gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.count COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 1 0 0.0590551181102362 75 1270 139 1596 NM_007807 refGene chrX 7985921 - 147160 graph_last 0 12115 ataatacata 2 3.5491965791015e-200 Inf 489 0 902 0 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 3 8.78414720681578e-171 0.0657370517928287 33 502 60 631 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 4 2.04986983558082e-153 0.0217983651226158 8 367 15 461 tcggacgtac 5 1.12358158150522e-146 Inf 359 0 663 0 tgggttgtct 6 5.51181819743076e-97 0.14321608040201 57 398 105 500 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 7 7.9058786796442e-97 53 265 5 490 6 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 8 7.27434479710058e-94 238 238 1 439 1 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 9 1.49936205789652e-86 114.5 229 2 422 3 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 10 1.62624991922517e-79 9.35294117647059 318 34 587 43 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 11 1.20867183783682e-74 0.137583892617450 41 298 75 375 aggcagacag 12 1.08690310431057e-73 0.254273504273504 119 468 220 588 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 13 1.71463975425822e-73 Inf 183 0 337 0 NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 14 3.44135760410126e-69 177 177 1 327 1 aatgacctgg 15 1.45105110940206e-68 0.0236686390532544 4 169 8 212 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 16 1.74169961220746e-66 32.6666666666667 196 6 362 8 tgaccccggg 17 8.88827988087524e-65 0.154676258992806 43 278 79 349 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 18 1.10107476811417e-64 20.4 204 10 376 12 caaaacaggc 19 2.92962195101617e-58 77.5 155 2 286 2 cgccgccggc 20 1.31409631234475e-54 0.149122807017544 34 228 62 287 taaagaggcc 21 1.60221980398601e-51 0.112903225806452 21 186 38 234 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 22 3.00474109830809e-51 133 133 1 246 1 gccaagtgga 23 5.46052990351006e-51 0.155251141552511 34 219 62 275 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 24 1.99662958516760e-49 0.139303482587065 28 201 52 253 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 25 3.27035003551445e-49 25 150 6 276 7 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 26 3.36951529114861e-49 22.1428571428571 155 7 286 9 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 27 1.78537196250361e-45 0.01 1 100 1 126 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 28 3.25101773097313e-45 Inf 114 0 210 0 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 29 6.00409466743984e-44 42.3333333333333 127 3 234 4 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 30 8.48266229785488e-43 0.0105263157894737 1 95 1 119 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 31 1.02797515514866e-42 0.133720930232558 23 172 43 216 gtgaaactaa 32 5.76805750282053e-42 0.106666666666667 16 150 30 189 gtatttgcaa 33 5.25329786152978e-41 56 112 2 207 2 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 34 5.56045585434871e-41 58 116 2 214 3 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 35 7.35812396255276e-41 14.4 144 10 265 13 gctgccctcc 36 5.47521396141097e-40 Inf 101 0 187 0 ggatttggct 37 1.18371614770003e-38 0.211538461538462 44 208 81 262 ggcaagcccc 38 3.92140055843379e-37 0.243362831858407 55 226 101 284 genomic chr2 103005141 + 0 unique_long l 172 342 caggtgagcc 39 1.08562384965363e-36 98 98 1 180 1 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 40 1.62039286641735e-36 7.71428571428571 162 21 299 27 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 41 4.5708487022516e-36 50 100 2 185 2 gattccgtga 42 4.61703163796968e-36 0.212435233160622 41 193 75 243 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 43 1.26653898127116e-35 0.0120481927710843 1 83 2 104 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 44 5.21202526060556e-35 0 0 75 0 94 aggaaggcgg 45 7.74760401632704e-35 0.172839506172839 28 162 52 204 tagatatagg 46 8.0017252487504e-34 5.13513513513514 190 37 350 47 ccccagccag 47 1.02787984719809e-33 0.196531791907514 34 173 63 217 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 48 4.37920561938857e-33 0 0 71 0 89 aggtcgggtg 49 1.75645700376929e-32 0.177631578947368 27 152 49 191 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 50 5.17689316371647e-32 86 86 1 159 1 tggatcagtc 51 5.69032674592267e-31 0.209580838323353 35 167 65 210 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 52 7.4781837101904e-31 11.6 116 10 215 13 atactgacat 53 8.2481601701502e-31 Inf 79 0 145 0 NM_023051 refGene chr4 147761803 + 99301 graph_last l 204 510 tcctgtcccc 54 1.10950169674797e-30 11.4 114 10 210 12 gttgctgaga 55 3.71887049896832e-30 0.184931506849315 27 146 49 183 tccctgtagt 56 4.53957408650823e-30 Inf 77 0 142 0 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 57 6.93931534002878e-30 0.0147058823529412 1 68 1 85 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 58 7.05604570116588e-30 0.0273972602739726 2 73 3 92 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 59 1.65111637459824e-29 9.75 117 12 216 15 gtctgctgat 60 1.74478872286404e-29 0.139344262295082 17 122 32 153 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 61 3.80309419738358e-29 0.0151515151515152 1 66 1 83 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 62 3.80309419738358e-29 0.0151515151515152 1 66 1 83 tgtactcaat 63 3.97138457731103e-29 0.112149532710280 12 107 22 134 ctgaacatct 64 4.02846508836374e-29 0.125 14 112 26 141 ttggtgaagg 65 8.12125464563052e-29 0.386581469648562 121 313 223 393 genomic chr4 137235203 - 0 unique_long l 168 283 tcacatccaa 66 1.20223347423908e-28 77 77 1 143 1 gggttggccg 67 1.36668832582895e-28 40.5 81 2 149 2 gtgacctggc 68 3.86252085648524e-28 76 76 1 141 1 X57780 knownGene chrM 119 + 142531 graph_second l 3651 6052 caaacctcca 69 7.28058788546484e-28 Inf 72 0 132 0 cccttcttct 70 1.49502820525599e-27 0.163934426229508 20 122 36 153 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 71 2.06575828770857e-27 39 78 2 144 2 cagcatcacc 72 5.01672084822348e-26 0.0416666666666667 3 72 6 90 cctttgtgac 73 5.28328572943632e-26 8.91666666666667 107 12 198 15 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 74 1.99260261520768e-25 69 69 1 128 1 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 75 3.39618965051374e-25 36.5 73 2 134 2 tactcattat 76 1.81504387964919e-24 10.4444444444444 94 9 174 11 cgctggttcc 77 4.13164566328414e-24 0.171171171171171 19 111 35 140 ccttgctcaa 78 4.24771582753155e-24 7 112 16 206 20 gcagggtggg 79 4.56679786521763e-24 0.0579710144927536 4 69 7 87 tctggacgcg 80 4.93467449682985e-24 0.0172413793103448 1 58 2 73 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 81 6.71852870132781e-24 0 0 52 0 65 ccctgggttc 82 4.41694405006525e-23 0.251700680272109 37 147 69 185 aacaatttgg 83 5.34832319783662e-23 0.248275862068966 36 145 67 182 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 84 5.34832319783662e-23 33.5 67 2 124 2 agaaggaggt 85 5.39077088023614e-23 0.284848484848485 47 165 86 207 gatgtggctg 86 1.63890966192100e-22 0.154639175257732 15 97 27 122 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 87 1.63890966192100e-22 0.0350877192982456 2 57 3 72 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 88 1.71790982067653e-22 10.75 86 8 159 10 aaggtggaag 89 3.71394787122699e-22 0.161616161616162 16 99 29 124 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 90 6.33054602453953e-22 0.127906976744186 11 86 20 108 tgactgggag 91 6.58198687651337e-22 Inf 57 0 105 0 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 92 7.55793180684089e-22 0.0344827586206897 2 58 4 73 tgtgtgaggt 93 8.61834522700667e-22 0.0357142857142857 2 56 3 70 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 94 2.48228328903111e-21 31.5 63 2 116 2 aagaggcaag 95 2.73292644178997e-21 0.129411764705882 11 85 21 107 gcacaacttg 96 2.92132414732813e-21 0.329670329670330 60 182 110 229 gtgctgaata 97 3.13986007356554e-21 0 0 46 0 58 tgcccagtgc 98 3.94445308973197e-21 7.30769230769231 95 13 175 16 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 99 4.35173913928579e-21 0.05 3 60 6 76 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 100 4.69172329169631e-21 32.5 65 2 120 3 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 101 5.628440972193e-21 14.6 73 5 134 6 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 102 7.9830931560236e-21 3.03174603174603 191 63 353 79 gtgttaacca 103 1.60764219065725e-20 0.1 7 70 12 88 NM_007687 refGene chr19 5351164 + 67562 graph_last 686 2388 gaagcaggac 104 2.76067546079915e-20 0.425287356321839 111 261 205 328 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 105 5.38454341118812e-20 6.1875 99 16 183 20 aaaaaaaaaa 106 1.71050818785752e-19 0.441947565543071 118 267 217 336 agcagtcccc 107 5.88910564532457e-19 Inf 49 0 91 0 NM_174998 refGene chr4 122151861 + 96906 graph_last l 199 320 ctgcttctaa 108 5.88910564532457e-19 Inf 49 0 91 0 gtaagcaaaa 109 6.48532333705118e-19 0.189473684210526 18 95 34 120 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 110 7.80235739234331e-19 11.5 69 6 128 7 tattggctct 111 9.48705719811773e-19 4.09677419354839 127 31 234 39 cctttgagat 112 9.8049973326588e-19 0.0833333333333333 5 60 9 76 NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 113 1.43327908899218e-18 11.8333333333333 71 6 131 8 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 114 1.51692715886025e-18 0.247863247863248 29 117 54 147 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 115 1.92403906251801e-18 0.172413793103448 15 87 28 109 ggtgagcctg 116 2.07477792992737e-18 0.208333333333333 20 96 36 121 taagggaaat 117 2.72288167956411e-18 6.28571428571429 88 14 163 17 NM_008740 refGene chr11 103486744 - 24251 graph_last l 109 193 ctaacagctg 118 4.13414064927632e-18 51 51 1 94 1 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 119 5.20333839631394e-18 3.4390243902439 141 41 261 51 tgtgccaagt 120 6.36848628016399e-18 0.191011235955056 17 89 31 112 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 121 6.94352879044174e-18 9.125 