chr6 51936886 - 112726 graph_last l 134 450 gtgtaataag 311 1.85728569552464e-07 0.318181818181818 21 66 38 69 NM_177639 refGene chr17 71233584 + 60910 graph_last l 51 90 cattactgca 312 1.95477017613050e-07 15 30 2 56 2 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 313 2.08989559075550e-07 0 0 18 0 19 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 314 2.11407709760135e-07 5.5 44 8 82 8 atttgattag 315 2.20353927457473e-07 0.166666666666667 6 36 11 38 ttccagcctt 316 2.27059776222865e-07 2.73529411764706 93 34 171 36 ggatatgtgg 317 2.40979066205476e-07 28 28 1 51 1 ttcagctcga 318 2.42634276819366e-07 0.235294117647059 12 51 23 53 tcaataaagc 319 2.46668159293667e-07 0.259259259259259 14 54 26 56 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 320 2.52016427656072e-07 0.107142857142857 3 28 5 29 NM_013509 refGene chr6 126683937 - 116901 graph_last l 77 103 tcccacagtt 321 2.98159016172231e-07 Inf 23 0 43 0 NM_025994 refGene chr4 140737608 - 98638 graph_last 75 162 tgcttgctca 322 3.10290793129478e-07 15 30 2 55 2 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 323 3.10290793129478e-07 15 30 2 55 2 atgtcatcaa 324 3.17921910591334e-07 5.5 44 8 81 8 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 325 3.31841300643024e-07 0.0769230769230769 2 26 4 27 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 326 3.65304460322478e-07 27 27 1 49 1 NM_013556 refGene chrX_random 10203554 + 153014 graph_last l 168 266 tttcagcagt 327 3.65304460322478e-07 8.75 35 4 64 4 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 328 3.98544088534069e-07 6 42 7 77 7 cctccctttt 329 4.02532705006328e-07 0.103448275862069 3 29 6 30 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 330 4.1176567509263e-07 4.41666666666667 53 12 98 13 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 331 4.30478112942336e-07 0.0454545454545455 1 22 2 23 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 332 4.30478112942336e-07 0.0454545454545455 1 22 2 23 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 333 4.51162098300608e-07 0.3 18 60 34 63 tttgtgtctg 334 5.01206189497751e-07 Inf 23 0 42 0 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 335 5.34326683551352e-07 0 0 17 0 18 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 336 5.34326683551352e-07 0 0 17 0 18 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 337 5.34326683551352e-07 0 0 17 0 18 tccggcttgt 338 5.34326683551352e-07 0 0 17 0 18 NM_010771 refGene chr18 35750143 + 63875 graph_second l 11 76 tttggatgtt 339 5.34326683551352e-07 0 0 17 0 18 gcagttgtcc 340 5.51272410977478e-07 4.63636363636364 51 11 94 12 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 341 5.8005311773654e-07 10.3333333333333 31 3 58 3 ctattaaaag 342 5.86443983999797e-07 10.6666666666667 32 3 59 3 taaatcaact 343 5.86443983999797e-07 0.133333333333333 4 30 7 31 NM_144859 refGene chr17 64375162 - 60598 graph_last l 61 136 ctttctcact 344 5.87800275994501e-07 26 26 1 48 1 taagtggaat 345 6.08817457618203e-07 0.323076923076923 21 65 39 68 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 346 8.2710547739371e-07 14.5 29 2 53 2 gctaaccacc 347 8.2710547739371e-07 14.5 29 2 53 2 gctgggcggg 348 8.2710547739371e-07 14.5 29 2 53 2 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 349 8.78995142860306e-07 0.107142857142857 3 28 6 29 tttttggtgt 350 8.88022495385376e-07 0.176470588235294 6 34 11 36 tcctgggatg 351 8.97348804282102e-07 8.5 34 4 62 4 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 352 9.11759075869284e-07 5.71428571428571 40 7 74 7 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 353 9.19827973268081e-07 0.0526315789473684 1 19 1 20 gatgcgcttg 354 9.19827973268081e-07 0.0526315789473684 1 19 1 20 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 355 9.25484286565853e-07 0.0869565217391304 2 23 3 24 NM_022029 refGene chr9 38324027 + 136533 graph_last l 92 152 ctgggcgcgt 356 9.84780705360979e-07 25 25 1 47 1 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 357 1.02192267952117e-06 0.0476190476190476 1 21 2 22 catacctgaa 358 1.13638620985077e-06 0.205128205128205 8 39 15 41 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 359 1.18233349762984e-06 0.25 12 48 23 50 atactaacgt 360 1.24487064674700e-06 0.115384615384615 3 26 5 27 taaataaaga 361 1.24487064674700e-06 0.115384615384615 3 26 5 27 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 362 1.24487064674700e-06 0.115384615384615 3 26 5 27 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 363 1.26832371305009e-06 7 35 5 65 5 ttcattataa 364 1.27745243481060e-06 0.411111111111111 37 90 69 94 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 365 1.30975985573258e-06 14 28 2 51 2 NM_021560 refGene chr3 17968391 + 83311 graph_last l 12 54 gcgatctgcc 366 1.36298462156061e-06 0 0 16 0 17 tactcattat 367 1.36298462156061e-06 2.47368421052632 94 38 174 40 tgaggatgaa 368 1.36298462156061e-06 0 0 16 0 17 NM_011861 refGene chr17 27340445 + 58149 graph_last l 49 144 aactggccgc 369 1.37244684929701e-06 Inf 21 0 39 0 NM_029879 refGene chr13 103551767 - 37712 graph_last l 48 91 caaatggact 370 1.37244684929701e-06 Inf 21 0 39 0 NM_009872 refGene chr1 76438520 + 3664 graph_last l 52 134 ctgggagttg 371 1.37244684929701e-06 Inf 21 0 39 0 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 372 1.37244684929701e-06 Inf 21 0 39 0 BC049262 knownGene chr10 101636709 + 15243 graph_last l 47 130 tgatggaagg 373 1.37244684929701e-06 Inf 21 0 39 0 tgggactcac 374 1.46263090642625e-06 4.6 46 10 84 10 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 375 1.47968437546792e-06 Inf 22 0 40 0 NM_008131 refGene chr1 157363262 + 7351 graph_last l 47 91 tccggtaggc 376 1.47968437546792e-06 Inf 22 0 40 0 tctcccccac 377 1.47968437546792e-06 Inf 22 0 40 0 tctaagtacg 378 1.59473996098133e-06 24 24 1 45 1 tgtaatacaa 379 1.59473996098133e-06 24 24 1 45 1 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 380 1.63110194696602e-06 25 25 1 46 1 attttgtata 381 1.63110194696602e-06 25 25 1 46 1 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 382 1.63110194696602e-06 25 25 1 46 1 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 383 1.64030450772771e-06 0.0833333333333333 2 24 4 25 NM_011162 refGene chr2 92999933 - 76972 graph_last l 118 242 ccacctggaa 384 1.6477382058209e-06 6.16666666666667 37 6 68 6 NM_022417 refGene chr1 87790773 + 4273 graph_last l 184 778 gtagtggagc 385 1.98062706741565e-06 4.07692307692308 53 13 97 14 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 386 2.02581680017579e-06 3.31578947368421 63 19 116 20 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 387 2.08488069964798e-06 0.090909090909091 2 22 3 23 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 388 2.08488069964798e-06 0.090909090909091 2 22 3 23 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 389 2.08488069964798e-06 0.090909090909091 2 22 3 23 NM_018745 refGene chr15 39066010 - 46428 graph_last l 8 56 aaatagacgt 390 2.18893498441682e-06 0.0555555555555556 1 18 1 19 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 391 2.18893498441682e-06 0.0555555555555556 1 18 1 19 genomic chrM 16041 - 0 unique_long l 56 153 aataattagc 392 2.18893498441682e-06 Inf 21 0 38 0 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 393 2.18893498441682e-06 0.0555555555555556 1 18 1 19 tgtatacaca 394 2.18893498441682e-06 Inf 21 0 38 0 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 395 2.18893498441682e-06 Inf 21 0 38 0 atccgaaaga 396 2.31682375382691e-06 0.34375 22 64 41 67 ccctcaccca 397 2.33790908810420e-06 0.05 1 20 2 21 ctacgttctc 398 2.38182174591805e-06 0.296296296296296 16 54 30 56 ctctcttcta 399 2.47970185242620e-06 0.205882352941176 7 34 12 36 NM_011393 refGene chr2 103004726 + 77399 graph_last l 39 79 attgtttgca 400 2.48971890403451e-06 24 24 1 44 1 gactgtgcca 401 2.51165360839984e-06 4.36363636363636 48 11 89 12 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 402 2.52577001173863e-06 0.2 7 35 13 37 tgtaagtctg 403 2.54366475406316e-06 0.161290322580645 5 31 9 32 atggcttaat 404 2.61656000778500e-06 0.12 3 25 5 26 acagtgcctg 405 2.62452149333546e-06 0.133333333333333 4 30 8 31 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 406 2.75105626432882e-06 0.225 9 40 17 42 NM_009457 refGene chrX 19235820 + 147564 graph_last l 47 288 tagccaagcc 407 2.75105626432882e-06 0.225 9 40 17 42 gggtcaaagg 408 2.84771465183033e-06 0.15625 5 32 10 33 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 409 3.12900172870736e-06 0.255813953488372 11 43 20 45 taaaaaaaaa 410 3.13355114558366e-06 0.416666666666667 35 84 65 88 gcagctcaca 411 3.1681940789878e-06 13.5 27 2 49 2 CF929608 all_est chr12 51042570 + 28064 graph_last 3 55 aattcaatta 412 3.35506367739014e-06 0 0 15 0 16 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 413 3.35506367739014e-06 0 0 15 0 16 tccctgactt 414 3.35506367739014e-06 0 0 15 0 16 NM_009441 refGene chr16 96222366 + 56249 graph_last l 65 151 tgagaactgc 415 3.49359590871691e-06 9.66666666666667 29 3 53 3 X57780 knownGene chrM 2069 + 142531 graph_last l 436 2194 aacggctaaa 416 3.5684597646298e-06 Inf 20 0 37 0 NM_146125 refGene chr2 120021247 + 78437 graph_last l 55 96 gtcctgcagg 417 3.5684597646298e-06 Inf 20 0 37 0 NM_016783 refGene chrX 27932232 - 147872 graph_last l 3 92 tagtgttttc 418 3.5684597646298e-06 Inf 20 0 37 0 tccctccctt 419 3.5684597646298e-06 Inf 20 0 37 0 ttggaacaat 420 3.58353814170834e-06 0.0869565217391304 2 23 4 24 tgggtgtccc 421 3.75753877279549e-06 6 36 6 66 6 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 422 3.89114395843417e-06 0.30188679245283 16 53 30 55 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 423 3.95775628326243e-06 23 23 1 43 1 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 424 4.48267004086528e-06 0.25 10 40 18 42 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 425 4.68898695328555e-06 0.0952380952380952 2 21 3 22 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 426 4.80680493440945e-06 0.230769230769231 9 39 17 41 NM_025816 refGene chr6 53234427 + 112812 graph_last l 22 165 accactgata 427 4.97011126612087e-06 0.166666666666667 5 30 9 31 aacaggttca 428 5.10074768124734e-06 0.4125 33 80 61 84 taagggaaat 429 5.15121330377354e-06 2.44444444444444 88 36 163 38 AK122380 knownGene chr8 84803497 + 131761 graph_last l 86 147 gcaggtcccc 430 5.15167224603931e-06 13 26 2 48 2 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 431 5.24374454468068e-06 0.0588235294117647 1 17 1 18 NM_198942 refGene chr17 80944018 - 61440 graph_last l 6 44 tgagtaagaa 432 5.24374454468068e-06 0.0588235294117647 1 17 1 18 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 433 5.30571486814288e-06 2.56666666666667 77 30 143 31 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 434 5.33182506330872e-06 4.27272727272727 47 11 86 12 aagaaaacat 435 5.38291956377424e-06 0.0526315789473684 1 19 2 20 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 436 5.38291956377424e-06 0.0526315789473684 1 19 2 20 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 437 5.38291956377424e-06 0.0526315789473684 1 19 2 20 NM_011273 refGene chr1 158735049 - 7403 graph_last l 10 76 tggagtttcc 438 5.62870194429197e-06 0.125 3 24 5 25 atggctcaca 439 5.7024960034331e-06 5 40 8 73 8 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 440 5.81591784222121e-06 5.83333333333333 35 6 65 6 NM_011100 refGene chr3 150651068 - 90234 