gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.per.100000 COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.per.100000 COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.count COUNT_DabMu.COUNT_DabWT_1.COUNT_DabWT_2.TAG.count NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 1 1.94078646881684e-250 0.0804455445544554 65 808 125 894 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 2 2.29523081931946e-199 0.0568965517241379 33 580 64 642 tgggttgtct 3 2.27347306291221e-192 0.0870917573872473 56 643 109 711 NM_007807 refGene chrX 7985921 - 147160 graph_last 0 12115 ataatacata 4 4.64735563705776e-180 Inf 482 0 932 0 tcggacgtac 5 3.34219697881744e-120 Inf 324 0 627 0 tggatcagtc 6 2.38052786051942e-86 0.109375 35 320 68 354 gtgaaactaa 7 1.18964668258851e-85 0.0590551181102362 15 254 29 281 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 8 1.6290389813104e-83 0.00549450549450549 1 182 1 201 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 9 3.13563822667072e-80 Inf 218 0 422 0 gtggctcaca 10 1.51111078683369e-78 2.28625954198473 1198 524 2317 580 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 11 4.02378319703407e-76 46.2 231 5 447 5 tgtagtgtaa 12 3.60913045443751e-72 0.193029490616622 72 373 139 413 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 13 8.0214427605989e-71 17.9285714285714 251 14 485 15 tgtactcaat 14 2.91108125838799e-70 0.0579710144927536 12 207 23 229 ctagtctttg 15 2.73544743585283e-67 0.198324022346369 71 358 138 396 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 16 4.19841430208088e-67 8.93939393939394 295 33 570 36 NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 17 3.51104513287977e-61 173 173 1 335 1 tgaccccggg 18 1.20949994291654e-58 0.157303370786517 42 267 82 295 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 19 6.49943188882135e-58 22 198 9 383 10 gcctaatgta 20 1.00119267148304e-51 0.194852941176471 53 272 103 301 agaaggaggt 21 5.72063802319329e-51 0.172131147540984 42 244 81 270 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 22 3.25876570326743e-48 Inf 133 0 257 0 cccttcttct 23 1.76616389020442e-46 0.109195402298851 19 174 37 192 taaagaggcc 24 2.40932088809277e-46 0.11731843575419 21 179 41 198 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 25 3.40293612727602e-46 10.2631578947368 195 19 377 21 attctccagt 26 1.06558096430564e-45 0.136842105263158 26 190 50 210 gtaagcataa 27 3.48989659610879e-45 0.153465346534653 31 202 60 223 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 28 3.48989659610879e-45 25.5 153 6 295 7 aatgacctgg 29 6.65929776236727e-44 0.0347826086956522 4 115 7 127 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 30 4.17585311950471e-43 0.072463768115942 10 138 20 153 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 31 4.72690043815749e-42 43.3333333333333 130 3 252 3 caaaacaggc 32 1.23227490680578e-41 33.25 133 4 257 4 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 33 2.68600897854667e-41 0.131736526946108 22 167 42 185 ggatttggct 34 3.85535318015018e-41 0.193548387096774 42 217 82 240 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 35 4.16284211333726e-41 26.8 134 5 260 5 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 36 4.14102831039534e-40 Inf 111 0 215 0 gtctgctgat 37 6.15241739329445e-40 0.109589041095890 16 146 30 162 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 38 8.80878436686693e-40 41.3333333333333 124 3 240 3 gtaagcaaaa 39 1.05730134136472e-38 0.120805369127517 18 149 34 165 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 40 1.15248066928893e-38 0.148809523809524 25 168 48 186 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 41 5.72255520987616e-38 7.54166666666667 181 24 350 26 cagcatcacc 42 1.25066358370452e-37 0.0303030303030303 3 99 6 109 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 43 4.42084652633425e-37 Inf 103 0 199 0 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 44 7.94385434268277e-36 0.0123456790123457 1 81 1 90 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 45 1.09550228734887e-35 0.139072847682119 21 151 41 167 gattccgtga 46 1.41901015995232e-35 0.206185567010309 40 194 77 215 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 47 1.37065956634283e-34 13.4 134 10 259 11 gtatttgcaa 48 2.53358007126948e-34 52.5 105 2 203 2 cctttaatcc 49 1.71736956160462e-33 4.58333333333333 220 48 425 53 gctgccctcc 50 4.3027926735269e-33 Inf 93 0 179 0 tttttaatgt 51 6.25299239585884e-33 0.145833333333333 21 144 41 159 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 52 9.83967748077103e-33 50 100 2 194 2 ctgaacatct 53 1.65699396270756e-32 0.108333333333333 13 120 25 133 genomic chr2 103005141 + 0 unique_long l 172 342 caggtgagcc 54 3.49474618781685e-32 Inf 90 0 174 0 aggcagacag 55 8.60747443572681e-32 0.356466876971609 113 317 218 351 aacaatttgg 56 1.38841945060216e-31 0.206896551724138 36 174 70 193 ggcttcggtc 57 2.80047091875284e-31 0.399470899470899 151 378 292 418 gaatgatctg 58 4.00395158242288e-31 0 0 68 0 75 gatgtggctg 59 4.25473686897532e-31 0.111111111111111 13 117 25 129 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 60 4.54343026752219e-31 0.0259740259740260 2 77 3 85 ttttatgttt 61 2.71161030246520e-30 0.145038167938931 19 131 37 145 gcaataaatg 62 4.55196665856001e-30 0.137096774193548 17 124 32 137 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 63 3.52224433689931e-28 4.01923076923077 209 52 404 58 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 64 1.16945255778329e-27 0.0149253731343284 1 67 2 74 tcaaacttgg 65 3.6851924828221e-27 0.179104477611940 24 134 46 148 atgtctcaaa 66 7.34739133527653e-27 0.366548042704626 103 281 199 311 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 67 8.42490362313472e-27 Inf 76 0 146 0 tgtgtgaggt 68 1.27196538795949e-26 0.0285714285714286 2 70 4 77 ctgtaggtga 69 1.91485356102847e-26 0.225806451612903 35 155 67 172 gggttggccg 70 2.58840637582678e-26 Inf 74 0 144 0 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 71 3.05354381558464e-26 0.242424242424242 40 165 77 183 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 72 4.59095690820551e-26 0.0163934426229508 1 61 1 67 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 73 4.61955416559181e-26 0.111111111111111 11 99 22 110 ctaataaagc 74 6.90124197453268e-26 0.252873563218391 44 174 86 192 gccttccaat 75 1.20667081184418e-25 0.197080291970803 27 137 52 151 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 76 1.54377593737164e-25 0 0 56 0 62 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 77 1.54377593737164e-25 0 0 56 0 62 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 78 4.04405273716153e-25 5.72 143 25 276 28 aagaggcaag 79 5.12618340494176e-25 0.11340206185567 11 97 22 107 atactgacat 80 5.78581182427745e-25 Inf 70 0 136 0 gaataataaa 81 6.2888675896006e-25 0.350806451612903 87 248 169 274 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 82 1.38423839890702e-24 7.86666666666667 118 15 228 17 NM_134022 refGene chr11 70603244 - 21213 graph_last l 82 441 tctgatggaa 83 2.76933576940275e-24 0.150943396226415 16 106 30 117 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 84 5.06762351529637e-24 Inf 68 0 131 0 cctttgtgac 85 1.57075998298451e-23 10.1 101 10 195 11 tgcccagtgc 86 1.64205836374643e-23 17.4 87 5 169 6 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 87 2.10828419670475e-23 0.103448275862069 9 87 18 96 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 88 2.67427209472220e-23 0.212121212121212 28 132 54 146 aaaaaaaaaa 89 5.23160494663785e-23 0.396363636363636 109 275 211 304 ttggtgaagg 90 6.22071488942777e-23 0.413559322033898 122 295 236 326 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 91 8.35059696255124e-23 0.0338983050847458 2 59 3 65 NM_023051 refGene chr4 147761803 + 99301 graph_last l 204 510 tcctgtcccc 92 1.54519562729573e-22 7.78571428571429 109 14 211 16 gccaagtgga 93 2.78284052806424e-22 0.237410071942446 33 139 64 154 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 94 3.60041938957369e-22 Inf 63 0 122 0 gtgacctggc 95 3.68292383168687e-22 24.6666666666667 74 3 144 3 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 96 5.46576410668623e-22 0.0350877192982456 2 57 3 63 attgtttatg 97 5.6693410422932e-22 0.101265822784810 8 79 15 87 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 98 7.10222160617804e-22 0.0192307692307692 1 52 1 57 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 99 1.09364947931427e-21 0.0821917808219178 6 73 12 81 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 100 4.60345601104735e-21 64 64 1 124 1 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 101 4.85335885159251e-21 23.6666666666667 71 3 138 3 gcccccctct 102 1.08878044787850e-20 15.8 79 5 153 6 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 103 1.19037339981883e-20 33.5 67 2 129 2 genomic chr4 137235203 - 0 unique_long l 168 283 tcacatccaa 104 1.94213249004552e-20 33 66 2 128 2 aatttcaaaa 105 2.39449271796168e-20 0.139534883720930 12 86 23 95 ggcaagcccc 106 2.3980525335448e-20 0.32 56 175 108 194 atagcagcac 107 4.23479213616152e-20 11.8571428571429 83 7 160 8 gaggctttgc 108 5.75660375776344e-20 14.8 74 5 144 5 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 109 5.98338809714845e-20 0.231404958677686 28 121 54 134 X57780 knownGene chrM 119 + 142531 graph_second l 3651 6052 caaacctcca 110 1.29753233263512e-19 Inf 56 0 108 0 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 111 1.65321516792332e-19 32 64 2 124 2 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 112 1.65321516792332e-19 32 64 2 124 2 gcccgggaat 113 1.72896491260617e-19 0.426415094339623 113 265 218 293 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 114 3.2570859460014e-19 10.375 83 8 160 9 cacacacaca 115 4.2529795834336e-19 31.5 63 2 121 2 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 116 1.04185617971571e-18 0.128205128205128 10 78 20 86 tccctgtagt 117 1.24514912145007e-18 14.2 71 5 137 5 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 118 2.17483423407983e-18 0.243697478991597 29 119 57 132 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 119 3.71984923081727e-18 16.5 66 4 128 4 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 120 3.86553002873244e-18 21 63 3 122 3 acatcataga 121 7.43018120227947e-18 0.191489361702128 18 94 35 104 NM_009192 refGene chr15 68300432 - 47664 graph_last 0 43 tatttattcc 122 7.82063137135417e-18 0 0 40 0 44 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 123 1.11069009550016e-17 20.6666666666667 62 3 120 3 tgaaataaac 124 1.58381078535506e-17 0.136986301369863 10 73 19 81 tgtgccaagt 125 1.58381078535506e-17 0.195652173913043 18 92 34 102 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 126 2.66220945568979e-17 0.0588235294117647 3 51 5 56 ccccagccag 127 3.91651874278728e-17 0.272 34 125 66 138 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 128 4.72850166506048e-17 0.111111111111111 7 63 13 70 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 129 5.3148891908889e-17 0.087719298245614 5 57 9 63 gggaagtctg 130 5.54533308919258e-17 0 0 38 0 42 cgccgccggc 131 9.17050802046851e-17 0.282258064516129 35 124 67 137 NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 132 1.06065141620697e-16 10.4285714285714 73 7 141 8 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 133 1.48977313471669e-16 0 0 37 0 41 gctttgaatg 134 2.00799114151068e-16 0.193181818181818 17 88 33 97 cgctggttcc 135 2.12456404516278e-16 0.221052631578947 21 95 40 105 gttgctgaga 136 2.30475683456301e-16 0.25 27 108 52 119 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 137 3.832223023229e-16 Inf 47 0 90 0 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 138 4.68509557399604e-16 51 51 1 98 1 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 139 6.50110197448061e-16 Inf 46 0 89 0 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 140 8.68228508235641e-16 0.177215189873418 14 79 27 87 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 141 9.49493537101254e-16 2.92857142857143 164 56 318 62 agcagtcccc 142 1.12430076661781e-15 Inf 46 0 88 0 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 143 1.25861301748859e-15 0.090909090909091 5 55 10 61 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 144 1.25861301748859e-15 0.247524752475248 25 101 48 112 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 145 1.37906332239631e-15 0.0263157894736842 1 38 1 42 NM_009692 refGene chr9 47988814 + 137297 graph_last 0 1015 gctttcttac 146 1.97975760177615e-15 Inf 44 0 86 0 aggaaggcgg 147 2.11909703573085e-15 0.257142857142857 27 105 52 116 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 148 2.20163133538118e-15 0.107142857142857 6 56 11 62 cctttgagat 149 2.87512049437585e-15 0.0925925925925926 5 54 10 60 NM_008740 refGene chr11 103486744 - 24251 graph_last l 109 193 ctaacagctg 150 3.67880234369385e-15 48 48 1 93 1 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 151 5.39510784182719e-15 Inf 43 0 84 0 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 152 7.44110646887352e-15 0 0 33 0 37 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 153 1.05057829366383e-14 0.048780487804878 2 41 3 45 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 154 1.33756612303853e-14 5.66666666666667 85 15 164 17 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 155 1.39007448098427e-14 17.6666666666667 53 3 103 3 agagtaatca 156 1.89761535951186e-14 0.109090909090909 6 55 12 61 gcacaacttg 157 1.89761535951186e-14 0.377358490566038 60 159 116 176 accaatgaac 158 2.79177366601444e-14 Inf 41 0 80 0 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 159 2.79177366601444e-14 Inf 41 0 80 0 gtaaaaaaaa 160 3.17209257174919e-14 0.223529411764706 19 85 37 94 aaggtggaag 161 6.85172398579915e-14 0.207792207792208 16 77 30 85 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 162 6.85172398579915e-14 0.0869565217391304 4 46 7 51 NM_016852 refGene chr11 115584466 - 25162 graph_last l 127 187 tctgtcccgc 163 9.05144748475563e-14 44 44 1 86 1 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 164 1.17030527775294e-13 8.125 65 8 126 9 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 165 1.42330793592239e-13 0 0 31 0 34 aggtcgggtg 166 1.57861582511876e-13 0.272727272727273 27 99 52 109 ggatggggag 167 1.57861582511876e-13 0.238095238095238 20 84 38 93 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 168 1.64961708514513e-13 11 55 5 107 5 NM_009790 refGene chr12 95767982 + 30604 graph_last l 461 1256 acaaacttag 169 1.64961708514513e-13 3.09302325581395 133 43 258 48 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 170 1.71341813360358e-13 2.46666666666667 185 75 357 83 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 171 1.76845740282032e-13 16.6666666666667 50 3 97 3 tgtataaaaa 172 2.56871154006214e-13 0.275510204081633 27 98 52 108 NM_174998 refGene chr4 122151861 + 96906 graph_last