73 8 135 10 atcctggtaa 122 7.0319294056403e-18 10.1428571428571 71 7 131 9 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 123 1.11752400803083e-17 9.125 73 8 134 10 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 124 1.80066400169070e-17 2.55555555555556 207 81 382 102 NM_009692 refGene chr9 47988814 + 137297 graph_last 0 1015 gctttcttac 125 1.80066400169070e-17 Inf 46 0 84 0 gggtttttat 126 2.30076382646466e-17 0.146666666666667 11 75 21 94 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 127 2.86097939714992e-17 26 52 2 96 2 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 128 3.52736749796172e-17 49 49 1 90 1 gcaataaatg 129 3.81673408324268e-17 0.195402298850575 17 87 31 109 caccaccgtt 130 5.06184323254089e-17 0.221052631578947 21 95 38 119 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 131 5.06184323254089e-17 27.5 55 2 101 3 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 132 9.09960970239031e-17 27 54 2 100 3 accaatgaac 133 9.09960970239031e-17 Inf 44 0 81 0 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 134 9.66183052300118e-17 0.025 1 40 1 50 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 135 9.7824749145586e-17 0.0444444444444444 2 45 3 56 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 136 2.38814666875578e-16 10.8333333333333 65 6 120 8 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 137 3.94626176814164e-16 0.451063829787234 106 235 196 295 aaataaagat 138 4.24512844804286e-16 24.5 49 2 91 2 gcccgggaat 139 5.57172357857296e-16 0.463114754098361 113 244 209 307 caaaaataaa 140 5.91881336975693e-16 4.54545454545455 100 22 184 28 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 141 6.31729862428633e-16 0.231578947368421 22 95 41 119 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 142 7.78266568807797e-16 14 56 4 104 5 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 143 7.78266568807797e-16 14 56 4 104 5 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 144 1.27455967948398e-15 0.0270270270270270 1 37 1 47 atagcagcac 145 1.53244501007971e-15 5.11764705882353 87 17 160 21 tcccccacac 146 1.71822213191957e-15 44 44 1 82 1 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 147 3.02601275649860e-15 44 44 1 81 1 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 148 3.79548603180831e-15 23.5 47 2 86 2 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 149 4.79389727098705e-15 0.244680851063830 23 94 43 118 agagcgaagt 150 1.16039724411114e-14 0.271844660194175 28 103 52 129 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 151 1.43318550364985e-14 0.05 2 40 3 50 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 152 1.73948181206369e-14 0.15625 10 64 18 80 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 153 5.0566218808639e-14 Inf 37 0 69 0 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 154 5.0566218808639e-14 7.75 62 8 115 10 cccacaagct 155 5.64008747608323e-14 0 0 31 0 39 attctccagt 156 6.72027686259471e-14 0.275510204081633 27 98 50 123 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 157 7.43404005129759e-14 0.132075471698113 7 53 12 67 tatttgcaaa 158 7.43404005129759e-14 0.0526315789473684 2 38 3 48 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 159 8.46264075721548e-14 0.0888888888888889 4 45 7 57 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 160 8.70925211039964e-14 40 40 1 74 1 NM_016852 refGene chr11 115584466 - 25162 graph_last l 127 187 tctgtcccgc 161 9.4103169385496e-14 23 46 2 85 3 gatgacacca 162 1.15141335163028e-13 0.29 29 100 53 126 gcttttgtta 163 1.24649357336409e-13 16 48 3 89 4 atccgaaaga 164 1.26400539438632e-13 0.25 22 88 41 110 taatatttaa 165 1.55563471509080e-13 Inf 36 0 66 0 ttttatgttt 166 1.5731066038118e-13 0.247058823529412 21 85 39 107 ctagtctttg 167 1.79945405397377e-13 0.424418604651163 73 172 134 216 NM_172882 refGene chr5 101135739 - 105200 graph_last 0 4542 atgactgata 168 2.65546660410758e-13 Inf 35 0 65 0 gtagtggaag 169 3.22094920974786e-13 5.75 69 12 127 15 cacaaacggt 170 3.54528494514819e-13 0.381294964028777 53 139 97 175 ggcttcggtc 171 5.83237920537347e-13 0.532374100719424 148 278 274 350 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 172 7.65016437744085e-13 0 0 29 0 36 taaaaagaaa 173 8.77312713623761e-13 20.5 41 2 75 2 cacacacaca 174 1.02697014594344e-12 6 66 11 121 14 tcctgaaata 175 1.14506226553009e-12 9 54 6 100 8 ttcagctcga 176 1.46191217619699e-12 0.1875 12 64 23 81 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 177 2.70715006074514e-12 0.0540540540540541 2 37 4 46 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 178 2.86429325463132e-12 0.0333333333333333 1 30 1 38 tttttaatgt 179 2.86683191516046e-12 0.253164556962025 20 79 37 99 ggaagccact 180 3.16684642339840e-12 0.39568345323741 55 139 102 175 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 181 3.65040852706851e-12 0.111111111111111 5 45 9 56 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 182 4.54244215823356e-12 Inf 33 0 60 0 cagaacccac 183 4.54244215823356e-12 0.212121212121212 14 66 26 83 ggaaaggcaa 184 4.76246634863627e-12 19.5 39 2 72 2 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 185 4.83071846437002e-12 14.6666666666667 44 3 81 4 gggaaggcgg 186 4.9472451354981e-12 0.353982300884956 40 113 73 142 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 187 5.97204690819776e-12 0.03125 1 32 2 40 cctgatcttt 188 6.70637904622181e-12 0.277108433734940 23 83 42 104 ctattaaaag 189 8.21658368564024e-12 Inf 32 0 59 0 acgctgaata 190 1.03686466151362e-11 0 0 26 0 33 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 191 1.03686466151362e-11 0 0 26 0 33 NM_009790 refGene chr12 95767982 + 30604 graph_last l 461 1256 acaaacttag 192 1.04785900708311e-11 2.54545454545455 140 55 258 69 gcagttgtcc 193 1.34416579594490e-11 8.5 51 6 94 8 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 194 1.42007576930299e-11 Inf 31 0 57 0 ttccagcctt 195 1.84228071860527e-11 3.44444444444444 93 27 171 34 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 196 1.86604407229741e-11 7.57142857142857 53 7 97 9 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 197 2.0039760993961e-11 3.73913043478261 86 23 158 29 NM_177639 refGene chr17 71233584 + 60910 graph_last l 51 90 cattactgca 198 2.41910474448456e-11 Inf 30 0 56 0 caaatccaaa 199 2.44490912608344e-11 0 0 25 0 32 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 200 2.44490912608344e-11 0 0 25 0 32 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 201 2.65563590470801e-11 4.05263157894737 77 19 143 24 gtgaccgaag 202 2.75663095362948e-11 0.192982456140351 11 57 20 72 ctgctatccg 203 3.44413414292696e-11 0.25 18 72 33 90 ctgtaggtga 204 4.48527542335121e-11 0.352380952380952 37 105 68 132 gccttccaat 205 5.02566447855812e-11 0.318681318681319 29 91 53 114 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 206 5.83218002823599e-11 0 0 25 0 31 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 207 5.83218002823599e-11 0 0 25 0 31 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 208 6.22202141649755e-11 13.6666666666667 41 3 75 4 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 209 7.08705028144877e-11 Inf 29 0 54 0 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 210 7.08705028144877e-11 Inf 29 0 54 0 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 211 8.66780576822523e-11 0.196428571428571 11 56 21 71 cctttatttc 212 1.11382780063631e-10 17.5 35 2 65 2 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 213 1.11382780063631e-10 17.5 35 2 65 2 ggatggggag 214 1.19774416312416e-10 0.263888888888889 19 72 35 90 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 215 1.19774416312416e-10 33 33 1 60 1 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 216 1.37997112682134e-10 0 0 24 0 30 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 217 1.55986764776346e-10 0.0833333333333333 3 36 6 45 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 218 1.55986764776346e-10 0.0344827586206897 1 29 2 36 NM_177407 refGene chr18 61115520 + 65252 graph_second l 54 149 ctccgtccaa 219 1.93876084619779e-10 31 31 1 58 1 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 220 1.94070463226709e-10 17.5 35 2 64 2 gaaaatgaga 221 2.38565597926153e-10 0.155555555555556 7 45 13 57 aatttcaaaa 222 2.42388594821786e-10 0.214285714285714 12 56 22 71 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 223 2.54365231952353e-10 5.5 55 10 101 12 attgtttatg 224 2.75099197280462e-10 0.166666666666667 8 48 15 60 NM_144513 refGene chr12 105130773 + 31142 graph_last l 111 152 caaagagaac 225 3.30620241382495e-10 17 34 2 62 2 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 226 3.85022297355310e-10 7.83333333333333 47 6 86 8 ggatatgtgg 227 3.93294730407605e-10 Inf 28 0 51 0 gtaagcataa 228 3.93294730407605e-10 0.347368421052632 33 95 61 119 NM_029186 refGene chr19 46557251 + 70202 graph_last 0 457 ggccgctgct 229 4.74580861914993e-10 0.2 11 55 21 69 tgtaaaataa 230 5.1127994616291e-10 12.6666666666667 38 3 71 4 NM_019632 refGene chr2 149091252 - 80110 graph_last l 79 133 aacacttgta 231 7.23643856721117e-10 Inf 27 0 50 0 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 232 8.65156876576817e-10 0.1875 9 48 16 60 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 233 8.98678823505484e-10 0.170212765957447 8 47 15 59 NM_011221 refGene chr11 6368235 - 17495 graph_last l 75 170 gtttctcagg 234 9.22844553118704e-10 16.5 33 2 60 2 cctcctccag 235 1.17455517825510e-09 4.35714285714286 61 14 112 17 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 236 1.38151415229731e-09 9.75 39 4 72 5 tggcccaaat 237 1.50206642432624e-09 0.211538461538462 11 52 20 65 NM_009457 refGene chrX 19235820 + 147564 graph_last l 47 288 tagccaagcc 238 1.61137070431067e-09 0.183673469387755 9 49 17 61 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 239 1.86904226735758e-09 0 0 21 0 27 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 240 1.86904226735758e-09 0 0 21 0 27 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 241 2.0527370230591e-09 4.2 63 15 116 19 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 242 2.10034663355995e-09 