graph_last l 38 103 cctaaaattc 441 5.99504466041648e-06 Inf 20 0 36 0 gctgtgggtc 442 5.99504466041648e-06 Inf 20 0 36 0 NM_178795 refGene chr2 121579213 + 78592 graph_last l 63 153 tgtgactccc 443 5.99504466041648e-06 Inf 20 0 36 0 NM_023850 refGene chr2 93230019 + 76987 graph_last l 75 134 ctggtacgtt 444 6.48247176801726e-06 23 23 1 42 1 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 445 6.81597414422374e-06 6.6 33 5 60 5 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 446 6.81597414422374e-06 6.6 33 5 60 5 BY534359 all_est chrX 84532804 + 150025 graph_last 0 72 tgagagaaaa 447 8.02228148933712e-06 0.090909090909091 2 22 4 23 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 448 8.22625409684321e-06 0.12 3 25 6 26 NM_009548 refGene chr11 61020026 - 20524 graph_last l 112 164 ccaaagaacc 449 8.23441017557682e-06 12.5 25 2 46 2 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 450 8.4790312790669e-06 0 0 14 0 15 gattctccga 451 8.4790312790669e-06 0 0 14 0 15 gccttggtga 452 8.4790312790669e-06 12.5 25 2 47 2 taatgtagac 453 8.4790312790669e-06 12.5 25 2 47 2 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 454 8.4790312790669e-06 0 0 14 0 15 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 455 9.80793016478336e-06 2.95238095238095 62 21 115 22 BC047418 knownGene chrX 91466080 + 150344 graph_last 0 3086 aggacaaata 456 1.01579607235682e-05 Inf 18 0 34 0 ctctggaaag 457 1.01579607235682e-05 Inf 18 0 34 0 NM_133726 refGene chr15 82825573 + 48651 graph_second l 46 85 gccaagtaag 458 1.01579607235682e-05 Inf 18 0 34 0 AK044090 knownGene chr9 72562933 - 139102 graph_last l 38 57 ggtctaagcg 459 1.01579607235682e-05 Inf 18 0 34 0 NM_080555 refGene chr4 104090744 + 95672 graph_last 45 145 gtgtagatgc 460 1.01579607235682e-05 Inf 18 0 34 0 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 461 1.01579607235682e-05 Inf 18 0 34 0 ttaatattta 462 1.01579607235682e-05 4.2 42 10 77 10 aagatgatat 463 1.03936246176865e-05 Inf 19 0 35 0 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 464 1.03936246176865e-05 Inf 19 0 35 0 ctgcagcggc 465 1.03936246176865e-05 Inf 19 0 35 0 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 466 1.03936246176865e-05 Inf 19 0 35 0 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 467 1.03936246176865e-05 Inf 19 0 35 0 NM_199022 refGene chr2 125928783 + 78833 graph_last l 38 101 cattgtggaa 468 1.08278693357554e-05 22 22 1 41 1 NM_011035 refGene chr7 90025637 + 123245 graph_last l 246 410 ctcagaggtc 469 1.12329990955441e-05 4.18181818181818 46 11 84 12 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 470 1.21589685048402e-05 0.130434782608696 3 23 5 24 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 471 1.26367280200821e-05 0.0625 1 16 1 17 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 472 1.27384488261631e-05 12 24 2 45 2 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 473 1.48802192278000e-05 0.243243243243243 9 37 17 39 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 474 1.60321359051195e-05 5 35 7 65 7 gaaaatatcc 475 1.62389020588374e-05 0.193548387096774 6 31 11 32 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 476 1.62389020588374e-05 0.193548387096774 6 31 11 32 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 477 1.63067100298528e-05 Inf 18 0 33 0 NM_175692 refGene chr2 159010496 + 80939 graph_last l 52 68 ctactgaact 478 1.63067100298528e-05 Inf 18 0 33 0 NM_008447 refGene chr10 130505931 - 16675 graph_last l 32 56 ctgcaaaacc 479 1.63067100298528e-05 Inf 18 0 33 0 NM_008963 refGene chr2 25734542 - 72846 graph_last 54 177 gccaccctct 480 1.63067100298528e-05 Inf 18 0 33 0 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 481 1.63067100298528e-05 3.23529411764706 55 17 101 18 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 482 1.63067100298528e-05 Inf 18 0 33 0 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 483 1.70777408364402e-05 21 21 1 39 1 agggaaaaaa 484 1.72193589969231e-05 0.125 3 24 6 25 tagatatagg 485 1.73124029601463e-05 1.68141592920354 190 113 350 118 gtgaaattat 486 1.83758861711842e-05 4.625 37 8 68 8 NM_026629 refGene chr6 55168250 + 112941 graph_last l 20 135 agagcaagga 487 1.86603488907424e-05 0.153846153846154 4 26 7 27 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 488 1.86603488907424e-05 0.153846153846154 4 26 7 27 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 489 1.86603488907424e-05 0.153846153846154 4 26 7 27 tggagagaat 490 1.88304846221656e-05 0.178571428571429 5 28 9 29 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 491 2.15579147001457e-05 0 0 13 0 14 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 492 2.15579147001457e-05 0 0 13 0 14 NM_177616 refGene chr11 4039068 + 17252 graph_last l 3 33 gaatctattt 493 2.15579147001457e-05 0 0 13 0 14 ttcattattg 494 2.15579147001457e-05 0.304347826086957 14 46 26 48 gaagatgagc 495 2.16427410504389e-05 4.1 41 10 75 10 gcgaagctca 496 2.22422900786953e-05 0.410958904109589 30 73 56 76 gaaatttaaa 497 2.37307189798793e-05 0.279069767441860 12 43 23 45 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 498 2.47598456710802e-05 0.212121212121212 7 33 13 34 atctttctgg 499 2.64531327325719e-05 6.2 31 5 57 5 NM_145545 refGene chr3 146522536 + 90000 graph_second 0 2495 agcaattcaa 500 2.65936492484158e-05 Inf 17 0 32 0 NM_177379 refGene chr9 32958080 + 136212 graph_last l 33 60 cagaatgagc 501 2.65936492484158e-05 Inf 17 0 32 0 gaggagtggg 502 2.65936492484158e-05 Inf 17 0 32 0 NM_153595 refGene chr10 89048034 - 14566 graph_last l 36 61 tcacagacac 503 2.65936492484158e-05 Inf 17 0 32 0 tcggatatta 504 2.65936492484158e-05 Inf 17 0 32 0 NM_029530 refGene chr2 136212325 + 79508 graph_last l 58 171 tgagttcgct 505 2.65936492484158e-05 Inf 17 0 32 0 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 506 2.65936492484158e-05 2.90476190476190 61 21 112 22 tatagatatg 507 2.71630138827659e-05 21 21 1 38 1 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 508 2.83388990697305e-05 0.257142857142857 9 35 16 37 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 509 2.83388990697305e-05 0.257142857142857 9 35 16 37 gaagcaaaga 510 2.83437181856632e-05 0.372881355932203 22 59 41 62 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 511 2.90792176400659e-05 0.0588235294117647 1 17 2 18 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 512 2.90792176400659e-05 0.0588235294117647 1 17 2 18 tttatataaa 513 2.90792176400659e-05 0.0588235294117647 1 17 2 18 NM_011885 refGene chr7 22543696 - 119747 graph_last l 49 216 tgctgggatg 514 2.9307797962163e-05 0.2 6 30 11 31 ccttgctcaa 515 2.97544874113242e-05 2 112 56 206 58 ggctttggtc 516 3.0218400460916e-05 0.0666666666666667 1 15 1 16 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 517 3.07769696232293e-05 5.5 33 6 60 6 tctgctaaag 518 3.2491942563908e-05 11.5 23 2 43 2 tgtgtgagga 519 3.32188225129154e-05 0.153846153846154 4 26 8 27 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 520 3.38545316789631e-05 0.16 4 25 7 26 tacattttca 521 3.44222790271637e-05 0.275 11 40 21 42 aaaataaagg 522 3.45686221961847e-05 0.235294117647059 8 34 15 36 ggctgcagcc 523 3.50123615224071e-05 3.5 49 14 90 15 tgctgcacgt 524 3.50123615224071e-05 3.5 49 14 90 15 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 525 3.56470916629695e-05 0.130434782608696 3 23 6 24 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 526 3.59212059768651e-05 0.319148936170213 15 47 28 49 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 527 3.78669330137054e-05 0.1 2 20 4 21 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 528 3.78669330137054e-05 0.1 2 20 4 21 tgtgtcaacc 529 4.29843053113752e-05 2.33333333333333 77 33 142 34 NM_016744 refGene chr2 80196841 - 76137 graph_last l 49 73 acaacctatg 530 4.41725024780266e-05 Inf 17 0 31 0 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 531 4.41725024780266e-05 Inf 17 0 31 0 gcttccaatc 532 4.41725024780266e-05 Inf 17 0 31 0 NM_146073 refGene chr17 3537545 - 56573 graph_last 1 2114 tagttactta 533 4.41725024780266e-05 Inf 17 0 31 0 tctctgaccc 534 4.41725024780266e-05 Inf 17 0 31 0 ttataccagc 535 4.41725024780266e-05 Inf 17 0 31 0 attatatttt 536 5.00531615107802e-05 8.33333333333333 25 3 46 3 ggaagatgct 537 5.17153367603071e-05 0.389830508474576 23 59 42 62 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 538 5.22649688117114e-05 11 22 2 41 2 taatatgtag 539 5.31460316099571e-05 0.111111111111111 2 18 3 19 aataaaatta 540 5.4505986416314e-05 0 0 12 0 13 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 541 5.4505986416314e-05 0 0 12 0 13 NM_145422 refGene chr10 88338778 - 14527 graph_last l 50 161 ctattaaata 542 5.45447557348614e-05 0.206896551724138 6 29 11 30 tgatatgagc 543 5.63858297907858e-05 2.89473684210526 55 19 102 20 NM_172512 refGene chr3 97919894 - 87291 graph_last l 130 345 gaacaggcag 544 5.8949217011083e-05 0.333333333333333 16 48 30 50 cgtctgtgga 545 6.13668130647488e-05 2.32352941176471 79 34 146 36 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 546 6.23026313245556e-05 3.05882352941176 52 17 96 18 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 547 6.7810320590474e-05 0.0625 1 16 2 17 caaatatgtt 548 6.7810320590474e-05 0.0625 1 16 2 17 NM_009528 refGene chr15 87202791 - 49042 graph_last l 6 83 tccttgaagt 549 6.7810320590474e-05 0.0625 1 16 2 17 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 550 6.7810320590474e-05 0.0625 1 16 2 17 tggcccaaat 551 6.84793419424959e-05 0.289473684210526 11 38 20 40 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 552 7.15013720283621e-05 0.25 8 32 14 33 NM_019793 refGene chr9 58246662 - 137907 graph_last l 251 568 gagactagca 553 7.28797157071266e-05 3.66666666666667 44 12 81 13 genomic chr13 71065301 + 0 unique_short s 1 51 acacgacgta 554 7.29668752298757e-05 0.0714285714285714 1 14 1 15 agaaataaaa 555 7.29668752298757e-05 0.0714285714285714 1 14 1 15 agctcttgta 556 7.29668752298757e-05 0.0714285714285714 1 14 1 15 NM_008632 refGene chr1 68044382 - 3222 graph_last 0 44 attggcattt 557 7.29668752298757e-05 0.0714285714285714 1 14 1 15 gggggtgagg 558 7.29668752298757e-05 0.0714285714285714 1 14 1 15 atgcagagac 559 7.321547157241e-05 20 20 1 36 1 NM_178615 refGene chr17 15456505 - 57334 graph_last l 6 72 tgccaagttc 560 7.321547157241e-05 20 20 1 36 1 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 561 7.43440300736495e-05 0.136363636363636 3 22 6 23 NM_028188 refGene chr3 91290308 - 86768 graph_last l 42 88 cctttgcccc 562 7.55148845622054e-05 Inf 16 0 30 0 tgacccttgc 563 7.55148845622054e-05 Inf 16 0 30 0 AY255605 knownGene chr4_random 6506063 + 99997 graph_second l 31 67 ttgtcactca 564 7.55148845622054e-05 Inf 16 0 30 0 ttttctatgc 565 7.55148845622054e-05 Inf 16 0 30 0 NM_178631 refGene chr3 13949517 + 83169 graph_second 0 146 acgggcaaaa 566 8.22859915291489e-05 0.105263157894737 2 19 4 20 NM_174997 refGene chr1 35501828 - 1439 graph_last l 16 91 gaacttatgt 567 8.22859915291489e-05 0.105263157894737 2 19 4 20 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 568 8.22859915291489e-05 0.105263157894737 2 19 4 20 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 569 8.86993275921186e-05 5.6 28 5 52 5 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 570 9.2683234782334e-05 0.396551724137931 23 58 43 61 cccacaaggt 571 9.33193035031058e-05 0.340425531914894 16 47 30 49 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 572 