l 199 320 ctgcttctaa 173 4.47025653028757e-13 16.3333333333333 49 3 94 3 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 174 4.75943291308638e-13 4.57894736842105 87 19 168 21 gaaaaaaaaa 175 5.88579740436671e-13 0.179104477611940 12 67 24 74 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 176 6.53550585043294e-13 Inf 38 0 73 0 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 177 9.3289577568665e-13 0.197183098591549 14 71 28 78 gtcaaaaaaa 178 1.14430106216273e-12 0.0526315789473684 2 38 4 42 ggaagccact 179 1.30825332425616e-12 0.391891891891892 58 148 112 164 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 180 1.67029824804848e-12 7.11111111111111 64 9 123 10 NM_007687 refGene chr19 5351164 + 67562 graph_last 686 2388 gaagcaggac 181 2.33462006353328e-12 0.493449781659389 113 229 218 253 cacaaacggt 182 2.66088514483243e-12 0.379562043795620 52 137 100 151 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 183 2.79676684836974e-12 0.0540540540540541 2 37 4 41 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 184 4.35320461770128e-12 0.2 13 65 25 72 aaataaagat 185 7.81837341312448e-12 12 48 4 93 4 tgactgggag 186 8.54928695661351e-12 8.14285714285714 57 7 111 8 tgtgttgtgt 187 1.04204402316690e-11 0.323809523809524 34 105 66 116 tattggctct 188 1.33951002536468e-11 2.95121951219512 121 41 234 45 NM_011221 refGene chr11 6368235 - 17495 graph_last l 75 170 gtttctcagg 189 1.64163353536503e-11 Inf 34 0 66 0 atgtagtagt 190 1.68558426536575e-11 0.130434782608696 6 46 11 51 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 191 1.68558426536575e-11 0.0571428571428571 2 35 4 39 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 192 1.75498531888576e-11 20.5 41 2 79 2 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 193 1.90154255065452e-11 11.75 47 4 90 4 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 194 1.9097410372084e-11 7.25 58 8 113 9 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 195 1.94406567057073e-11 0.0344827586206897 1 29 1 32 aagaaaatag 196 2.96235813261535e-11 0.19672131147541 12 61 24 68 NM_013626 refGene chr1 99762346 + 4989 graph_second 0 80 cattggatac 197 3.14289894433547e-11 0.032258064516129 1 31 2 34 NM_133833 refGene chr1 34872781 + 1393 graph_last 0 231 aataaagttg 198 3.22656568388777e-11 0.153846153846154 8 52 16 58 NM_029761 refGene chr2_random 1107769 - 82579 graph_last 11 66 gacaataaaa 199 4.02867256822126e-11 0.0588235294117647 2 34 4 38 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 200 4.58414591412576e-11 7.125 57 8 110 9 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 201 5.05480646020407e-11 Inf 33 0 64 0 gcagggtggg 202 6.02070308487487e-11 0.102564102564103 4 39 7 43 NM_019675 refGene chr14 58090309 + 42274 graph_last l 25 323 accaatgaaa 203 7.8352588247882e-11 0.235294117647059 16 68 31 75 agagcgaagt 204 8.00900296498148e-11 0.290697674418605 25 86 49 95 NM_144513 refGene chr12 105142749 + 31142 graph_last l 151 372 gtgctttcaa 205 1.09397469244853e-10 0.278481012658228 22 79 42 87 taatatttaa 206 1.30410778486126e-10 35 35 1 68 1 aggatctcag 207 1.34702877981115e-10 Inf 32 0 61 0 tagatatagg 208 1.39011637893615e-10 2.12087912087912 193 91 373 101 NM_025628 refGene chr7 24582313 - 119954 graph_last 226 1081 atgcaactac 209 1.60072695015004e-10 0.368421052631579 42 114 82 126 aagaaaccag 210 1.89666576462094e-10 0.152173913043478 7 46 13 51 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 211 2.31520279869232e-10 Inf 31 0 60 0 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 212 3.36494488708449e-10 0.0384615384615385 1 26 1 29 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 213 3.36494488708449e-10 0.0384615384615385 1 26 1 29 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 214 3.52535817982576e-10 34 34 1 66 1 tgtaaaataa 215 3.57673718625178e-10 18.5 37 2 72 2 NM_172882 refGene chr5 101135739 - 105200 graph_last 0 4542 atgactgata 216 4.05513490599651e-10 Inf 31 0 59 0 cccccagcag 217 4.05513490599651e-10 Inf 31 0 59 0 BC019782 knownGene chr13 94915427 - 37110 graph_last l 5 53 ttttgtacaa 218 4.95736838477315e-10 0.0357142857142857 1 28 2 31 tgaaaaaaaa 219 5.28348970367033e-10 0.238095238095238 15 63 29 70 NM_133195 refGene chr18 26103935 - 63468 graph_last l 96 185 aagagaacac 220 5.93917939273113e-10 34 34 1 65 1 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 221 7.38580008658244e-10 Inf 30 0 58 0 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 222 9.46969789858594e-10 0 0 23 0 25 ttatcaagtg 223 1.03063977073515e-09 18 36 2 69 2 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 224 1.03590321972244e-09 33 33 1 64 1 NM_144513 refGene chr12 105130773 + 31142 graph_last l 111 152 caaagagaac 225 1.12605261156794e-09 Inf 29 0 56 0 gaggagaaga 226 1.21647376536279e-09 0.3125 25 80 48 89 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 227 1.25158996343022e-09 0.125 5 40 10 44 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 228 1.26860693521018e-09 0.287671232876712 21 73 40 81 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 229 1.56607259812731e-09 0.18 9 50 18 55 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 230 1.83875064320499e-09 33 33 1 63 1 gcttttgtta 231 2.53146051550344e-09 9 45 5 87 6 tgacaatttt 232 2.74267302559205e-09 0.09375 3 32 5 35 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 233 3.00749739587608e-09 0.183673469387755 9 49 18 54 NM_010310 refGene chr2 174705071 + 81983 graph_last 498 1272 atcaacaccg 234 3.03791138272024e-09 3.10344827586207 90 29 175 32 gtgttaacca 235 3.34912912355242e-09 0.159090909090909 7 44 14 49 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 236 3.34912912355242e-09 0.159090909090909 7 44 14 49 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 237 3.34932079720555e-09 0.0714285714285714 2 28 3 31 ggaaaggcaa 238 3.95924303155206e-09 9.75 39 4 76 4 atactgaagc 239 4.52312412334734e-09 0.265625 17 64 33 71 NM_029186 refGene chr19 46557251 + 70202 graph_last 0 457 ggccgctgct 240 4.62476987097472e-09 0.211538461538462 11 52 21 57 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 241 4.94302654526694e-09 0.090909090909091 3 33 6 36 NM_019632 refGene chr2 149091252 - 80110 graph_last l 79 133 aacacttgta 242 5.71451192259494e-09 Inf 27 0 52 0 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 243 5.71451192259494e-09 Inf 27 0 52 0 NM_177407 refGene chr18 61115520 + 65252 graph_second l 54 149 ctccgtccaa 244 5.71451192259494e-09 Inf 27 0 53 0 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 245 5.71451192259494e-09 12 36 3 70 3 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 246 5.71451192259494e-09 Inf 27 0 53 0 NM_033264 refGene chr9 114792119 - 141710 graph_last l 116 153 ttacttgatc 247 5.71451192259494e-09 Inf 27 0 52 0 NM_144879 refGene chr1 194682531 + 9611 graph_last 2 25 gaactgtaat 248 6.35359126016014e-09 0 0 21 0 23 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 249 6.35359126016014e-09 0 0 21 0 23 tgaggatgaa 250 6.35359126016014e-09 0 0 21 0 23 cctttatttc 251 7.68795076173286e-09 31 31 1 59 1 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 252 7.9083106110405e-09 0.0740740740740741 2 27 3 30 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 253 1.02544589744076e-08 8 40 5 78 5 taaatcaact 254 1.10797600156212e-08 0.09375 3 32 6 35 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 255 1.19587072502807e-08 16.5 33 2 63 2 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 256 1.38887495382572e-08 0.0434782608695652 1 23 1 25 cctccctttt 257 1.43384586254677e-08 0.1 3 30 5 33 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 258 1.53179621086600e-08 Inf 26 0 50 0 NM_053078 refGene chr18 33627012 + 63718 graph_last l 3 36 catcattggt 259 1.67910745420607e-08 0 0 20 0 22 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 260 1.67910745420607e-08 0 0 20 0 22 caccaccgtt 261 1.90190507185499e-08 0.294117647058824 20 68 39 75 tctacaagaa 262 2.23994577333029e-08 0.352941176470588 30 85 58 94 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 263 2.61543009113127e-08 Inf 25 0 49 0 taaaaagaaa 264 2.81878576932292e-08 9.25 37 4 72 4 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 265 3.2826719912038e-08 4.38461538461539 57 13 110 14 ctgcatcgtt 266 3.30294037892696e-08 0.103448275862069 3 29 5 32 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 267 3.30294037892696e-08 0.103448275862069 3 29 5 32 tcccccacac 268 3.37706703071140e-08 7.16666666666667 43 6 84 7 NM_010838 refGene chr11 103995793 + 24313 graph_last l 32 165 atttctttgg 269 3.71949692215415e-08 0.138888888888889 5 36 10 40 gctccctctg 270 3.71949692215415e-08 0.138888888888889 5 36 10 40 aacaggttca 271 3.79454115932439e-08 0.384615384615385 35 91 67 101 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 272 3.99890393968017e-08 0.324324324324324 24 74 47 82 acgctgaata 273 4.36350942214393e-08 0 0 19 0 21 gcacaggaga 274 4.36350942214393e-08 0 0 19 0 21 ttatcactgt 275 4.36350942214393e-08 0 0 19 0 21 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 276 4.42661338705403e-08 0.0416666666666667 1 24 2 26 genomic chr10 130504840 - 0 unique_long l 55 103 gtggcaggcg 277 4.43995991769508e-08 Inf 25 0 48 0 gctttgactg 278 4.47908491899434e-08 0.08 2 25 3 28 tggcccaaat 279 4.6898578852926e-08 0.224489795918367 11 49 21 54 gaaaatgaga 280 4.78937773838551e-08 0.157894736842105 6 38 12 42 NM_013556 refGene chrX_random 10203554 + 153014 graph_last l 168 266 tttcagcagt 281 6.23050829247431e-08 11 33 3 64 3 ccagaacaga 282 7.96650886742565e-08 0.544502617801047 104 191 201 211 genomic chr7 114718440 + 0 unique_long l 65 101 gctatttgcc 283 7.96650886742565e-08 Inf 24 0 47 0 NM_013509 refGene chr6 126683937 - 116901 graph_last l 77 103 tcccacagtt 284 7.96650886742565e-08 Inf 24 0 47 0 NM_177639 refGene chr17 71233584 + 60910 graph_last l 51 90 cattactgca 285 8.62515245024624e-08 15 30 2 58 2 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 286 8.62515245024624e-08 0.0476190476190476 1 21 1 23 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 287 8.62515245024624e-08 0.0476190476190476 1 21 1 23 gtgagcttgt 288 8.62515245024624e-08 0.0476190476190476 1 21 1 23 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 289 8.69310803696605e-08 0.129032258064516 4 31 7 34 NM_182807 refGene chr10 126835352 + 16544 graph_last l 10 75 cgtatcaata 290 9.18111378755204e-08 0.0769230769230769 2 26 4 29 gaagtcggaa 291 9.18111378755204e-08 0.0769230769230769 2 26 4 29 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 292 9.19571784782958e-08 8 40 5 77 6 gtttagtgga 293 9.73048900007654e-08 0.162162162162162 6 37 12 41 tgggactcac 294 1.00753040786554e-07 6.14285714285714 43 7 84 8 gagacagtga 295 1.05521720150221e-07 0.0434782608695652 1 23 2 25 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 296 1.05521720150221e-07 0.0434782608695652 1 23 2 25 CF929608 all_est chr12 51042570 + 28064 graph_last 3 55 aattcaatta 297 1.10687815133096e-07 0 0 18 0 20 NM_010771 refGene chr18 35750143 + 63875 graph_second l 11 76 tttggatgtt 298 1.10687815133096e-07 0 0 18 0 20 NM_008229 refGene chr10 38126090 + 11616 graph_last l 16 92 ctttatgtga 299 1.21107296543367e-07 0.103448275862069 3 29 6 32 acagtgcctg 300 1.26823258609325e-07 0.125 4 32 8 35 NM_022656 refGene chr14 25710087 - 40123 graph_last l 90 323 ggtccaagag 301 1.30966188045383e-07 0.190476190476190 8 42 16 46 atggctcaca 302 1.41573110113536e-07 7.8 39 5 75 6 NM_026859 refGene chr15 77986662 + 48143 graph_last l 54 191 cactgagtgt 303 1.49926117026058e-07 0.184210526315789 7 38 13 42 gtgtatcttt 304 1.49935253553993e-07 0.195121951219512 8 41 15 45 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 305 1.55114096071985e-07 7.4 37 5 71 5 NM_182650 refGene chr6 51936886 - 112726 graph_last l 134 450 gtgtaataag 306 1.60297958569188e-07 0.317460317460317 20 63 38 70 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 307 1.60297958569188e-07 2.46341463414634 101 41 196 45 ggatatgtgg 308 1.68289522491186e-07 27 27 1 52 1 atcctggtaa 309 1.83822986016099e-07 3.28571428571429 69 21 133 23 gggtttttat 310 1.86737016718859e-07 0.244897959183673 12 49 23 54 tacatacata 311 1.99243468280128e-07 Inf 23 0 44 0 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 312 2.27654894282481e-07 4.07692307692308 53 13 103 14 aataaactgc 313 2.38387951010643e-07 0.234042553191489 11 47 22 52 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 314 2.42884111285535e-07 0.195121951219512 8 41 16 45 ctcaataaat 315 2.43853870916978e-07 0.0833333333333333 2 24 3 26 tctaagtacg 316 2.48458229255545e-07 26 26 1 50 1 ccctcaccca 317 2.51209083363197e-07 0.0454545454545455 1 22 2 24 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 318 2.55356809052808e-07 10.6666666666667 32 3 61 3 tcctgggatg 319 2.55356809052808e-07 10.6666666666667 32 3 61 3 gattctccga 320 2.83329616698344e-07 0 0 17 0 19 gaaaatatcc 321 3.21822143552348e-07 0.176470588235294 6 34 11 38 tcttaatgaa 322 3.3377770339265e-07 0.413043478260870 38 92 73 102 NM_009142 refGene chr8 96065511 + 132522 graph_last l 78 152 ctccacagaa 323 3.37371820285146e-07 Inf 22 0 43 0 gctaaccacc 324 3.50301766504986e-07 14 28 2 55 2 NM_009441 refGene chr16 96203958 + 56249 graph_last l 67 224 ttttgagtga 325 3.50301766504986e-07 14 28 2 55 2 agggaaaaaa 326 3.60780933410534e-07 0.115384615384615 3 26 5 29 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 327 3.60780933410534e-07 0.115384615384615 3 26 5 29 cctcctccag 328 3.87766329913821e-07 3.6875 59 16 115 18 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 329 4.08117070088842e-07 25 25 1 49 1 ttcagctcga 330 4.37810063577916e-07 0.244444444444444 11 45 21 50 gatgcgcttg 331 5.20844616107064e-07 0.0526315789473684 1 19 1 21 NM_026629 refGene chr6 55168250 + 112941 graph_last l 20 135 agagcaagga 332 5.85500109831996e-07 0.111111111111111 3 27 6 30 genomic chrM 16041 - 0 unique_long l 56 153 aataattagc 333 5.87958743336042e-07 Inf 22 0 42 0 NM_009441 refGene chr16 96222366 + 56249 graph_last l 65 151 tgagaactgc 334 5.87958743336042e-07 13.5 27 2 53 2 NM_025994 refGene chr4 140737608 - 98638 graph_last 75 162 tgcttgctca 335 5.87958743336042e-07 13.5 27 2 53 2 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 336 6.02450858357421e-07 0.0476190476190476 1 21 2 23 gcagttgtcc 337 6.87374665021711e-07 4.16666666666667 50 12 96 13 tgtaatacaa 338 6.95357832421459e-07 25 25 1 48 1 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 339 7.32940349053227e-07 0 0 16 0 18 tccggcttgt 340 7.32940349053227e-07 0 0 16 0 18 NM_022417 refGene chr1 87790773 + 4273 graph_last l 184 778 gtagtggagc 341 7.64276569480787e-07 3.78571428571429 53 14 103 15 gtgaaattat 342 8.60234610640001e-07 7.4 37 5 71 6 tagggcaatc 343 8.62752581743685e-07 0.333333333333333 21 63 41 70 gcagctcaca 344 9.28200936622492e-07 13.5 27 2 52 2 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 345 9.36047442535351e-07 6.8 34 5 66 5 BC049262 knownGene chr10 101636709 + 15243 graph_last l 47 130 tgatggaagg 346 9.62620481496395e-07 Inf 21 0 40 0 ctgcagcacc 347 1.04647386881906e-06 Inf 21 0 41 0 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 348 1.04647386881906e-06 Inf 21 0 41 0 tccctccctt 349 1.04647386881906e-06 Inf 21 0 41 0 tttgtgtctg 350 1.04647386881906e-06 Inf 21 0 41 0 taaaaaaaaa 351 1.09562898201641e-06 0.404761904761905 34 84 66 93 ttaatattta 352 1.14026578732774e-06 4.77777777777778 43 9 84 10 ttcattataa 353 1.14236849023757e-06 0.420454545454545 37 88 71 97 NM_144859 refGene chr17 64375162 - 60598 graph_last l 61 136 ctttctcact 354 1.19058114742549e-06 24 24 1 47 1 agaaataaat 355 1.25914573323345e-06 0.115384615384615 3 26 6 29 NM_013457 refGene chr5 33179806 + 101907 graph_last l 7 78 aaatatcgtt 356 1.26502248222385e-06 0.0555555555555556 1 18 1 20 NM_053246 refGene chr8 96147260 - 132535 graph_last l 3 31 aaggagatta 357 1.26502248222385e-06 0.0555555555555556 1 18 1 20 genomic chr7 27865050 - 0 unique_long l 3 24 gtgactgaag 358 1.26502248222385e-06 0.0555555555555556 1 18 1 20 gactgtgcca 359 1.27409185822793e-06 4.5 45 10 87 11 ccatttgagc 360 1.28637579535315e-06 0.090909090909091 2 22 3 24 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 361 1.28637579535315e-06 0.090909090909091 2 22 3 24 gtcagttaaa 362 1.28637579535315e-06 0.090909090909091 2 22 3 24 NM_010014 refGene chr4 103604536 + 95607 graph_last l 10 76 taaaacggtt 363 1.28637579535315e-06 0.090909090909091 2 22 3 24 gctgggcggg 364 1.44882002045322e-06 13 26 2 51 2 NM_016783 refGene chrX 27932232 - 147872 graph_last l 3 92 tagtgttttc 365 1.53722103589261e-06 Inf 20 0 39 0 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 366 1.53722103589261e-06 Inf 20 0 39 0 tctcccccac 367 1.53722103589261e-06 Inf 20 0 39 0 NM_021604 refGene chr4 154278673 - 99853 graph_last l 40 149 aaataaagtc 368 1.55408852155812e-06 0.210526315789474 8 38 16 42 ctattaaaag 369 1.55624763439405e-06 7.75 31 4 60 4 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 370 1.55624763439405e-06 7.75 31 4 60 4 ttccagcctt 371 1.69179707581313e-06 2.51428571428571 88 35 170 39 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 372 1.74635266375788e-06 0.125 3 24 5 27 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 373 1.83644282024471e-06 0 0 15 0 17 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 374 2.06871679101024e-06 0.181818181818182 6 33 11 36 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 375 2.38895324535113e-06 0.0869565217391304 2 23 4 25 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 376 2.41554480761645e-06 3.41176470588235 58 17 112 19 X57780 knownGene chrM 2069 + 142531 graph_last l 436 2194 aacggctaaa 377 2.57249911172316e-06 Inf 20 0 38 0 NM_145545 refGene chr3 146522536 + 90000 graph_second 0 2495 agcaattcaa 378 2.57249911172316e-06 Inf 20 0 38 0 gctgtgggtc 379 2.57249911172316e-06 Inf 20 0 38 0 NM_008131 refGene chr1 157363262 + 7351 graph_last l 47 91 tccggtaggc 380 2.57249911172316e-06 Inf 20 0 38 0 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 381 2.58433510851623e-06 9.33333333333333 28 3 54 3 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 382 2.66920557172920e-06 0.12 3 25 6 28 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 383 2.66920557172920e-06 0.12 3 25 6 28 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 384 2.69521138011733e-06 9.33333333333333 28 3 55 3 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 385 2.89920136103133e-06 23 23 1 44 1 NM_011393 refGene chr2 103004726 + 77399 graph_last l 39 79 attgtttgca 386 2.89920136103133e-06 23 23 1 44 1 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 387 2.94886991020505e-06 0.0952380952380952 2 21 3 23 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 388 2.94886991020505e-06 0.0952380952380952 2 21 3 23 NM_008632 refGene chr1 68044382 - 3222 graph_last 0 44 attggcattt 389 3.05168887546731e-06 0.0588235294117647 1 17 1 19 NM_010487 refGene chr9 22636685 - 135759 graph_last l 76 222 ccagaaaata 390 3.12276509944897e-06 0.255813953488372 11 43 22 48 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 391 3.65619584595858e-06 0.172413793103448 5 29 9 32 atttgattag 392 3.70103237909517e-06 0.1875 6 32 11 35 gagtctccct 393 3.80095618436271e-06 0.153846153846154 4 26 7 29 NM_009457 refGene chrX 19235820 + 147564 graph_last l 47 288 tagccaagcc 394 3.86001711315139e-06 0.236842105263158 9 38 17 42 NM_009750 refGene chrX 124844890 + 151536 graph_last l 173 452 gaaagcaatg 395 3.9452125085076e-06 0.360655737704918 22 61 42 68 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 396 4.01865297193467e-06 9 27 3 53 3 NM_011035 refGene chr7 90025637 + 123245 graph_last l 246 410 ctcagaggtc 397 4.06375205646018e-06 4.3 43 10 84 11 ggagagggta 398 4.21701057586921e-06 0.166666666666667 5 30 10 33 gggtcaaagg 399 4.21701057586921e-06 0.166666666666667 5 30 10 33 NM_011861 refGene chr17 27340445 + 58149 graph_last l 49 144 aactggccgc 400 4.31367842423628e-06 Inf 19 0 37 0 NM_011100 refGene chr3 150651068 - 90234 graph_last l 38 103 cctaaaattc 401 4.31367842423628e-06 Inf 19 0 37 0 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 402 4.31367842423628e-06 Inf 19 0 37 0 NM_146125 refGene chr2 120021247 + 78437 graph_last l 55 96 gtcctgcagg 403 4.31367842423628e-06 Inf 19 0 37 0 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 404 4.62609825801699e-06 0 0 14 0 16 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 405 4.62609825801699e-06 0 0 14 0 16 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 406 4.62609825801699e-06 0 0 14 0 16 NM_010207 refGene chr7_random 27126424 - 127060 graph_last 0 21 ttcataaaaa 407 4.62609825801699e-06 0 0 14 0 16 attttgtata 408 4.734002918753e-06 22 22 1 43 1 NM_153791 refGene chr17 23346778 - 57732 graph_last l 66 283 gtgatgcgga 409 4.734002918753e-06 22 22 1 43 1 catacctgaa 410 5.1345115201041e-06 0.228571428571429 8 35 15 39 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 411 5.18382094934057e-06 0.090909090909091 2 22 4 24 tcaataaagc 412 5.53763870341156e-06 0.288888888888889 13 45 25 50 tgtgtcaacc 413 5.73963774931007e-06 2.58620689655172 75 29 145 32 tgtaagtctg 414 6.60447185583236e-06 0.148148148148148 4 27 8 30 NM_011181 refGene chr4_random 167174 - 99874 graph_last 23 135 ttggtaatct 415 6.60447185583236e-06 0.1875 6 32 12 35 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 416 6.70845426660331e-06 0.1 2 20 3 22 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 417 7.38545566914883e-06 Inf 18 0 35 0 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 418 7.38545566914883e-06 Inf 18 0 35 0 tgtatacaca 419 7.38545566914883e-06 Inf 18 0 35 0 NM_029879 refGene chr13 103551767 - 37712 graph_last l 48 91 caaatggact 420 7.49546399237348e-06 Inf 19 0 36 0 NM_008447 refGene chr10 130505931 - 16675 graph_last l 32 56 ctgcaaaacc 421 7.49546399237348e-06 Inf 19 0 36 0 ctgcagcggc 422 7.49546399237348e-06 Inf 19 0 36 0 NM_080555 refGene chr4 104090744 + 95672 graph_last 45 145 gtgtagatgc 423 7.49546399237348e-06 Inf 19 0 36 0 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 424 7.49546399237348e-06 Inf 19 0 36 0 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 425 7.66753440569608e-06 0.0555555555555556 1 18 2 20 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 426 7.8712029623935e-06 2.95238095238095 62 21 119 23 NM_022029 refGene chr9 38324027 + 136533 graph_last l 92 152 ctgggcgcgt 427 8.0294994909187e-06 22 22 1 42 1 NM_026959 refGene chr5 36556737 - 102112 graph_last l 19 123 ggccgtgtgc 428 8.18196848100926e-06 0.130434782608696 3 23 5 25 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 429 8.19846638905135e-06 6.2 31 5 60 5 gggaaggcgg 430 8.19846638905135e-06 0.461538461538462 42 91 81 101 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 431 8.21173253833332e-06 5.83333333333333 35 6 67 7 tgggtgtccc 432 8.6577216957003e-06 5.83333333333333 35 6 68 7 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 433 9.25404003808827e-06 7 28 4 55 4 tgatatgagc 434 9.27027967075917e-06 3.23529411764706 55 17 106 19 gactatatat 435 9.50449871957134e-06 0.212121212121212 7 33 14 37 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 436 1.00443778442424e-05 8.66666666666667 26 3 51 3 atagaggcaa 437 1.02221511291363e-05 0.236842105263158 9 38 18 42 BY534359 all_est chrX 84532804 + 150025 graph_last 0 72 tgagagaaaa 438 1.15048078064847e-05 0.0952380952380952 2 21 4 23 aagatgatat 439 1.15996821098119e-05 Inf 18 0 34 0 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 440 1.15996821098119e-05 Inf 18 0 34 0 NM_177379 refGene chr9 32958080 + 136212 graph_last l 33 60 cagaatgagc 441 1.15996821098119e-05 Inf 18 0 34 0 NM_009872 refGene chr1 76438520 + 3664 graph_last l 52 134 ctgggagttg 442 1.15996821098119e-05 Inf 18 0 34 0 NM_021560 refGene chr3 17968391 + 83311 graph_last l 12 54 gcgatctgcc 443 1.15996821098119e-05 0 0 14 0 15 NM_053078 refGene chr18 33627973 + 63718 graph_last 0 18 ggtaaaatat 444 1.15996821098119e-05 0 0 14 0 15 NM_029530 refGene chr2 136212325 + 79508 graph_last l 58 171 tgagttcgct 445 1.15996821098119e-05 Inf 18 0 34 0 NM_178795 refGene chr2 121579213 + 78592 graph_last l 63 153 tgtgactccc 446 1.15996821098119e-05 Inf 18 0 34 0 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 447 1.15996821098119e-05 Inf 18 0 34 0 atgtcatcaa 448 1.17518729611845e-05 4.44444444444444 40 9 77 10 ctctcttcta 449 1.18953242257161e-05 0.2 6 30 11 33 taagggaaat 450 1.18953242257161e-05 2.21951219512195 91 41 176 45 tttttggtgt 451 1.18953242257161e-05 0.2 6 30 11 33 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 452 1.21179421838112e-05 0.193548387096774 6 31 12 34 NM_023850 refGene chr2 93230019 + 76987 graph_last l 75 134 ctggtacgtt 453 1.22122391371376e-05 21 21 1 40 1 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 454 1.22122391371376e-05 21 21 1 40 1 NM_011889 refGene chr15 83851285 + 48775 graph_last l 216 593 tagatgttgc 455 1.24922978689881e-05 0.479166666666667 46 96 88 106 cgtctgtgga 456 1.27931085394925e-05 2.5 75 30 145 33 ctgtcatttg 457 1.35935163376343e-05 0.172413793103448 5 29 10 32 NM_011026 refGene chr5 121995655 + 106813 graph_last 67 209 ctatcttgtc 458 1.43938272889905e-05 0.263157894736842 10 38 19 42 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 459 1.47573227974925e-05 0.105263157894737 2 19 3 21 NM_009548 refGene chr11 61020026 - 20524 graph_last l 112 164 ccaaagaacc 460 1.48649981298643e-05 11.5 23 2 45 2 gccttggtga 461 1.48649981298643e-05 11.5 23 2 45 2 taatgtagac 462 1.6158749245327e-05 8.66666666666667 26 3 50 3 NM_009871 refGene chr11 80051754 + 22184 graph_last l 45 226 ctgctatgaa 463 1.70170512638425e-05 0.212121212121212 7 33 14 36 atggcttaat 464 1.73008056768142e-05 0.136363636363636 3 22 5 24 NM_133699 refGene chr12 17676661 + 26516 graph_last l 29 105 cggccactgg 465 1.73008056768142e-05 0.0666666666666667 1 15 1 17 gggggtgagg 466 1.73008056768142e-05 0.0666666666666667 1 15 1 17 ggggtacctg 467 1.73008056768142e-05 0.0666666666666667 1 15 1 17 NM_016787 refGene chr9 72480244 + 139083 graph_last l 27 89 tggttacgta 468 1.73008056768142e-05 0.136363636363636 3 22 5 24 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 469 1.74682216496520e-05 4.33333333333333 39 9 76 10 NM_027629 refGene chr7 92441942 + 123455 graph_last l 36 59 caccgtaatg 470 1.87122118435982e-05 Inf 17 0 33 0 gaggagtggg 471 1.87122118435982e-05 Inf 17 0 33 0 NM_133726 refGene chr15 82825573 + 48651 graph_second l 46 85 gccaagtaag 472 1.87122118435982e-05 Inf 17 0 33 0 ttataccagc 473 1.87122118435982e-05 Inf 17 0 33 0 ttttctatgc 474 1.87122118435982e-05 Inf 17 0 33 0 NM_025641 refGene chr4 114978432 - 96347 graph_last l 243 524 cacgggacca 475 1.94495849736204e-05 3.66666666666667 44 12 85 13 NM_199022 refGene chr2 125928783 + 78833 graph_last l 38 101 cattgtggaa 476 1.95222613145606e-05 20 20 1 39 1 gaagatgagc 477 2.09847495356772e-05 5 35 7 68 8 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 478 2.15352093164304e-05 0.302325581395349 13 43 25 48 tagttccgac 479 2.28115476320544e-05 0.2 6 30 12 33 NM_011885 refGene chr7 22543696 - 119747 graph_last l 49 216 tgctgggatg 480 2.28115476320544e-05 0.2 6 30 12 33 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 481 2.40212275579142e-05 8.33333333333333 25 3 48 3 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 482 2.45333845387284e-05 0.1 2 20 4 22 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 483 2.45333845387284e-05 0.1 2 20 4 22 ggaagatgct 484 2.58406094519469e-05 0.368421052631579 21 57 41 63 aaaataaagg 485 2.66953636591910e-05 0.242424242424242 8 33 15 37 ctgctggtgg 486 2.90461191063311e-05 5.8 29 5 56 5 aataaaatta 487 2.92083618558181e-05 0 0 13 0 14 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 488 3.16555918642283e-05 Inf 17 0 32 0 NM_175692 refGene chr2 159010496 + 80939 graph_last l 52 68 ctactgaact 489 3.16555918642283e-05 Inf 17 0 32 0 tctctgaccc 490 3.16555918642283e-05 Inf 17 0 32 0 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 491 3.16555918642283e-05 Inf 17 0 32 0 NM_013826 refGene chr13 113678400 + 38296 graph_last 8 73 atttaaacag 492 3.73664818790927e-05 0.142857142857143 3 21 5 23 NM_023048 refGene chr6 5155867 - 110069 graph_last 0 84 gttaaaaaaa 493 3.73664818790927e-05 0.142857142857143 3 21 5 23 caaggtgaca 494 3.75683956767175e-05 0.470588235294118 40 85 77 94 tacattttca 495 3.97209669073169e-05 0.275 11 40 22 44 genomic chr10 64909820 + 0 unique_long l 8 46 gtgccaagga 496 4.08099840188763e-05 0.0625 1 16 2 18 NM_146083 refGene chr17 80905882 - 61430 graph_last l 4 44 tagctaagga 497 4.08099840188763e-05 0.0625 1 16 2 18 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 498 4.08099840188763e-05 11 22 2 43 2 NM_019710 refGene chrX 139759704 + 152140 graph_last l 15 68 ttagattgtt 499 4.08099840188763e-05 0.0625 1 16 2 18 NM_025403 refGene chr2 112487671 + 77936 graph_last l 28 176 ccaggttatt 500 4.1332144174105e-05 0.214285714285714 6 28 11 31 NM_018745 refGene chr15 39066010 - 46428 graph_last l 8 56 aaatagacgt 501 4.20265810383695e-05 0.0714285714285714 1 14 1 16 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 502 4.22136520551957e-05 3.58333333333333 43 12 83 13 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 503 4.30575903849214e-05 0.185185185185185 5 27 10 30 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 504 4.49065745893301e-05 0.166666666666667 4 24 7 26 NM_145382 refGene chr13 55316743 - 35167 graph_last l 31 120 gggagagata 505 4.49065745893301e-05 0.166666666666667 4 24 7 26 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 506 4.51818059254001e-05 5.6 28 5 55 5 taagtggaat 507 4.60474523332382e-05 0.385964912280702 22 57 42 63 NM_033561 refGene chr5 133448365 - 107623 graph_last l 83 309 cattgcgtgg 508 4.88109995288522e-05 0.289473684210526 11 38 21 42 atactaacgt 509 5.14416419985555e-05 0.136363636363636 3 22 6 24 tcctcacggg 510 5.14416419985555e-05 0.136363636363636 3 