4 64 16 119 20 NM_022029 refGene chr9 38324027 + 136533 graph_last l 92 152 ctgggcgcgt 243 2.12013728624195e-09 Inf 25 0 47 0 aggatctcag 244 2.21822760388028e-09 12 36 3 67 4 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 245 2.29422172053167e-09 0.0416666666666667 1 24 1 30 NM_182650 refGene chr6 51936886 - 112726 graph_last l 134 450 gtgtaataag 246 2.45881645158957e-09 0.3 21 70 38 88 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 247 2.47746960936818e-09 0.0714285714285714 2 28 3 35 cccccagcag 248 2.62204800672810e-09 15.5 31 2 58 2 tgtgtcaacc 249 2.99031811888196e-09 3.34782608695652 77 23 142 29 gcccccctct 250 3.22919853723007e-09 3.03571428571429 85 28 157 35 tacatacata 251 3.60298366711283e-09 Inf 25 0 46 0 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 252 3.76924392658501e-09 5.1 51 10 94 12 tcaaacttgg 253 3.92103290059077e-09 0.324675324675325 25 77 46 97 cctttaatcc 254 3.94847493296075e-09 1.80952380952381 228 126 421 159 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 255 4.32767524657979e-09 0.329113924050633 26 79 48 99 tgctgcacgt 256 4.97698600377443e-09 5.44444444444444 49 9 90 11 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 257 5.00791900608506e-09 2.08 156 75 288 94 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 258 5.38172203783301e-09 0.0740740740740741 2 27 3 34 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 259 5.38172203783301e-09 0.0740740740740741 2 27 3 34 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 260 5.55537061695797e-09 16.5 33 2 61 3 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 261 6.05064401393553e-09 11.6666666666667 35 3 65 4 tctaagtacg 262 6.09906371954492e-09 Inf 24 0 45 0 tgtaatacaa 263 6.09906371954492e-09 Inf 24 0 45 0 tagggcaatc 264 7.0131668833558e-09 0.309859154929577 22 71 40 89 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 265 7.0231155656177e-09 3.9375 63 16 116 20 NM_033264 refGene chr9 114792119 - 141710 graph_last l 116 153 ttacttgatc 266 8.68028665798608e-09 27 27 1 50 1 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 267 9.93670723250012e-09 0.138888888888889 5 36 9 45 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 268 1.02036332404223e-08 0 0 20 0 25 NM_011393 refGene chr2 103004726 + 77399 graph_last l 39 79 attgtttgca 269 1.07022221148713e-08 Inf 24 0 44 0 caataaactg 270 1.08903877127524e-08 3.11538461538462 81 26 149 33 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 271 1.18454661481321e-08 0.0454545454545455 1 22 1 28 cccacaaggt 272 1.23413759188337e-08 0.266666666666667 16 60 30 75 gcgaagctca 273 1.23413759188337e-08 0.357142857142857 30 84 56 106 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 274 1.35458437902707e-08 0.103448275862069 3 29 5 37 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 275 1.40524504323952e-08 4.07142857142857 57 14 105 17 genomic chr7 114718440 + 0 unique_long l 65 101 gctatttgcc 276 1.43705749204729e-08 27 27 1 49 1 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 277 1.51965622809766e-08 3.52631578947368 67 19 124 24 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 278 1.51965622809766e-08 3.52631578947368 67 19 124 24 tgggactcac 279 1.58352393255403e-08 5.75 46 8 84 10 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 280 1.60262198653820e-08 16 32 2 59 3 tgggtgtccc 281 1.60515316841543e-08 9 36 4 66 5 tcctgggatg 282 1.67208515927687e-08 11.3333333333333 34 3 62 4 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 283 1.68546783214100e-08 0.0967741935483871 3 31 6 39 atctactgtg 284 1.83743139401428e-08 Inf 23 0 43 0 NM_013509 refGene chr6 126683937 - 116901 graph_last l 77 103 tcccacagtt 285 1.83743139401428e-08 Inf 23 0 43 0 attctgaaca 286 2.14121767792990e-08 14.5 29 2 53 2 caaggtgaca 287 2.24142936715019e-08 0.413461538461538 43 104 80 131 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 288 2.27644403173946e-08 3.64705882352941 62 17 115 21 tgaaaccgcg 289 2.33638602199585e-08 0 0 19 0 24 AK032343 all_mrna chr7 71977154 + 122340 graph_last l 31 156 caggctgata 290 2.46848992668554e-08 0.08 2 25 3 32 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 291 2.46848992668554e-08 0.08 2 25 3 32 gaggagggtg 292 2.77179945776877e-08 0.103448275862069 3 29 5 36 gaaaaaaaaa 293 3.10440513007186e-08 0.24 12 50 22 63 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 294 3.54115947512248e-08 14 28 2 52 2 taatgtagac 295 4.0771836200867e-08 25 25 1 47 1 NM_013556 refGene chrX_random 10203554 + 153014 graph_last l 168 266 tttcagcagt 296 4.12418262798688e-08 8.75 35 4 64 5 caaatatgtt 297 4.27151784963926e-08 0.0434782608695652 1 23 2 29 ttcattataa 298 4.89579796910097e-08 0.397849462365591 37 93 69 117 ttaatattta 299 5.193643610586e-08 6 42 7 77 9 agagacacca 300 5.41525200523339e-08 0.08 2 25 3 31 ctgccccaca 301 5.51995383951993e-08 0 0 18 0 23 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 302 5.51995383951993e-08 0 0 18 0 23 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 303 5.80597639022817e-08 0.107142857142857 3 28 5 35 tgacaatttt 304 5.85801522950749e-08 0.0769230769230769 2 26 4 33 AK010983 knownGene chr8 71207329 + 131015 graph_last 2 82 gcactgcgca 305 5.9837548568178e-08 0.0476190476190476 1 21 1 26 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 306 6.6355016587357e-08 8.5 34 4 63 5 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 307 6.88781368865257e-08 25 25 1 46 1 attatatttt 308 6.88781368865257e-08 25 25 1 46 1 attttgtata 309 6.88781368865257e-08 25 25 1 46 1 NM_012053 refGene chr15 78134217 + 48155 graph_last 84 491 aatcctgtgg 310 7.14534796882837e-08 0.272727272727273 15 55 28 69 NM_009920 refGene chr19 4914237 - 67497 graph_last l 46 301 ggggcagccc 311 7.19313934269932e-08 0.222222222222222 10 45 19 57 attttcagtt 312 8.12978424138887e-08 0.214285714285714 9 42 16 53 NM_022656 refGene chr14 25710087 - 40123 graph_last l 90 323 ggtccaagag 313 8.12978424138887e-08 0.214285714285714 9 42 16 53 tacttgtgtt 314 8.80817124440515e-08 4.8 48 10 89 13 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 315 9.31667436180102e-08 0.0454545454545455 1 22 2 28 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 316 9.3940250256151e-08 7.2 36 5 66 6 NM_011861 refGene chr17 27340445 + 58149 graph_last l 49 144 aactggccgc 317 1.00285408268349e-07 Inf 21 0 39 0 NM_029879 refGene chr13 103551767 - 37712 graph_last l 48 91 caaatggact 318 1.00285408268349e-07 Inf 21 0 39 0 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 319 1.03673510102202e-07 6.66666666666667 40 6 73 8 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 320 1.07536516527236e-07 Inf 22 0 40 0 acttcagcca 321 1.13817704545859e-07 0.0833333333333333 2 24 3 30 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 322 1.13817704545859e-07 0.0833333333333333 2 24 3 30 gcctaatgta 323 1.14239878653946e-07 0.46551724137931 54 116 99 146 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 324 1.17214901752263e-07 0.277777777777778 15 54 28 68 NM_009142 refGene chr8 96065511 + 132522 graph_last l 78 152 ctccacagaa 325 1.17264289335755e-07 24 24 1 45 1 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 326 1.26260004095380e-07 0 0 18 0 22 NM_198886 refGene chr17 34557187 + 58892 graph_last 1 33 cctcaaagag 327 1.32824184296154e-07 0.05 1 20 1 25 gggtggggtg 328 1.53171232342895e-07 0.171428571428571 6 35 11 44 genomic chrM 16041 - 0 unique_long l 56 153 aataattagc 329 1.67879631065029e-07 Inf 21 0 38 0 tgtatacaca 330 1.67879631065029e-07 Inf 21 0 38 0 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 331 1.67879631065029e-07 Inf 21 0 38 0 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 332 1.73320513344425e-07 8.25 33 4 61 5 genomic chr10 130504840 - 0 unique_long l 55 103 gtggcaggcg 333 1.86273755115916e-07 14.5 29 2 53 3 aagaaaaaaa 334 1.90065208561148e-07 0.137931034482759 4 29 7 37 NM_026629 refGene chr6 55168250 + 112941 graph_last l 20 135 agagcaagga 335 1.90065208561148e-07 0.137931034482759 4 29 7 37 gccgcagtgg 336 2.0042252811103e-07 0.0476190476190476 1 21 2 27 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 337 2.0042252811103e-07 0.0476190476190476 1 21 2 27 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 338 2.0042252811103e-07 0.0476190476190476 1 21 2 27 ttggctgccc 339 2.25689858801492e-07 0.434343434343434 43 99 79 124 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 340 2.38813845866304e-07 0.316666666666667 19 60 35 76 NM_133195 refGene chr18 26103935 - 63468 graph_last l 96 185 aagagaacac 341 2.44218081734386e-07 6.8 34 5 63 6 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 342 2.46094250300531e-07 7 35 5 64 6 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 343 2.46094250300531e-07 7 35 5 64 6 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 344 2.50758013430464e-07 0.08 2 25 4 31 gaggctcaca 345 2.50758013430464e-07 0.08 2 25 4 31 cagtctctca 346 2.56725329726276e-07 0.352941176470588 24 68 44 86 X57780 knownGene chrM 2069 + 142531 graph_last l 436 2194 aacggctaaa 347 2.77935760698400e-07 Inf 20 0 37 0 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 348 2.77935760698400e-07 2.88 72 25 132 31 NM_146125 refGene chr2 120021247 + 78437 graph_last l 55 96 gtcctgcagg 349 2.77935760698400e-07 Inf 20 0 37 0 NM_020573 refGene chr18 13074281 - 62961 graph_last l 83 123 tattgcaagg 350 2.77935760698400e-07 Inf 20 0 37 0 tccctccctt 351 2.77935760698400e-07 Inf 20 0 37 0 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 352 2.77935760698400e-07 0.176470588235294 6 34 11 43 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 353 2.86285288348005e-07 0 0 17 0 21 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 354 2.86285288348005e-07 0 0 17 0 21 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 355 2.86285288348005e-07 0 0 17 0 21 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 356 2.89143380990315e-07 0.0526315789473684 1 19 1 24 gggggtgagg 357 2.89143380990315e-07 0.0526315789473684 1 19 1 24 tttgtgtctg 358 3.44672065171995e-07 23 23 1 42 1 gtgatattta 359 3.53240264392819e-07 23 23 1 43 1 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 360 