0.000101772592730094 0.214285714285714 6 28 11 29 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 573 0.000105009444943458 0.185185185185185 5 27 10 28 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 574 0.000106200887164774 6.5 26 4 48 4 caataaactg 575 0.000114673332517416 2.25 81 36 149 38 NM_021324 refGene chr7 4002060 + 118502 graph_last l 77 162 gcaaagaaaa 576 0.000117460361975967 18 18 1 34 1 gcaatttaac 577 0.000118160741084472 0.15 3 20 5 21 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 578 0.000118160741084472 0.15 3 20 5 21 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 579 0.000118638333954772 0.117647058823529 2 17 3 18 ccatttgagc 580 0.000118638333954772 0.117647058823529 2 17 3 18 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 581 0.000119399129998825 0.173913043478261 4 23 7 24 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 582 0.000119399129998825 0.173913043478261 4 23 7 24 tttctgtatg 583 0.000119399129998825 0.173913043478261 4 23 7 24 aaattggatc 584 0.000122210128589550 Inf 15 0 28 0 NM_013681 refGene chr6 116888565 + 116249 graph_last l 29 70 ccattgattg 585 0.000122210128589550 Inf 15 0 28 0 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 586 0.000122210128589550 Inf 15 0 28 0 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 587 0.000122210128589550 Inf 15 0 28 0 NM_009224 refGene chr7 38518551 + 120795 graph_last l 31 36 tccctttgag 588 0.000122210128589550 Inf 15 0 28 0 ctcttcccac 589 0.000124260874672872 19 19 1 35 1 genomic chrM 4414 + 0 unique_long l 914 2465 aggaggactt 590 0.000133342519025074 Inf 16 0 29 0 NM_011246 refGene chr2 117550768 - 78248 graph_last l 87 114 aggttttgtt 591 0.000133342519025074 Inf 16 0 29 0 NM_027629 refGene chr7 92441942 + 123455 graph_last l 36 59 caccgtaatg 592 0.000133342519025074 Inf 16 0 29 0 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 593 0.000133342519025074 Inf 16 0 29 0 tgcttatacc 594 0.000133342519025074 Inf 16 0 29 0 ttgggccaga 595 0.000134053664033231 2.54166666666667 61 24 113 25 agattattgt 596 0.000136081961385996 0 0 11 0 12 NM_023324 refGene chr11 21047992 + 18098 graph_last l 10 44 ataactgatc 597 0.000136081961385996 0 0 11 0 12 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 598 0.000136081961385996 0 0 11 0 12 gacgagatgg 599 0.000136081961385996 0 0 11 0 12 ttccttttgt 600 0.000136081961385996 0 0 11 0 12 NM_026823 refGene chr1 138075254 + 6492 graph_last l 59 231 ggagggttgg 601 0.000139052200038841 0.277777777777778 10 36 19 38 cttacatttc 602 0.000153283716734014 0.0666666666666667 1 15 2 16 genomic chr10 64909820 + 0 unique_long l 8 46 gtgccaagga 603 0.000153283716734014 0.0666666666666667 1 15 2 16 NM_009466 refGene chr5 64716776 - 103290 graph_last 0 52 tgtagactgg 604 0.000153283716734014 0.0666666666666667 1 15 2 16 NM_019710 refGene chrX 139759704 + 152140 graph_last l 15 68 ttagattgtt 605 0.000153283716734014 0.0666666666666667 1 15 2 16 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 606 0.000162405667950637 6.25 25 4 47 4 ctgctatccg 607 0.000166051232383102 0.36734693877551 18 49 33 51 ttataatata 608 0.000166973911152833 0.294117647058824 10 34 18 36 atttgtatct 609 0.000173654633934508 0.0769230769230769 1 13 1 14 ggggtacctg 610 0.000173654633934508 0.0769230769230769 1 13 1 14 NM_010496 refGene chr12 19542551 + 26650 graph_last l 4 68 gtgggaatag 611 0.000177489570567554 0.111111111111111 2 18 4 19 NM_078478 refGene chr14 31666620 - 40471 graph_last l 66 123 aacaaagcaa 612 0.000182837444748128 18 18 1 33 1 genomic chr9 38323781 - 0 unique_long l 119 145 gttatctgat 613 0.000182837444748128 18 18 1 33 1 NM_172286 refGene chr8 121911265 - 133955 graph_last l 35 62 tcagggagcc 614 0.000182837444748128 18 18 1 33 1 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 615 0.000186443690985243 0.222222222222222 6 27 11 28 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 616 0.000187795100966273 4.125 33 8 61 8 NM_025282 refGene chr13 81768655 + 36483 graph_last l 45 76 taaatagaca 617 0.000187861511830409 7.66666666666667 23 3 42 3 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 618 0.000194594241593516 0.264705882352941 9 34 17 35 genomic chr5 92466331 - 0 unique_long l 31 107 cccactgagt 619 0.000195508220909136 Inf 15 0 27 0 cccattggag 620 0.000195508220909136 Inf 15 0 27 0 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 621 0.000195508220909136 Inf 15 0 27 0 gccgaccccg 622 0.000195508220909136 Inf 15 0 27 0 NM_011170 refGene chr2 132079926 + 79291 graph_last l 42 75 taacttagca 623 0.000195508220909136 Inf 15 0 27 0 NM_020573 refGene chr18 13081721 - 62961 graph_last l 34 51 tggtcttttt 624 0.000195508220909136 Inf 15 0 27 0 NM_011588 refGene chr7 10287113 - 118856 graph_last l 64 160 agaggtggtt 625 0.000196051332404810 5.4 27 5 50 5 cagaacccac 626 0.000210029063983803 0.333333333333333 14 42 26 44 NM_009836 refGene chr3 90467959 + 86658 graph_last 20 143 cacagaacca 627 0.000224873770891558 0.181818181818182 4 22 7 23 NM_010887 refGene chr13 113119749 - 38276 graph_last l 27 187 gataatgcac 628 0.000224873770891558 0.181818181818182 4 22 7 23 tagttccgac 629 0.000234553018138481 0.241379310344828 7 29 13 30 NM_011655 refGene chr17 35501335 - 58992 graph_last l 23 98 ctcctcctgc 630 0.000241594758455848 0.173913043478261 4 23 8 24 NM_178395 refGene chr8 40180587 - 129445 graph_last l 15 60 atatgaaaat 631 0.000243249945724216 0.157894736842105 3 19 5 20 caaggtgaca 632 0.000243249945724216 0.5 43 86 80 90 NM_177887 refGene chr5_random 412529 - 108970 graph_last 70 146 cctttctgtc 633 0.000251841135360427 6 24 4 45 4 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 634 0.000251841135360427 0.375 18 48 33 50 acttcagcca 635 0.000256461533628771 0.125 2 16 3 17 cagaaacagg 636 0.000256461533628771 0.125 2 16 3 17 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 637 0.000256461533628771 0.125 2 16 3 17 gaataaagag 638 0.000256461533628771 0.125 2 16 3 17 NM_019796 refGene chr9 91413676 - 140127 graph_last 14 65 gcaaacaatc 639 0.000256461533628771 0.125 2 16 3 17 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 640 0.000256461533628771 0.125 2 16 3 17 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 641 0.000274692650842564 2.42307692307692 63 26 116 27 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 642 0.000279682633797079 0.258064516129032 8 31 15 32 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 643 0.000282844671655372 3.23076923076923 42 13 78 14 NM_013879 refGene chr5 114215618 + 106194 graph_last l 95 218 tgtgccccag 644 0.000289682900575669 7.33333333333333 22 3 41 3 gaaaggagac 645 0.000294791805891731 17 17 1 32 1 NM_009149 refGene chr8 112789992 - 133441 graph_last l 34 122 tcctcggtgt 646 0.000323737884969137 10 20 2 36 2 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 647 0.000323737884969137 10 20 2 36 2 AK083224 knownGene chr14 86523813 - 43463 graph_last l 39 63 cgtccaggtt 648 0.000326932264796408 Inf 14 0 26 0 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 649 0.000326932264796408 Inf 14 0 26 0 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 650 0.000330542826991816 10 20 2 37 2 NM_020573 refGene chr18 13074281 - 62961 graph_last l 83 123 tattgcaagg 651 0.000330542826991816 10 20 2 37 2 NM_007794 refGene chr8 107206516 + 132995 graph_last 1 27 agacctgtaa 652 0.000342017702178111 0 0 11 0 11 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 653 0.000342017702178111 4.66666666666667 28 6 52 6 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 654 0.000342017702178111 0 0 11 0 11 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 655 0.000342017702178111 0 0 11 0 11 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 656 0.000342017702178111 0 0 11 0 11 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 657 0.000342017702178111 0 0 11 0 11 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 658 0.000342017702178111 0.2 5 25 10 26 NM_025650 refGene chr10 82754685 - 14090 graph_last l 6 34 tctgtttctg 659 0.000342017702178111 0 0 11 0 11 NM_010207 refGene chr7_random 27126424 - 127060 graph_last 0 21 ttcataaaaa 660 0.000342017702178111 0 0 11 0 11 NM_008709 refGene chr12 13191380 - 26350 graph_last 2 26 tttatgaaaa 661 0.000342017702178111 0 0 11 0 11 gaagtcaaaa 662 0.000344640029831159 0.0714285714285714 1 14 2 15 gagtgattat 663 0.000344640029831159 0.0714285714285714 1 14 2 15 tatattgatt 664 0.000344640029831159 0.0714285714285714 1 14 2 15 AK014046 knownGene chr11 62096350 - 20634 graph_last l 16 62 tctctgaggt 665 0.000344640029831159 0.0714285714285714 1 14 2 15 aaaaacaaaa 666 0.000373080506478027 0.117647058823529 2 17 4 18 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 667 0.000373080506478027 0.117647058823529 2 17 4 18 NM_023579 refGene chr14 114054037 + 44438 graph_last l 10 67 tctggcagtc 668 0.000373080506478027 0.117647058823529 2 17 4 18 X57780 knownGene chrM 6672 - 142531 graph_second 152 213 tggtgtaagc 669 0.000373080506478027 4.28571428571429 30 7 55 7 NM_198419 refGene chr13 43186420 + 34339 graph_last l 75 185 taaatccgaa 670 0.000399693872469396 3.875 31 8 58 8 NM_007597 refGene chr11 49920151 - 19666 graph_last l 49 306 taacagttgt 671 0.000399693872469396 0.28125 9 32 16 33 tatctgtcta 672 0.000399693872469396 0.28125 9 32 16 33 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 673 0.000406606869573304 0.0833333333333333 1 12 1 13 gcggtgaatc 674 0.000406606869573304 0.0833333333333333 1 12 1 13 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 675 0.000406606869573304 0.0833333333333333 1 12 1 13 ccatattatg 676 0.000434197810332273 0.15 3 20 6 21 gcccaggctc 677 0.000434197810332273 0.15 3 20 6 21 cctggcactg 678 0.000461760162926986 5.2 26 5 48 5 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 679 0.000461760162926986 5.2 26 5 48 5 NM_010193 refGene chr9 65145351 - 138457 graph_last 18 100 gcaattgaca 680 0.000461760162926986 0.181818181818182 4 22 8 23 gggagggagg 681 0.000483266945621192 17 17 1 31 1 NM_011323 refGene chr15 103059910 + 50127 graph_last l 49 147 gggagactct 682 0.000494504872340683 9.5 19 2 35 2 AK076321 knownGene chr9 61996920 + 138255 graph_last l 15 90 gtggagattg 683 0.000501422761481633 0.166666666666667 3 18 5 19 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 684 0.000501422761481633 0.166666666666667 3 18 5 19 NM_024456 refGene chr11 100379176 - 23873 graph_last l 76 292 taaccaatca 685 0.000507133989154771 0.333333333333333 12 36 22 38 aatccttgcc 686 0.000546079794244148 0.230769230769231 6 26 11 27 genomic chr11 101636695 + 0 unique_long l 25 51 aaccagttct 687 0.00054768870152568 Inf 14 0 25 0 NM_015744 refGene chr15 56417904 + 47061 graph_last l 29 65 aagatgcaca 688 0.00054768870152568 Inf 14 0 25 0 CA320703 all_est chr2 22896745 + 72631 graph_last l 46 101 gacaaaggat 689 0.00054768870152568 Inf 14 0 25 0 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 690 0.00054768870152568 0.415094339622642 22 53 40 55 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 691 0.00054768870152568 Inf 14 0 25 0 BB627528 all_est chr5 149262208 + 108843 graph_last 0 51 gtctttccta 692 0.00054768870152568 Inf 14 0 25 0 ctgctggtgg 693 0.000552785857546774 4.14285714285714 29 7 54 7 NM_015819 refGene chrX 42688995 - 148431 graph_last l 19 54 taaatcccac 694 0.000559756800071853 0.133333333333333 2 15 3 16 NM_019498 refGene chr2 28483315 + 73055 graph_second l 49 149 aatagtttga 695 0.000565373937729457 