22 6 24 NM_011751 refGene chr11 79967361 + 22170 graph_last l 17 104 tgacttttct 511 5.14416419985555e-05 0.136363636363636 3 22 6 24 cccacaaggt 512 5.23047728293854e-05 0.354166666666667 17 48 32 53 attatatttt 513 5.30988122599174e-05 6.5 26 4 50 4 NM_016744 refGene chr2 80196841 - 76137 graph_last l 49 73 acaacctatg 514 5.35845786226376e-05 Inf 16 0 31 0 NM_178631 refGene chr3 13949517 + 83169 graph_second 0 146 acgggcaaaa 515 5.35845786226376e-05 0.105263157894737 2 19 4 21 BC047418 knownGene chrX 91466080 + 150344 graph_last 0 3086 aggacaaata 516 5.35845786226376e-05 Inf 16 0 31 0 genomic chr5 92466331 - 0 unique_long l 31 107 cccactgagt 517 5.35845786226376e-05 Inf 16 0 31 0 genomic chr8 125233281 + 0 unique_long l 41 105 gaaacgcaga 518 5.35845786226376e-05 Inf 16 0 31 0 NM_008963 refGene chr2 25734542 - 72846 graph_last 54 177 gccaccctct 519 5.35845786226376e-05 Inf 16 0 31 0 NM_198419 refGene chr13 43186420 + 34339 graph_last l 75 185 taaatccgaa 520 5.35845786226376e-05 6 30 5 58 6 NM_146073 refGene chr17 3537545 - 56573 graph_last 1 2114 tagttactta 521 5.35845786226376e-05 Inf 16 0 31 0 NM_172286 refGene chr8 121911265 - 133955 graph_last l 35 62 tcagggagcc 522 5.35845786226376e-05 19 19 1 37 1 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 523 5.75822992752369e-05 0.264705882352941 9 34 17 38 NM_020573 refGene chr18 13074281 - 62961 graph_last l 83 123 tattgcaagg 524 5.99601255742094e-05 10.5 21 2 41 2 NM_009668 refGene chr18 32621656 + 63661 graph_last l 84 207 ttcagggcgg 525 5.99601255742094e-05 10.5 21 2 41 2 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 526 6.00701200878713e-05 2.3125 74 32 143 35 NM_007984 refGene chr5 141879724 - 108268 graph_last l 76 283 atagtaagct 527 6.09548976900131e-05 0.333333333333333 15 45 29 50 ctacgttctc 528 6.20236925777228e-05 0.340425531914894 16 47 31 52 ctgctatccg 529 6.20236925777228e-05 0.340425531914894 16 47 31 52 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 530 6.8226074399596e-05 5.4 27 5 53 5 aaaatgttgt 531 7.3079135964937e-05 0 0 12 0 13 aagaaaacat 532 7.3079135964937e-05 0.117647058823529 2 17 3 19 NM_146188 refGene chr7 28331257 - 120162 graph_last l 4 44 ccataaagaa 533 7.3079135964937e-05 0.117647058823529 2 17 3 19 NM_013834 refGene chr8 22347179 + 128587 graph_last 2 40 ctttccctgc 534 7.3079135964937e-05 0 0 12 0 13 NM_177616 refGene chr11 4039068 + 17252 graph_last l 3 33 gaatctattt 535 7.3079135964937e-05 0 0 12 0 13 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 536 7.3079135964937e-05 0.117647058823529 2 17 3 19 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 537 7.3079135964937e-05 0 0 12 0 13 gcaatttaac 538 7.744504079744e-05 0.15 3 20 5 22 NM_010787 refGene chr17 46131129 + 59602 graph_last 26 134 tatcactctg 539 7.744504079744e-05 0.15 3 20 5 22 NM_025349 refGene chr10 83218070 - 14139 graph_last l 3 84 tgagcatctc 540 7.744504079744e-05 0.15 3 20 5 22 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 541 8.00533807997553e-05 4 36 9 70 10 NM_021324 refGene chr7 4002060 + 118502 graph_last l 77 162 gcaaagaaaa 542 8.50881189671471e-05 18 18 1 35 1 cccattggag 543 8.78304572284788e-05 Inf 15 0 29 0 gcttccaatc 544 8.78304572284788e-05 Inf 15 0 29 0 NM_011170 refGene chr2 132079926 + 79291 graph_last l 42 75 taacttagca 545 8.78304572284788e-05 Inf 15 0 29 0 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 546 8.78304572284788e-05 Inf 15 0 29 0 AY255605 knownGene chr4_random 6506063 + 99997 graph_second l 31 67 ttgtcactca 547 8.78304572284788e-05 Inf 15 0 29 0 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 548 9.18961573957648e-05 0.0666666666666667 1 15 2 17 gaagtcaaaa 549 9.18961573957648e-05 0.0666666666666667 1 15 2 17 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 550 9.18961573957648e-05 0.0666666666666667 1 15 2 17 NM_019498 refGene chr2 28483315 + 73055 graph_second l 49 149 aatagtttga 551 9.2531500989539e-05 7.66666666666667 23 3 44 3 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 552 9.2531500989539e-05 7.66666666666667 23 3 44 3 NM_013681 refGene chr6 116888565 + 116249 graph_last l 29 70 ccattgattg 553 9.2531500989539e-05 Inf 16 0 30 0 ctctggaaag 554 9.2531500989539e-05 Inf 16 0 30 0 AK044090 knownGene chr9 72562933 - 139102 graph_last l 38 57 ggtctaagcg 555 9.2531500989539e-05 Inf 16 0 30 0 NM_153595 refGene chr10 89048034 - 14566 graph_last l 36 61 tcacagacac 556 9.2531500989539e-05 Inf 16 0 30 0 NM_009224 refGene chr7 38518551 + 120795 graph_last l 31 36 tccctttgag 557 9.2531500989539e-05 Inf 16 0 30 0 tcggatatta 558 9.2531500989539e-05 Inf 16 0 30 0 tgacccttgc 559 9.2531500989539e-05 Inf 16 0 30 0 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 560 9.3078381023831e-05 10.5 21 2 40 2 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 561 9.37045828819044e-05 0.354166666666667 17 48 33 53 AK122380 knownGene chr8 84803497 + 131761 graph_last l 86 147 gcaggtcccc 562 9.40881753172396e-05 7.66666666666667 23 3 45 3 agaaataaaa 563 9.66031246372145e-05 0.0714285714285714 1 14 1 15 atttgtatct 564 9.66031246372145e-05 0.0714285714285714 1 14 1 15 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 565 9.66031246372145e-05 0.0714285714285714 1 14 1 15 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 566 0.000100194480767204 4.71428571428571 33 7 63 8 gaaatttaaa 567 0.000106662679421977 0.3 12 40 24 44 aaaaacaaaa 568 0.000112726678832958 0.111111111111111 2 18 4 20 NM_012053 refGene chr15 78134217 + 48155 graph_last 84 491 aatcctgtgg 569 0.000112726678832958 0.309523809523810 13 42 26 46 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 570 0.000112726678832958 0.111111111111111 2 18 4 20 tactcattat 571 0.000117807351523544 1.97959183673469 97 49 187 54 atgcagagac 572 0.000133960846549813 18 18 1 34 1 NM_011246 refGene chr2 117550768 - 78248 graph_last l 87 114 aggttttgtt 573 0.000140394283822495 Inf 14 0 28 0 NM_011162 refGene chr2 92999933 - 76972 graph_last l 118 242 ccacctggaa 574 0.000140394283822495 5.16666666666667 31 6 59 7 AK083224 knownGene chr14 86523813 - 43463 graph_last l 39 63 cgtccaggtt 575 0.000140394283822495 Inf 14 0 28 0 NM_145422 refGene chr10 88338778 - 14527 graph_last l 50 161 ctattaaata 576 0.000140394283822495 0.230769230769231 6 26 11 29 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 577 0.000140394283822495 Inf 14 0 28 0 tgcttatacc 578 0.000140394283822495 Inf 14 0 28 0 NM_020573 refGene chr18 13081721 - 62961 graph_last l 34 51 tggtcttttt 579 0.000140394283822495 Inf 14 0 28 0 ttataatata 580 0.000150082296626858 0.285714285714286 10 35 20 39 NM_011323 refGene chr15 103059910 + 50127 graph_last l 49 147 gggagactct 581 0.000151061227068670 10 20 2 39 2 NM_025282 refGene chr13 81768655 + 36483 graph_last l 45 76 taaatagaca 582 0.000151061227068670 10 20 2 39 2 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 583 0.000151233547455224 4.57142857142857 32 7 62 8 NM_025507 refGene chr12 83687574 - 30036 graph_last l 62 175 gggaactaag 584 0.000153893657211233 0.272727272727273 9 33 17 36 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 585 0.000155112043184447 0.233333333333333 7 30 14 33 NM_025816 refGene chr6 53234427 + 112812 graph_last l 22 165 accactgata 586 0.000155183508841337 0.208333333333333 5 24 9 27 tttctgtatg 587 0.000157027853341192 0.181818181818182 4 22 7 24 NM_009803 refGene chr1 175076870 - 8438 graph_last l 16 77 gaaagaggga 588 0.000158883226185731 0.125 2 16 3 18 NM_015819 refGene chrX 42688995 - 148431 graph_last l 19 54 taaatcccac 589 0.000158883226185731 0.125 2 16 3 18 NM_008721 refGene chr2 25675901 + 72840 graph_last l 142 341 gatagagagt 590 0.000161471731589902 0.403846153846154 21 52 40 58 ggcctgaggc 591 0.000171146520578014 0.173913043478261 4 23 8 25 gaagcaaaga 592 0.000171414668353032 0.4 22 55 43 61 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 593 0.000177919542862027 0 0 11 0 12 atctttctgg 594 0.000177919542862027 5.6 28 5 54 6 attaaagccc 595 0.000177919542862027 0 0 11 0 12 cagaacccac 596 0.000177919542862027 0.333333333333333 14 42 28 47 ccctgatttt 597 0.000177919542862027 0.25 7 28 13 31 cttaaataaa 598 0.000177919542862027 0 0 11 0 12 gaaagggagg 599 0.000177919542862027 0 0 11 0 12 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 600 0.000177919542862027 0 0 11 0 12 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 601 0.000177919542862027 0 0 11 0 12 NM_023324 refGene chr11 21048770 + 18098 graph_last l 5 33 tcaagatctg 602 0.000177919542862027 0 0 11 0 12 tccctgactt 603 0.000177919542862027 0 0 11 0 12 ttgacaaact 604 0.000177919542862027 0 0 11 0 12 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 605 0.000204693278800525 0.0714285714285714 1 14 2 16 actttatcaa 606 0.000204693278800525 0.0714285714285714 1 14 2 16 caataaactg 607 0.000204693278800525 2.13513513513514 79 37 153 41 NM_009955 refGene chr14 58532048 + 42295 graph_last l 9 34 cttacacgga 608 0.000204693278800525 0.0714285714285714 1 14 2 16 cttacatttc 609 0.000204693278800525 0.0714285714285714 1 14 2 16 ggatggcaat 610 0.000204693278800525 0.0714285714285714 1 14 2 16 ctcttcccac 611 0.000212196841368956 17 17 1 33 1 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 612 0.000212196841368956 17 17 1 33 1 NM_007471 refGene chr16 86207437 + 55668 graph_last l 86 131 gcataagcaa 613 0.00021646922370312 7.33333333333333 22 3 42 3 tatagatatg 614 0.00021646922370312 7.33333333333333 22 3 42 3 genomic chr11 101636695 + 0 unique_long l 25 51 aaccagttct 615 0.000226265633231293 Inf 14 0 27 0 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 616 0.000226265633231293 Inf 14 0 27 0 NM_013681 refGene chr6 116906623 + 116249 graph_last l 64 93 ccgctataac 617 0.000226265633231293 Inf 14 0 27 0 NM_028188 refGene chr3 91290308 - 86768 graph_last l 42 88 cctttgcccc 618 0.000226265633231293 Inf 14 0 27 0 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 619 0.000226265633231293 Inf 14 0 27 0 NM_022332 refGene chr6 17754454 + 110650 graph_last l 5 29 gactatcagt 620 0.000226265633231293 0.0769230769230769 1 13 1 14 NM_027882 refGene chr7 28684262 - 120189 graph_last l 4 31 tatgattacc 621 0.000226265633231293 0.0769230769230769 1 13 1 14 NM_198942 refGene chr17 80944018 - 61440 graph_last l 6 44 tgagtaagaa 622 0.000226265633231293 0.0769230769230769 1 13 1 14 NM_011239 refGene chr16 17844832 + 52007 graph_last 8 62 ttcaatggtg 623 0.000226265633231293 0.0769230769230769 1 13 1 14 NM_172290 refGene chr9 29662908 - 136058 graph_last l 87 145 aagtgtgaaa 624 0.000231053595660707 5.2 26 5 50 5 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 625 0.00023159422377409 2.77777777777778 50 18 96 20 NM_010421 refGene chr9 62025744 + 138265 graph_last 141 536 caatagagac 626 0.00023173963760271 2.77777777777778 50 18 97 20 NM_027016 refGene chr3 31714208 + 83982 graph_last l 55 162 atgggtcatc 627 0.000233432004942469 9.5 19 2 37 2 NM_009149 refGene chr8 112789992 - 133441 graph_last l 34 122 tcctcggtgt 628 0.000233432004942469 9.5 19 2 37 2 acttcagcca 629 0.000234560958970965 0.117647058823529 2 17 4 19 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 630 0.000234560958970965 0.117647058823529 2 17 4 19 NM_011273 refGene chr1 158735049 - 7403 graph_last l 10 76 tggagtttcc 631 0.000234560958970965 0.117647058823529 2 17 4 19 NM_025790 refGene chr13 24706246 - 33412 graph_last l 84 134 tcacctgcta 632 0.000238660170666759 10 20 2 38 2 tctgctaaag 633 0.000238660170666759 10 20 2 38 2 NM_010887 refGene chr13 113119749 - 38276 graph_last l 27 187 gataatgcac 634 0.000243793901199424 0.208333333333333 5 24 10 27 gcgaaggctg 635 0.000243793901199424 0.208333333333333 5 24 10 27 NM_008251 refGene chr16 98082681 - 56348 graph_last l 29 115 taataaaaat 636 0.000243793901199424 0.208333333333333 5 24 10 27 ttattaaaat 637 0.000243793901199424 0.208333333333333 5 24 10 27 tgctgcacgt 638 0.000243935075352363 2.82352941176471 48 17 93 19 gtagtggaag 639 0.000272752280148200 2.15151515151515 71 33 138 36 cctggcactg 640 0.00028136779387798 5.75 23 4 45 4 acccctgacc 641 0.000297210905594571 0.15 3 20 6 22 NM_007393 refGene chr5 141627707 + 108227 graph_last l 345 1033 ccctgagtcc 642 0.000312400321086111 1.84210526315789 105 57 204 63 U65636 knownGene chr3 97585791 - 87247 graph_last 33 172 atcagtggct 643 0.000313889057354417 0.259259259259259 7 27 13 30 NM_011655 refGene chr17 35501335 - 58992 graph_last l 23 98 ctcctcctgc 644 0.000323767933822558 0.181818181818182 4 22 8 24 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 645 0.000323767933822558 0.181818181818182 4 22 8 24 gccaaaccaa 646 0.000325418811588853 0.166666666666667 3 18 5 20 AK076321 knownGene chr9 61996920 + 138255 graph_last l 15 90 gtggagattg 647 0.000325418811588853 0.166666666666667 3 18 5 20 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 648 0.000340916943338906 0.133333333333333 2 15 3 17 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 649 0.000340916943338906 0.133333333333333 2 15 3 17 NM_013818 refGene chr15 81007374 + 48440 graph_last l 4 36 gactgacgag 650 0.000340916943338906 0.133333333333333 2 15 3 17 NM_078478 refGene chr14 31666620 - 40471 graph_last l 66 123 aacaaagcaa 651 0.000344226339795031 17 17 1 32 1 gaaaggagac 652 0.000344226339795031 17 17 1 32 1 NM_178615 refGene chr17 15456505 - 57334 graph_last l 6 72 tgccaagttc 653 0.000344226339795031 17 17 1 32 1 aagacccacc 654 0.000358385634058443 5 25 5 49 5 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 655 0.000358385634058443 5 25 5 49 5 NM_178597 refGene chr14 15621704 - 39454 graph_last l 61 164 cagccctccc 656 0.000361034245370704 9.5 19 2 36 2 NM_011309 refGene chr3 93204953 - 86984 graph_last l 63 93 cccattcggg 657 0.000377078247141772 Inf 13 0 26 0 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 658 0.000377078247141772 Inf 13 0 26 0 gccgaccccg 659 0.000377078247141772 Inf 13 0 26 0 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 660 0.000377078247141772 Inf 13 0 26 0 NM_172473 refGene chr10 47362986 + 12180 graph_last l 19 95 gtataaagtt 661 0.000377078247141772 Inf 13 0 26 0 BB627528 all_est chr5 149262208 + 108843 graph_last 0 51 gtctttccta 662 0.000377078247141772 Inf 13 0 26 0 atgacaatag 663 0.000439531461993981 0 0 10 0 11 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 664 0.000439531461993981 0 0 10 0 11 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 665 0.000439531461993981 0 0 10 0 11 ctttacctag 666 0.000439531461993981 0 0 10 0 11 NM_134037 refGene chr11 100060301 + 23847 graph_last 1 23 gaacatttca 667 0.000439531461993981 0 0 10 0 11 gacgagatgg 668 0.000439531461993981 0 0 10 0 11 NM_023873 refGene chr9 101742563 - 140690 graph_last 1 19 gagtgaaata 669 0.000439531461993981 0 0 10 0 11 NM_008883 refGene chrX 63947316 + 149251 graph_last 1 20 tatagtccat 670 0.000439531461993981 0 0 10 0 11 tcacaatgag 671 0.000439531461993981 0 0 10 0 11 ttccttttgt 672 0.000439531461993981 0 0 10 0 11 gtgaacgtgc 673 0.000447506747848685 0.208333333333333 5 24 10 26 NM_025550 refGene