4.33331089602741e-07 0.0476190476190476 1 21 2 26 gtacatactg 361 4.39458847243749e-07 4.6 46 10 84 13 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 362 4.45279288327159e-07 7.75 31 4 58 5 gctgtgggtc 363 4.77044284822037e-07 Inf 20 0 36 0 NM_178615 refGene chr17 15456505 - 57334 graph_last l 6 72 tgccaagttc 364 4.77044284822037e-07 Inf 20 0 36 0 NM_022417 refGene chr1 87790773 + 4273 graph_last l 184 778 gtagtggagc 365 5.0381468227284e-07 3.78571428571429 53 14 97 18 gctttgactg 366 5.0384598832258e-07 0.090909090909091 2 22 3 28 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 367 5.0384598832258e-07 0.090909090909091 2 22 3 28 gagcgttttg 368 5.04326084448118e-07 0.567415730337079 101 178 186 224 X57780 knownGene chrM 6672 - 142531 graph_second 152 213 tggtgtaagc 369 5.04326084448118e-07 10 30 3 55 4 ctgcatcgtt 370 5.11390305947615e-07 0.0833333333333333 2 24 4 30 NM_026959 refGene chr5 36556737 - 102112 graph_last l 19 123 ggccgtgtgc 371 5.11390305947615e-07 0.0833333333333333 2 24 4 30 NM_009156 refGene chr7 12912473 - 118959 graph_second l 9 95 acaggaagga 372 6.5486425478071e-07 0.0555555555555556 1 18 1 23 gatgcgcttg 373 6.5486425478071e-07 0.0555555555555556 1 18 1 23 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 374 6.5486425478071e-07 0.0555555555555556 1 18 1 23 aagatcaaga 375 6.63430324807588e-07 0.536912751677852 80 149 147 187 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 376 6.63812301487555e-07 0 0 16 0 20 NM_177876 refGene chr5 122967405 - 106929 graph_last l 8 69 ggagctccgg 377 6.63812301487555e-07 0 0 16 0 20 NM_013691 refGene chr3 91452443 - 86787 graph_last 2 61 gttggagcag 378 6.63812301487555e-07 0 0 16 0 20 acccctgacc 379 6.76113213375358e-07 0.12 3 25 5 32 gccaaaccaa 380 6.76113213375358e-07 0.12 3 25 5 32 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 381 8.07541298019035e-07 12.5 25 2 46 2 NM_009548 refGene chr11 61020026 - 20524 graph_last l 112 164 ccaaagaacc 382 8.07541298019035e-07 12.5 25 2 46 2 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 383 8.08431167756956e-07 Inf 19 0 35 0 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 384 8.08431167756956e-07 13.5 27 2 49 3 gccgttctta 385 8.08431167756956e-07 13.5 27 2 49 3 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 386 8.08431167756956e-07 Inf 19 0 35 0 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 387 8.08431167756956e-07 Inf 19 0 35 0 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 388 8.38607405920637e-07 0.194444444444444 7 36 13 45 NM_007933 refGene chr11 70223267 - 21160 graph_last l 58 307 ggctgggggc 389 9.01609009132665e-07 0.260869565217391 12 46 23 58 ttatcaagtg 390 9.01609009132665e-07 6 36 6 67 8 gagtctccct 391 9.04311503153824e-07 0.115384615384615 3 26 6 33 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 392 1.05462125050069e-06 0.0952380952380952 2 21 3 27 taataaataa 393 1.16812681141355e-06 5.66666666666667 34 6 63 7 BC052699 knownGene chr6 126842831 - 116923 graph_last l 137 519 aacccctgcc 394 1.17918307244196e-06 0.464646464646465 46 99 84 125 tggctcggtc 395 1.19523928885513e-06 0.601941747572815 124 206 229 259 NM_009790 refGene chr12 95768593 + 30604 graph_last l 111 171 cagcttgatg 396 1.31742728315166e-06 13 26 2 48 3 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 397 1.37231166586874e-06 0.222222222222222 8 36 14 45 BC047418 knownGene chrX 91466080 + 150344 graph_last 0 3086 aggacaaata 398 1.41504477356240e-06 Inf 18 0 34 0 ctctggaaag 399 1.41504477356240e-06 Inf 18 0 34 0 ctgtaatgat 400 1.41504477356240e-06 Inf 18 0 34 0 AK044090 knownGene chr9 72562933 - 139102 graph_last l 38 57 ggtctaagcg 401 1.41504477356240e-06 Inf 18 0 34 0 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 402 1.41504477356240e-06 Inf 18 0 34 0 tccactgtgc 403 1.41504477356240e-06 3.23529411764706 55 17 102 21 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 404 1.43615152557767e-06 0.0555555555555556 1 18 1 22 gaaaatatcc 405 1.48207531403429e-06 0.181818181818182 6 33 11 41 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 406 1.54331837335491e-06 21 21 1 39 1 NM_013681 refGene chr6 116901195 + 116249 graph_last l 100 219 ctggagatgt 407 1.54331837335491e-06 21 21 1 39 1 NM_007471 refGene chr16 86207437 + 55668 graph_last l 86 131 gcataagcaa 408 1.54331837335491e-06 21 21 1 39 1 gtgaaattat 409 1.60318748019865e-06 5.28571428571429 37 7 68 9 NM_013514 refGene chr14 62156344 - 42537 graph_last l 146 324 ctgggagggg 410 1.73576085093809e-06 7.5 30 4 55 5 gcccaggctc 411 1.77559034435016e-06 0.12 3 25 6 32 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 412 1.99243899694736e-06 0.0526315789473684 1 19 2 24 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 413 2.1743507168081e-06 0.090909090909091 2 22 4 28 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 414 2.1743507168081e-06 0.090909090909091 2 22 4 28 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 415 2.1743507168081e-06 0.090909090909091 2 22 4 28 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 416 2.27244630609660e-06 4 44 11 82 14 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 417 2.27913597751693e-06 3.46666666666667 52 15 96 19 gctccctctg 418 2.47547652782942e-06 0.172413793103448 5 29 9 37 NM_175692 refGene chr2 159010496 + 80939 graph_last l 52 68 ctactgaact 419 2.49489745586039e-06 Inf 18 0 33 0 NM_008963 refGene chr2 25734542 - 72846 graph_last 54 177 gccaccctct 420 2.49489745586039e-06 Inf 18 0 33 0 genomic chr9 38323781 - 0 unique_long l 119 145 gttatctgat 421 2.49489745586039e-06 Inf 18 0 33 0 tatgtcagta 422 2.49489745586039e-06 Inf 18 0 33 0 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 423 2.55580391484204e-06 0.1875 6 32 11 40 NM_009900 refGene chr16 20326531 + 52187 graph_last l 109 178 agtggctaat 424 2.59990500464975e-06 21 21 1 38 1 tatagatatg 425 2.59990500464975e-06 21 21 1 38 1 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 426 3.28184175023985e-06 2.45454545454545 81 33 149 42 NM_023850 refGene chr2 93230019 + 76987 graph_last l 75 134 ctggtacgtt 427 3.32230512040928e-06 11.5 23 2 42 2 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 428 3.46175477029122e-06 12.5 25 2 46 3 NM_133745 refGene chr10 35377401 + 11550 graph_last l 161 241 tatagctgta 429 3.46175477029122e-06 12.5 25 2 46 3 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 430 3.49805241183384e-06 0.12 3 25 6 31 gtcatagctg 431 3.54052417767273e-06 0 0 14 0 18 gttgaaatta 432 3.54052417767273e-06 0 0 14 0 18 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 433 4.31854108344274e-06 0.375 24 64 44 80 tgtaagtctg 434 4.41858059447679e-06 0.172413793103448 5 29 9 36 NM_145545 refGene chr3 146522536 + 90000 graph_second 0 2495 agcaattcaa 435 4.47937494054147e-06 Inf 17 0 32 0 gaaaggagac 436 4.47937494054147e-06 Inf 17 0 32 0 gaggagtggg 437 4.47937494054147e-06 Inf 17 0 32 0 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 438 4.47937494054147e-06 20 20 1 37 1 ggagagggta 439 4.47937494054147e-06 0.193548387096774 6 31 11 39 NM_016783 refGene chrX 27932232 - 147872 graph_last l 3 92 tagtgttttc 440 4.47937494054147e-06 20 20 1 37 1 tcggatatta 441 4.47937494054147e-06 Inf 17 0 32 0 aagaaaccag 442 4.62076075061931e-06 0.21875 7 32 12 40 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 443 4.73072566566456e-06 0.172413793103448 5 29 10 37 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 444 4.73072566566456e-06 0.130434782608696 3 23 5 29 atactgaagc 445 4.76664331243237e-06 0.345454545454545 19 55 35 69 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 446 5.68949731169086e-06 12 24 2 45 3 NM_025994 refGene chr4 140737608 - 98638 graph_last 75 162 tgcttgctca 447 5.81248365542858e-06 6 30 5 55 6 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 448 5.8324822663237e-06 5 35 7 65 9 BE632211 all_est chrUn_random 7803125 + 142887 graph_last 0 698 ctgcggcttc 449 6.12419720204535e-06 3.11764705882353 53 17 97 21 NM_023122 refGene chrX 154411688 + 152747 graph_last l 236 368 acagaattat 450 6.5777104922326e-06 4.625 37 8 68 10 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 451 6.85814855889568e-06 4.22222222222222 38 9 70 11 NM_198419 refGene chr13 43186420 + 34339 graph_last l 75 185 taaatccgaa 452 6.89295469428287e-06 5.16666666666667 31 6 58 7 ggggtacctg 453 7.11607643531067e-06 0.0625 1 16 1 20 tagagactgc 454 7.11607643531067e-06 0.285714285714286 12 42 22 53 NM_010064 refGene chr2 71555694 + 75596 graph_last l 5 69 tcggacaaaa 455 7.11607643531067e-06 0.0625 1 16 1 20 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 456 7.34451010101527e-06 7 28 4 52 5 NM_011035 refGene chr7 90025637 + 123245 graph_last l 246 410 ctcagaggtc 457 7.34462395527063e-06 3.53846153846154 46 13 84 16 tgacccttgc 458 7.49027613606617e-06 Inf 16 0 30 0 NM_013873 refGene chr15 85743411 + 48930 graph_second l 58 114 tgtggttcca 459 7.49027613606617e-06 Inf 16 0 30 0 ttttctatgc 460 7.49027613606617e-06 Inf 16 0 30 0 NM_025790 refGene chr13 24706246 - 33412 graph_last l 84 134 tcacctgcta 461 7.61648532858563e-06 20 20 1 36 1 NM_178795 refGene chr2 121579213 + 78592 graph_last l 63 153 tgtgactccc 462 7.61648532858563e-06 20 20 1 36 1 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 463 7.70900986142102e-06 0.2 6 30 11 38 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 464 7.70900986142102e-06 3.05555555555556 55 18 101 23 caccaccaca 465 7.98471433142199e-06 0.319148936170213 15 47 27 59 NM_015814 refGene chr7 104213348 - 124305 graph_last l 70 135 ggagcgctat 466 8.03451355078254e-06 Inf 17 0 31 0 NM_146073 refGene chr17 3537545 - 56573 graph_last 1 2114 tagttactta 467 8.03451355078254e-06 Inf 17 0 31 0 tctctgaccc 468 8.03451355078254e-06 Inf 17 0 31 0 gcacaggaga 469 8.05180187826633e-06 0 0 14 0 17 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 470 8.44240207766747e-06 8.66666666666667 26 3 48 4 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 471 9.06436729520562e-06 0.0555555555555556 1 18 2 22 NM_008131 refGene chr1 157363262 + 7351 graph_last l 47 91 tccggtaggc 472 9.11472364827504e-06 11 22 2 40 2 tctcccccac 473 9.11472364827504e-06 11 22 2 40 2 