5.75 23 4 43 4 NM_133350 refGene chr5 29202901 + 101526 graph_last l 62 125 acctccaggc 696 0.000565373937729457 5.75 23 4 43 4 atctactgtg 697 0.000565373937729457 5.75 23 4 43 4 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 698 0.000569317477561249 3.33333333333333 40 12 73 13 cacgctcccg 699 0.000599211783511736 3.66666666666667 33 9 60 9 NM_009454 refGene chr2 79285572 + 76085 graph_last l 15 125 ctcctgaagg 700 0.000664827076298986 0.217391304347826 5 23 9 24 NM_145979 refGene chr6 127056993 + 116948 graph_last l 54 136 tgcaggagct 701 0.00071080338237785 7 21 3 38 3 NM_009668 refGene chr18 32621656 + 63661 graph_last l 84 207 ttcagggcgg 702 0.00071080338237785 7 21 3 38 3 tacacacctg 703 0.000721477902045246 7 21 3 39 3 NM_016891 refGene chr17 20487724 + 57555 graph_last l 94 407 ttttttgtgt 704 0.000727422131593454 0.467741935483871 29 62 53 65 NM_172290 refGene chr9 29662908 - 136058 graph_last l 87 145 aagtgtgaaa 705 0.000769600749238485 4.5 27 6 49 6 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 706 0.000769600749238485 4.5 27 6 49 6 NM_012053 refGene chr15 78134217 + 48155 graph_last 84 491 aatcctgtgg 707 0.000771360880481058 0.365853658536585 15 41 28 43 ggcagccccc 708 0.000771360880481058 16 16 1 29 1 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 709 0.000771360880481058 16 16 1 29 1 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 710 0.000771360880481058 16 16 1 29 1 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 711 0.000776774247601595 9 18 2 34 2 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 712 0.000786738083655548 0.0769230769230769 1 13 2 14 NM_019658 refGene chr19 53776108 - 70518 graph_last l 9 55 aatctgaaaa 713 0.000786738083655548 0.0769230769230769 1 13 2 14 gggtaggggt 714 0.000786738083655548 4.5 27 6 50 6 ttgagaatga 715 0.000786738083655548 0.0769230769230769 1 13 2 14 NM_008640 refGene chr12 9084302 - 26222 graph_last 25 107 caaccatcat 716 0.00079402433137382 0.125 2 16 4 17 NM_026959 refGene chr5 36556737 - 102112 graph_last l 19 123 ggccgtgtgc 717 0.00079402433137382 0.125 2 16 4 17 gagtctccct 718 0.000810104547025343 0.157894736842105 3 19 6 20 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 719 0.000810104547025343 0.157894736842105 3 19 6 20 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 720 0.000814414104561838 3.25 39 12 72 13 gcctctggtg 721 0.000817595234330232 0.2 4 20 7 21 NM_028871 refGene chr4 135120062 + 98142 graph_last 23 100 taagatttca 722 0.000817595234330232 0.2 4 20 7 21 attctgaaca 723 0.000822995085714908 4.14285714285714 29 7 53 7 aaaatgttgt 724 0.000845901720754566 0 0 10 0 10 BB674281 all_est chr3 90690195 + 86687 graph_last 0 19 aattaatcaa 725 0.000845901720754566 0 0 10 0 10 genomic chr14 48083563 + 0 unique_long l 3 27 agatattaaa 726 0.000845901720754566 0 0 10 0 10 NM_026648 refGene chr8 121477835 - 133909 graph_last l 16 42 agcagatggt 727 0.000845901720754566 0 0 10 0 10 attaaagccc 728 0.000845901720754566 0 0 10 0 10 caaaagaagg 729 0.000845901720754566 0 0 10 0 10 AK032339 knownGene chr17 32966326 - 58719 graph_last 2 22 ccctgactgt 730 0.000845901720754566 0 0 10 0 10 NM_146170 refGene chr6 87849266 + 114579 graph_last 2 22 gccacgtata 731 0.000845901720754566 0 0 10 0 10 NM_175201 refGene chr4 43416344 - 92730 graph_last 1 30 gcgctgtttg 732 0.000845901720754566 0 0 10 0 10 gtcacgaaaa 733 0.000845901720754566 0 0 10 0 10 gtgttttgaa 734 0.000845901720754566 0 0 10 0 10 taaataaatg 735 0.000845901720754566 0 0 10 0 10 tatttgcttt 736 0.000845901720754566 0 0 10 0 10 NM_052976 refGene chrX 88394495 - 150213 graph_last l 3 25 tcaaagccta 737 0.000845901720754566 0 0 10 0 10 NM_023324 refGene chr11 21048770 + 18098 graph_last l 5 33 tcaagatctg 738 0.000845901720754566 0 0 10 0 10 NM_080844 refGene chr1 164569762 - 7788 graph_last l 2 21 tgagtggttt 739 0.000845901720754566 0 0 10 0 10 ttgacaaact 740 0.000845901720754566 0 0 10 0 10 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 741 0.000853232640456419 5.75 23 4 42 4 NM_013509 refGene chr6 126683741 - 116901 graph_last l 35 99 accaagtttg 742 0.000874914031740639 Inf 12 0 23 0 NM_016744 refGene chr2 80199013 - 76137 graph_last l 25 33 atttggtcat 743 0.000874914031740639 Inf 12 0 23 0 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 744 0.000874914031740639 Inf 12 0 23 0 genomic chr5 135848574 + 0 unique_long l 34 144 cgccctggct 745 0.000874914031740639 Inf 12 0 23 0 NM_178920 refGene chr15 55705037 + 47025 graph_last l 47 75 ctcagtgtgg 746 0.000874914031740639 Inf 12 0 23 0 NM_133849 refGene chr2 179910762 - 82351 graph_last l 64 92 ctctgcaatc 747 0.000874914031740639 Inf 12 0 23 0 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 748 0.000874914031740639 Inf 12 0 23 0 AK129267 knownGene chr18_random 12235074 + 67016 graph_last l 26 49 ggaacaggag 749 0.000874914031740639 Inf 12 0 23 0 NM_175514 refGene chr2 84247209 + 76272 graph_last l 32 80 ggcgggaagc 750 0.000874914031740639 Inf 12 0 23 0 NM_011676 refGene chr11 77920095 - 21940 graph_last 1 58 gggacagcca 751 0.000874914031740639 Inf 12 0 23 0 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 752 0.000874914031740639 Inf 12 0 23 0 NM_172544 refGene chr12 85830976 + 30167 graph_last l 23 42 gtatgtttga 753 0.000874914031740639 Inf 12 0 23 0 NM_146005 refGene chr10 73135380 + 13402 graph_last 36 79 ttcttcagac 754 0.000874914031740639 Inf 12 0 23 0 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 755 0.000874914031740639 Inf 12 0 23 0 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 756 0.000887654596899013 0.285714285714286 8 28 14 29 acacttgcta 757 0.000906267811581945 0.090909090909091 1 11 1 12 NM_009156 refGene chr7 12912473 - 118959 graph_second l 9 95 acaggaagga 758 0.000906267811581945 0.090909090909091 1 11 1 12 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 759 0.000906267811581945 Inf 13 0 24 0 AK036375 knownGene chr2 157636220 - 80833 graph_last 1 40 agaactgtac 760 0.000906267811581945 0.090909090909091 1 11 1 12 agctccccct 761 0.000906267811581945 0.090909090909091 1 11 1 12 NM_024222 refGene chr9 117615376 - 141880 graph_last l 6 31 agggaaataa 762 0.000906267811581945 0.090909090909091 1 11 1 12 atgtactcgg 763 0.000906267811581945 0.090909090909091 1 11 1 12 atttttaaaa 764 0.000906267811581945 Inf 13 0 24 0 NM_025482 refGene chr2 181399879 + 82485 graph_last l 38 91 caagctcatc 765 0.000906267811581945 Inf 13 0 24 0 NM_010894 refGene chr2 79814959 - 76114 graph_last l 7 44 cagttgcaat 766 0.000906267811581945 0.090909090909091 1 11 1 12 NM_011309 refGene chr3 93204953 - 86984 graph_last l 63 93 cccattcggg 767 0.000906267811581945 Inf 13 0 24 0 genomic chr11 30013082 - 0 unique_long l 19 65 ctctggatgg 768 0.000906267811581945 Inf 13 0 24 0 gaaggaaaaa 769 0.000906267811581945 0.090909090909091 1 11 1 12 gacaaaggtg 770 0.000906267811581945 0.090909090909091 1 11 1 12 D21379 all_est chr7 19969295 + 119521 graph_last l 7 71 gcacctctta 771 0.000906267811581945 0.090909090909091 1 11 1 12 AK010983 knownGene chr8 71207329 + 131015 graph_last 2 82 gcactgcgca 772 0.000906267811581945 0.090909090909091 1 11 1 12 NM_025368 refGene chr7 37364063 + 120679 graph_last l 14 107 gctgccctgc 773 0.000906267811581945 Inf 13 0 24 0 NM_033264 refGene chr9 114798597 - 141710 graph_second l 24 54 ggacggcagt 774 0.000906267811581945 Inf 13 0 24 0 NM_028207 refGene chr11 101636536 - 24017 graph_last l 31 53 gtctacgtat 775 0.000906267811581945 Inf 13 0 24 0 NM_010250 refGene chr11 41756133 - 19197 graph_last l 43 98 tctcactgta 776 0.000906267811581945 Inf 13 0 24 0 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 777 0.000906267811581945 0.090909090909091 1 11 1 12 NM_013684 refGene chr17 15169236 + 57303 graph_last l 12 45 tgatcatact 778 0.000906267811581945 0.090909090909091 1 11 1 12 NM_008802 refGene chr3 19157145 - 83355 graph_last 1 28 tgtgaaggct 779 0.000906267811581945 0.090909090909091 1 11 1 12 NM_178628 refGene chr12 65856222 - 28595 graph_last 5 39 ttagaagtga 780 0.000906267811581945 0.090909090909091 1 11 1 12 BM964406 all_est chr2 37842889 - 73820 graph_last l 9 47 ttgcatttct 781 0.000906267811581945 0.090909090909091 1 11 1 12 NM_007881 refGene chr6 126661781 - 116898 graph_last l 106 385 ggcctgcttc 782 0.000921948135910523 0.391304347826087 18 46 34 48 taaaagaaaa 783 0.000936143695849331 0.484848484848485 32 66 59 69 gtggttcaca 784 0.000945082818170163 4.8 24 5 45 5 ccctgatttt 785 0.00108983940239316 0.259259259259259 7 27 13 28 ggcctgaggc 786 0.00112388334973482 0.227272727272727 5 22 9 23 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 787 0.00114813789779440 15 15 1 28 1 AK032343 all_mrna chr7 71977154 + 122340 graph_last l 31 156 caggctgata 788 0.00115389620417352 0.142857142857143 2 14 3 15 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 789 0.00115389620417352 0.142857142857143 2 14 3 15 tatagtctat 790 0.00115389620417352 0.142857142857143 2 14 3 15 NM_178597 refGene chr14 15621704 - 39454 graph_last l 61 164 cagccctccc 791 0.00116387229069886 9 18 2 33 2 gcccccaatg 792 0.00127126732991239 5.5 22 4 40 4 NM_010487 refGene chr9 22638223 - 135759 graph_last l 47 135 ccccacacac 793 0.00129661813869548 5.5 22 4 41 4 NM_013681 refGene chr6 116906623 + 116249 graph_last l 64 93 ccgctataac 794 0.00138384328392377 Inf 12 0 22 0 NM_020591 refGene chr11 68912604 + 21005 graph_last l 26 59 cgtgatggag 795 0.00138384328392377 Inf 12 0 22 0 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 796 0.00138384328392377 Inf 12 0 22 0 NM_025975 refGene chrX 8203954 - 147166 graph_last l 27 58 gcgttcacct 797 0.00138384328392377 Inf 12 0 22 0 NM_172473 refGene chr10 47362986 + 12180 graph_last l 19 95 gtataaagtt 798 0.00138384328392377 Inf 12 0 22 0 gtgctgccag 799 0.00138384328392377 Inf 12 0 22 0 NM_008448 refGene chr18 6415243 - 62563 graph_last 31 83 gttaattttg 800 0.00138384328392377 Inf 12 0 22 0 tctctgaatg 801 0.00138384328392377 Inf 12 0 22 0 NM_030725 refGene chr2 93571606 + 76996 graph_last l 56 84 tctggttaca 802 0.00138384328392377 Inf 12 0 22 0 genomic chr9 72561130 - 0 unique_long l 39 57 tgacaagaca 803 0.00138384328392377 Inf 12 0 22 0 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 804 0.00138384328392377 Inf 12 0 22 0 ttgaagcata 805 0.00138384328392377 Inf 12 0 22 0 NM_019802 refGene chr6 73475733 - 113867 graph_last l 14 117 actgcttgcc 806 0.00144828479418316 0.166666666666667 3 18 6 19 ctgggcccag 807 0.00144828479418316 4.8 24 5 44 5 gtatttcata 808 0.00144828479418316 4.8 24 5 44 5 NM_011219 refGene chr6 22928921 + 110854 graph_last l 25 196 gtttttatct 809 0.00146406001048460 0.25 6 24 11 25 gactatatat 810 0.00146966899019043 0.296296296296296 8 27 14 28 NM_007839 refGene chr5 51468944 + 102762 graph_last l 27 99 atcgttgtaa 811 0.00148392610227347 0.210526315789474 4 19 7 20 NM_010911 refGene chr2 156770802 + 80726 graph_last 24 122 gccattggaa 812 0.00148392610227347 0.210526315789474 4 19 7 20 NM_021526 refGene chr2 62189433 + 75066 graph_last 19 96 tggatgtgct 813 0.00148392610227347 0.210526315789474 4 19 7 20 NM_025790 refGene chr13 24706246 - 33412 graph_last l 84 134 tcacctgcta 814 0.00154711201675686 6.66666666666667 20 3 36 3 ccacactgtc 815 0.00157214591944508 0.133333333333333 2 15 4 16 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 816 0.00157214591944508 0.133333333333333 2 15 4 16 gcaaaaaaaa 817 0.00157214591944508 0.133333333333333 2 15 4 16 NM_010376 refGene chr2 153447870 + 80390 graph_last