chr14 9444346 - 39138 graph_last l 32 106 taaagccact 674 0.000447506747848685 0.208333333333333 5 24 10 26 tgcagtcatc 675 0.000447506747848685 0.208333333333333 5 24 10 26 tggagagaat 676 0.000447506747848685 0.208333333333333 5 24 10 26 genomic chr13 71065301 + 0 unique_short s 1 51 acacgacgta 677 0.000448139700321897 0.0714285714285714 1 14 2 15 caaatatgtt 678 0.000448139700321897 0.0714285714285714 1 14 2 15 NM_009584 refGene chr5 19858012 + 100918 graph_last l 9 68 cgttggattc 679 0.000448139700321897 0.0714285714285714 1 14 2 15 ctgcctgaga 680 0.000448139700321897 0.0714285714285714 1 14 2 15 tatattgatt 681 0.000448139700321897 0.0714285714285714 1 14 2 15 NM_009577 refGene chr7_random 43406951 - 127376 graph_last l 4 30 ttactgtcct 682 0.000448139700321897 0.0714285714285714 1 14 2 15 ttttctattt 683 0.000448139700321897 0.0714285714285714 1 14 2 15 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 684 0.000493661050731175 0.125 2 16 4 18 ttggaacaat 685 0.000493661050731175 0.125 2 16 4 18 NM_009725 refGene chr3 109064595 - 88118 graph_last 238 466 tggtgaagag 686 0.000494504187750174 2.875 46 16 88 18 NM_172512 refGene chr3 97919894 - 87291 graph_last l 130 345 gaacaggcag 687 0.000501213604482234 0.372093023255814 16 43 31 48 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 688 0.000501912143256816 0.408163265306122 20 49 38 54 NM_173396 refGene chr2 157499191 + 80813 graph_last l 110 176 gtacaataca 689 0.000508444084325242 4.8 24 5 47 5 ttcattattg 690 0.00051326959751212 0.35 14 40 27 44 acacttgcta 691 0.00052317213678898 0.0833333333333333 1 12 1 13 AK036375 knownGene chr2 157636220 - 80833 graph_last 1 40 agaactgtac 692 0.00052317213678898 0.0833333333333333 1 12 1 13 tgtttcatac 693 0.00052317213678898 0.0833333333333333 1 12 1 13 gcccccaatg 694 0.000527326987797656 7 21 3 40 3 NM_174997 refGene chr1 35501828 - 1439 graph_last l 16 91 gaacttatgt 695 0.0005409808611281 0.157894736842105 3 19 6 21 NM_007984 refGene chr5 141879729 + 108268 graph_last l 22 88 ggtcttcaga 696 0.0005409808611281 0.157894736842105 3 19 6 21 NM_183180 refGene chr2 93817607 + 77024 graph_last l 24 68 gtcactattt 697 0.000553822777581933 0.2 4 20 7 22 NM_010629 refGene chr1 167340132 + 7952 graph_last l 42 126 ttgggagaac 698 0.000557319278617451 9 18 2 35 2 gggagggagg 699 0.000568408493570757 16 16 1 31 1 atccgaaaga 700 0.000580626279485198 0.433962264150943 23 53 44 59 NM_009838 refGene chrUn_random 75159037 + 146043 graph_last l 71 286 taagatcctt 701 0.000593828640344415 0.395348837209302 17 43 32 48 aaattggatc 702 0.000627051171113302 Inf 12 0 24 0 NM_011341 refGene chr4 154126850 + 99835 graph_last l 28 62 atggtggttc 703 0.000627051171113302 Inf 12 0 24 0 NM_025482 refGene chr2 181399879 + 82485 graph_last l 38 91 caagctcatc 704 0.000627051171113302 Inf 12 0 24 0 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 705 0.000627051171113302 Inf 12 0 24 0 NM_133849 refGene chr2 179910762 - 82351 graph_last l 64 92 ctctgcaatc 706 0.000627051171113302 Inf 12 0 24 0 CA320703 all_est chr2 22896745 + 72631 graph_last l 46 101 gacaaaggat 707 0.000627051171113302 Inf 12 0 24 0 NM_025368 refGene chr7 37364063 + 120679 graph_last l 14 107 gctgccctgc 708 0.000627051171113302 Inf 12 0 24 0 NM_175514 refGene chr2 84247209 + 76272 graph_last l 32 80 ggcgggaagc 709 0.000627051171113302 Inf 12 0 24 0 ggctgcagcc 710 0.000627051171113302 2.76470588235294 47 17 90 19 gggtaggggt 711 0.000627051171113302 4.5 27 6 53 7 NM_172544 refGene chr12 85830976 + 30167 graph_last l 23 42 gtatgtttga 712 0.000627051171113302 Inf 12 0 24 0 NM_028207 refGene chr11 101636536 - 24017 graph_last l 31 53 gtctacgtat 713 0.000627051171113302 Inf 12 0 24 0 NM_010250 refGene chr11 41756133 - 19197 graph_last l 43 98 tctcactgta 714 0.000627051171113302 Inf 12 0 24 0 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 715 0.000627051171113302 Inf 12 0 24 0 NM_015744 refGene chr15 56417904 + 47061 graph_last l 29 65 aagatgcaca 716 0.000632665460285555 Inf 13 0 25 0 NM_026669 refGene chr15 101353787 + 49918 graph_last l 41 132 actgagttcc 717 0.000632665460285555 Inf 13 0 25 0 genomic chrM 4414 + 0 unique_long l 914 2465 aggaggactt 718 0.000632665460285555 Inf 13 0 25 0 X57780 knownGene chrM 5236 - 142531 graph_second 45 97 tcgaattgca 719 0.000632665460285555 Inf 13 0 25 0 NM_007471 refGene chr16 86207600 - 55668 graph_last l 75 198 tatctttgga 720 0.00064475868575452 5.5 22 4 43 4 NM_011219 refGene chr6 22928921 + 110854 graph_last l 25 196 gtttttatct 721 0.000650092486019447 0.25 6 24 11 27 NM_008617 refGene chr5 134618530 + 107726 graph_last l 110 325 tctttggaac 722 0.000662606871099675 4.14285714285714 29 7 57 8 tgaacccact 723 0.000682656159368608 0.259259259259259 7 27 14 30 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 724 0.000707058744950368 2 78 39 151 43 taatatgtag 725 0.000717170752318163 0.142857142857143 2 14 3 16 tttatataaa 726 0.000717170752318163 0.142857142857143 2 14 3 16 ttgggccaga 727 0.000767645660996373 2.26923076923077 59 26 115 29 taaaagaaaa 728 0.000803994691410055 0.476190476190476 30 63 58 70 gcaatctgat 729 0.000807694805402834 1.975 79 40 153 44 NM_025285 refGene chr3 8633892 + 82940 graph_last l 93 328 ggtgatgatg 730 0.000828382957183379 0.442307692307692 23 52 44 58 tgtgtgagga 731 0.000828382957183379 0.227272727272727 5 22 9 24 NM_026421 refGene chr5 99138773 - 105093 graph_last 33 162 ttaaacctca 732 0.000828382957183379 0.227272727272727 5 22 9 24 tgataaaagt 733 0.000839337008317417 0.409090909090909 18 44 34 49 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 734 0.000864567543544712 2.92307692307692 38 13 74 14 ctgtaatgat 735 0.000883281607754776 9 18 2 34 2 NM_015814 refGene chr7 104213348 - 124305 graph_last l 70 135 ggagcgctat 736 0.000883281607754776 9 18 2 34 2 NM_026147 refGene chr4 3762091 - 90957 graph_last 191 634 cctaccaaga 737 0.000897444033694875 0.506849315068493 37 73 72 81 caaaaataaa 738 0.000912971145585995 1.78947368421053 102 57 197 63 atctgtactc 739 0.00093844222738025 0.303030303030303 10 33 20 36 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 740 0.000965772558297355 4 28 7 55 8 NM_007881 refGene chr6 126661781 - 116898 graph_last l 106 385 ggcctgcttc 741 0.000978374429328525 0.4 18 45 35 50 tcctgaaata 742 0.000980010332355182 2.36363636363636 52 22 101 24 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 743 0.000990172708841711 3.75 30 8 58 9 agaagtgttt 744 0.000998364253045416 0.0769230769230769 1 13 2 14 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 745 0.000998364253045416 0.0769230769230769 1 13 2 14 gggcagaggt 746 0.000998364253045416 0.0769230769230769 1 13 2 14 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 747 0.000998364253045416 0.25 6 24 12 27 NM_016744 refGene chr2 80199013 - 76137 graph_last l 25 33 atttggtcat 748 0.000998406673141432 Inf 12 0 23 0 ccatattatg 749 0.000998406673141432 0.166666666666667 3 18 6 20 NM_020591 refGene chr11 68912604 + 21005 graph_last l 26 59 cgtgatggag 750 0.000998406673141432 Inf 12 0 23 0 NM_175138 refGene chr4 41685845 - 92512 graph_last l 26 145 gcaataatgg 751 0.000998406673141432 0.166666666666667 3 18 6 20 NM_033264 refGene chr9 114798597 - 141710 graph_second l 24 54 ggacggcagt 752 0.000998406673141432 Inf 12 0 23 0 NM_011676 refGene chr11 77920095 - 21940 graph_last 1 58 gggacagcca 753 0.000998406673141432 Inf 12 0 23 0 NM_030725 refGene chr2 93571606 + 76996 graph_last l 56 84 tctggttaca 754 0.000998406673141432 Inf 12 0 23 0 NM_146005 refGene chr10 73135380 + 13402 graph_last 36 79 ttcttcagac 755 0.000998406673141432 Inf 12 0 23 0 taaaccactg 756 0.00100610060721724 5.5 22 4 42 4 attaatcaaa 757 0.00100890683346819 0.133333333333333 2 15 4 17 NM_026681 refGene chr12 96467483 - 30659 graph_last l 11 51 gtgagggtgt 758 0.00100890683346819 0.133333333333333 2 15 4 17 NM_025520 refGene chr6 57159890 - 113026 graph_last 7 60 gttattttgg 759 0.00100890683346819 0.133333333333333 2 15 4 17 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 760 0.00103550978858736 0.654545454545455 108 165 209 182 NM_026369 refGene chr1 156203375 + 7249 graph_last b 20 105 atttcccgag 761 0.00103630364186335 0.210526315789474 4 19 7 21 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 762 0.00103630364186335 0.210526315789474 4 19 7 21 taaataaaga 763 0.00103630364186335 0.210526315789474 4 19 7 21 BB674281 all_est chr3 90690195 + 86687 graph_last 0 19 aattaatcaa 764 0.00104216487665039 0 0 9 0 10 NM_007794 refGene chr8 107206516 + 132995 graph_last 1 27 agacctgtaa 765 0.00104216487665039 0 0 9 0 10 genomic chr14 48083563 + 0 unique_long l 3 27 agatattaaa 766 0.00104216487665039 0 0 9 0 10 NM_026648 refGene chr8 121477835 - 133909 graph_last l 16 42 agcagatggt 767 0.00104216487665039 0 0 9 0 10 AK032339 knownGene chr17 32966326 - 58719 graph_last 2 22 ccctgactgt 768 0.00104216487665039 0 0 9 0 10 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 769 0.00104216487665039 0 0 9 0 10 NM_146170 refGene chr6 87849266 + 114579 graph_last 2 22 gccacgtata 770 0.00104216487665039 0 0 9 0 10 gtcacgaaaa 771 0.00104216487665039 0 0 9 0 10 NM_010721 refGene chr18 57123858 + 65070 graph_last 2 19 gtgactagat 772 0.00104216487665039 0 0 9 0 10 gtgttttgaa 773 0.00104216487665039 0 0 9 0 10 NM_199143 refGene chr6 55350900 + 112950 graph_last 1 13 tagagctgtc 774 0.00104216487665039 0 0 9 0 10 tatttgcttt 775 0.00104216487665039 0 0 9 0 10 NM_025650 refGene chr10 82754685 - 14090 graph_last l 6 34 tctgtttctg 776 0.00104216487665039 0 0 9 0 10 NM_080844 refGene chr1 164569762 - 7788 graph_last l 2 21 tgagtggttt 777 0.00104216487665039 0 0 9 0 10 NM_009988 refGene chr16 79506322 + 55429 graph_last l 5 22 ttctgcagtc 778 0.00104216487665039 0 0 9 0 10 NM_008709 refGene chr12 13191380 - 26350 graph_last 2 26 tttatgaaaa 779 0.00104216487665039 0 0 9 0 10 NM_021896 refGene chr3 83927215 - 86252 graph_last l 18 75 tacggttcct 780 0.00107924273016656 0.25 6 24 11 26 NM_028564 refGene chr8 106224614 + 132901 graph_last l 11 80 gctttgtttt 781 0.00108896608990546 0.176470588235294 3 17 5 19 Y00769 knownGene chr8 130643980 + 134632 graph_last 0 71 cttgctctgt 782 0.00118081041368664 0.090909090909091 1 11 1 12 gcggtgaatc 783 0.00118081041368664 0.090909090909091 1 11 1 12 ggctttggtc 784 0.00118081041368664 0.090909090909091 1 11 1 12 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 785 0.00118081041368664 0.090909090909091 1 11 1 12 genomic chr14 58532810 + 0 unique_long l 5 31 ttagaccttt 786 0.00118081041368664 0.090909090909091 1 11 1 12 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 787 0.00121057027719579 0.464285714285714 26 56 50 62 NM_011588 refGene chr7 10287113 - 118856 graph_last l 64 160 agaggtggtt 788 0.001229640271883 5 25 5 48 6 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 789 0.001229640271883 5 25 5 48 6 cttgcaatct 790 0.00132712235220756 14 14 1 28 1 AF031816 knownGene chr9 43684219 - 136913 graph_last l 43 91 gtgatagcgt 791 0.00132712235220756 14 14 1 28 1 NM_024186 refGene chr13 89912980 + 36756 graph_last 37 105 gataggaata 792 0.00134658420543326 0.28 7 25 13 28 NM_008098 refGene chr6 35451578 - 111690 graph_last l 25 63 atcagtctat 793 0.00135773568380753 8.5 17 2 32 2 NM_007508 refGene chr16 44062095 - 53860 graph_last l 42 142 ctcagaaagc 794 0.00135773568380753 8.5 17 2 32 2 gagtcactct 795 0.00135773568380753 8.5 17 2 32 2 NM_026823 refGene chr1 138075254 + 6492 graph_last l 59 231 ggagggttgg 796 0.00135773568380753 0.3 9 30 18 33 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 797 0.00135773568380753 8.5 17 2 32 2 NM_018804 refGene chr3 90895018 - 86721 graph_last l 44 123 tttatggaca 798 0.00135773568380753 8.5 17 2 32 2 NM_026438 refGene chr10 63563394 + 12886 graph_last l 34 146 tttactgtgt 799 0.00141855219987137 0.3125 10 32 20 35 cagaaacagg 800 0.00151226398376256 0.142857142857143 2 14 3 15 NM_019796 refGene chr9 91413676 - 140127 graph_last 14 65 gcaaacaatc 801 0.00151226398376256 0.142857142857143 2 14 3 15 NM_199022 refGene chr2 125928154 - 78833 graph_last l 9 85 gtggaagcga 802 0.00151226398376256 0.142857142857143 2 14 3 15 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 803 0.00153034713359070 2.30434782608696 53 23 102 25 NM_178920 refGene chr15 55705037 + 47025 graph_last l 47 75 ctcagtgtgg 804 0.00159350982766008 Inf 11 0 22 0 NM_007995 refGene chr2 25851813 - 72868 graph_last l 26 83 gatgacccag 805 0.00159350982766008 Inf 11 0 22 0 NM_009976 refGene chr2 149268091 + 80122 graph_last l 49 73 gcaggtactg 806 0.00159350982766008 Inf 11 0 22 0 tatgcctgtc 807 0.00159350982766008 Inf 11 0 22 0 tctctgaatg 808 0.00159350982766008 Inf 11 0 22 0 cagtctctca 809 0.00167785875575622 0.450980392156863 23 51 44 56 NM_019793 refGene chr9 58246662 - 137907 graph_last l 251 568 gagactagca 810 0.00168663826589482 2.6875 43 16 83 18 atctactgtg 811 0.00174103174304728 4.6 23 5 44 5 NM_010487 refGene chr9 22638223 - 135759 graph_last l 47 135 ccccacacac 812 0.00174103174304728 4.6 23 5 44 5 NM_010223 refGene chr8 70802228 + 130947 graph_last l 148 335 gggtgcagcc 813 0.00174103174304728 4.6 23 5 44 5 AK122280 knownGene chrX 84771967 - 150054 graph_last l 55 119 gccccagact 814 0.00182554714645721 6.33333333333333 19 3 36 3 ctgggcccag 815 0.00187051558039944 4.8 24 5 47 6 gtggttcaca 816 0.00187051558039944 4.8 24 5 47 6 NM_009790 refGene chr12 95768593 + 30604 graph_last l 111 171 cagcttgatg 817 0.0019525644653868 4.33333333333333 26 6 50 7 gtgccaggaa 818 0.00197264932051851 0.222222222222222 4 18 7 20 ccacactgtc 819 0.00198143782799079 0.1875 3 16 5 18 NM_146183 refGene chr7_random 1476992 - 126495 graph_last 12 78 cccggggcga 820 0.00198143782799079 0.1875 3 16 5 18 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 821 0.00198143782799079 0.1875 3 16 5 18 NM_011042 refGene chr15 104593003 + 50270 graph_last 85 352 gaaatgtaag 822 0.00203793923045968 0.44 22 50 43 55 genomic chr1 58317986 + 0 unique_long l 4 32 gaaaaaggaa 823 0.00208636888861895 0.142857142857143 2 14 4 16 NM_008672 refGene chr7 135586739 - 126271 graph_last l 42 184 tagagtgtgc 824 0.00208683629560191 0.296296296296296 8 27 16 30 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 825 0.00209886039325199 8 16 2 31 2 AK048138 knownGene chr15 80705321 - 48408 graph_last l 59 103 cgttccacca 826 0.00209886039325199 8 16 2 31 2 NM_175543 refGene chr11 79268990 + 22077 graph_last l 39 112 gggctgggcc 827 0.00209886039325199 8 16 2 31 2 genomic chr3 77282410 + 0 unique_long l 61 81 tgattatgtg 828 0.00209886039325199 8 16 2 31 2 NM_019658 refGene chr19 53776108 - 70518 graph_last l 9 55 aatctgaaaa 829 0.0021518206955906 0.0833333333333333 1 12 2 13 NM_011129 refGene chr11 87150159 + 22798 graph_last l 63 154 acccggctag 830 0.0021518206955906 14 14 1 27 1 NM_144806 refGene chr11 61301021 - 20552 graph_last l 12 54 acctttttag 831 0.0021518206955906 0.0833333333333333 1 12 2 13 NM_178655 refGene chr3 130442791 - 89080 graph_last l 30 61 ccctatgtcg 832 0.0021518206955906 14 14 1 27 