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 474 9.60109254124835e-06 4.5 36 8 66 10 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 475 9.81037560509854e-06 1.76744186046512 152 86 280 108 gggtaggggt 476 1.12593298126505e-05 6.75 27 4 50 5 ccagaacaga 477 1.13362149365894e-05 0.595375722543353 103 173 191 217 genomic chrM 4414 + 0 unique_long l 914 2465 aggaggactt 478 1.25385135340024e-05 Inf 16 0 29 0 NM_011246 refGene chr2 117550768 - 78248 graph_last l 87 114 aggttttgtt 479 1.25385135340024e-05 Inf 16 0 29 0 genomic chr12 105130081 + 0 unique_long l 81 156 gggatggcca 480 1.25385135340024e-05 Inf 16 0 29 0 ctgcagcggc 481 1.32822175141901e-05 19 19 1 35 1 ctgcagcacc 482 1.36684035885229e-05 8.33333333333333 25 3 46 4 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 483 1.37579373276701e-05 4.85714285714286 34 7 62 9 gctaaccacc 484 1.38090749792625e-05 5.8 29 5 53 6 NM_010376 refGene chr2 153447870 + 80390 graph_last l 18 113 gccgctaggc 485 1.49579602851377e-05 0.0952380952380952 2 21 4 26 NM_007756 refGene chr5 107494346 + 105667 graph_last l 178 537 tcagaggcct 486 1.52738050879140e-05 4.11111111111111 37 9 68 11 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 487 1.54477263897596e-05 11.5 23 2 42 3 NM_025282 refGene chr13 81768655 + 36483 graph_last l 45 76 taaatagaca 488 1.54477263897596e-05 11.5 23 2 42 3 NM_019498 refGene chr2 28483315 + 73055 graph_second l 49 149 aatagtttga 489 1.54996101784344e-05 11.5 23 2 43 3 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 490 1.54996101784344e-05 10.5 21 2 39 2 taaaccactg 491 1.54996101784344e-05 10.5 21 2 39 2 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 492 1.54996101784344e-05 10.5 21 2 39 2 AK010485 knownGene chr15_random 13961085 + 50719 graph_last 1 27 aattctctgt 493 1.87208631994149e-05 0 0 13 0 16 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 494 1.87208631994149e-05 0 0 13 0 16 gcctcccctt 495 1.87208631994149e-05 0 0 13 0 16 NM_133971 refGene chr8 12323570 - 127998 graph_last l 3 32 gcgtggcagg 496 1.87208631994149e-05 0 0 13 0 16 ggcgcggacc 497 1.87208631994149e-05 0 0 13 0 16 ggtaaacaat 498 1.87208631994149e-05 0 0 13 0 16 cagactgctc 499 1.99566114876206e-05 0.111111111111111 2 18 3 23 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 500 2.04491388960006e-05 3.2 48 15 89 19 ccctgatttt 501 2.09299753330547e-05 0.225806451612903 7 31 13 39 NM_013681 refGene chr6 116888565 + 116249 graph_last l 29 70 ccattgattg 502 2.10601422326042e-05 Inf 15 0 28 0 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 503 2.10601422326042e-05 Inf 15 0 28 0 NM_009224 refGene chr7 38518551 + 120795 graph_last l 31 36 tccctttgag 504 2.10601422326042e-05 Inf 15 0 28 0 NM_008447 refGene chr10 130505931 - 16675 graph_last l 32 56 ctgcaaaacc 505 2.15278663787938e-05 18 18 1 33 1 NM_172286 refGene chr8 121911265 - 133955 graph_last l 35 62 tcagggagcc 506 2.15278663787938e-05 18 18 1 33 1 cattttacat 507 2.30881123899755e-05 18 18 1 34 1 tacagtctac 508 2.30881123899755e-05 18 18 1 34 1 gaaatttaaa 509 2.43706804396501e-05 0.292682926829268 12 41 23 52 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 510 2.46658968226272e-05 0.192307692307692 5 26 9 33 NM_020591 refGene chr11 68913687 + 21005 graph_last l 52 114 catctgtggg 511 2.50861463067397e-05 10 20 2 37 2 NM_024218 refGene chr16 56401884 + 54408 graph_last 37 280 aaggtcgagc 512 2.55259579861268e-05 0.264705882352941 9 34 16 43 tgatatgagc 513 2.55333511011364e-05 2.75 55 20 102 25 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 514 2.74275345765509e-05 6.5 26 4 48 5 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 515 2.75117673590766e-05 0.1 2 20 4 25 NM_019402 refGene chr14 45986663 + 41330 graph_last 48 272 gtattcccct 516 2.78441775216989e-05 0.346938775510204 17 49 32 62 aagaaaatag 517 2.90378438309215e-05 0.3 12 40 22 50 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 518 3.09052593514822e-05 4.71428571428571 33 7 60 9 cgtctgtgga 519 3.19186766455749e-05 2.19444444444444 79 36 146 45 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 520 3.37072222544980e-05 5.6 28 5 51 6 cccactgcct 521 3.37072222544980e-05 8 24 3 44 4 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 522 3.37072222544980e-05 5.6 28 5 51 6 aatgtttctg 523 3.39946247089037e-05 0.0714285714285714 1 14 1 18 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 524 3.39946247089037e-05 0.142857142857143 3 21 5 26 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 525 3.39946247089037e-05 0.0714285714285714 1 14 1 18 NM_133699 refGene chr12 17676661 + 26516 graph_last l 29 105 cggccactgg 526 3.39946247089037e-05 0.0714285714285714 1 14 1 18 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 527 3.39946247089037e-05 0.0714285714285714 1 14 1 18 NM_011162 refGene chr2 92999933 - 76972 graph_last l 118 242 ccacctggaa 528 3.45036329200925e-05 3.7 37 10 68 12 NM_175752 refGene chr2 74005159 - 75776 graph_last l 74 98 gcttaatgta 529 3.51372916844472e-05 17 17 1 32 1 NM_029530 refGene chr2 136212325 + 79508 graph_last l 58 171 tgagttcgct 530 3.51372916844472e-05 17 17 1 32 1 cccattggag 531 3.54470758192908e-05 Inf 15 0 27 0 gccgaccccg 532 3.54470758192908e-05 Inf 15 0 27 0 NM_011170 refGene chr2 132079926 + 79291 graph_last l 42 75 taacttagca 533 3.54470758192908e-05 Inf 15 0 27 0 NM_020573 refGene chr18 13081721 - 62961 graph_last l 34 51 tggtcttttt 534 3.54470758192908e-05 Inf 15 0 27 0 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 535 3.76075348484045e-05 0.292682926829268 12 41 23 51 NM_010895 refGene chr11 97910831 - 23629 graph_last b 21 98 tacgaggagc 536 3.81183718095221e-05 0.241379310344828 7 29 12 37 NM_011100 refGene chr3 150651068 - 90234 graph_last l 38 103 cctaaaattc 537 4.00378049533649e-05 10 20 2 36 2 agaagtgttt 538 4.04100370116617e-05 0.0625 1 16 2 20 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 539 4.04100370116617e-05 0.111111111111111 2 18 3 22 NM_173437 refGene chr1 138358972 - 6521 graph_last l 2 51 gcaaggctca 540 4.04100370116617e-05 0.0625 1 16 2 20 gggcagaggt 541 4.04100370116617e-05 0.0625 1 16 2 20 gtcagttaaa 542 4.04100370116617e-05 0.111111111111111 2 18 3 22 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 543 4.16793036412758e-05 0.173913043478261 4 23 7 29 NM_178242 refGene chr5 141719479 + 108235 graph_last 1 19 agcctggcgg 544 4.17756114225538e-05 0 0 12 0 15 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 545 4.17756114225538e-05 0 0 12 0 15 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 546 4.17756114225538e-05 0 0 12 0 15 NM_008707 refGene chr11 102658151 - 24151 graph_last 1 40 ctccctgccc 547 4.17756114225538e-05 0 0 12 0 15 NM_013834 refGene chr8 22347179 + 128587 graph_last 2 40 ctttccctgc 548 4.17756114225538e-05 0 0 12 0 15 gacccccccc 549 4.17756114225538e-05 0 0 12 0 15 gctgcctaga 550 4.17756114225538e-05 0 0 12 0 15 NM_177188 refGene chr15_random 18412680 + 50810 graph_last 6 30 gcttgctgcc 551 4.17756114225538e-05 0 0 12 0 15 NM_016860 refGene chr19 46566407 - 70209 graph_last l 38 177 gactgcagtg 552 4.25468046882890e-05 0.185185185185185 5 27 10 34 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 553 4.42377225273028e-05 0.16 4 25 8 31 acagtgcctg 554 4.42377225273028e-05 0.16 4 25 8 31 tgaaataaac 555 4.49416111516684e-05 0.270270270270270 10 37 19 46 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 556 4.99265546760185e-05 3.88888888888889 35 9 64 11 gtcaaaaaaa 557 5.01088128021326e-05 0.105263157894737 2 19 4 24 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 558 5.01088128021326e-05 0.105263157894737 2 19 4 24 atgtctcaaa 559 5.90783068629101e-05 0.621301775147929 105 169 194 213 NM_010585 refGene chr6 110248654 + 115887 graph_last l 39 60 atttcttttc 560 6.06116704366777e-05 Inf 14 0 26 0 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 561 6.06116704366777e-05 Inf 14 0 26 0 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 562 6.06116704366777e-05 Inf 14 0 26 0 BC049262 knownGene chr10 101636709 + 15243 graph_last l 47 130 tgatggaagg 563 6.06116704366777e-05 10.5 21 2 39 3 genomic chr17 26602950 + 0 unique_long l 61 112 tttaataaac 564 6.06116704366777e-05 10.5 21 2 39 3 aagatgatat 565 6.4221839689462e-05 9.5 19 2 35 2 AK076321 knownGene chr9 61996920 + 138255 graph_last l 15 90 gtggagattg 566 6.4221839689462e-05 0.15 3 20 5 25 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 567 6.92210575811601e-05 4.42857142857143 31 7 58 9 gggtcaaagg 568 7.33590218263192e-05 0.192307692307692 5 26 10 33 ccagtgcctg 569 7.36540199969952e-05 0.0714285714285714 1 14 1 17 tcctgaaccc 570 7.36540199969952e-05 0.0714285714285714 1 14 1 17 ctatttcaaa 571 7.37910443031961e-05 3.6 36 10 66 12 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 572 7.42896615127465e-05 3.54545454545455 39 11 72 14 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 573 7.68434708160086e-05 0.181818181818182 4 22 7 28 tgtgtgagga 574 7.74136955298914e-05 0.166666666666667 4 24 8 30 NM_172290 refGene chr9 29662908 - 136058 graph_last l 87 145 aagtgtgaaa 575 8.23893662363677e-05 5.4 27 5 49 6 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 576 8.25399258418668e-05 0.117647058823529 2 17 3 21 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 577 8.25399258418668e-05 0.117647058823529 2 17 3 21 NM_134012 refGene chr11 93530498 + 23125 graph_last 3 46 gatgtgaaaa 578 8.5173276035206e-05 0.0666666666666667 1 15 2 19 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 579 8.5173276035206e-05 0.0666666666666667 1 15 2 19 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 580 9.57532022492178e-05 0.111111111111111 2 18 4 23 NM_010496 refGene chr12 19542551 + 26650 graph_last l 4 68 gtgggaatag 581 9.57532022492178e-05 0.111111111111111 2 18 4 23 NM_172266 refGene chr1 195572097 + 9722 graph_last l 75 143 ctgatgtcat 582 9.58966743911635e-05 16 16 1 30 1 AY255605 knownGene chr4_random 6506063 + 99997 graph_second l 31 67 ttgtcactca 583 9.58966743911635e-05 16 16 1 30 1 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 584 9.64817913397037e-05 0 0 11 0 14 cggagaccct 585 9.64817913397037e-05 0 0 11 0 14 NM_021399 refGene chr12 