l 18 113 gccgctaggc 818 0.00157214591944508 0.133333333333333 2 15 4 16 tgctgagaat 819 0.00158986856892421 0.484375 31 64 58 67 acccctgacc 820 0.00159562103394090 0.176470588235294 3 17 5 18 tcctcacggg 821 0.00159562103394090 0.176470588235294 3 17 5 18 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 822 0.00165280415670573 0.0833333333333333 1 12 2 13 agaagtgttt 823 0.00165280415670573 0.0833333333333333 1 12 2 13 NM_053092 refGene chr8 113687507 - 133540 graph_last 10 76 caactatggt 824 0.00165280415670573 0.0833333333333333 1 12 2 13 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 825 0.00165280415670573 0.0833333333333333 1 12 2 13 ggatggcaat 826 0.00165280415670573 0.0833333333333333 1 12 2 13 gggcagaggt 827 0.00165280415670573 0.0833333333333333 1 12 2 13 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 828 0.00165280415670573 0.0833333333333333 1 12 2 13 ttttatttgt 829 0.00165280415670573 0.0833333333333333 1 12 2 13 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 830 0.00173154266943443 2.29166666666667 55 24 101 25 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 831 0.00175816276847758 0.269230769230769 7 26 13 27 tccactgtgc 832 0.00176213119746764 2.29166666666667 55 24 102 25 NM_009725 refGene chr3 109064595 - 88118 graph_last 238 466 tggtgaagag 833 0.00177276813726076 2.55555555555556 46 18 85 19 ccctgcagct 834 0.00181628840306066 8.5 17 2 31 2 AK048138 knownGene chr15 80705321 - 48408 graph_last l 59 103 cgttccacca 835 0.00181628840306066 8.5 17 2 31 2 NM_015814 refGene chr7 104213348 - 124305 graph_last l 70 135 ggagcgctat 836 0.00181628840306066 8.5 17 2 31 2 NM_177561 refGene chr5_random 22663978 + 109446 graph_last l 43 79 ggccagagac 837 0.00181628840306066 15 15 1 27 1 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 838 0.00186033891762466 5.25 21 4 39 4 NM_007471 refGene chr16 86207437 + 55668 graph_last l 86 131 gcataagcaa 839 0.00186033891762466 5.25 21 4 39 4 NM_019535 refGene chr4 84058309 + 94668 graph_last l 76 184 gccagttttc 840 0.00186033891762466 5.25 21 4 39 4 caaaaataaa 841 0.00195177936656496 1.75438596491228 100 57 184 59 NM_008251 refGene chr16 98082681 - 56348 graph_last l 29 115 taataaaaat 842 0.00199863919871213 0.238095238095238 5 21 9 22 NM_009720 refGene chr11 55071811 - 20087 graph_last l 56 134 taataaagtc 843 0.00199863919871213 0.238095238095238 5 21 9 22 aactgaacaa 844 0.00199917095397555 0 0 9 0 9 acagggttgg 845 0.00199917095397555 0 0 9 0 9 acagtgggga 846 0.00199917095397555 0.285714285714286 8 28 15 29 NM_178060 refGene chr11 98352515 + 23676 graph_second l 6 31 agtctgtttc 847 0.00199917095397555 0 0 9 0 9 atgacaatag 848 0.00199917095397555 0 0 9 0 9 attgattaaa 849 0.00199917095397555 0 0 9 0 9 genomic chr11 53229377 + 0 unique_long l 3 44 cctaatgtct 850 0.00199917095397555 0 0 9 0 9 cggagaccct 851 0.00199917095397555 0 0 9 0 9 NM_080288 refGene chr13 20448883 + 33067 graph_last l 11 94 ctgtggaata 852 0.00199917095397555 0 0 9 0 9 ctttacctag 853 0.00199917095397555 0 0 9 0 9 NM_013834 refGene chr8 22347179 + 128587 graph_last 2 40 ctttccctgc 854 0.00199917095397555 0 0 9 0 9 gaatagataa 855 0.00199917095397555 0 0 9 0 9 NM_023873 refGene chr9 101742563 - 140690 graph_last 1 19 gagtgaaata 856 0.00199917095397555 0 0 9 0 9 NM_172659 refGene chr2 27289981 + 72975 graph_last l 7 38 ggcactgtcc 857 0.00199917095397555 0 0 9 0 9 T25556 all_est chr4 126054615 + 97288 graph_last 0 9 ggctaagtag 858 0.00199917095397555 0 0 9 0 9 ggcttgccag 859 0.00199917095397555 0 0 9 0 9 NM_053078 refGene chr18 33627973 + 63718 graph_last 0 18 ggtaaaatat 860 0.00199917095397555 0 0 9 0 9 ggtaaacaat 861 0.00199917095397555 0 0 9 0 9 NM_010140 refGene chr16 64232989 - 54754 graph_last 1 18 gttcatttag 862 0.00199917095397555 0 0 9 0 9 gttgaaatta 863 0.00199917095397555 0 0 9 0 9 CD536971 all_est chr9 46409029 - 137120 graph_last 0 19 tacatacact 864 0.00199917095397555 0 0 9 0 9 NM_008883 refGene chrX 63947316 + 149251 graph_last 1 20 tatagtccat 865 0.00199917095397555 0 0 9 0 9 tcacaatgag 866 0.00199917095397555 0 0 9 0 9 BC056180 knownGene chrX 135911933 - 151953 graph_last 0 21 tgccaaatac 867 0.00199917095397555 0 0 9 0 9 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 868 0.00206987560293861 0.090909090909091 1 11 1 11 attaattttg 869 0.00206987560293861 0.090909090909091 1 11 1 11 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 870 0.00206987560293861 4.6 23 5 42 5 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 871 0.00206987560293861 0.090909090909091 1 11 1 11 gagatgctgg 872 0.00206987560293861 0.090909090909091 1 11 1 11 gcgagaagcc 873 0.00206987560293861 0.090909090909091 1 11 1 11 NM_026708 refGene chr11 77752812 + 21919 graph_last 4 43 gctgactccg 874 0.00206987560293861 0.090909090909091 1 11 1 11 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 875 0.00206987560293861 0.090909090909091 1 11 1 11 gtgcttataa 876 0.00206987560293861 0.090909090909091 1 11 1 11 NM_008297 refGene chr10 59695541 + 12599 graph_last 0 13 gtggaaaatg 877 0.00206987560293861 0.090909090909091 1 11 1 11 actggtgact 878 0.00215553767856149 Inf 11 0 21 0 agatccagct 879 0.00215553767856149 Inf 11 0 21 0 NM_019699 refGene chr19 9946997 - 67959 graph_last l 31 182 agccaagaga 880 0.00215553767856149 0.291666666666667 7 24 12 25 agttacttat 881 0.00215553767856149 Inf 11 0 21 0 ataaaaactc 882 0.00215553767856149 Inf 11 0 21 0 NM_011341 refGene chr4 154126850 + 99835 graph_last l 28 62 atggtggttc 883 0.00215553767856149 Inf 11 0 21 0 gacacgggag 884 0.00215553767856149 Inf 11 0 21 0 NM_009308 refGene chr18 31773653 + 63593 graph_last l 23 112 gctacttaag 885 0.00215553767856149 0.291666666666667 7 24 12 25 NM_008593 refGene chr4 113815543 - 96269 graph_last 0 51 gcttgaaaaa 886 0.00215553767856149 Inf 11 0 21 0 NM_182839 refGene chr13 71586451 + 36077 graph_last l 37 107 ggtgttctga 887 0.00215553767856149 Inf 11 0 21 0 NM_025797 refGene chr18 84591883 + 66590 graph_last l 24 105 gtgatgtttc 888 0.00215553767856149 0.2 4 20 8 21 tacctattgt 889 0.00215553767856149 0.2 4 20 8 21 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 890 0.00215553767856149 0.2 4 20 8 21 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 891 0.00215553767856149 Inf 11 0 21 0 NM_022319 refGene chr9 99839060 - 140594 graph_last l 35 99 ttggtggtca 892 0.00215553767856149 0.2 4 20 8 21 NM_013928 refGene chr3 70232737 + 85733 graph_last l 62 248 gttccttggg 893 0.00218154047401637 0.333333333333333 11 33 21 34 NM_026757 refGene chr11 69809604 - 21121 graph_last l 84 286 gtgcgctaga 894 0.00222673351171097 4.16666666666667 25 6 46 6 NM_026147 refGene chr4 3762091 - 90957 graph_last 191 634 cctaccaaga 895 0.00224392703285211 0.533333333333333 40 75 73 78 NM_027350 refGene chr18 64667346 + 65455 graph_last l 173 288 ccgtgtgttc 896 0.00225969025709326 3.1 31 10 58 10 NM_027016 refGene chr3 31714208 + 83982 graph_last l 55 162 atgggtcatc 897 0.00228027242350398 6.33333333333333 19 3 35 3 AK034974 all_mrna chr2 53183992 + 74573 graph_last 0 77 atgttaaaaa 898 0.00234096847538984 0.153846153846154 2 13 3 14 NM_133215 refGene chr11 87176620 + 22801 graph_last l 15 62 caatgtgctg 899 0.00234096847538984 0.153846153846154 2 13 3 14 NM_007552 refGene chr2 18792200 + 72377 graph_last 0 60 cattcaaaaa 900 0.00234096847538984 0.153846153846154 2 13 3 14 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 901 0.00234096847538984 0.153846153846154 2 13 3 14 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 902 0.00234096847538984 0.153846153846154 2 13 3 14 NM_178624 refGene chr9 116584101 + 141769 graph_last l 13 60 gcaccagcag 903 0.00234096847538984 0.153846153846154 2 13 3 14 NM_199022 refGene chr2 125928154 - 78833 graph_last l 9 85 gtggaagcga 904 0.00234096847538984 0.153846153846154 2 13 3 14 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 905 0.00234096847538984 0.153846153846154 2 13 3 14 NM_011042 refGene chr15 104593003 + 50270 graph_last 85 352 gaaatgtaag 906 0.00236107941049252 0.44 22 50 41 52 NM_198894 refGene chr11 75988055 - 21730 graph_last l 94 280 tgagagggaa 907 0.00244736787516441 0.378378378378378 14 37 26 39 NM_183180 refGene chr2 93817607 + 77024 graph_last l 24 68 gtcactattt 908 0.00259390430474808 0.176470588235294 3 17 6 18 NM_007508 refGene chr16 44062095 - 53860 graph_last l 42 142 ctcagaaagc 909 0.00267522067685169 8 16 2 30 2 NM_013873 refGene chr15 85743411 + 48930 graph_second l 58 114 tgtggttcca 910 0.00267522067685169 8 16 2 30 2 aagaaaaaaa 911 0.00268476813216232 0.222222222222222 4 18 7 19 NM_145130 refGene chr6 126639248 + 116885 graph_last l 14 119 ccaggaattc 912 0.00268476813216232 0.222222222222222 4 18 7 19 NM_030019 refGene chr15 90975517 - 49256 graph_last l 86 162 gtacagccct 913 0.00268476813216232 5.25 21 4 38 4 NM_007421 refGene chr12 108213627 - 31438 graph_last 2 76 taaaattgtt 914 0.00268476813216232 0.222222222222222 4 18 7 19 tggacatttg 915 0.00268476813216232 0.222222222222222 4 18 7 19 agacaaagtt 916 0.00274648315715071 0.1875 3 16 5 17 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 917 0.00274648315715071 0.28 7 25 13 26 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 918 0.00274648315715071 0.1875 3 16 5 17 NM_008691 refGene chr14 59840834 + 42397 graph_last l 80 163 agtgaatgca 919 0.00283121885434828 14 14 1 26 1 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 920 0.00283121885434828 14 14 1 26 1 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 921 0.00283121885434828 14 14 1 26 1 AF031816 knownGene chr9 43684219 - 136913 graph_last l 43 91 gtgatagcgt 922 0.00283121885434828 14 14 1 26 1 NM_025936 refGene chr11 35449596 - 18948 graph_last l 26 105 tgcacacaag 923 0.00290979527629555 0.227272727272727 5 22 10 23 ttattaaaat 924 0.00290979527629555 0.227272727272727 5 22 10 23 NM_023735 refGene chr1 128078440 - 5827 graph_last l 56 214 aagaaaaagt 925 0.00293938146341523 0.405405405405405 15 37 27 39 caccaccaca 926 0.00293938146341523 0.405405405405405 15 37 27 39 gcctcctcct 927 0.00307988260486477 0.142857142857143 2 14 4 15 ggctatttta 928 0.00307988260486477 0.142857142857143 2 14 4 15 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 929 0.00307988260486477 0.142857142857143 2 14 4 15 tctgagtggt 930 0.00307988260486477 0.142857142857143 2 14 4 15 tgaagacagt 931 0.00307988260486477 0.142857142857143 2 14 4 15 NM_138660 refGene chr11 98417334 + 23682 graph_last l 10 51 tgtgttgttt 932 0.00307988260486477 0.142857142857143 2 14 4 15 ttttttttcc 933 0.00307988260486477 0.142857142857143 2 14 4 15 AK122380 knownGene chr8 84801596 + 131761 graph_last l 67 149 ctacagttcc 934 0.00320749093352198 4 24 6 44 6 NM_010223 refGene chr8 70802228 + 130947 graph_last l 148 335 gggtgcagcc 935 0.00339238536189691 3.71428571428571 26 7 48 7 aattcccttt 936 0.00349705653390734 0.090909090909091 1 11 2 12 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 937 0.00349705653390734 0.090909090909091 1 11 2 12 NM_009584 refGene chr5 19858012 + 100918 graph_last l 9 68 cgttggattc 938 0.00349705653390734 0.090909090909091 1 11 2 12 ctgcctgaga 939 0.00349705653390734 0.090909090909091 1 11 2 12 NM_023279 refGene chr8 125273626 - 134257 graph_last l 4 35 gagtgggggt 940 0.00349705653390734 0.090909090909091 1 11 2 12 NM_134012 refGene chr11 93530498 + 23125 graph_last 3 46 gatgtgaaaa 941 0.00349705653390734 0.090909090909091 1 11 2 12 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 942 0.00349705653390734 