1 NM_009440 refGene chrX 93387324 + 150509 graph_last l 3 24 gccccgatgg 833 0.0021518206955906 0.0833333333333333 1 12 2 13 ggcagccccc 834 0.0021518206955906 14 14 1 27 1 gggatgctct 835 0.0021518206955906 0.0833333333333333 1 12 2 13 NM_028707 refGene chr18 36207883 - 63935 graph_last l 7 35 tactactgta 836 0.0021518206955906 0.0833333333333333 1 12 2 13 tccctgtggt 837 0.0021518206955906 14 14 1 27 1 NM_027310 refGene chr4 124067106 + 97120 graph_last l 10 64 tggtgtcgat 838 0.0021518206955906 0.0833333333333333 1 12 2 13 NM_013879 refGene chr5 114215618 + 106194 graph_last l 95 218 tgtgccccag 839 0.00216914208628155 5 20 4 39 4 NM_175245 refGene chr14 91849844 - 43593 graph_last 42 164 tttgtcacca 840 0.00220146495471577 0.291666666666667 7 24 13 27 NM_177887 refGene chr5_random 412529 - 108970 graph_last 70 146 cctttctgtc 841 0.00247812348756607 4.4 22 5 42 5 AK122380 knownGene chr8 84801596 + 131761 graph_last l 67 149 ctacagttcc 842 0.00247812348756607 4.4 22 5 42 5 aactgaacaa 843 0.00256060254617767 0 0 8 0 9 aagatgcatt 844 0.00256060254617767 Inf 11 0 21 0 acagggttgg 845 0.00256060254617767 0 0 8 0 9 NM_009308 refGene chr18 31773220 - 63593 graph_last 1 28 acgtatttaa 846 0.00256060254617767 0 0 8 0 9 actggtgact 847 0.00256060254617767 Inf 11 0 21 0 agatccagct 848 0.00256060254617767 Inf 11 0 21 0 agattattgt 849 0.00256060254617767 0 0 8 0 9 NM_172666 refGene chr2 76323924 + 75908 graph_last 1 24 agcctatgat 850 0.00256060254617767 0 0 8 0 9 NM_178060 refGene chr11 98352515 + 23676 graph_second l 6 31 agtctgtttc 851 0.00256060254617767 0 0 8 0 9 NM_023324 refGene chr11 21047992 + 18098 graph_last l 10 44 ataactgatc 852 0.00256060254617767 0 0 8 0 9 attgattaaa 853 0.00256060254617767 0 0 8 0 9 caaagaaaac 854 0.00256060254617767 Inf 11 0 21 0 genomic chr11 53229377 + 0 unique_long l 3 44 cctaatgtct 855 0.00256060254617767 0 0 8 0 9 NM_178679 refGene chr10 69779847 - 13250 graph_last l 26 73 cggactatga 856 0.00256060254617767 Inf 11 0 21 0 cggagaccct 857 0.00256060254617767 0 0 8 0 9 genomic chr11 30013082 - 0 unique_long l 19 65 ctctggatgg 858 0.00256060254617767 Inf 11 0 21 0 BC044772 knownGene chr12 19510819 + 26628 graph_last l 43 59 ctgtttttac 859 0.00256060254617767 Inf 11 0 21 0 NM_011283 refGene chr1 4359714 + 62 graph_last 0 7 cttattcttc 860 0.00256060254617767 0 0 8 0 9 NM_145066 refGene chr6 13631060 - 110464 graph_last l 5 21 gaagagcatt 861 0.00256060254617767 0 0 8 0 9 gaatagataa 862 0.00256060254617767 0 0 8 0 9 NM_008791 refGene chr16 98535719 + 56369 graph_last l 36 102 gatgcaccag 863 0.00256060254617767 Inf 11 0 21 0 gcatagggta 864 0.00256060254617767 0 0 8 0 9 gcctcccctt 865 0.00256060254617767 0 0 8 0 9 gcctctggtg 866 0.00256060254617767 0.25 5 20 9 22 genomic chr5_random 2615367 - 0 unique_long l 264 923 gcgccagctc 867 0.00256060254617767 2.14814814814815 58 27 112 30 NM_172659 refGene chr2 27289981 + 72975 graph_last l 7 38 ggcactgtcc 868 0.00256060254617767 0 0 8 0 9 T25556 all_est chr4 126054615 + 97288 graph_last 0 9 ggctaagtag 869 0.00256060254617767 0 0 8 0 9 gtgctgccag 870 0.00256060254617767 Inf 11 0 21 0 NM_008448 refGene chr18 6415243 - 62563 graph_last 31 83 gttaattttg 871 0.00256060254617767 Inf 11 0 21 0 NM_138752 refGene chr7 21997012 - 119696 graph_last 2 16 gttattttgt 872 0.00256060254617767 0 0 8 0 9 NM_010140 refGene chr16 64232989 - 54754 graph_last 1 18 gttcatttag 873 0.00256060254617767 0 0 8 0 9 NM_007421 refGene chr12 108213627 - 31438 graph_last 2 76 taaaattgtt 874 0.00256060254617767 0.25 5 20 9 22 NM_175706 refGene chr2 22109787 + 72602 graph_last l 54 76 taaataacta 875 0.00256060254617767 Inf 11 0 21 0 CD536971 all_est chr9 46409029 - 137120 graph_last 0 19 tacatacact 876 0.00256060254617767 0 0 8 0 9 NM_019389 refGene chr13 87775095 - 36664 graph_last l 5 23 tatgaatgct 877 0.00256060254617767 0 0 8 0 9 NM_029979 refGene chr14 58039479 - 42269 graph_last 5 18 tcagttgtgg 878 0.00256060254617767 0 0 8 0 9 NM_007460 refGene chr10 83072244 - 14123 graph_last l 24 108 tgaagagaga 879 0.00256060254617767 0.25 5 20 9 22 genomic chr9 72561130 - 0 unique_long l 39 57 tgacaagaca 880 0.00256060254617767 Inf 11 0 21 0 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 881 0.00256060254617767 Inf 11 0 21 0 ttgaagcata 882 0.00256060254617767 Inf 11 0 21 0 NM_010497 refGene chr1 66764681 + 3174 graph_last 1 20 acagttaatt 883 0.00264313020035374 0.1 1 10 1 11 genomic chr19 46300922 - 0 unique_long l 4 44 actcaaatgg 884 0.00264313020035374 0.1 1 10 1 11 NM_145465 refGene chr14 114392588 + 44472 graph_last l 10 41 atccagcaca 885 0.00264313020035374 0.1 1 10 1 11 atgtactcgg 886 0.00264313020035374 0.1 1 10 1 11 NM_010894 refGene chr2 79814959 - 76114 graph_last l 7 44 cagttgcaat 887 0.00264313020035374 0.1 1 10 1 11 gacaaaggtg 888 0.00264313020035374 0.1 1 10 1 11 AK010983 knownGene chr8 71207329 + 131015 graph_last 2 82 gcactgcgca 889 0.00264313020035374 0.1 1 10 1 11 gcgaagctca 890 0.00264313020035374 0.491803278688525 30 61 58 67 NM_177583 refGene chr9 69250717 - 138875 graph_last l 7 33 gtaagtcttg 891 0.00264313020035374 0.1 1 10 1 11 NM_177699 refGene chr8 106814644 - 132950 graph_last l 2 22 tctttattca 892 0.00264313020035374 0.1 1 10 1 11 NM_013684 refGene chr17 15169236 + 57303 graph_last l 12 45 tgatcatact 893 0.00264313020035374 0.1 1 10 1 11 ttatcctgtc 894 0.00264313020035374 0.1 1 10 1 11 NM_133195 refGene chr18 26104576 - 63468 graph_last l 50 115 acataaagat 895 0.00268092791311436 6 18 3 34 3 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 896 0.00268092791311436 6 18 3 34 3 NM_010193 refGene chr9 65145351 - 138457 graph_last 18 100 gcaattgaca 897 0.00271352971112219 0.210526315789474 4 19 8 21 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 898 0.00276807219338468 3.85714285714286 27 7 52 8 aatccttgcc 899 0.00308563532460269 0.272727272727273 6 22 11 24 NM_175255 refGene chr11 51417047 + 19792 graph_last l 4 67 caataaaaca 900 0.00308850204757185 0.153846153846154 2 13 3 14 caatgctgcc 901 0.00308850204757185 0.153846153846154 2 13 3 14 cctgaatgac 902 0.00308850204757185 0.153846153846154 2 13 3 14 gaacatattt 903 0.00308850204757185 0.153846153846154 2 13 3 14 gtcacaccac 904 0.00308850204757185 0.153846153846154 2 13 3 14 tctgttagct 905 0.00308850204757185 0.153846153846154 2 13 3 14 NM_009466 refGene chr5 64716776 - 103290 graph_last 0 52 tgtagactgg 906 0.00308850204757185 0.153846153846154 2 13 3 14 NM_026899 refGene chr4 153846956 + 99801 graph_last l 68 159 gcctgccctg 907 0.00311440532265504 8 16 2 30 2 genomic chr12 105130081 + 0 unique_long l 81 156 gggatggcca 908 0.00311440532265504 8 16 2 30 2 NM_013873 refGene chr15 85743411 + 48930 graph_second l 58 114 tgtggttcca 909 0.00311440532265504 8 16 2 30 2 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 910 0.00319903522000783 5 20 4 38 4 NM_019978 refGene chr3 56947015 + 85071 graph_last l 80 133 ttcttaaact 911 0.00319903522000783 5 20 4 38 4 NM_023799 refGene chr19 45889195 - 70128 graph_last l 64 233 caagaggcac 912 0.00331367570238035 0.34375 11 32 22 35 genomic chr18 6427244 - 0 unique_long l 28 108 gtgaaacgct 913 0.00335460397264599 13 13 1 25 1 NM_011844 refGene chr6 90281126 + 114831 graph_last 41 102 tgagcatcgg 914 0.00335460397264599 13 13 1 25 1 NM_019802 refGene chr6 73475733 - 113867 graph_last l 14 117 actgcttgcc 915 0.00336264982974021 0.1875 3 16 6 18 ccctgacttc 916 0.00342549569390984 13 13 1 26 1 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 917 0.00342549569390984 13 13 1 26 1 gtgatgcaaa 918 0.00344502430637095 0.2 3 15 5 17 gtgttgtcgg 919 0.00344502430637095 0.2 3 15 5 17 NM_145550 refGene chr4 106219513 + 95843 graph_last l 18 112 tgtggggccc 920 0.00344502430637095 0.2 3 15 5 17 NM_021278 refGene chrX 155230346 + 152783 graph_last l 30 91 caagttcttt 921 0.00361978944824670 0.238095238095238 5 21 10 23 gatttctgtc 922 0.00361978944824670 0.238095238095238 5 21 10 23 caccaccaca 923 0.00362445383438393 0.405405405405405 15 37 29 41 cacgctcccg 924 0.00363207145800159 3.1 31 10 60 11 gtttcacttt 925 0.00388748300775865 3.375 27 8 53 9 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 926 0.00389165240608376 4 24 6 47 7 NM_009327 refGene chr5 113995054 + 106166 graph_last l 152 294 caggcttggg 927 0.00392231840475404 3.71428571428571 26 7 50 8 X57780 knownGene chrM 6672 - 142531 graph_second 152 213 tggtgtaagc 928 0.00399441749628151 3.5 28 8 54 9 NM_008487 refGene chr3 90799038 + 86700 graph_last l 14 79 aatggatgca 929 0.00406066681209687 0.142857142857143 2 14 4 15 NM_133676 refGene chr14 42721147 - 41088 graph_last l 13 52 acgccacaat 930 0.00406066681209687 0.142857142857143 2 14 4 15 NM_008640 refGene chr12 9084302 - 26222 graph_last 25 107 caaccatcat 931 0.00406066681209687 0.142857142857143 2 14 4 15 NM_007552 refGene chr2 18792200 + 72377 graph_last 0 60 cattcaaaaa 932 0.00406066681209687 0.142857142857143 2 14 4 15 gaacttaaag 933 0.00406066681209687 0.142857142857143 2 14 4 15 gaataaagag 934 0.00406066681209687 0.142857142857143 2 14 4 15 gcctcctcct 935 0.00406066681209687 0.142857142857143 2 14 4 15 NM_009768 refGene chr10 82599398 + 14067 graph_last 103 233 gggagctgtg 936 0.00406066681209687 5.66666666666667 17 3 33 3 NM_138660 refGene chr11 98417334 + 23682 graph_last l 10 51 tgtgttgttt 937 0.00406066681209687 0.142857142857143 2 14 4 15 ttaattcatt 938 0.00406066681209687 0.142857142857143 2 14 4 15 NM_026095 refGene chr10 77678746 + 13664 graph_last l 36 132 tgcatatgtc 939 0.00412949837790601 0.344827586206897 10 29 19 32 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 940 0.00413318531377857 0.354838709677419 11 31 21 34 ttccccaccc 941 0.00413318531377857 0.354838709677419 11 31 21 34 genomic chrM 5841 + 0 unique_long l 160 1099 aaacccccag 942 0.00424213986307391 Inf 10 0 20 0 NM_013509 refGene chr6 126683741 - 116901 graph_last l 35 99 accaagtttg 943 0.00424213986307391 Inf 10 0 20 0 NM_153580 refGene chr7 118957076 + 125136 graph_last 22 61 actgctccca 944 0.00424213986307391 Inf 10 0 20 0 CA316586 all_est chr6 30663632 + 111294 graph_last l 19 56 agaggagctg 945 0.00424213986307391 Inf 10 0 20 0 ataaaaactc 946 0.00424213986307391 Inf 10 0 20 0 atttttaaaa 947 0.00424213986307391 Inf 10 0 20 0 cacaatgtga 948 0.00424213986307391 Inf 10 0 20 0 genomic chr3 130443077 + 0 unique_long l 24 48 caggtattag 949 0.00424213986307391 Inf 10 0 20 0 NM_177296 refGene chr6 29392712 - 111132 graph_last 19 58 caggttgaca 950 0.00424213986307391 Inf 10 0 20 0 genomic chr5 135809939 - 0 unique_long l 44 102 ccggcctccc 951 0.00424213986307391 Inf 10 0 20 0 genomic chr5 135848574 + 0 unique_long l 34 144 cgccctggct 952 0.00424213986307391 Inf 10 0 20 0 NM_008593 refGene chr4 113815543 - 96269 graph_last 0 51 gcttgaaaaa 953 0.00424213986307391 Inf 10 0 20 0 NM_182839 refGene chr13 71586451 + 36077 graph_last l 37 107 ggtgttctga 954 0.00424213986307391 Inf 10 0 20 0 NM_010638 refGene chr19 23310804 + 68718 graph_last l 26 47 gtagccctaa 955 0.00424213986307391 Inf 10 0 20 0 NM_008910 refGene chr12 68703041 + 28812 graph_last l 61 75 tagaaaatca 956 0.00424213986307391 Inf 10 0 20 0 tccctgtgta 957 0.00424213986307391 Inf 10 0 20 0 NM_177089 refGene chr8 24012895 - 128650 graph_last l 25 46 tgctgtaact 958 0.00424213986307391 Inf 10 0 20 0 ccaggagagg 959 0.00442415780642738 0.263157894736842 5 19 9 21 NM_009720 refGene chr11 55071811 - 20087 graph_last l 56 134 taataaagtc 960 0.00442415780642738 0.263157894736842 5 19 9 21 NM_025279 refGene chr13 58182021 - 35372 graph_second 1 37 atgttagtta 961 0.00447887763085964 0.090909090909091 1 11 2 12 BB647300 all_est chr12 79131294 + 29599 graph_last l 4 31 ctggaaacag 962 0.00447887763085964 0.090909090909091 1 11 2 12 NM_008718 refGene chr7 13493111 + 119039 graph_last l 10 89 ggccagttgg 963 0.00447887763085964 0.090909090909091 1 11 2 12 NM_011605 refGene chr10 93515849 - 14837 graph_last l 15 68 gtgatgtaat 964 0.00447887763085964 0.090909090909091 1 11 2 12 NM_182650 refGene chr6 51936949 + 112726 graph_last l 5 29 tcacctgaaa 965 0.00447887763085964 0.090909090909091 1 11 2 12 ctttctcaaa 966 0.00470362575200104 0.222222222222222 4 18 8 20 ggtgagcctg 967 0.00470362575200104 4.75 19 4 36 4 taaaagttgt 968 0.00470362575200104 0.222222222222222 4 18 8 20 NM_013928 refGene chr3 70232737 + 85733 graph_last l 62 248 gttccttggg 969 0.00504576909717937 0.354838709677419 11 31 22 34 aaaaagtacc 970 0.00515548750631084 12 12 1 24 1 tatcatcttt 971 0.00515548750631084 12 12 1 24 1 tttattaaat 972 0.00515548750631084 12 12 1 24 1 tttgcagcat 973 0.00515548750631084 12 12 1 24 1 NM_010562 refGene chr7 97874520 + 123908 graph_last l 55 216 ggagggatca 974 0.00518263131380843 0.285714285714286 6 21 11 23 NM_025936 refGene chr11 35449596 - 18948 graph_last l 26 105 tgcacacaag 975 0.00518263131380843 0.285714285714286 6 21 11 23 NM_133350 refGene chr5 29202901 + 101526 graph_last l 62 125 acctccaggc 976 0.005234417495559 4 20 5 39 5 NM_013681 refGene chr6 116901195 + 116249 graph_last l 100 219 ctggagatgt 977 0.005234417495559 4 20 5 39 5 NM_019535 refGene chr4 84058309 + 94668 graph_last l 76 184 gccagttttc 978 0.005234417495559 4 20 5 39 5 NM_009900 refGene chr16 20326531 + 52187 graph_last l 109 178 agtggctaat 979 0.0052425882204081 4.2 21 5 40 5 NM_026757 refGene chr11 69809604 - 21121 graph_last l 84 286 gtgcgctaga 980 0.00556429852742007 4 24 6 46 7 ctttgcaatg 981 0.00575981645283655 0.393939393939394 13 33 25 37 NM_025844 refGene chr9 18477078 + 135458 graph_last 3 50 aacttttgtt 982 0.00593120167865064 0.111111111111111 1 9 1 10 NM_025543 refGene chr2 153430747 + 80394 graph_last l 9 22 aagacaatac 983 0.00593120167865064 0.111111111111111 1 9 1 10 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 984 0.00593120167865064 0.111111111111111 1 9 1 10 NM_008717 refGene chr6 85114131 - 114381 graph_last 1 6 aatatgcttt 985 0.00593120167865064 0 0 7 0 8 NM_172512 refGene chr3 97919899 + 87291 graph_last 2 15 acaaaatcac 986 0.00593120167865064 0 0 7 0 8 acgggaaaaa 987 0.00593120167865064 0 0 7 0 8 NM_009846 refGene chr10 45183750 - 12083 graph_last 1 11 agaagttact 988 0.00593120167865064 0 0 7 0 8 NM_009178 refGene chr9 35830752 - 136355 graph_last l 8 28 agaataaaga 989 0.00593120167865064 0 0 7 0 8 agatcaaaag 990 0.00593120167865064 0 0 7 0 8 ataccatctc 991 0.00593120167865064 0.111111111111111 1 9 1 10 atgatgctgt 992 0.00593120167865064 0 0 7 0 8 NM_134167 refGene chr6 67277823 - 113470 graph_last 0 32 atgctaaaaa 993 0.00593120167865064 0.111111111111111 1 9 1 10 NM_007944 refGene chr8 72752711 - 131158 graph_last l 8 46 atgtatgcat 994 0.00593120167865064 0 0 7 0 8 caaaagaagg 995 0.00593120167865064 0 0 7 0 8 cacacgatac 996 0.00593120167865064 0 0 7 0 8 NM_145505 refGene chr19 57584252 + 70766 graph_last l 3 25 caggacaaag 997 0.00593120167865064 0.111111111111111 1 9 1 10 cagggcgatg 998 0.00593120167865064 0 0 7 0 8 NM_026892 refGene chr9 122878820 - 142179 graph_last l 6 18 caggtgtgag 999 0.00593120167865064 0 0 7 0 8 cgaaaaaaaa 1000 0.00593120167865064 0 0 7 0 8 NM_021549 