103477310 - 31002 graph_last l 5 29 ctatggaagg 586 9.64817913397037e-05 0 0 11 0 14 gattctccaa 587 9.64817913397037e-05 0 0 11 0 14 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 588 9.64817913397037e-05 0 0 11 0 14 NM_009846 refGene chr10 45182952 + 12083 graph_last 2 32 tgccaggcaa 589 9.64817913397037e-05 0 0 11 0 14 NM_080633 refGene chr15 83461809 + 48679 graph_last l 115 306 caactgtatt 590 9.67461756164286e-05 4.83333333333333 29 6 54 8 NM_011634 refGene chr9 110584487 + 141318 graph_last l 146 323 cctgtgggtc 591 9.67461756164286e-05 4.83333333333333 29 6 54 8 NM_145516 refGene chr1 35567557 + 1446 graph_last l 104 173 caccctctca 592 9.67812642616423e-05 10.5 21 2 38 3 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 593 9.67812642616423e-05 10.5 21 2 38 3 ataatggata 594 9.9080952129299e-05 0.305555555555556 11 36 20 45 genomic chr11 101636695 + 0 unique_long l 25 51 aaccagttct 595 0.000103729344219744 Inf 14 0 25 0 NM_015744 refGene chr15 56417904 + 47061 graph_last l 29 65 aagatgcaca 596 0.000103729344219744 Inf 14 0 25 0 NM_011129 refGene chr11 87150159 + 22798 graph_last l 63 154 acccggctag 597 0.000103729344219744 Inf 14 0 25 0 cttgcaatct 598 0.000103729344219744 Inf 14 0 25 0 NM_021324 refGene chr7 4002060 + 118502 graph_last l 77 162 gcaaagaaaa 599 0.000103729344219744 9 18 2 34 2 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 600 0.000103729344219744 Inf 14 0 25 0 BB627528 all_est chr5 149262208 + 108843 graph_last 0 51 gtctttccta 601 0.000103729344219744 Inf 14 0 25 0 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 602 0.000103729344219744 9 18 2 34 2 NM_183187 refGene chr14 3580574 - 38877 graph_last l 92 123 ttttacctaa 603 0.000103729344219744 Inf 14 0 25 0 NM_011029 refGene chr9 122506722 + 142160 graph_last 0 327 tgtcatctag 604 0.000106512594369447 3.6 36 10 67 13 ttgactttat 605 0.000106642933628663 2.08108108108108 77 37 143 46 gacattgatt 606 0.000109507832293914 4.125 33 8 60 10 ctaataaagc 607 0.000109712705409601 0.505747126436782 44 87 81 109 NM_183171 refGene chr9 37655139 + 136457 graph_last b 58 291 atcgggcgca 608 0.000125957501660257 0.297297297297297 11 37 21 46 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 609 0.000125957501660257 0.142857142857143 3 21 6 26 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 610 0.000131987908105660 7.33333333333333 22 3 41 4 NM_011655 refGene chr17 35501335 - 58992 graph_last l 23 98 ctcctcctgc 611 0.000132414794231444 0.173913043478261 4 23 8 29 NM_007393 refGene chr5 141627702 - 108227 graph_last l 10 73 gacgcgacca 612 0.000132414794231444 0.173913043478261 4 23 8 29 gccaagggtc 613 0.000137017432898485 0.5 40 80 74 101 NM_009836 refGene chr3 90467959 + 86658 graph_last 20 143 cacagaacca 614 0.000138657177947763 0.190476190476190 4 21 7 27 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 615 0.000138657177947763 0.190476190476190 4 21 7 27 gaagatgagc 616 0.000138657177947763 3.15384615384615 41 13 75 16 ggcgtcatcg 617 0.000138657177947763 0.190476190476190 4 21 7 27 NM_009871 refGene chr11 80051754 + 22184 graph_last l 45 226 ctgctatgaa 618 0.000139365303662319 0.275862068965517 8 29 14 37 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 619 0.000145876983209372 4.83333333333333 29 6 53 8 atgtactcgg 620 0.000157580494141414 0.0769230769230769 1 13 1 16 NM_027350 refGene chr18 64667346 + 65455 graph_last l 173 288 ccgtgtgttc 621 0.000157580494141414 3.875 31 8 58 10 tgctcgcaaa 622 0.000157580494141414 0.0769230769230769 1 13 1 16 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 623 0.000157580494141414 16 16 1 29 1 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 624 0.000157580494141414 16 16 1 29 1 ccatttgagc 625 0.000165356275579738 0.125 2 16 3 20 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 626 0.000167270900220888 6 24 4 44 5 ctgggcccag 627 0.000167270900220888 6 24 4 44 5 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 628 0.000169433376021238 9 18 2 33 2 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 629 0.000175198297905057 0.0714285714285714 1 14 2 18 BC052699 knownGene chr6 126842836 + 116923 graph_last l 9 54 ccgacgcccc 630 0.000175198297905057 0.0714285714285714 1 14 2 18 NM_009528 refGene chr15 87202791 - 49042 graph_last l 6 83 tccttgaagt 631 0.000175198297905057 0.0714285714285714 1 14 2 18 NM_010324 refGene chr19 43600476 - 69950 graph_last l 51 152 acatacaaat 632 0.000182223827537833 Inf 13 0 24 0 atttttaaaa 633 0.000182223827537833 Inf 13 0 24 0 NM_023348 refGene chr16 16883044 + 51909 graph_last l 69 88 cagtagataa 634 0.000182223827537833 Inf 13 0 24 0 NM_011309 refGene chr3 93204953 - 86984 graph_last l 63 93 cccattcggg 635 0.000182223827537833 Inf 13 0 24 0 NM_033264 refGene chr9 114798597 - 141710 graph_second l 24 54 ggacggcagt 636 0.000182223827537833 Inf 13 0 24 0 NM_010250 refGene chr11 41756133 - 19197 graph_last l 43 98 tctcactgta 637 0.000182223827537833 Inf 13 0 24 0 gtgggcgtgt 638 0.000190889139233253 0.588709677419355 73 124 135 156 NM_057171 refGene chr17 34807771 + 58931 graph_last l 21 121 cctgccaaga 639 0.000203313719727687 0.266666666666667 8 30 15 38 ccaggagagg 640 0.000207473918931390 0.2 5 25 10 31 NM_007471 refGene chr16 86207600 - 55668 graph_last l 75 198 tatctttgga 641 0.000211255681437960 7.33333333333333 22 3 40 4 aaggaaatgg 642 0.000214260753502953 0.415094339622642 22 53 41 67 U70442 knownGene chr2 153137906 + 80366 graph_last s 0 25 acgttttccg 643 0.000216181980153776 0 0 10 0 13 agcacacaat 644 0.000216181980153776 0 0 10 0 13 NM_176902 refGene chr11 115943906 + 25214 graph_last 2 15 gatggccaga 645 0.000216181980153776 0 0 10 0 13 AA139939 all_est chr3 90376105 - 86642 graph_last 0 39 gcgggggtgc 646 0.000216181980153776 0 0 10 0 13 NM_172659 refGene chr2 27289981 + 72975 graph_last l 7 38 ggcactgtcc 647 0.000216181980153776 0 0 10 0 13 gtgttttgaa 648 0.000216181980153776 0 0 10 0 13 tacacggagc 649 0.000216181980153776 0 0 10 0 13 aaggggggca 650 0.000223285969745615 0.15 3 20 6 25 ggggtggggg 651 0.000223285969745615 0.15 3 20 6 25 gggtgggaag 652 0.000228760150324868 0.275862068965517 8 29 14 36 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 653 0.000233270600569969 2.61111111111111 47 18 87 22 ctcgagtctc 654 0.000236889510886045 0.314285714285714 11 35 20 44 ggctgtcctg 655 0.000236889510886045 0.28125 9 32 17 40 NM_145544 refGene chr3 142849874 - 89852 graph_last l 101 164 taagtgaaaa 656 0.000252059003016682 10 20 2 36 3 NM_028392 refGene chr18 43302393 - 64388 graph_last l 21 102 acaggctcct 657 0.000252324249618546 0.190476190476190 4 21 7 26 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 658 0.000265575634914861 15 15 1 28 1 gggacctagg 659 0.00027575020897572 0.45 27 60 50 76 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 660 0.000278570108062627 8.5 17 2 32 2 NM_013928 refGene chr3 70232604 - 85733 graph_last l 56 76 tattttgact 661 0.000278570108062627 8.5 17 2 32 2 NM_008139 refGene chr19 16285368 + 68305 graph_last l 46 89 tgttactctc 662 0.000278570108062627 8.5 17 2 32 2 NM_011218 refGene chr17 56340786 - 60237 graph_last l 44 187 gaggacctgg 663 0.000287917376467165 0.3 9 30 16 38 caaaatacat 664 0.00030030142781186 2.47619047619048 52 21 96 26 NM_144859 refGene chr17 64375162 - 60598 graph_last l 61 136 ctttctcact 665 0.000312330680567219 4.33333333333333 26 6 48 7 NM_009964 refGene chr9 52793169 + 137579 graph_last l 59 106 gcttcatctc 666 0.000319469005086609 Inf 12 0 22 0 ggagatgata 667 0.000319469005086609 Inf 12 0 22 0 gtgctgccag 668 0.000319469005086609 Inf 12 0 22 0 tatcatcttt 669 0.000319469005086609 Inf 12 0 22 0 NM_030725 refGene chr2 93571606 + 76996 graph_last l 56 84 tctggttaca 670 0.000319469005086609 Inf 12 0 22 0 genomic chr9 72561130 - 0 unique_long l 39 57 tgacaagaca 671 0.000319469005086609 Inf 12 0 22 0 NM_029738 refGene chr16 3374181 + 51019 graph_last l 57 80 tgattttcat 672 0.000319469005086609 Inf 12 0 22 0 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 673 0.000319469005086609 Inf 12 0 22 0 tttattaaat 674 0.000319469005086609 Inf 12 0 22 0 NM_021548 refGene chr9 77597717 + 139504 graph_last l 35 63 actttcagtg 675 0.000320739162925243 Inf 12 0 23 0 NM_016744 refGene chr2 80199013 - 76137 graph_last l 25 33 atttggtcat 676 0.000320739162925243 Inf 12 0 23 0 genomic chr5 135848574 + 0 unique_long l 34 144 cgccctggct 677 0.000320739162925243 Inf 12 0 23 0 NM_178920 refGene chr15 55705037 + 47025 graph_last l 47 75 ctcagtgtgg 678 0.000320739162925243 Inf 12 0 23 0 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 679 0.000320739162925243 Inf 12 0 23 0 NM_172544 refGene chr12 85830976 + 30167 graph_last l 23 42 gtatgtttga 680 0.000320739162925243 Inf 12 0 23 0 tattaaatgt 681 0.000320739162925243 7 21 3 38 4 NM_008487 refGene chr3 90799038 + 86700 graph_last l 14 79 aatggatgca 682 0.000327195597588209 0.117647058823529 2 17 4 21 BC023037 knownGene chr11 69484983 + 21087 graph_last l 10 84 gggagggagt 683 0.000327195597588209 0.117647058823529 2 17 4 21 NM_010206 refGene chr8 24418477 + 128679 graph_last l 28 117 ggggagacgc 684 0.000327195597588209 0.117647058823529 2 17 4 21 NM_019479 refGene chr1 93328174 - 4687 graph_last l 3 42 ccgctgcgtg 685 0.000333095398888465 0.0833333333333333 1 12 1 15 D21379 all_est chr7 19969295 + 119521 graph_last l 7 71 gcacctctta 686 0.000333095398888465 0.0833333333333333 1 12 1 15 NM_009872 refGene chr1 76438520 + 3664 graph_last l 52 134 ctgggagttg 687 0.000333346574339786 7 21 3 39 4 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 688 0.000355862184121238 0.0714285714285714 1 14 2 17 aggtgctgag 689 0.000355862184121238 0.0714285714285714 1 14 2 17 caaaactgta 690 0.000355862184121238 0.0714285714285714 1 14 2 17 cttacatttc 691 0.000355862184121238 0.0714285714285714 1 14 2 17 NM_011605 refGene chr10 93515849 - 14837 graph_last l 15 68 gtgatgtaat 692 0.000355862184121238 0.0714285714285714 1 14 2 17 gtggggagcc 693 0.000355862184121238 0.0714285714285714 1 14 2 17 tgctgagatc 694 0.000374071910296907 5.5 22 4 41 5 tcttctcaca 695 0.000380369414938011 0.333333333333333 12 36 22 45 NM_153808 refGene chr19 23452625 + 68731 graph_last 0 137 ttcaaaaaaa 