0.090909090909091 1 11 2 12 NM_133954 refGene chr8 96605505 - 132575 graph_last l 3 36 tgctctagaa 943 0.00349705653390734 0.090909090909091 1 11 2 12 NM_027310 refGene chr4 124067106 + 97120 graph_last l 10 64 tggtgtcgat 944 0.00349705653390734 0.090909090909091 1 11 2 12 tgtttcatac 945 0.00349705653390734 0.090909090909091 1 11 2 12 ttttctattt 946 0.00349705653390734 0.090909090909091 1 11 2 12 NM_028217 refGene chr16 33892019 - 53134 graph_last l 34 78 actgagattt 947 0.0035504936340106 Inf 11 0 20 0 caaagaaaac 948 0.0035504936340106 Inf 11 0 20 0 NM_028224 refGene chr15 101529366 + 49935 graph_last l 37 211 cacccggcca 949 0.0035504936340106 Inf 11 0 20 0 NM_178679 refGene chr10 69779847 - 13250 graph_last l 26 73 cggactatga 950 0.0035504936340106 Inf 11 0 20 0 ctgtaatgat 951 0.0035504936340106 6 18 3 34 3 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 952 0.0035504936340106 Inf 11 0 20 0 NM_009976 refGene chr2 149268091 + 80122 graph_last l 49 73 gcaggtactg 953 0.0035504936340106 Inf 11 0 20 0 NM_010731 refGene chr10 83522601 + 14167 graph_second l 29 88 gtgggatcga 954 0.0035504936340106 Inf 11 0 20 0 NM_175706 refGene chr2 22109787 + 72602 graph_last l 54 76 taaataacta 955 0.0035504936340106 Inf 11 0 20 0 tatgcctgtc 956 0.0035504936340106 Inf 11 0 20 0 tccctgtgta 957 0.0035504936340106 Inf 11 0 20 0 X57780 knownGene chrM 5236 - 142531 graph_second 45 97 tcgaattgca 958 0.0035504936340106 Inf 11 0 20 0 NM_177089 refGene chr8 24012895 - 128650 graph_last l 25 46 tgctgtaact 959 0.0035504936340106 Inf 11 0 20 0 tgtaacagga 960 0.00367239272976665 0.627118644067797 74 118 136 123 aagatcaaga 961 0.00367942496954504 1.86046511627907 80 43 147 45 NM_021278 refGene chrX 155230346 + 152783 graph_last l 30 91 caagttcttt 962 0.00370141678686530 0.210526315789474 4 19 8 20 cttctcattt 963 0.00372482956191592 0.425 17 40 31 42 NM_021391 refGene chr15 105855287 - 50401 graph_second l 59 182 gacactggat 964 0.00374629236962933 0.382352941176471 13 34 24 36 gggaaggcgg 965 0.00384865227169001 0.547945205479452 40 73 73 76 ggtcagtcgg 966 0.0038846348711999 0.32 8 25 14 26 NM_009782 refGene chr1 157842554 - 7363 graph_last l 34 121 ttggtcaggt 967 0.0038846348711999 0.32 8 25 14 26 ttgtaaaagg 968 0.0038846348711999 0.32 8 25 14 26 gcgaaggctg 969 0.00399230765914349 0.272727272727273 6 22 11 23 AK122280 knownGene chrX 84771967 - 150054 graph_last l 55 119 gccccagact 970 0.00403092301862844 5 20 4 37 4 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 971 0.00406305891343078 8 16 2 29 2 catcacacaa 972 0.00406305891343078 8 16 2 29 2 ccccagagcg 973 0.00406305891343078 8 16 2 29 2 NM_013874 refGene chr7 23389583 + 119824 graph_last l 36 114 gcggagcccc 974 0.00406305891343078 8 16 2 29 2 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 975 0.00406305891343078 1.84090909090909 81 44 149 46 NM_018873 refGene chr11 97094789 - 23526 graph_last l 52 102 taagcacaga 976 0.00439847098686628 4.4 22 5 40 5 NM_007471 refGene chr16 86207600 - 55668 graph_last l 75 198 tatctttgga 977 0.00439847098686628 4.4 22 5 40 5 NM_023348 refGene chr16 16883044 + 51909 graph_last l 69 88 cagtagataa 978 0.00442886594982379 13 13 1 24 1 ccctgacttc 979 0.00442886594982379 13 13 1 24 1 NM_030689 refGene chr15 81112482 - 48457 graph_last l 53 154 ggaagaggca 980 0.00442886594982379 13 13 1 24 1 tccctgtggt 981 0.00442886594982379 13 13 1 24 1 tcctgggacg 982 0.00442886594982379 13 13 1 24 1 tttgcagcat 983 0.00442886594982379 13 13 1 24 1 NM_025482 refGene chr2 181400858 + 82485 graph_last l 34 183 cctctgtttg 984 0.00444160117006131 0.291666666666667 7 24 13 25 aaaaagtacc 985 0.00457969553113342 14 14 1 25 1 aagacccacc 986 0.00457969553113342 3.83333333333333 23 6 43 6 NM_011129 refGene chr11 87150159 + 22798 graph_last l 63 154 acccggctag 987 0.00457969553113342 14 14 1 25 1 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 988 0.00457969553113342 14 14 1 25 1 NM_010595 refGene chr6 128564638 - 117035 graph_last l 78 117 atctgttcat 989 0.00457969553113342 14 14 1 25 1 cgcacacaca 990 0.00457969553113342 3.83333333333333 23 6 43 6 cttgcaatct 991 0.00457969553113342 14 14 1 25 1 gcaatctgat 992 0.00457969553113342 1.83720930232558 79 43 145 45 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 993 0.00457969553113342 14 14 1 25 1 gcaggacatt 994 0.00457969553113342 3.83333333333333 23 6 43 6 gtgatattta 995 0.00457969553113342 3.83333333333333 23 6 43 6 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 996 0.00457969553113342 14 14 1 25 1 ttctggcctg 997 0.00457969553113342 14 14 1 25 1 NM_183187 refGene chr14 3580574 - 38877 graph_last l 92 123 ttttacctaa 998 0.00457969553113342 14 14 1 25 1 NM_019581 refGene chr17 45564171 + 59534 graph_last 1 40 aactcaggga 999 0.00458493835391225 0.1 1 10 1 10 atgatcaaaa 1000 0.00458493835391225 0.1 1 10 1 10 NM_134167 refGene chr6 67277823 - 113470 graph_last 0 32 atgctaaaaa 1001 0.00458493835391225 0.1 1 10 1 10 NM_027287 refGene chr3 156149277 + 90410 graph_last l 3 24 attattgtaa 1002 0.00458493835391225 0.1 1 10 1 10 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 1003 0.00458493835391225 0.1 1 10 1 10 BC050210 knownGene chr1 37245345 - 1535 graph_last 1 18 ctatggatac 1004 0.00458493835391225 0.1 1 10 1 10 ggtcacatct 1005 0.00458493835391225 0.1 1 10 1 10 NM_009468 refGene chr18 43986451 - 64437 graph_last 0 11 gtgctttcat 1006 0.00458493835391225 0.1 1 10 1 10 taagaagcag 1007 0.00458493835391225 0.1 1 10 1 10 NM_027882 refGene chr7 28684262 - 120189 graph_last l 4 31 tatgattacc 1008 0.00458493835391225 0.1 1 10 1 10 ttagactcaa 1009 0.00458493835391225 0.1 1 10 1 10 NM_173396 refGene chr2 157499191 + 80813 graph_last l 110 176 gtacaataca 1010 0.00460260704706533 3.57142857142857 25 7 46 7 NM_009468 refGene chr18 43985320 + 64437 graph_last 0 19 actgcatcag 1011 0.00461034559407189 0 0 8 0 8 NM_009846 refGene chr10 45183750 - 12083 graph_last 1 11 agaagttact 1012 0.00461034559407189 0 0 8 0 8 NM_009178 refGene chr9 35830752 - 136355 graph_last l 8 28 agaataaaga 1013 0.00461034559407189 0 0 8 0 8 NM_007944 refGene chr8 72752711 - 131158 graph_last l 8 46 atgtatgcat 1014 0.00461034559407189 0 0 8 0 8 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 1015 0.00461034559407189 0.1875 3 16 6 17 NM_011353 refGene chr13 98562216 - 37374 graph_last 0 12 caaggtcagt 1016 0.00461034559407189 0 0 8 0 8 NM_025396 refGene chr8 71933405 + 131081 graph_last l 28 185 cacgccgtgg 1017 0.00461034559407189 0.238095238095238 5 21 10 22 cagggcgatg 1018 0.00461034559407189 0 0 8 0 8 ccaggagagg 1019 0.00461034559407189 0.238095238095238 5 21 10 22 AK090280 knownGene chr2 152838534 + 80332 graph_last 2 15 ctaaatcttt 1020 0.00461034559407189 0 0 8 0 8 cttaaataaa 1021 0.00461034559407189 0 0 8 0 8 AA939921 all_est chr1 74612962 + 3544 graph_second 0 16 ctttggctga 1022 0.00461034559407189 0 0 8 0 8 gaaagggagg 1023 0.00461034559407189 0 0 8 0 8 NM_029077 refGene chr4 45792216 + 92915 graph_last 3 33 gaagaatccg 1024 0.00461034559407189 0 0 8 0 8 NM_015753 refGene chr2 45287448 - 74261 graph_last 0 20 gagagaattg 1025 0.00461034559407189 0 0 8 0 8 NM_198615 refGene chr10 82726391 - 14085 graph_last 1 17 gattgtgctg 1026 0.00461034559407189 0 0 8 0 8 NM_007909 refGene chr10 82534171 + 14055 graph_last 1 27 gcgagtggtg 1027 0.00461034559407189 0 0 8 0 8 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 1028 0.00461034559407189 0.1875 3 16 6 17 NM_010562 refGene chr7 97874520 + 123908 graph_last l 55 216 ggagggatca 1029 0.00461034559407189 0.238095238095238 5 21 10 22 NM_009234 refGene chr12 21780471 + 26716 graph_second 0 17 gtcagagaga 1030 0.00461034559407189 0 0 8 0 8 NM_020601 refGene chrX 67445347 + 149423 graph_last l 4 27 gtcctctttc 1031 0.00461034559407189 0 0 8 0 8 NM_010721 refGene chr18 57123858 + 65070 graph_last 2 19 gtgactagat 1032 0.00461034559407189 0 0 8 0 8 gtggcggcga 1033 0.00461034559407189 0 0 8 0 8 gtgttgtcgg 1034 0.00461034559407189 0.1875 3 16 6 17 NM_199143 refGene chr6 55350900 + 112950 graph_last 1 13 tagagctgtc 1035 0.00461034559407189 0 0 8 0 8 NM_173437 refGene chr1 138354334 - 6521 graph_last l 3 27 tctccatcca 1036 0.00461034559407189 0 0 8 0 8 tgaaaccgcg 1037 0.00461034559407189 0 0 8 0 8 ttccttgttc 1038 0.00461034559407189 0 0 8 0 8 ttgctgcctt 1039 0.00461034559407189 0 0 8 0 8 NM_010160 refGene chr2 6463548 - 71738 graph_last l 23 80 ttggtgcttc 1040 0.00461034559407189 0.238095238095238 5 21 10 22 ttttaaaata 1041 0.00461034559407189 0.1875 3 16 6 17 NM_175255 refGene chr11 51417047 + 19792 graph_last l 4 67 caataaaaca 1042 0.00465212503765463 0.166666666666667 2 12 3 13 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 1043 0.00465212503765463 0.166666666666667 2 12 3 13 gaacatattt 1044 0.00465212503765463 0.166666666666667 2 12 3 13 ggataaatgc 1045 0.00465212503765463 0.166666666666667 2 12 3 13 ggttttgttt 1046 0.00465212503765463 0.166666666666667 2 12 3 13 BG069541 all_est chr4 122403918 + 96951 graph_last 0 56 gtggttgaaa 1047 0.00465212503765463 0.166666666666667 2 12 3 13 NM_080595 refGene chr11 4967702 + 17352 graph_last l 25 153 ctcacaaggg 1048 0.00467972399423615 0.321428571428571 9 28 17 29 NM_026467 refGene chr9 69425322 + 138888 graph_last l 20 143 cacagactgt 1049 0.00468085583599213 0.2 3 15 5 16 gccaaaccaa 1050 0.00468085583599213 0.2 3 15 5 16 gtgccaggaa 1051 0.00468085583599213 0.2 3 15 5 16 NM_173784 refGene chr11 32416958 + 18750 graph_last l 10 58 gtgctggtaa 1052 0.00468085583599213 0.2 3 15 5 16 genomic chr13 54365790 + 0 unique_long l 16 52 tacaattgtc 1053 0.00468085583599213 0.2 3 15 5 16 NM_026313 refGene chr11 93874843 - 23162 graph_last l 64 190 tggagcagac 1054 0.00468085583599213 0.34375 11 32 21 33 AK005167 knownGene chr7 24244951 + 119924 graph_last l 55 397 actcctgtcc 1055 0.00469681057304063 0.439024390243902 18 41 33 43 NM_029810 refGene chr19 47024121 + 70244 graph_last l 46 157 acgcatctgt 1056 0.00470309978787786 0.333333333333333 10 30 19 31 gagtcactct 1057 0.0048707738071053 5.66666666666667 17 3 32 3 NM_013928 refGene chr3 70232604 - 85733 graph_last l 56 76 tattttgact 1058 0.0048707738071053 5.66666666666667 17 3 32 3 AK122204 knownGene chr2 92236623 + 76871 graph_last l 43 102 agacaactaa 1059 0.00530346116494546 0.304347826086957 7 23 12 24 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 1060 0.00566830203268665 Inf 10 0 18 0 genomic chr11 74745310 + 0 unique_long l 21 26 agtggtgaac 1061 0.00566830203268665 Inf 10 0 18 0 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 1062 0.00566830203268665 Inf 10 0 18 0 genomic chr4 136999969 + 0 unique_long l 13 41 cctatacgtc 1063 0.00566830203268665 Inf 10 0 18 0 genomic chr10 6761017 - 0 unique_long l 27 32 cctcatttcc 1064 0.00566830203268665 Inf 10 0 18 0 NM_008614 refGene chr9 122556298 + 142162 graph_last b 88 767 cgcagcgttg 1065 0.00566830203268665 Inf 10 0 18 0 NM_009793 refGene chr18 33368672 + 63709 graph_last l 22 47 ctctgaagga 1066 0.00566830203268665 Inf 10 0 18 0 ctgggacagc 1067 0.00566830203268665 Inf 10 0 18 0 ctttgcaatg 1068 0.00566830203268665 0.375 12 32 22 33 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 1069 0.00566830203268665 Inf 10 0 18 0 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 1070 0.00566830203268665 Inf 10 0 18 0 NM_010638 refGene chr19 23310804 + 68718 graph_last l 26 47 gtagccctaa 1071 0.00566830203268665 Inf 10 0 18 0 NM_145501 refGene chr19 42171628 + 69870 graph_last l 19 39 gtggtagccc 1072 0.00566830203268665 Inf 