refGene chr7 37781909 - 120715 graph_last 6 67 cgtcactgcc 1001 0.00593120167865064 0.111111111111111 1 9 1 10 NM_009454 refGene chr2 79285572 + 76085 graph_last l 15 125 ctcctgaagg 1002 0.00593120167865064 0.25 5 20 10 22 NM_024194 refGene chr3 162412720 + 90676 graph_last 0 23 cttcgtgttc 1003 0.00593120167865064 0 0 7 0 8 NM_024209 refGene chr2 39498981 - 73998 graph_last l 7 18 gaaaaagtag 1004 0.00593120167865064 0 0 7 0 8 NM_029077 refGene chr4 45792216 + 92915 graph_last 3 33 gaagaatccg 1005 0.00593120167865064 0 0 7 0 8 gagatgccga 1006 0.00593120167865064 0 0 7 0 8 NM_175201 refGene chr4 43416344 - 92730 graph_last 1 30 gcgctgtttg 1007 0.00593120167865064 0 0 7 0 8 NM_178880 refGene chr16 93083526 + 56030 graph_last l 24 166 gcggccgaca 1008 0.00593120167865064 5.66666666666667 17 3 32 3 genomic chr15 44284881 - 0 unique_long l 2 12 gctagcatac 1009 0.00593120167865064 0 0 7 0 8 NM_008899 refGene chr4 22442105 - 91739 graph_last l 3 20 ggaaatggct 1010 0.00593120167865064 0.111111111111111 1 9 1 10 NM_177876 refGene chr5 122967405 - 106929 graph_last l 8 69 ggagctccgg 1011 0.00593120167865064 0 0 7 0 8 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 1012 0.00593120167865064 5.66666666666667 17 3 32 3 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 1013 0.00593120167865064 0 0 7 0 8 NM_025284 refGene chr6 73997132 - 113918 graph_last 2 10 gggaaatcgc 1014 0.00593120167865064 0 0 7 0 8 ggtcacatct 1015 0.00593120167865064 0.111111111111111 1 9 1 10 NM_020601 refGene chrX 67445347 + 149423 graph_last l 4 27 gtcctctttc 1016 0.00593120167865064 0 0 7 0 8 gtgcttataa 1017 0.00593120167865064 0.111111111111111 1 9 1 10 genomic chr9 38323781 - 0 unique_long l 119 145 gttatctgat 1018 0.00593120167865064 5.66666666666667 17 3 32 3 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 1019 0.00593120167865064 0 0 7 0 8 taaataaatg 1020 0.00593120167865064 0 0 7 0 8 NM_024456 refGene chr11 100379176 - 23873 graph_last l 76 292 taaccaatca 1021 0.00593120167865064 0.375 12 32 23 35 taagaagcag 1022 0.00593120167865064 0.111111111111111 1 9 1 10 AY057898 knownGene chr10 124793682 - 16432 graph_last 2 18 taccattaca 1023 0.00593120167865064 0.111111111111111 1 9 1 10 NM_052976 refGene chrX 88394495 - 150213 graph_last l 3 25 tcaaagccta 1024 0.00593120167865064 0 0 7 0 8 NM_027355 refGene chr16 32013542 + 52918 graph_last l 5 18 tcagaggcaa 1025 0.00593120167865064 0 0 7 0 8 tgaaaccgcg 1026 0.00593120167865064 0 0 7 0 8 NM_172681 refGene chr3 85751589 - 86328 graph_last 2 23 tgagggactg 1027 0.00593120167865064 0 0 7 0 8 AK015384 knownGene chr1 16230707 - 579 graph_second 0 3 tgatgctttc 1028 0.00593120167865064 0 0 7 0 8 NM_033320 refGene chr9 64431793 + 138411 graph_last 0 4 tgctgatggc 1029 0.00593120167865064 0 0 7 0 8 tggacatcct 1030 0.00593120167865064 0 0 7 0 8 NM_007905 refGene chr6 124242753 - 116773 graph_last l 4 28 tggctgttgc 1031 0.00593120167865064 0.111111111111111 1 9 1 10 AV007161 all_est chr5 34384558 - 101976 graph_last 0 3 tgtctctata 1032 0.00593120167865064 0 0 7 0 8 ttccagtctt 1033 0.00593120167865064 0 0 7 0 8 NM_029767 refGene chr7 3769905 - 118489 graph_last l 5 32 ttgacctcgc 1034 0.00593120167865064 0 0 7 0 8 cacaaaataa 1035 0.00599423610058301 0.2 3 15 6 17 NM_009836 refGene chr3 90467959 + 86658 graph_last 20 143 cacagaacca 1036 0.00599423610058301 0.2 3 15 6 17 NM_010911 refGene chr2 156770802 + 80726 graph_last 24 122 gccattggaa 1037 0.00599423610058301 0.2 3 15 6 17 NM_029810 refGene chr19 47024121 + 70244 graph_last l 46 157 acgcatctgt 1038 0.00600872061955557 0.357142857142857 10 28 19 31 NM_173784 refGene chr11 32416958 + 18750 graph_last l 10 58 gtgctggtaa 1039 0.00600872061955557 0.214285714285714 3 14 5 16 NM_023579 refGene chr14 114054037 + 44438 graph_last l 10 67 tctggcagtc 1040 0.00600872061955557 0.214285714285714 3 14 5 16 NM_013847 refGene chr15 80374806 + 48370 graph_last 21 67 tgtgtatatg 1041 0.00600872061955557 0.214285714285714 3 14 5 16 BQ550972 all_est chr14 33819801 - 40573 graph_second 0 46 aaactgactt 1042 0.00604791769820075 0.166666666666667 2 12 3 13 NM_007410 refGene chr3 142379543 + 89786 graph_last l 11 62 aactaggcaa 1043 0.00604791769820075 0.166666666666667 2 12 3 13 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 1044 0.00604791769820075 0.166666666666667 2 12 3 13 AK028183 knownGene chr2 30233775 + 73205 graph_last l 11 48 agggcctgtg 1045 0.00604791769820075 0.166666666666667 2 12 3 13 AK034974 all_mrna chr2 53183992 + 74573 graph_last 0 77 atgttaaaaa 1046 0.00604791769820075 0.166666666666667 2 12 3 13 NM_009861 refGene chr4 136099316 - 98237 graph_last l 16 71 attctttata 1047 0.00604791769820075 0.166666666666667 2 12 3 13 NM_133215 refGene chr11 87176620 + 22801 graph_last l 15 62 caatgtgctg 1048 0.00604791769820075 0.166666666666667 2 12 3 13 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 1049 0.00604791769820075 0.166666666666667 2 12 3 13 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 1050 0.00604791769820075 0.166666666666667 2 12 3 13 NM_178624 refGene chr9 116584101 + 141769 graph_last l 13 60 gcaccagcag 1051 0.00604791769820075 0.166666666666667 2 12 3 13 NM_012032 refGene chr2 164237246 + 81211 graph_second 8 58 gtgaaaaaaa 1052 0.00604791769820075 0.166666666666667 2 12 3 13 NM_009528 refGene chr15 87202791 - 49042 graph_last l 6 83 tccttgaagt 1053 0.00604791769820075 0.166666666666667 2 12 3 13 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 1054 0.00604791769820075 0.166666666666667 2 12 3 13 NM_011218 refGene chr17 56341026 + 60237 graph_last l 10 61 tgggaaagat 1055 0.00604791769820075 0.166666666666667 2 12 3 13 ttgagaatga 1056 0.00604791769820075 0.166666666666667 2 12 3 13 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 1057 0.00605533766069043 2.64285714285714 37 14 71 16 NM_027350 refGene chr18 64667346 + 65455 graph_last l 173 288 ccgtgtgttc 1058 0.00613078904687488 2.81818181818182 31 11 60 12 NM_198894 refGene chr11 75988055 - 21730 graph_last l 94 280 tgagagggaa 1059 0.0064908577646491 0.393939393939394 13 33 26 37 genomic chr7 114715612 + 0 unique_long l 15 27 aatcagacct 1060 0.00652391719761374 Inf 9 0 18 0 NM_172563 refGene chr11 89923502 - 22996 graph_last l 17 30 accagaatat 1061 0.00652391719761374 Inf 9 0 18 0 NM_024495 refGene chr3 15111673 + 83194 graph_last l 63 134 agacaaactg 1062 0.00652391719761374 Inf 9 0 18 0 agttacttat 1063 0.00652391719761374 Inf 9 0 18 0 atagtgtaaa 1064 0.00652391719761374 Inf 9 0 18 0 BQ175143 all_est chr4 56709743 - 93445 graph_last l 30 56 atttgaaaat 1065 0.00652391719761374 Inf 9 0 18 0 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 1066 0.00652391719761374 Inf 9 0 18 0 genomic chr4 136999969 + 0 unique_long l 13 41 cctatacgtc 1067 0.00652391719761374 Inf 9 0 18 0 gacacgggag 1068 0.00652391719761374 Inf 9 0 18 0 AK129267 knownGene chr18_random 12235074 + 67016 graph_last l 26 49 ggaacaggag 1069 0.00652391719761374 Inf 9 0 18 0 ggggcacctg 1070 0.00652391719761374 Inf 9 0 18 0 genomic chr3 33848407 - 0 unique_long l 19 30 tcactgtcag 1071 0.00652391719761374 Inf 9 0 18 0 genomic chr18 36478939 + 0 unique_long l 36 52 tgctttataa 1072 0.00652391719761374 Inf 9 0 18 0 genomic chr13 90093357 - 0 unique_long l 19 33 ttaggtgagg 1073 0.00652391719761374 Inf 9 0 18 0 ttctggtttg 1074 0.00652391719761374 Inf 9 0 18 0 tttttaagca 1075 0.00652391719761374 Inf 9 0 18 0 tacacacctg 1076 0.00655298908209308 4.5 18 4 35 4 NM_028217 refGene chr16 33892019 - 53134 graph_last l 34 78 actgagattt 1077 0.00687345417638313 Inf 10 0 19 0 genomic chr3 90896443 + 0 unique_long l 22 40 atcttactac 1078 0.00687345417638313 Inf 10 0 19 0 NM_028224 refGene chr15 101529366 + 49935 graph_last l 37 211 cacccggcca 1079 0.00687345417638313 Inf 10 0 19 0 genomic chr10 6761017 - 0 unique_long l 27 32 cctcatttcc 1080 0.00687345417638313 Inf 10 0 19 0 NM_008614 refGene chr9 122556298 + 142162 graph_last b 88 767 cgcagcgttg 1081 0.00687345417638313 Inf 10 0 19 0 BQ178924 all_est chr13 51168087 - 34869 graph_last l 37 82 gaactggcgg 1082 0.00687345417638313 Inf 10 0 19 0 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 1083 0.00687345417638313 Inf 10 0 19 0 NM_018880 refGene chr7 97743662 - 123901 graph_last l 45 78 gagggacgga 1084 0.00687345417638313 Inf 10 0 19 0 NM_025975 refGene chrX 8203954 - 147166 graph_last l 27 58 gcgttcacct 1085 0.00687345417638313 Inf 10 0 19 0 NM_021477 refGene chr16 6894748 + 51276 graph_last l 15 66 ggtcttcctg 1086 0.00687345417638313 Inf 10 0 19 0 gtagtttaca 1087 0.00687345417638313 Inf 10 0 19 0 NM_010731 refGene chr10 83522601 + 14167 graph_second l 29 88 gtgggatcga 1088 0.00687345417638313 Inf 10 0 19 0 NM_009115 refGene chr10 78400956 + 13741 graph_last l 78 132 tctgacctgc 1089 0.00687345417638313 Inf 10 0 19 0 AK083224 knownGene chr14 85652753 - 43463 graph_last 1 28 tgatgatgtt 1090 0.00687345417638313 Inf 10 0 19 0 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 1091 0.00687345417638313 Inf 10 0 19 0 AK031181 knownGene chr1 121155993 + 5562 graph_last l 26 100 gcaaatgtac 1092 0.00705338625291597 0.291666666666667 7 24 14 26 ggtcagtcgg 1093 0.00705338625291597 0.291666666666667 7 24 14 26 AK084022 knownGene chr11 60723328 - 20505 graph_last l 38 149 tgaacctgag 1094 0.00705338625291597 0.291666666666667 7 24 14 26 aagagtcttt 1095 0.0070598310553962 7 14 2 27 2 NM_031179 refGene chr1 56302543 - 2445 graph_last l 29 113 caaactgaag 1096 0.0070598310553962 7 14 2 27 2 NM_013874 refGene chr7 23389583 + 119824 graph_last l 36 114 gcggagcccc 1097 0.0070598310553962 7 14 2 27 2 NM_010091 refGene chr4 153972505 + 99821 graph_last l 49 88 tgccactgcc 1098 0.0070598310553962 7 14 2 27 2 attctgaaca 1099 0.00709826394098431 3.25 26 8 51 9 NM_025347 refGene chr7_random 37896422 - 127287 graph_last l 103 266 gccctggtgc 1100 0.00709826394098431 3.25 26 8 51 9 ccctgcagct 1101 0.00714305566235606 7 14 2 28 2 NM_181595 refGene chr6 4868718 + 110051 graph_last l 46 80 ggagaaacag 1102 0.00714305566235606 7 14 2 28 2 Z36397 all_est chr15_random 6842715 - 50572 graph_last l 180 379 tggacaagct 1103 0.0072072763485045 2.07692307692308 54 26 104 29 NM_198613 refGene chr7 13784132 + 119083 graph_last l 87 238 cagttcgatg 1104 0.00735751585052917 3.57142857142857 25 7 48 8 NM_008155 refGene chr7 27846456 - 120117 graph_second l 139 422 ggggctcagc 1105 0.00737829836403033 4.2 21 5 41 6 gtgatattta 1106 0.00752031522660846 3.83333333333333 23 6 45 7 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 1107 0.00752527683967862 12 12 1 23 1 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 1108 0.00752527683967862 12 12 1 23 1 NM_009964 refGene chr9 52793169 + 137579 graph_last l 59 106 gcttcatctc 1109 0.00752527683967862 12 12 1 23 1 tattaaatgt 1110 0.00752527683967862 4.4 22 5 42 6 cctgatcttt 1111 0.00754729339655171 0.466666666666667 21 45 41 50 gatgctgcca 1112 0.00766086809672234 0.235294117647059 4 17 8 19 taattttttt 1113 0.00766086809672234 0.235294117647059 4 17 8 19 tgcaataaaa 1114 0.00766086809672234 0.235294117647059 4 17 8 19 NM_133693 refGene chr7 24607291 - 119961 graph_last l 21 96 tggaaggacc 1115 0.00766086809672234 0.235294117647059 4 17 8 19 NM_021526 refGene chr2 62189433 + 75066 graph_last 19 96 tggatgtgct 1116 0.00766086809672234 0.235294117647059 4 17 8 19 aaccgtgaat 1117 0.00822287573208229 0.3 6 20 11 22 tcttctcaca 1118 0.00823838715055004 0.387096774193548 12 31 23 34 NM_010864 refGene chr9 77762942 + 139524 graph_last l 39 101 agtttttcac 1119 0.00868123840149973 5.33333333333333 16 3 31 3 NM_194052 refGene chr11 29640106 + 18552 graph_last 74 187 gccaaaatcc 1120 0.00868123840149973 5.33333333333333 16 3 31 3 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 1121 0.00887908175807474 2.5 35 14 67 15 NM_010890 refGene chr9 75258934 + 139403 graph_last l 4 62 aaaacatctc 1122 0.00897191817296622 0.25 4 16 7 18 NM_026467 refGene chr9 69425322 + 138888 graph_last l 20 143 cacagactgt 1123 0.00897191817296622 0.25 4 16 7 18 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 1124 0.00905226813484592 0.1 1 10 2 11 agctcttgta 1125 0.00905226813484592 0.1 1 10 2 11 agggtgcagt 1126 0.00905226813484592 0.1 1 10 2 11 NM_011789 refGene chr10 82662274 + 14076 graph_last l 7 43 cctaccagtt 1127 0.00905226813484592 0.1 1 10 2 11 gagtgattat 1128 0.00905226813484592 0.1 1 10 2 11 NM_023279 refGene chr8 125273626 - 134257 graph_last l 4 35 gagtgggggt 1129 0.00905226813484592 0.1 1 10 2 11 AK122429 knownGene chr8 80319227 + 131527 graph_last l 5 36 gtgtgatgct 1130 0.00905226813484592 0.1 1 10 2 11 NM_011035 refGene chr7 90025102 - 123245 graph_second 1 43 gttctccaaa 1131 0.00905226813484592 0.1 1 10 2 11 AK014046 knownGene chr11 62096350 - 20634 graph_last l 16 62 tctctgaggt 1132 0.00905226813484592 0.1 1 10 2 11 NM_009560 refGene chr7 21289064 + 119616 graph_last 3 40 tgtttgtaca 1133 0.00905226813484592 0.1 1 10 2 11 gaagtactat 1134 0.00959082256893077 3 27 9 53 10 tggaagaaac 1135 0.00959082256893077 3 27 9 53 10 NM_172266 refGene chr1 195567615 + 9722 graph_last l 17 43 aacgaacact 1136 0.0102471704049249 Inf 9 0 17 0 NM_023312 refGene chr8 70094469 - 130862 graph_last l 90 351 aaggatgtgc 1137 0.0102471704049249 3.8 19 5 37 5 AK009517 knownGene chr11 69352719 - 21062 graph_last l 16 28 acttcctcag 1138 0.0102471704049249 Inf 9 0 17 0 NM_199301 refGene chr7 132043018 - 125964 graph_last l 23 264 atgaaacttt 1139 0.0102471704049249 Inf 9 0 17 0 atgtgtgcaa 1140 0.0102471704049249 Inf 9 0 17 0 NM_016862 refGene chr19 55509561 - 70624 graph_last 1 73 cacacactca 1141 0.0102471704049249 Inf 9 0 17 0 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 1142 0.0102471704049249 Inf 9 0 17 0 ccattggttt 1143 0.0102471704049249 Inf 9 0 17 0 cctttagtcc 1144 0.0102471704049249 3.8 19 5 37 5 NM_177664 refGene chr3 120658581 - 88683 graph_last l 26 37 cggtattata 1145 0.0102471704049249 Inf 9 0 17 0 NM_009723 refGene chr6 115508288 - 116175 graph_last l 16 55 ctgtttgaac 1146 0.0102471704049249 Inf 9 0 17 0 cttctcttgt 1147 0.0102471704049249 Inf 9 0 17 0 NM_053272 refGene chr4 105446521 + 95749 graph_last l 15 34 gacctgctct 1148 0.0102471704049249 Inf 9 0 17 0 gatctgaccc 1149 0.0102471704049249 Inf 9 0 17 0 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 1150 0.0102471704049249 Inf 9 0 17 0 NM_030019 refGene chr15 90975517 - 49256 graph_last l 86 162 gtacagccct 1151 0.0102471704049249 3.8 19 5 37 5 gtacatactg 1152 0.0102471704049249 2.09090909090909 46 22 89 24 gtacttggct 1153 0.0102471704049249 Inf 9 0 17 0 gtctcttcac 1154 0.0102471704049249 3.8 19 5 37 5 gtgcctcaca 1155 0.0102471704049249 Inf 9 0 17 0 tagctcaggc 1156 0.0102471704049249 Inf 9 0 17 0 NM_133241 refGene chr15 90621058 - 49218 graph_last l 44 102 taggagcaaa 1157 0.0102471704049249 Inf 9 0 17 0 NM_153139 refGene chr11 54861387 + 20071 graph_last l 28 51 tcagagcttc 1158 0.0102471704049249 Inf 9 0 17 0 tctctaaaag 1159 0.0102471704049249 Inf 9 0 17 0 genomic chr2 167715885 - 0 unique_long l 23 39 tctgtctttt 1160 0.0102471704049249 Inf 9 0 17 0 