696 0.000391504177890502 0.190476190476190 4 21 8 27 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 697 0.000396016580547364 0.157894736842105 3 19 6 24 gtgccatatt 698 0.000396016580547364 0.157894736842105 3 19 6 24 NM_019673 refGene chr3 33648305 + 84083 graph_last l 87 204 gcaagagact 699 0.000396793517920792 9 18 2 34 3 aagccttgct 700 0.000420985398527069 0.259259259259259 7 27 13 34 ttccccaccc 701 0.00042216461713912 0.303030303030303 10 33 19 41 NM_009438 refGene chr7 38103328 - 120755 graph_last l 18 121 agctggggtt 702 0.000430703000423607 0.166666666666667 3 18 5 22 atactaacgt 703 0.000430703000423607 0.166666666666667 3 18 5 22 atggcttaat 704 0.000430703000423607 0.166666666666667 3 18 5 22 NM_146183 refGene chr7_random 1476992 - 126495 graph_last 12 78 cccggggcga 705 0.000430703000423607 0.166666666666667 3 18 5 22 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 706 0.000441571089616404 0.446428571428571 25 56 46 70 NM_177561 refGene chr5_random 22663978 + 109446 graph_last l 43 79 ggccagagac 707 0.0004437754360478 15 15 1 27 1 ggggctcaca 708 0.00045133320538416 0.2 4 20 7 25 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 709 0.00045133320538416 0.2 4 20 7 25 tgcactgact 710 0.000453809099729404 8.5 17 2 31 2 acccgccggg 711 0.000466604825429958 4.16666666666667 25 6 47 7 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 712 0.00046837338400906 0.323529411764706 11 34 21 43 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 713 0.000481097455234093 0 0 10 0 12 caaattaacc 714 0.000481097455234093 0 0 10 0 12 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 715 0.000481097455234093 0 0 10 0 12 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 716 0.000481097455234093 4.5 27 6 49 8 gaaagggagg 717 0.000481097455234093 0 0 10 0 12 gaggcttata 718 0.000481097455234093 0 0 10 0 12 BF465688 all_est chr17 29457036 - 58386 graph_last 0 20 ggtgacacgg 719 0.000481097455234093 0 0 10 0 12 gtaggatctt 720 0.000481097455234093 0 0 10 0 12 AF008649 knownGene chr17 36825307 + 59106 graph_last l 173 341 gacagatgga 721 0.000483156032445202 4 28 7 52 9 tgtatgtctt 722 0.000483156032445202 4 28 7 52 9 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 723 0.000485519897520047 6.66666666666667 20 3 37 4 tctgccctct 724 0.000494858114817145 2.78571428571429 39 14 72 17 gtgtatcttt 725 0.000497077868707542 0.275862068965517 8 29 15 36 agcatcaata 726 0.000512996995609262 Inf 11 0 21 0 catctagagg 727 0.000512996995609262 Inf 11 0 21 0 gacacgggag 728 0.000512996995609262 Inf 11 0 21 0 NM_019867 refGene chr1 89381889 - 4414 graph_last l 45 112 gttttgagaa 729 0.000512996995609262 Inf 11 0 21 0 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 730 0.000512996995609262 Inf 11 0 21 0 BC056498 knownGene chr7 134061373 + 126130 graph_last b 31 160 cggattcgca 731 0.000532204643680433 0.24 6 25 11 31 cggttgctgg 732 0.000536622627871407 0.333333333333333 11 33 20 42 AA145074 all_est chr8 41943301 + 129549 graph_last 22 83 ctgccaactt 733 0.000567345775677233 0.133333333333333 2 15 3 19 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 734 0.000567345775677233 0.133333333333333 2 15 3 19 NM_008946 refGene chr11 70098721 + 21147 graph_last b 35 205 gaacgcgacg 735 0.000578699968900659 0.217391304347826 5 23 10 29 genomic chr10 55089196 + 0 unique_long l 21 111 gactggctgt 736 0.000578699968900659 0.217391304347826 5 23 10 29 gctttgaatg 737 0.000597295908601104 0.386363636363636 17 44 32 55 AK013082 knownGene chr11 106483984 - 24539 graph_last l 11 75 ccgaagctga 738 0.000610403938060946 0.125 2 16 4 20 NM_078478 refGene chr14 31666620 - 40471 graph_last l 66 123 aacaaagcaa 739 0.000611213166174856 9 18 2 33 3 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 740 0.000633338041688357 2.85714285714286 40 14 74 18 tagttccgac 741 0.000669512376787685 0.269230769230769 7 26 13 33 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 742 0.000711825641129867 0.090909090909091 1 11 1 14 cctggcactg 743 0.000711825641129867 4.33333333333333 26 6 48 8 ctgctgcttc 744 0.000711825641129867 0.090909090909091 1 11 1 14 AK122380 knownGene chr8 84803497 + 131761 graph_last l 86 147 gcaggtcccc 745 0.000711825641129867 4.33333333333333 26 6 48 8 aaataaaaca 746 0.00071190214014783 8 16 2 29 2 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 747 0.00071190214014783 4.16666666666667 25 6 46 7 agactatgca 748 0.00071190214014783 8 16 2 29 2 NM_027629 refGene chr7 92441942 + 123455 graph_last l 36 59 caccgtaatg 749 0.00071190214014783 8 16 2 29 2 catcacacaa 750 0.00071190214014783 8 16 2 29 2 BY592621 all_est chr15 74472481 - 47856 graph_last l 47 89 cattgtaggc 751 0.00071190214014783 8 16 2 29 2 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 752 0.000714945097988403 4 28 7 51 9 NM_177274 refGene chr3 161475192 + 90591 graph_last l 51 77 agtatttatg 753 0.000715708320605733 14 14 1 25 1 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 754 0.000715708320605733 14 14 1 25 1 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 755 0.000715708320605733 14 14 1 25 1 tttttgatga 756 0.000717585710735941 0.333333333333333 11 33 21 42 ctgctggtgg 757 0.000719562573088018 3.625 29 8 54 10 NM_023336 refGene chr2 27714652 - 73019 graph_last l 8 50 aacctttctc 758 0.000719952993716674 0.0769230769230769 1 13 2 16 NM_133733 refGene chr9 42365508 - 136826 graph_last 2 33 actggctcca 759 0.000719952993716674 0.0769230769230769 1 13 2 16 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 760 0.000719952993716674 0.0769230769230769 1 13 2 16 NM_008691 refGene chr14 59840834 + 42397 graph_last l 80 163 agtgaatgca 761 0.000744352984077311 14 14 1 26 1 NM_172690 refGene chr4 42233911 + 92600 graph_last l 46 87 attctccctg 762 0.000744352984077311 14 14 1 26 1 NM_020252 refGene chr17 90853487 - 62103 graph_last l 40 138 ctcttgtttc 763 0.000744352984077311 14 14 1 26 1 gaaataaatg 764 0.000744352984077311 8 16 2 30 2 gcagagtgcg 765 0.000768138235621307 0.433962264150943 23 53 43 66 gtggctggtg 766 0.00077565817722233 0.28 7 25 12 31 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 767 0.000821228079858789 0.454545454545455 25 55 46 69 NM_198412 refGene chr4 100502464 + 95436 graph_last l 62 109 aaacaaaaca 768 0.00084256935742045 Inf 11 0 20 0 NM_028217 refGene chr16 33892019 - 53134 graph_last l 34 78 actgagattt 769 0.00084256935742045 Inf 11 0 20 0 attgtgtaat 770 0.00084256935742045 Inf 11 0 20 0 caaagaaaac 771 0.00084256935742045 Inf 11 0 20 0 NM_019713 refGene chr9 110198160 + 141255 graph_last l 40 75 ctcccgctct 772 0.00084256935742045 Inf 11 0 20 0 NM_022027 refGene chr10 4900639 - 9989 graph_last l 47 71 gaaagcttta 773 0.00084256935742045 Inf 11 0 20 0 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 774 0.00084256935742045 Inf 11 0 20 0 NM_009976 refGene chr2 149268091 + 80122 graph_last l 49 73 gcaggtactg 775 0.00084256935742045 Inf 11 0 20 0 NM_175427 refGene chr2 27379465 - 72982 graph_last l 61 108 ggacttgcca 776 0.00084256935742045 Inf 11 0 20 0 NM_175706 refGene chr2 22109787 + 72602 graph_last l 54 76 taaataacta 777 0.00084256935742045 Inf 11 0 20 0 tatgcctgtc 778 0.00084256935742045 Inf 11 0 20 0 NM_008113 refGene chr17 25793383 - 57991 graph_last l 42 84 tctgccagga 779 0.00084256935742045 Inf 11 0 20 0 NM_177089 refGene chr8 24012895 - 128650 graph_last l 25 46 tgctgtaact 780 0.00084256935742045 Inf 11 0 20 0 NM_007999 refGene chr19 10130399 + 67962 graph_last 30 134 ggctttggag 781 0.000849088507062065 0.25 6 24 11 30 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 782 0.000895815366545813 0.310344827586207 9 29 17 37 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 783 0.000895815366545813 0.310344827586207 9 29 17 37 NM_177379 refGene chr9 32958080 + 136212 graph_last l 33 60 cagaatgagc 784 0.000941270763522304 8.5 17 2 32 3 gagtcactct 785 0.000941270763522304 8.5 17 2 32 3 CF901669 all_est chrUn_random 3536148 + 142725 graph_last l 86 142 tccccctcaa 786 0.000941270763522304 8.5 17 2 32 3 NM_010562 refGene chr7 97874520 + 123908 graph_last l 55 216 ggagggatca 787 0.000966835212947142 0.227272727272727 5 22 10 28 NM_026421 refGene chr5 99138773 - 105093 graph_last 33 162 ttaaacctca 788 0.000966835212947142 0.227272727272727 5 22 10 28 gtatttcata 789 0.00101117877553423 4 24 6 44 7 aatggctagc 790 0.00101421762045323 0.142857142857143 2 14 3 18 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 791 0.00101421762045323 0.142857142857143 2 14 3 18 NM_008568 refGene chr5 136636318 - 107939 graph_last l 5 49 ctgcactttt 792 0.00101421762045323 0.142857142857143 2 14 3 18 CA451281 all_est chr17 34611718 - 58900 graph_last 0 30 agtattagac 793 0.00106499545150241 0 0 9 0 11 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 794 0.00106499545150241 0 0 9 0 11 NM_029077 refGene chr4 45792216 + 92915 graph_last 3 33 gaagaatccg 795 0.00106499545150241 0 0 9 0 11 gatgctgcca 796 0.00106499545150241 0.238095238095238 5 21 9 27 NM_021560 refGene chr3 17968391 + 83311 graph_last l 12 54 gcgatctgcc 797 0.00106499545150241 0 0 9 0 11 NM_010110 refGene chrX 88985124 + 150221 graph_second 0 13 gggggtggag 798 0.00106499545150241 0 0 9 0 11 NM_145587 refGene chr7 118304654 + 125072 graph_last l 2 19 gggtaggaga 799 0.00106499545150241 0 0 9 0 11 NM_138596 refGene chr13 67123813 + 35924 graph_last l 17 106 ggtttcaact 800 0.00106499545150241 0.238095238095238 5 21 9 27 gtgacggctg 801 0.00106499545150241 0 0 9 0 11 NM_019413 refGene chr16 74181707 + 55087 graph_last 1 29 taagaaacct 802 0.00106499545150241 0 0 9 0 11 NM_172681 refGene chr3 85751589 - 86328 graph_last 2 23 tgagggactg 803 0.00106499545150241 0 0 9 0 11 genomic chr16 44061816 - 0 unique_long l 142 249 tctacacagt 804 0.00110525498815849 7.5 15 2 28 2 cttgcaagtg 805 0.00112102610800335 2.38095238095238 50 21 92 27 AF065991 knownGene chr10 18743590 - 10634 graph_last l 9 59 aaaaatgttg 806 0.00112316886347638 0.133333333333333 2 15 4 19 NM_178631 refGene chr3 13949517 + 83169 graph_second 0 146 acgggcaaaa 807 0.00112316886347638 0.133333333333333 2 15 4 19 atttgatatt 808 0.00113240455499561 13 13 1 24 1 cagaccctac 809 0.00113240455499561 13 13 1 24 1 tccctgtggt 810 