10 0 18 0 genomic chr3 33848407 - 0 unique_long l 19 30 tcactgtcag 1073 0.00566830203268665 Inf 10 0 18 0 NM_153139 refGene chr11 54861387 + 20071 graph_last l 28 51 tcagagcttc 1074 0.00566830203268665 Inf 10 0 18 0 NM_175752 refGene chr2 74005861 - 75776 graph_last l 17 24 tctaactcca 1075 0.00566830203268665 Inf 10 0 18 0 genomic chr2 167715885 - 0 unique_long l 23 39 tctgtctttt 1076 0.00566830203268665 Inf 10 0 18 0 NM_008617 refGene chr5 134618530 + 107726 graph_last l 110 325 tctttggaac 1077 0.00566830203268665 2.81818181818182 31 11 58 11 genomic chrM 5841 + 0 unique_long l 160 1099 aaacccccag 1078 0.0056695426196415 Inf 10 0 19 0 aagatgcatt 1079 0.0056695426196415 Inf 10 0 19 0 AK009517 knownGene chr11 69352719 - 21062 graph_last l 16 28 acttcctcag 1080 0.0056695426196415 Inf 10 0 19 0 atagtgtaaa 1081 0.0056695426196415 Inf 10 0 19 0 atgtgtgcaa 1082 0.0056695426196415 Inf 10 0 19 0 cacaatgtga 1083 0.0056695426196415 Inf 10 0 19 0 genomic chr3 130443077 + 0 unique_long l 24 48 caggtattag 1084 0.0056695426196415 Inf 10 0 19 0 NM_177296 refGene chr6 29392712 - 111132 graph_last 19 58 caggttgaca 1085 0.0056695426196415 Inf 10 0 19 0 BC044772 knownGene chr12 19510819 + 26628 graph_last l 43 59 ctgtttttac 1086 0.0056695426196415 Inf 10 0 19 0 NM_018880 refGene chr7 97743662 - 123901 graph_last l 45 78 gagggacgga 1087 0.0056695426196415 Inf 10 0 19 0 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 1088 0.0056695426196415 Inf 10 0 19 0 ggggcacctg 1089 0.0056695426196415 Inf 10 0 19 0 taattttttt 1090 0.0056695426196415 0.263157894736842 5 19 9 20 tgaaataaaa 1091 0.0056695426196415 0.263157894736842 5 19 9 20 genomic chr18 36478939 + 0 unique_long l 36 52 tgctttataa 1092 0.0056695426196415 Inf 10 0 19 0 gtgactcaca 1093 0.0057588327709225 5 20 4 36 4 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 1094 0.00579701025364297 0.366666666666667 11 30 20 31 NM_027360 refGene chr12 107529636 - 31397 graph_last 192 512 gaacatcact 1095 0.0059584974525249 0.48 24 50 44 52 NM_026989 refGene chr3 162250930 - 90688 graph_last l 29 58 aagagagtgc 1096 0.00597692395655217 7.5 15 2 28 2 tcctgaaata 1097 0.0060990461617445 2.07692307692308 54 26 100 27 taaaccactg 1098 0.00612559232401123 4.2 21 5 39 5 NM_198613 refGene chr7 13784132 + 119083 graph_last l 87 238 cagttcgatg 1099 0.00623111732909895 3.25 26 8 48 8 NM_178923 refGene chr16 91561773 - 55890 graph_last 74 327 cttccccggg 1100 0.00623111732909895 3.25 26 8 48 8 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 1101 0.00623111732909895 3.25 26 8 48 8 gggtggggtg 1102 0.00635577876235652 0.285714285714286 6 21 11 22 NM_011879 refGene chr18 36874885 + 64015 graph_last l 54 121 ttccattaaa 1103 0.00635577876235652 0.285714285714286 6 21 11 22 NM_033474 refGene chr16 18012617 - 52029 graph_last l 28 66 caaaccacta 1104 0.00641858078679043 12 12 1 23 1 NM_178655 refGene chr3 130442791 - 89080 graph_last l 30 61 ccctatgtcg 1105 0.00641858078679043 12 12 1 23 1 gacacccagg 1106 0.00641858078679043 12 12 1 23 1 NM_008095 refGene chr5 128802540 - 107251 graph_last l 24 81 gctggctagg 1107 0.00641858078679043 12 12 1 23 1 NM_008942 refGene chr11 96790213 - 23504 graph_second l 35 96 ggaaccgacc 1108 0.00641858078679043 12 12 1 23 1 genomic chr18 6427244 - 0 unique_long l 28 108 gtgaaacgct 1109 0.00641858078679043 12 12 1 23 1 NM_013783 refGene chr4 153012039 - 99695 graph_last l 33 122 gtgtgccgct 1110 0.00641858078679043 12 12 1 23 1 NM_011844 refGene chr6 90281126 + 114831 graph_last 41 102 tgagcatcgg 1111 0.00641858078679043 12 12 1 23 1 tggtggaatg 1112 0.00641858078679043 12 12 1 23 1 NM_175229 refGene chr17 23399125 + 57745 graph_last l 32 111 ttgctggaaa 1113 0.00641858078679043 12 12 1 23 1 NM_010771 refGene chr18 35750017 + 63875 graph_last l 102 298 tataatctgt 1114 0.00662145684563619 0.465116279069767 20 43 36 45 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 1115 0.00689355700222794 0.354838709677419 11 31 21 32 NM_023336 refGene chr2 27714652 - 73019 graph_last l 8 50 aacctttctc 1116 0.00702300107218871 0.090909090909091 1 11 2 11 genomic chr4 123480209 - 0 unique_long l 3 22 caaataaaag 1117 0.00702300107218871 0.090909090909091 1 11 2 11 cctgaatgac 1118 0.00702300107218871 0.090909090909091 1 11 2 11 NM_026156 refGene chr8 3586476 + 127592 graph_last 2 35 ctgtgggggg 1119 0.00702300107218871 0.090909090909091 1 11 2 11 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 1120 0.00702300107218871 0.090909090909091 1 11 2 11 NM_021789 refGene chr9 46174510 - 137077 graph_last l 7 57 gacgtgaatg 1121 0.00702300107218871 0.090909090909091 1 11 2 11 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 1122 0.00702300107218871 0.090909090909091 1 11 2 11 NM_025985 refGene chr11 72257703 + 21283 graph_last l 5 25 tgatgggtgc 1123 0.00702300107218871 0.090909090909091 1 11 2 11 NM_028146 refGene chr8 125356919 - 134273 graph_last l 5 47 tgcacaaaga 1124 0.00702300107218871 0.090909090909091 1 11 2 11 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 1125 0.00702300107218871 0.090909090909091 1 11 2 11 NM_025303 refGene chr1 16398839 - 594 graph_last l 17 47 ttggaatcca 1126 0.00702300107218871 0.090909090909091 1 11 2 11 gttctttcgt 1127 0.0070321981561061 0.32 8 25 15 26 gtacatactg 1128 0.0071832356138028 2.3 46 20 84 21 gttctgacag 1129 0.00719782986020138 0.235294117647059 4 17 7 18 taaaagttgt 1130 0.00719782986020138 0.235294117647059 4 17 7 18 taaatgtcct 1131 0.00719782986020138 0.235294117647059 4 17 7 18 NM_175543 refGene chr11 79268990 + 22077 graph_last l 39 112 gggctgggcc 1132 0.00722635359740844 5.66666666666667 17 3 31 3 NM_018804 refGene chr3 90895018 - 86721 graph_last l 44 123 tttatggaca 1133 0.00722635359740844 5.66666666666667 17 3 31 3 agaggtgtag 1134 0.00726660708893407 0.411764705882353 14 34 26 36 gtgaacgtgc 1135 0.00727225769378323 0.25 5 20 10 21 NM_133195 refGene chr18 26104576 - 63468 graph_last l 50 115 acataaagat 1136 0.00826271728178001 4.5 18 4 34 4 NM_010890 refGene chr9 75258934 + 139403 graph_last l 4 62 aaaacatctc 1137 0.00841267093372045 0.2 3 15 6 16 tccaactcct 1138 0.00841267093372045 0.2 3 15 6 16 NM_007637 refGene chr15 31931318 + 46012 graph_last l 50 193 tcatagaaac 1139 0.00850356212158879 0.387096774193548 12 31 22 32 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 1140 0.00854292674393951 0.214285714285714 3 14 5 15 NM_182650 refGene chr6 51936062 - 112726 graph_last l 32 83 gacaagtata 1141 0.00854292674393951 0.214285714285714 3 14 5 15 NM_053076 refGene chr19 7419353 - 67781 graph_last l 14 98 tgttggttga 1142 0.00854292674393951 0.214285714285714 3 14 5 15 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 1143 0.00879742349258058 Inf 9 0 17 0 NM_172563 refGene chr11 89923502 - 22996 graph_last l 17 30 accagaatat 1144 0.00879742349258058 Inf 9 0 17 0 NM_024495 refGene chr3 15111673 + 83194 graph_last l 63 134 agacaaactg 1145 0.00879742349258058 Inf 9 0 17 0 genomic chr3 90896443 + 0 unique_long l 22 40 atcttactac 1146 0.00879742349258058 Inf 9 0 17 0 NM_016866 refGene chr2 68553403 - 75378 graph_second 0 34 atgtagttat 1147 0.00879742349258058 Inf 9 0 17 0 NM_016862 refGene chr19 55509561 - 70624 graph_last 1 73 cacacactca 1148 0.00879742349258058 Inf 9 0 17 0 cacagctctg 1149 0.00879742349258058 Inf 9 0 17 0 NM_177664 refGene chr3 120658581 - 88683 graph_last l 26 37 cggtattata 1150 0.00879742349258058 Inf 9 0 17 0 cttctcttgt 1151 0.00879742349258058 Inf 9 0 17 0 BQ178924 all_est chr13 51168087 - 34869 graph_last l 37 82 gaactggcgg 1152 0.00879742349258058 Inf 9 0 17 0 gagaaatcag 1153 0.00879742349258058 Inf 9 0 17 0 NM_008429 refGene chr1 176179918 - 8554 graph_last l 25 37 gagagactta 1154 0.00879742349258058 Inf 9 0 17 0 NM_008791 refGene chr16 98535719 + 56369 graph_last l 36 102 gatgcaccag 1155 0.00879742349258058 Inf 9 0 17 0 gcctaagact 1156 0.00879742349258058 Inf 9 0 17 0 genomic chr13 54163511 - 0 unique_long l 21 43 ggcttcttct 1157 0.00879742349258058 Inf 9 0 17 0 NM_009946 refGene chr13 54162183 + 35031 graph_last l 15 34 gggaagatgc 1158 0.00879742349258058 Inf 9 0 17 0 NM_008910 refGene chr12 68703041 + 28812 graph_last l 61 75 tagaaaatca 1159 0.00879742349258058 Inf 9 0 17 0 NM_133241 refGene chr15 90621058 - 49218 graph_last l 44 102 taggagcaaa 1160 0.00879742349258058 Inf 9 0 17 0 NM_009115 refGene chr10 78400956 + 13741 graph_last l 78 132 tctgacctgc 1161 0.00879742349258058 Inf 9 0 17 0 NM_172859 refGene chr2 144543036 - 79873 graph_last l 56 93 tgtgttataa 1162 0.00879742349258058 Inf 9 0 17 0 genomic chr13 90093357 - 0 unique_long l 19 33 ttaggtgagg 1163 0.00879742349258058 Inf 9 0 17 0 NM_019978 refGene chr3 56947015 + 85071 graph_last l 80 133 ttcttaaact 1164 0.00879742349258058 4 20 5 37 5 tttttaagca 1165 0.00879742349258058 Inf 9 0 17 0 tgtgaatgat 1166 0.0088777681854559 0.432432432432432 16 37 30 39 NM_010585 refGene chr6 110248654 + 115887 graph_last l 39 60 atttcttttc 1167 0.00909728910570015 7 14 2 26 2 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 1168 0.00909728910570015 7 14 2 26 2 cccagcccac 1169 0.00909728910570015 7 14 2 26 2 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 1170 0.00909728910570015 7 14 2 26 2 NM_008691 refGene chr14 59839646 + 42397 graph_last l 111 177 ggaaaaatag 1171 0.00909728910570015 7 14 2 26 2 NM_134150 refGene chr19 7190511 - 67742 graph_last l 96 232 tggggtctca 1172 0.00909728910570015 4.2 21 5 38 5 gtctcttcac 1173 0.00912239545492676 3.66666666666667 22 6 41 6 NM_130884 refGene chr2 130530736 + 79145 graph_last l 10 66 aatgataaaa 1174 0.00935072034441576 0.181818181818182 2 11 3 12 NM_026499 refGene chr2 163549271 + 81143 graph_last l 12 46 agtgtgaaac 1175 0.00935072034441576 0.181818181818182 2 11 3 12 NM_009861 refGene chr4 136099316 - 98237 graph_last l 16 71 attctttata 1176 0.00935072034441576 0.181818181818182 2 11 3 12 NM_153457 refGene chr12 68119077 + 28767 graph_last l 53 116 cacttttttt 1177 0.00935072034441576 7.5 15 2 27 2 NM_183172 refGene chr10 87338202 + 14472 graph_last l 5 39 cgcatacata 1178 0.00935072034441576 0.181818181818182 2 11 3 12 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 1179 0.00935072034441576 0.181818181818182 2 11 3 12 NM_009338 refGene chr17 13147732 + 57147 graph_last l 4 60 gggattcggc 1180 0.00935072034441576 0.181818181818182 2 11 3 12 tcagccatcg 1181 0.00935072034441576 0.181818181818182 2 11 3 12 tgagcatact 1182 0.00935072034441576 0.181818181818182 2 11 3 12 NM_175400 refGene chr2 4826964 + 71584 graph_last l 4 73 ttggaaccct 1183 0.00935072034441576 0.181818181818182 2 11 3 12 NM_021713 refGene chr15 104421295 + 50250 graph_last 56 226 gaaatgatga 1184 0.00956090211415772 0.375 12 32 23 33 attaatcaaa 1185 0.00966298286748532 0.153846153846154 2 13 4 14 cagagctccc 1186 0.00966298286748532 0.153846153846154 2 13 4 14 NM_183252 refGene chr1 43390024 + 1858 graph_last l 11 51 cctaaagatt 1187 0.00966298286748532 0.153846153846154 2 13 4 14 gaacttaaag 1188 0.00966298286748532 0.153846153846154 2 13 4 14 ggcatttgct 1189 0.00966298286748532 0.153846153846154 2 13 4 14 NM_025520 refGene chr6 57159890 - 113026 graph_last 7 60 gttattttgg 1190 0.00966298286748532 0.153846153846154 2 13 4 14 tctgtccagt 1191 0.00966298286748532 0.153846153846154 2 13 4 14 NM_027882 refGene chr7 28683135 + 120189 graph_last l 11 77 tgcaatattt 1192 0.00966298286748532 0.153846153846154 2 13 4 14 NM_178917 refGene chr2_random 1824269 - 82583 graph_last l 13 59 tgggaaatga 1193 0.00966298286748532 