tgtgcactgt 1161 0.0102471704049249 Inf 9 0 17 0 NM_172859 refGene chr2 144543036 - 79873 graph_last l 56 93 tgtgttataa 1162 0.0102471704049249 Inf 9 0 17 0 tttgaaactg 1163 0.0102471704049249 Inf 9 0 17 0 tgctgagatc 1164 0.0104991271507129 4.2 21 5 40 6 cgcacacaca 1165 0.0105031877267320 3.66666666666667 22 6 43 7 NM_010324 refGene chr19 43600476 - 69950 graph_last l 51 152 acatacaaat 1166 0.0105532811748533 6.5 13 2 26 2 NM_177274 refGene chr3 161475192 + 90591 graph_last l 51 77 agtatttatg 1167 0.0105532811748533 6.5 13 2 26 2 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 1168 0.0105532811748533 6.5 13 2 26 2 NM_198167 refGene chr17 45055011 - 59504 graph_last l 29 112 cgaggacagc 1169 0.0105532811748533 6.5 13 2 26 2 NM_153407 refGene chr15 102453833 + 50072 graph_last l 24 68 aagcactggt 1170 0.0106081882506698 0.214285714285714 3 14 5 15 AK129454 knownGene chr11 23472540 - 18292 graph_last l 15 56 gacaggcatt 1171 0.0106081882506698 0.214285714285714 3 14 5 15 tgtatgtctg 1172 0.0106081882506698 0.214285714285714 3 14 5 15 gagctgtaat 1173 0.0106224363965745 0.214285714285714 3 14 6 16 gcccaggctc 1174 0.0106224363965745 0.214285714285714 3 14 6 16 genomic chr13 54365790 + 0 unique_long l 16 52 tacaattgtc 1175 0.0106224363965745 0.214285714285714 3 14 6 16 tccaactcct 1176 0.0106224363965745 0.214285714285714 3 14 6 16 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 1177 0.0110375279249289 0.543859649122807 31 57 59 63 ccttgctcaa 1178 0.0112058040603310 1.56338028169014 111 71 215 79 NM_009786 refGene chr1 163743500 - 7720 graph_last b 19 109 acgcgaaaac 1179 0.0113361159190641 0.277777777777778 5 18 9 20 NM_028871 refGene chr4 135120062 + 98142 graph_last 23 100 taagatttca 1180 0.0113361159190641 0.277777777777778 5 18 9 20 ttcggtacat 1181 0.0113361159190641 0.277777777777778 5 18 9 20 tttgctacaa 1182 0.0113361159190641 0.447368421052632 17 38 33 42 tccactgtgc 1183 0.0116824439278991 2 52 26 101 29 BB042952 all_est chr17 27384834 - 58161 graph_last l 35 74 agcttccagc 1184 0.0118341004269505 11 11 1 22 1 NM_033474 refGene chr16 18012617 - 52029 graph_last l 28 66 caaaccacta 1185 0.0118341004269505 11 11 1 22 1 NM_022027 refGene chr10 4901435 - 9989 graph_last 23 32 catcaatggg 1186 0.0118341004269505 11 11 1 22 1 genomic chr7 93057142 + 0 unique_long l 31 142 ccgggctggc 1187 0.0118341004269505 11 11 1 22 1 AK051587 all_mrna chr3 121887645 + 88723 graph_second 0 86 ctctctcttg 1188 0.0118341004269505 0.153846153846154 2 13 4 14 NM_008568 refGene chr5 136636318 - 107939 graph_last l 5 49 ctgcactttt 1189 0.0118341004269505 0.153846153846154 2 13 4 14 ggagatgata 1190 0.0118341004269505 11 11 1 22 1 NM_028207 refGene chr11 101635110 - 24017 graph_last l 59 118 ggaggtcctg 1191 0.0118341004269505 11 11 1 22 1 gtgaaactac 1192 0.0118341004269505 0.153846153846154 2 13 4 14 NM_010496 refGene chr12 19542551 + 26650 graph_last l 4 68 gtgggaatag 1193 0.0118341004269505 0.153846153846154 2 13 4 14 NM_007920 refGene chr14 71047481 - 43051 graph_last l 15 61 taagaatagc 1194 0.0118341004269505 0.153846153846154 2 13 4 14 tcctgggacg 1195 0.0118341004269505 11 11 1 22 1 NM_029738 refGene chr16 3374181 + 51019 graph_last l 57 80 tgattttcat 1196 0.0118341004269505 11 11 1 22 1 tggtggaatg 1197 0.0118341004269505 11 11 1 22 1 NM_053092 refGene chr8 113687507 - 133540 graph_last 10 76 caactatggt 1198 0.0118906507447607 0.181818181818182 2 11 3 12 NM_008956 refGene chr10 82168653 - 14002 graph_last l 7 50 cacctcacca 1199 0.0118906507447607 0.181818181818182 2 11 3 12 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 1200 0.0118906507447607 0.181818181818182 2 11 3 12 NM_010315 refGene chr14 14746598 + 39376 graph_last l 7 37 cctttattct 1201 0.0118906507447607 0.181818181818182 2 11 3 12 NM_026543 refGene chr11 49858631 + 19656 graph_last l 3 30 ctctccggaa 1202 0.0118906507447607 0.181818181818182 2 11 3 12 NM_026156 refGene chr8 3586476 + 127592 graph_last 2 35 ctgtgggggg 1203 0.0118906507447607 0.181818181818182 2 11 3 12 NM_133679 refGene chr16 93125087 - 56032 graph_last 3 27 cttttgctat 1204 0.0118906507447607 0.181818181818182 2 11 3 12 gagaacacac 1205 0.0118906507447607 0.181818181818182 2 11 3 12 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 1206 0.0118906507447607 0.181818181818182 2 11 3 12 BG069541 all_est chr4 122403918 + 96951 graph_last 0 56 gtggttgaaa 1207 0.0118906507447607 0.181818181818182 2 11 3 12 genomic chr13 87774243 - 0 unique_long l 4 26 tatagtgtaa 1208 0.0118906507447607 0.181818181818182 2 11 3 12 tatatacata 1209 0.0118906507447607 0.181818181818182 2 11 3 12 tatctgtccc 1210 0.0118906507447607 0.181818181818182 2 11 3 12 NM_009308 refGene chr18 31774869 - 63593 graph_last l 13 28 ttgaatacag 1211 0.0118906507447607 0.181818181818182 2 11 3 12 NM_009156 refGene chr7 12912473 - 118959 graph_second l 9 95 acaggaagga 1212 0.0121937162799102 0.125 1 8 1 9 actataacca 1213 0.0121937162799102 0.125 1 8 1 9 actgtgtctt 1214 0.0121937162799102 0.125 1 8 1 9 NM_024222 refGene chr9 117615376 - 141880 graph_last l 6 31 agggaaataa 1215 0.0121937162799102 0.125 1 8 1 9 aggtggctta 1216 0.0121937162799102 0.125 1 8 1 9 NM_183321 refGene chr7 24520374 - 119945 graph_last 0 22 caacgttgga 1217 0.0121937162799102 0.125 1 8 1 9 NM_177784 refGene chr2 70126124 + 75495 graph_last 2 20 cgaaaggtaa 1218 0.0121937162799102 0.125 1 8 1 9 NM_025412 refGene chr15 77603606 - 48102 graph_last l 4 50 ctggcgtgag 1219 0.0121937162799102 0.125 1 8 1 9 gaaggaaaaa 1220 0.0121937162799102 0.125 1 8 1 9 NM_026242 refGene chr5 35157503 - 102027 graph_last 9 56 gagtcttcga 1221 0.0121937162799102 0.125 1 8 1 9 gattttatga 1222 0.0121937162799102 0.125 1 8 1 9 D21379 all_est chr7 19969295 + 119521 graph_last l 7 71 gcacctctta 1223 0.0121937162799102 0.125 1 8 1 9 gctgctgtgt 1224 0.0121937162799102 0.125 1 8 1 9 ggctccgggg 1225 0.0121937162799102 0.125 1 8 1 9 gtgaatagat 1226 0.0121937162799102 0.125 1 8 1 9 tcaagatgat 1227 0.0121937162799102 0.125 1 8 1 9 NM_031870 refGene chr3 157825403 - 90510 graph_last 0 22 tgaagaatac 1228 0.0121937162799102 0.125 1 8 1 9 NM_134014 refGene chr11 23195325 + 18254 graph_last l 9 30 tgcatatcat 1229 0.0121937162799102 0.125 1 8 1 9 NM_178628 refGene chr12 65856222 - 28595 graph_last 5 39 ttagaagtga 1230 0.0121937162799102 0.125 1 8 1 9 BM964406 all_est chr2 37842889 - 73820 graph_last l 9 47 ttgcatttct 1231 0.0121937162799102 0.125 1 8 1 9 BB871295 all_est chr14 56138477 + 42105 graph_last l 27 119 ggcagactgt 1232 0.0124657433479089 0.392857142857143 11 28 21 31 catcacacaa 1233 0.0125296426355461 5 15 3 29 3 gtggctaaca 1234 0.0125296426355461 5 15 3 29 3 AK019388 knownGene chr13 57917174 - 35327 graph_last l 70 248 caatagaatt 1235 0.0129608712150343 0.5 24 48 47 53 NM_013908 refGene chr2 25771883 + 72848 graph_last l 26 134 ctgcactcct 1236 0.0129810711121857 0.25 4 16 8 18 NM_019565 refGene chr12 112090750 + 31588 graph_last 1 28 aaaaaaacta 1237 0.0131078208678795 0 0 6 0 7 NM_011182 refGene chr5 142660068 + 108340 graph_last 0 13 aagaaatatc 1238 0.0131078208678795 0 0 6 0 7 NM_022885 refGene chr13 99234699 - 37436 graph_second 0 21 aataaaattg 1239 0.0131078208678795 0 0 6 0 7 NM_175930 refGene chr12 113767444 + 31667 graph_last 3 26 actctgctgt 1240 0.0131078208678795 0 0 6 0 7 NM_013735 refGene chr2 121465159 - 78588 graph_last 0 12 acttatacct 1241 0.0131078208678795 0 0 6 0 7 NM_133926 refGene chr6 115093840 - 116120 graph_last 0 36 agaggggttg 1242 0.0131078208678795 0 0 6 0 7 agcctaaaaa 1243 0.0131078208678795 0 0 6 0 7 agggacctcc 1244 0.0131078208678795 0 0 6 0 7 NM_145962 refGene chr11 35432419 - 18936 graph_second 2 16 attctaacac 1245 0.0131078208678795 0 0 6 0 7 caaatccaaa 1246 0.0131078208678795 0 0 6 0 7 caaatgttaa 1247 0.0131078208678795 0 0 6 0 7 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 1248 0.0131078208678795 0 0 6 0 7 caattgcagc 1249 0.0131078208678795 0 0 6 0 7 cacgaccatc 1250 0.0131078208678795 0 0 6 0 7 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 1251 0.0131078208678795 0 0 6 0 7 NM_009338 refGene chr17 13166480 - 57147 graph_last 6 30 cagttcaccc 1252 0.0131078208678795 0 0 6 0 7 NM_010064 refGene chr2 71604438 - 75596 graph_last l 11 32 cggggaggga 1253 0.0131078208678795 0 0 6 0 7 NM_010160 refGene chr2 6462406 + 71738 graph_second 1 9 cgtctgagaa 1254 0.0131078208678795 0 0 6 0 7 NM_080288 refGene chr13 20448883 + 33067 graph_last l 11 94 ctgtggaata 1255 0.0131078208678795 0 0 6 0 7 cttccgtgaa 1256 0.0131078208678795 0 0 6 0 7 gaaaaataac 1257 0.0131078208678795 0 0 6 0 7 AK037620 knownGene chr9 108751572 - 141143 graph_last 1 23 gcaaaaaaag 1258 0.0131078208678795 0 0 6 0 7 gcctcctggg 1259 0.0131078208678795 0 0 6 0 7 AK051474 knownGene chr17 45897175 - 59583 graph_last l 6 39 ggagagggga 1260 0.0131078208678795 0 0 6 0 7 NM_016916 refGene chr2 158187406 + 80890 graph_second l 6 21 ggagccagtg 1261 0.0131078208678795 0 0 6 0 7 ggcttgccag 1262 0.0131078208678795 0 0 6 0 7 gggaacttgg 1263 0.0131078208678795 0 0 6 0 7 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 1264 0.0131078208678795 0 0 6 0 7 ggtaaacaat 1265 0.0131078208678795 0 0 6 0 7 NM_009441 refGene chr16 96242864 - 56249 graph_last 3 24 gtaaccttag 1266 0.0131078208678795 0 0 6 0 7 gtggggttct 1267 0.0131078208678795 0 0 6 0 7 NM_172707 refGene chr5 30843174 + 101693 graph_last 2 7 gtgggtacat 1268 0.0131078208678795 0 0 6 0 7 gttgaaatta 1269 0.0131078208678795 0 0 6 0 7 NM_013691 refGene chr3 91452443 - 86787 graph_last 2 61 gttggagcag 1270 0.0131078208678795 0 0 6 0 7 NM_019802 refGene chr6 73476352 - 113867 graph_second 1 8 gtttcagcac 1271 0.0131078208678795 0 0 6 0 7 NM_019413 refGene chr16 74181707 + 55087 graph_last 1 29 taagaaacct 1272 0.0131078208678795 0 0 6 0 7 NM_023409 refGene chr12 80722857 - 29776 graph_last l 8 30 taagattgag 1273 0.0131078208678795 0 0 6 0 7 NM_007935 refGene chr18 6648598 + 62583 graph_last l 2 10 taatgccctg 1274 0.0131078208678795 0 0 6 0 7 NM_177364 refGene chr11 32326332 + 18741 graph_last 2 29 tagagactgt 1275 0.0131078208678795 0 0 6 0 7 tatatgacta 1276 0.0131078208678795 0 0 6 0 7 tcatttgctg 1277 0.0131078208678795 0 0 6 0 7 genomic chr13 55251078 - 0 unique_long l 6 26 tctgttaata 1278 0.0131078208678795 0 0 6 0 7 NM_026817 refGene chr15 91224721 + 49278 graph_last 2 10 tcttcttagt 1279 0.0131078208678795 0 0 6 0 7 BC056180 knownGene chrX 135911933 - 151953 graph_last 0 21 tgccaaatac 1280 0.0131078208678795 0 0 6 0 7 tgccacctga 1281 0.0131078208678795 0 0 6 0 7 NM_009846 refGene chr10 45182952 + 12083 graph_last 2 32 tgccaggcaa 1282 0.0131078208678795 0 0 6 0 7 ttaaagtaat 1283 0.0131078208678795 0 0 6 0 7 NM_053076 refGene chr19 7417652 + 67781 graph_last 3 15 ttacttagtg 1284 0.0131078208678795 0 0 6 0 7 NM_175549 refGene chr16 75033921 - 55150 graph_last 2 20 tttatacact 1285 0.0131078208678795 0 0 6 0 7 ttttaagtac 1286 0.0131078208678795 0 0 6 0 7 NM_007597 refGene chr11 49920151 - 19666 graph_last l 49 306 taacagttgt 1287 0.0131454936601992 0.375 9 24 17 27 tatctgtcta 1288 0.0131454936601992 0.375 9 24 17 27 NM_010723 refGene chr3 148114293 - 90070 graph_last l 41 232 acaaaggtta 1289 0.0134773862330506 0.387096774193548 12 31 24 34 NM_013928 refGene chr3 70232604 - 85733 graph_last l 56 76 tattttgact 1290 0.0135358387550134 4.25 17 4 33 4 NM_145979 refGene chr6 127056993 + 116948 graph_last l 54 136 tgcaggagct 1291 0.0135358387550134 4.25 17 4 33 4 gttgctgttt 1292 0.0141551010468361 3.8 19 5 36 5 NM_134469 refGene chr3 91299823 - 86769 graph_last 29 130 gaacttgcaa 1293 0.0142026494301230 0.266666666666667 4 15 7 17 gtatttcata 1294 0.0142541727373884 4 20 5 39 6 NM_018873 refGene chr11 97094789 - 23526 graph_last l 52 102 taagcacaga 1295 0.0142541727373884 4 20 5 39 6 NM_009955 refGene chr14 58531839 - 42295 graph_last l 66 213 tgtgtagcca 1296 0.0142541727373884 0.424242424242424 14 33 27 36 caagtcttcc 1297 0.0143682601538173 0.277777777777778 5 18 10 20 NM_013896 refGene chr12 67019406 - 28702 graph_last l 21 91 tatgagatag 1298 0.0143682601538173 0.277777777777778 5 18 10 20 NM_009983 refGene chr7 134433272 - 126175 graph_last l 270 537 cctcagcctg 1299 0.0149367373127025 2.35714285714286 33 14 64 15 tgtgaatgat 1300 0.0150090857315795 0.457142857142857 16 35 30 39 NM_025974 refGene chr9 122956983 + 142184 graph_last l 115 326 aaggcaaaga 1301 0.0151289151176722 0.459459459459459 17 37 33 41 NM_007567 refGene chr9 110731493 - 141341 graph_last l 39 78 accttgtgaa 1302 0.0152472291006179 6.5 13 2 25 2 NM_021548 refGene chr9 77597717 + 139504 graph_last l 35 63 actttcagtg 1303 0.0152472291006179 6.5 13 2 25 2 NM_008707 refGene chr11 102692517 + 24151 graph_last l 31 88 agcactgcag 1304 0.0152472291006179 6.5 13 2 25 2 NM_010585 refGene chr6 110248654 + 115887 graph_last l 39 60 atttcttttc 1305 0.0152472291006179 6.5 13 2 25 2 NM_153457 refGene chr12 68119077 + 28767 graph_last l 53 116 cacttttttt 1306 0.0152472291006179 6.5 13 2 25 2 tttgctttaa 1307 0.0155037763462063 0.3 6 20 12 22 genomic chr11 74745310 + 0 unique_long l 21 26 agtggtgaac 1308 0.0156646384949824 Inf 8 0 16 0 NM_016866 refGene chr2 68553403 - 75378 graph_second 0 34 atgtagttat 1309 0.0156646384949824 Inf 8 0 16 0 NM_009793 refGene chr18 33368672 + 63709 graph_last l 22 47 ctctgaagga 1310 0.0156646384949824 Inf 8 0 16 0 ctgggacagc 1311 0.0156646384949824 Inf 8 0 16 0 gagaaatcag 1312 0.0156646384949824 Inf 8 0 16 0 NM_008429 refGene chr1 176179918 - 8554 graph_last l 25 37 gagagactta 1313 0.0156646384949824 Inf 8 0 16 0 NM_183173 refGene chr11 53101835 - 19914 graph_last l 39 56 gagtatggct 1314 0.0156646384949824 Inf 8 0 16 0 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 1315 0.0156646384949824 Inf 8 0 16 0 NM_026066 refGene chr14 46025635 + 41337 graph_last l 32 88 gctgcagcgt 1316 0.0156646384949824 Inf 8 0 16 0 gcttttggag 1317 0.0156646384949824 Inf 8 0 16 0 NM_009946 refGene chr13 54162183 + 35031 graph_last l 15 34 gggaagatgc 1318 0.0156646384949824 Inf 8 0 16 0 NM_145501 refGene chr19 42171628 + 69870 graph_last l 19 39 gtggtagccc 1319 0.0156646384949824 Inf 8 0 16 0 NM_008792 refGene chr2 143886399 + 79800 graph_last l 24 41 tccaagaagc 1320 0.0156646384949824 Inf 8 0 16 0 NM_175752 refGene chr2 74005861 - 75776 graph_last l 17 24 tctaactcca 1321 0.0156646384949824 Inf 8 0 16 0 BB648977 all_est chr1 15883659 + 550 graph_last 1 51 tgctgcccca 1322 0.0156646384949824 Inf 8 0 16 0 NM_011123 refGene chrX 125410059 + 151562 graph_second l 76 114 tgttcttccc 1323 0.0156646384949824 Inf 8 0 16 0 NM_021282 refGene chr7 132782731 - 125997 graph_last 0 235 aacgaggaat 1324 0.0158564033645644 0.333333333333333 8 24 16 26 NM_023130 refGene chr2 155492314 + 80608 graph_last l 18 107 cattcttcct 1325 0.0158564033645644 0.318181818181818 7 22 14 24 gttgtgattt 1326 0.0158564033645644 0.333333333333333 8 24 16 26 ttgtaaaagg 1327 0.0158564033645644 0.333333333333333 8 24 16 26 NM_009990 refGene chr5 133317336 - 107613 graph_last l 20 94 ttcggacaat 1328 0.0173374716975123 0.294117647058824 5 17 9 19 NM_010160 refGene chr2 6463548 -