0.153846153846154 2 13 4 14 tgtatgtctg 1194 0.00966298286748532 0.153846153846154 2 13 4 14 NM_026729 refGene chr11 114916501 + 25076 graph_last l 7 62 aatcactggc 1195 0.00967092097836133 0.111111111111111 1 9 1 9 genomic chr19 46300922 - 0 unique_long l 4 44 actcaaatgg 1196 0.00967092097836133 0.111111111111111 1 9 1 9 actgtgtctt 1197 0.00967092097836133 0.111111111111111 1 9 1 9 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 1198 0.00967092097836133 0.111111111111111 1 9 1 9 NM_009481 refGene chrX 11203087 - 147308 graph_last l 10 41 catctgtgta 1199 0.00967092097836133 0.111111111111111 1 9 1 9 NM_133699 refGene chr12 17676661 + 26516 graph_last l 29 105 cggccactgg 1200 0.00967092097836133 0.111111111111111 1 9 1 9 NM_025412 refGene chr15 77603606 - 48102 graph_last l 4 50 ctggcgtgag 1201 0.00967092097836133 0.111111111111111 1 9 1 9 gaaaaaatat 1202 0.00967092097836133 0.111111111111111 1 9 1 9 gcctgtttgt 1203 0.00967092097836133 0.111111111111111 1 9 1 9 gggatgctct 1204 0.00967092097836133 0.111111111111111 1 9 1 9 NM_177583 refGene chr9 69250717 - 138875 graph_last l 7 33 gtaagtcttg 1205 0.00967092097836133 0.111111111111111 1 9 1 9 gtgaatagat 1206 0.00967092097836133 0.111111111111111 1 9 1 9 NM_146170 refGene chr6 87846637 + 114579 graph_last l 5 25 taatatagat 1207 0.00967092097836133 0.111111111111111 1 9 1 9 genomic chr5 62944198 + 0 unique_long l 7 25 tagtgtgtga 1208 0.00967092097836133 0.111111111111111 1 9 1 9 NM_025847 refGene chr14 25660492 + 40115 graph_last l 10 31 tatgtatcat 1209 0.00967092097836133 0.111111111111111 1 9 1 9 ttatcctgtc 1210 0.00967092097836133 0.111111111111111 1 9 1 9 NM_008634 refGene chr13 97881760 - 37324 graph_last 35 132 aaaccagagc 1211 0.00979569360439625 12 12 1 22 1 NM_009964 refGene chr9 52793169 + 137579 graph_last l 59 106 gcttcatctc 1212 0.00979569360439625 12 12 1 22 1 ggagatgata 1213 0.00979569360439625 12 12 1 22 1 NM_010581 refGene chr16 50230898 + 54180 graph_last l 36 106 gtcctgtgac 1214 0.00979569360439625 12 12 1 22 1 tatcatcttt 1215 0.00979569360439625 12 12 1 22 1 NM_029738 refGene chr16 3374181 + 51019 graph_last l 57 80 tgattttcat 1216 0.00979569360439625 12 12 1 22 1 tgccttgtcc 1217 0.00979569360439625 12 12 1 22 1 tgtatgtgtt 1218 0.00979569360439625 12 12 1 22 1 tttattaaat 1219 0.00979569360439625 12 12 1 22 1 cgggagatgc 1220 0.0098806257774001 0.63 63 100 116 104 NM_153808 refGene chr19 23452625 + 68731 graph_last 0 137 ttcaaaaaaa 1221 0.0101826486119054 0.235294117647059 4 17 8 18 AK028542 knownGene chr1 139190833 - 6589 graph_last l 26 97 gcaccaactg 1222 0.0103653401942079 0.3 6 20 11 21 NM_019565 refGene chr12 112090750 + 31588 graph_last 1 28 aaaaaaacta 1223 0.0105971484157129 0 0 7 0 7 NM_022885 refGene chr13 99234699 - 37436 graph_second 0 21 aataaaattg 1224 0.0105971484157129 0 0 7 0 7 NM_009308 refGene chr18 31773220 - 63593 graph_last 1 28 acgtatttaa 1225 0.0105971484157129 0 0 7 0 7 cacgaccatc 1226 0.0105971484157129 0 0 7 0 7 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 1227 0.0105971484157129 0 0 7 0 7 cagtctctca 1228 0.0105971484157129 0.5 24 48 44 50 NM_009238 refGene chr13 28837201 + 33570 graph_last 0 19 ccataggact 1229 0.0105971484157129 0 0 7 0 7 cgagagatcg 1230 0.0105971484157129 0 0 7 0 7 NM_010064 refGene chr2 71604438 - 75596 graph_last l 11 32 cggggaggga 1231 0.0105971484157129 0 0 7 0 7 NM_134037 refGene chr11 100060301 + 23847 graph_last 1 23 gaacatttca 1232 0.0105971484157129 0 0 7 0 7 gagaaaggag 1233 0.0105971484157129 0 0 7 0 7 genomic chr18 66302496 + 0 unique_long l 2 11 gatgtaatac 1234 0.0105971484157129 0 0 7 0 7 gattgttgat 1235 0.0105971484157129 0 0 7 0 7 NM_181595 refGene chr6 4868718 + 110051 graph_last l 46 80 ggagaaacag 1236 0.0105971484157129 5.33333333333333 16 3 30 3 NM_016916 refGene chr2 158187406 + 80890 graph_second l 6 21 ggagccagtg 1237 0.0105971484157129 0 0 7 0 7 ggcacatcca 1238 0.0105971484157129 0 0 7 0 7 NM_173756 refGene chr12 80417864 + 29742 graph_last 0 16 ggctggaaga 1239 0.0105971484157129 0 0 7 0 7 gtggggttct 1240 0.0105971484157129 0 0 7 0 7 NM_013691 refGene chr3 91452443 - 86787 graph_last 2 61 gttggagcag 1241 0.0105971484157129 0 0 7 0 7 NM_019413 refGene chr16 74181707 + 55087 graph_last 1 29 taagaaacct 1242 0.0105971484157129 0 0 7 0 7 NM_007935 refGene chr18 6648598 + 62583 graph_last l 2 10 taatgccctg 1243 0.0105971484157129 0 0 7 0 7 NM_177364 refGene chr11 32326332 + 18741 graph_last 2 29 tagagactgt 1244 0.0105971484157129 0 0 7 0 7 tagcgtctca 1245 0.0105971484157129 0 0 7 0 7 tatatgacta 1246 0.0105971484157129 0 0 7 0 7 NM_029979 refGene chr14 58039479 - 42269 graph_last 5 18 tcagttgtgg 1247 0.0105971484157129 0 0 7 0 7 genomic chr13 55251078 - 0 unique_long l 6 26 tctgttaata 1248 0.0105971484157129 0 0 7 0 7 NM_009846 refGene chr10 45182952 + 12083 graph_last 2 32 tgccaggcaa 1249 0.0105971484157129 0 0 7 0 7 NM_009079 refGene chr4 150447157 - 99566 graph_second 0 31 tgtcagccac 1250 0.0105971484157129 0 0 7 0 7 ttaaagtaat 1251 0.0105971484157129 0 0 7 0 7 NM_175549 refGene chr16 75033921 - 55150 graph_last 2 20 tttatacact 1252 0.0105971484157129 0 0 7 0 7 NM_025626 refGene chr2 3700042 + 71506 graph_last 0 16 tttgcttcct 1253 0.0105971484157129 0 0 7 0 7 ttttaagtac 1254 0.0105971484157129 0 0 7 0 7 gtttcacttt 1255 0.0114108727091359 3 27 9 49 9 gacattgatt 1256 0.0116085703607991 2.75 33 12 60 13 gattagggtg 1257 0.0116085703607991 0.263157894736842 5 19 10 20 NM_029979 refGene chr14 58039927 + 42269 graph_last l 27 94 tttgctgtgt 1258 0.0116085703607991 0.263157894736842 5 19 10 20 NM_026369 refGene chr1 156203375 + 7249 graph_last b 20 105 atttcccgag 1259 0.0116703451838249 0.25 4 16 7 17 X57780 knownGene chrM 6812 - 142531 graph_second 74 139 aagtcattct 1260 0.0122278396481056 4 20 5 36 5 ggtgagcctg 1261 0.0122278396481056 4 20 5 36 5 NM_145544 refGene chr3 142849874 - 89852 graph_last l 101 164 taagtgaaaa 1262 0.0122278396481056 4 20 5 36 5 NM_013681 refGene chr6 116901195 + 116249 graph_last l 100 219 ctggagatgt 1263 0.0124276717748262 3.5 21 6 39 6 agacaagctg 1264 0.0126662704300738 0.333333333333333 7 21 12 22 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 1265 0.0126746763643145 3.28571428571429 23 7 43 7 AK084022 knownGene chr11 60723328 - 20505 graph_last l 38 149 tgaacctgag 1266 0.0132154999308212 0.347826086956522 8 23 14 24 gttgtgattt 1267 0.0133293186431522 0.36 9 25 16 26 aagagaaacc 1268 0.0133616156002845 7 14 2 25 2 aagagtcttt 1269 0.0133616156002845 7 14 2 25 2 NM_177274 refGene chr3 161475192 + 90591 graph_last l 51 77 agtatttatg 1270 0.0133616156002845 7 14 2 25 2 genomic chr16 6893620 + 0 unique_long l 16 39 aagctactgg 1271 0.0136222168113882 Inf 9 0 16 0 genomic chr7 114715612 + 0 unique_long l 15 27 aatcagacct 1272 0.0136222168113882 Inf 9 0 16 0 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 1273 0.0136222168113882 0.387096774193548 12 31 23 32 NM_183154 refGene chr12 79621565 + 29644 graph_last l 24 43 accttcagat 1274 0.0136222168113882 Inf 9 0 16 0 cgcctgaggg 1275 0.0136222168113882 Inf 9 0 16 0 genomic chr4 150452049 + 0 unique_long l 16 36 cggggcccgc 1276 0.0136222168113882 Inf 9 0 16 0 NM_011498 refGene chr6 110362975 + 115903 graph_last 26 54 ctgtccaagg 1277 0.0136222168113882 Inf 9 0 16 0 NM_053272 refGene chr4 105446521 + 95749 graph_last l 15 34 gacctgctct 1278 0.0136222168113882 Inf 9 0 16 0 NM_183173 refGene chr11 53101835 - 19914 graph_last l 39 56 gagtatggct 1279 0.0136222168113882 Inf 9 0 16 0 gatctgaccc 1280 0.0136222168113882 Inf 9 0 16 0 gtacttggct 1281 0.0136222168113882 Inf 9 0 16 0 gtagtttaca 1282 0.0136222168113882 Inf 9 0 16 0 gtgcctcaca 1283 0.0136222168113882 Inf 9 0 16 0 tctctaaaag 1284 0.0136222168113882 Inf 9 0 16 0 AK083224 knownGene chr14 85652753 - 43463 graph_last 1 28 tgatgatgtt 1285 0.0136222168113882 Inf 9 0 16 0 NM_007936 refGene chr1 79102102 - 3765 graph_last l 16 47 tggaaagttc 1286 0.0136222168113882 Inf 9 0 16 0 tggctctagc 1287 0.0136222168113882 Inf 9 0 16 0 tgtgcactgt 1288 0.0136222168113882 Inf 9 0 16 0 NM_011123 refGene chrX 125410059 + 151562 graph_second l 76 114 tgttcttccc 1289 0.0136222168113882 Inf 9 0 16 0 ttctggtttg 1290 0.0136222168113882 Inf 9 0 16 0 ttggctgccc 1291 0.0136222168113882 0.589041095890411 43 73 79 76 tttgaaactg 1292 0.0136222168113882 Inf 9 0 16 0 aaccgtgaat 1293 0.0142732614716090 0.277777777777778 5 18 9 19 NM_025279 refGene chr13 58182021 - 35372 graph_second 1 37 atgttagtta 1294 0.0142732614716090 0.1 1 10 2 10 ccaaacgtgt 1295 0.0142732614716090 0.1 1 10 2 10 NM_008718 refGene chr7 13493111 + 119039 graph_last l 10 89 ggccagttgg 1296 0.0142732614716090 0.1 1 10 2 10 BC022600 knownGene chr7_random 10613585 - 126735 graph_last 3 27 ggtgttgctt 1297 0.0142732614716090 0.1 1 10 2 10 AK129136 knownGene chr7 110066244 - 124604 graph_last 14 41 gtaaagattg 1298 0.0142732614716090 0.1 1 10 2 10 gtcagctgag 1299 0.0142732614716090 0.1 1 10 2 10 NM_011605 refGene chr10 93515849 - 14837 graph_last l 15 68 gtgatgtaat 1300 0.0142732614716090 0.1 1 10 2 10 AK122429 knownGene chr8 80319227 + 131527 graph_last l 5 36 gtgtgatgct 1301 0.0142732614716090 0.1 1 10 2 10 tatatacata 1302 0.0142732614716090 0.1 1 10 2 10 NM_182650 refGene chr6 51936949 + 112726 graph_last l 5 29 tcacctgaaa 1303 0.0142732614716090 0.1 1 10 2 10 NM_176933 refGene chr8 34087726 + 129167 graph_last l 6 32 tctgttttta 1304 0.0142732614716090 0.1 1 10 2 10 tgcagtcatc 1305 0.0142732614716090 0.277777777777778 5 18 9 19 NM_054081 refGene chr12 108758879 + 31487 graph_last l 10 51 tggggaagaa 1306 0.0142732614716090 0.1 1 10 2 10 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 1307 0.0142732614716090 0.1 1 10 2 10 ttctcctcag 1308 0.0142732614716090 2.61538461538462 34 13 62 14 NM_008500 refGene chr2 36354993 - 73731 graph_last l 6 28 ttgtgctttg 1309 0.0142732614716090 0.1 1 10 2 10 NM_183171 refGene chr9 37655139 + 136457 graph_last b 58 291 atcgggcgca 1310 0.0144294265034525 0.379310344827586 11 29 21 30 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 1311 0.0144294265034525 0.379310344827586 11 29 21 30 aagaagactt 1312 0.0145618773453354 0.214285714285714 3 14 6 15 NM_172146 refGene chr5 77440850 + 104071 graph_last l 23 97 cacctgcttt 1313 0.0145618773453354 0.214285714285714 3 14 6 15 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 1314 0.0145618773453354 0.214285714285714 3 14 6 15 atgcgagtga 1315 0.0146813358873127 0.230769230769231 3 13 5 14 NM_016700 refGene chr14 27895234 - 40299 graph_last l 13 59 caccactggg 1316 0.0146813358873127 0.230769230769231 3 13 5 14 gtgatgcaaa 1317 0.0146813358873127 0.230769230769231 3 13 5 14 taaacagaaa 1318 0.0146813358873127 0.230769230769231 3 13 5 14 NM_011499 refGene chr6 139194420 + 117702 graph_last l 29 73 tatcaagatt 1319 0.0146813358873127 0.230769230769231 3 13 5 14 ttttattaaa 1320 0.0146813358873127 0.230769230769231 3 13 5 14 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 1321 0.0147277929249644 2.8 28 10 51 10 tggaagaaac 1322 0.0147277929249644 2.8 28 10 51 10 agcatcaata 1323 0.0153455615709619 11 11 1 21 1 ctgtgtggcc 1324 0.0153455615709619 11 11 1 21 1 NM_019867 refGene chr1 89381889 - 4414 graph_last l 45 112 gttttgagaa 1325 0.0153455615709619 11 11 1 21 1 ttccagctgc 1326 0.0156347992968249 2.04166666666667 49 24 90 25 NM_009790 refGene chr12 95768593 + 30604 graph_last l 111 171 cagcttgatg 1327 0.0159764225767671 2.88888888888889 26 9 48 9 NM_008098 refGene chr6 35451578 - 111690 graph_las