0.00113240455499561 13 13 1 24 1 NM_172512 refGene chr3 97919894 - 87291 graph_last l 130 345 gaacaggcag 811 0.00126416795236570 0.390243902439024 16 41 30 51 NM_009536 refGene chr11 75336854 + 21637 graph_last l 42 180 cctccatcct 812 0.00127943734802155 0.291666666666667 7 24 12 30 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 813 0.00128213940940697 2.33333333333333 49 21 90 26 ttccagctgc 814 0.00128213940940697 2.33333333333333 49 21 90 26 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 815 0.00129664781904114 0.363636363636364 12 33 22 42 atgtagtagt 816 0.00138804595048119 0.260869565217391 6 23 11 29 genomic chrM 5841 + 0 unique_long l 160 1099 aaacccccag 817 0.00140941313359219 Inf 10 0 19 0 actagggtaa 818 0.00140941313359219 Inf 10 0 19 0 atagtgtaaa 819 0.00140941313359219 Inf 10 0 19 0 genomic chr3 130443077 + 0 unique_long l 24 48 caggtattag 820 0.00140941313359219 Inf 10 0 19 0 NM_016968 refGene chr16 92625375 + 55990 graph_last l 32 218 ccatcggtgt 821 0.00140941313359219 Inf 10 0 19 0 AU067644 all_est chr2 104406186 - 77512 graph_last l 23 42 gagttgctgt 822 0.00140941313359219 Inf 10 0 19 0 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 823 0.00140941313359219 Inf 10 0 19 0 NM_019406 refGene chr2 31298595 - 73309 graph_last l 58 96 taattaaatg 824 0.00140941313359219 Inf 10 0 19 0 NM_172498 refGene chr14 57879884 - 42254 graph_last l 57 118 tctgtggaga 825 0.00140941313359219 Inf 10 0 19 0 NM_011116 refGene chr7 21072633 - 119593 graph_last l 50 113 tgcgtatgtg 826 0.00140941313359219 Inf 10 0 19 0 AK122424 knownGene chr11 73955003 - 21458 graph_last l 36 56 tggtagaacc 827 0.00140941313359219 Inf 10 0 19 0 NM_011170 refGene chr2 132080742 + 79291 graph_last l 147 432 tattttgttt 828 0.00141575584114560 3.22222222222222 29 9 54 11 NM_018873 refGene chr11 97094789 - 23526 graph_last l 52 102 taagcacaga 829 0.00143817462081824 4.4 22 5 40 6 NM_009790 refGene chr12 95771041 + 30604 graph_last l 97 273 tccaacttgt 830 0.00143817462081824 4.4 22 5 40 6 ccagtgcaga 831 0.00144690310040555 0.0833333333333333 1 12 2 15 NM_021549 refGene chr7 37781909 - 120715 graph_last 6 67 cgtcactgcc 832 0.00144690310040555 0.0833333333333333 1 12 2 15 NM_009980 refGene chr7 124868336 - 125551 graph_last l 7 35 gctctaccag 833 0.00144690310040555 0.0833333333333333 1 12 2 15 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 834 0.00144690310040555 0.0833333333333333 1 12 2 15 NM_016744 refGene chr2 80196841 - 76137 graph_last l 49 73 acaacctatg 835 0.00145296572303467 8.5 17 2 31 3 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 836 0.00145296572303467 8.5 17 2 31 3 NM_025879 refGene chr13 102633148 + 37637 graph_last l 94 162 gcaataaata 837 0.00145296572303467 8.5 17 2 31 3 ttataccagc 838 0.00145296572303467 8.5 17 2 31 3 NM_018804 refGene chr3 90895018 - 86721 graph_last l 44 123 tttatggaca 839 0.00145296572303467 8.5 17 2 31 3 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 840 0.00145580151817775 0.1 1 10 1 13 gcggtgaatc 841 0.00145580151817775 0.1 1 10 1 13 ggctccgggg 842 0.00145580151817775 0.1 1 10 1 13 NM_133350 refGene chr5 29202901 + 101526 graph_last l 62 125 acctccaggc 843 0.00146400328534632 3.83333333333333 23 6 43 7 NM_016792 refGene chr18 63768936 - 65404 graph_last l 103 198 cagttgtaaa 844 0.00146400328534632 3.83333333333333 23 6 43 7 NM_173396 refGene chr2 157499191 + 80813 graph_last l 110 176 gtacaataca 845 0.00149715385631058 4.16666666666667 25 6 46 8 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 846 0.00154070975449417 0.333333333333333 11 33 21 41 NM_145969 refGene chr14 21167374 + 39829 graph_last l 62 159 ttgcttttgg 847 0.00166432427535309 0.28 7 25 13 31 NM_008862 refGene chr3 7518293 + 82902 graph_last l 52 241 ctcacataac 848 0.00173550367568071 0.238095238095238 5 21 9 26 NM_080555 refGene chr4 104090744 + 95672 graph_last 45 145 gtgtagatgc 849 0.00178751205018396 6 18 3 34 4 NM_013509 refGene chr6 126683741 - 116901 graph_last l 35 99 accaagtttg 850 0.00182722912639129 12 12 1 23 1 NM_033474 refGene chr16 18012617 - 52029 graph_last l 28 66 caaaccacta 851 0.00182722912639129 12 12 1 23 1 NM_133849 refGene chr2 179910762 - 82351 graph_last l 64 92 ctctgcaatc 852 0.00182722912639129 12 12 1 23 1 NM_019990 refGene chr7 93675657 + 123581 graph_last l 53 87 gccccaataa 853 0.00182722912639129 12 12 1 23 1 AK129267 knownGene chr18_random 12235074 + 67016 graph_last l 26 49 ggaacaggag 854 0.00182722912639129 12 12 1 23 1 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 855 0.00182722912639129 12 12 1 23 1 NM_011844 refGene chr6 90281126 + 114831 graph_last 41 102 tgagcatcgg 856 0.00182722912639129 12 12 1 23 1 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 857 0.00182722912639129 0.142857142857143 2 14 3 17 BC049262 knownGene chr10 101671005 + 15243 graph_last l 48 109 tgctctggag 858 0.00182722912639129 12 12 1 23 1 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 859 0.00182722912639129 12 12 1 23 1 AK075830 knownGene chr16 8108129 - 51324 graph_last l 24 106 ctcgctaatg 860 0.00195788616060052 0.210526315789474 4 19 8 24 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 861 0.00204775154945462 5 20 4 36 5 AK122280 knownGene chrX 84771967 - 150054 graph_last l 55 119 gccccagact 862 0.00206696894626503 5 20 4 37 5 aaaagaggaa 863 0.00220424478078419 0.176470588235294 3 17 6 21 cctccctttt 864 0.00220424478078419 0.176470588235294 3 17 6 21 tcgagcagtt 865 0.00221053984012277 0.1875 3 16 5 20 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 866 0.00221613873940357 3.57142857142857 25 7 47 9 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 867 0.00223282259719069 0.272727272727273 6 22 11 28 NM_007508 refGene chr16 44062095 - 53860 graph_last l 42 142 ctcagaaagc 868 0.00232483480124274 8 16 2 30 3 NM_181595 refGene chr6 4868718 + 110051 graph_last l 46 80 ggagaaacag 869 0.00232483480124274 8 16 2 30 3 NM_022423 refGene chr11 58531070 - 20273 graph_second 0 9 aatgtgctcg 870 0.00235376414154013 0 0 8 0 10 genomic chr11 74745310 + 0 unique_long l 21 26 agtggtgaac 871 0.00235376414154013 Inf 10 0 18 0 caaaagaagg 872 0.00235376414154013 0 0 8 0 10 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 873 0.00235376414154013 Inf 10 0 18 0 genomic chr10 6761017 - 0 unique_long l 27 32 cctcatttcc 874 0.00235376414154013 Inf 10 0 18 0 NM_144824 refGene chr11 69161993 + 21033 graph_last 4 30 ctacagagga 875 0.00235376414154013 0 0 8 0 10 ctgggacagc 876 0.00235376414154013 Inf 10 0 18 0 J05479 knownGene chr3 140847537 + 89686 graph_last l 38 69 cttacctcag 877 0.00235376414154013 Inf 10 0 18 0 BC042720 knownGene chr1 68276988 + 3240 graph_last l 38 96 gaaaatgcat 878 0.00235376414154013 Inf 10 0 18 0 gagaaaggag 879 0.00235376414154013 0 0 8 0 10 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 880 0.00235376414154013 0 0 8 0 10 NM_175201 refGene chr4 43416344 - 92730 graph_last 1 30 gcgctgtttg 881 0.00235376414154013 0 0 8 0 10 gctgtcgtca 882 0.00235376414154013 0 0 8 0 10 ggaaagtatg 883 0.00235376414154013 0 0 8 0 10 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 884 0.00235376414154013 0.418604651162791 18 43 34 54 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 885 0.00235376414154013 0 0 8 0 10 ggggagtgga 886 0.00235376414154013 0 0 8 0 10 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 887 0.00235376414154013 Inf 10 0 18 0 NM_025355 refGene chrX 123699543 - 151490 graph_last l 42 98 gtacattgta 888 0.00235376414154013 Inf 10 0 18 0 gtgctctctg 889 0.00235376414154013 0 0 8 0 10 NM_145501 refGene chr19 42171628 + 69870 graph_last l 19 39 gtggtagccc 890 0.00235376414154013 Inf 10 0 18 0 NM_033524 refGene chr2 117452706 + 78241 graph_last l 37 75 taattggacg 891 0.00235376414154013 Inf 10 0 18 0 tagcgtctca 892 0.00235376414154013 0 0 8 0 10 genomic chr3 33848407 - 0 unique_long l 19 30 tcactgtcag 893 0.00235376414154013 Inf 10 0 18 0 tcagccccac 894 0.00235376414154013 0 0 8 0 10 NM_175752 refGene chr2 74005861 - 75776 graph_last l 17 24 tctaactcca 895 0.00235376414154013 Inf 10 0 18 0 genomic chr2 167715885 - 0 unique_long l 23 39 tctgtctttt 896 0.00235376414154013 Inf 10 0 18 0 tggcgtgtgc 897 0.00235376414154013 0 0 8 0 10 gttgtgattt 898 0.00246298511351629 0.333333333333333 9 27 16 34 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 899 0.00277614847793633 6 18 3 33 4 agaggtgtag 900 0.0027811408998179 7 14 2 26 2 NM_008691 refGene chr14 59839646 + 42397 graph_last l 111 177 ggaaaaatag 901 0.0027811408998179 7 14 2 26 2 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 902 0.00282691636671592 0.25 5 20 9 25 aaccgtgaat 903 0.00282691636671592 0.25 5 20 9 25 ctgtcatttg 904 0.00282691636671592 0.25 5 20 9 25 ggcctgaggc 905 0.00282691636671592 0.25 5 20 9 25 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 906 0.00282691636671592 0.382352941176471 13 34 24 43 aattcccttt 907 0.00289848811939586 0.090909090909091 1 11 2 14 NM_175251 refGene chr15 98368120 + 49697 graph_last l 4 37 atgctgagag 908 0.00289848811939586 0.090909090909091 1 11 2 14 BC021509 knownGene chr5 129833260 - 107354 graph_last 1 33 attacagcca 909 0.00289848811939586 0.090909090909091 1 11 2 14 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 910 0.00289848811939586 0.090909090909091 1 11 2 14 gagtgattat 911 0.00289848811939586 0.090909090909091 1 11 2 14 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 912 0.00289848811939586 0.090909090909091 1 11 2 14 BC049168 knownGene chr4 132377063 - 97875 graph_last l 87 163 cagaaaggca 913 0.00295455440040479 12 12 1 22 1 NM_013681 refGene chr6 116906623 + 116249 graph_last l 64 93 ccgctataac 914 0.00295455440040479 12 12 1 22 1 tctctgaatg 915 0.00295455440040479 12 12 1 22 1 AK021160 knownGene chr9 114000545 + 141657 graph_last l 47 71 ttgctgctgc 916 0.00295455440040479 12 12 1 22 1 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 917 0.00295455440040479 12 12 1 22 1 NM_009983 refGene chr7 134433272 - 126175 graph_last l 270 537 cctcagcctg 918 0.00297231849188829 2.75 33 12 61 15 NM_011323 refGene chr15 103059910 + 50127 graph_last l 49 147 gggagactct 919 0.00299927105885444 4.75 19 4 35 5 acagtgggga 920 0.0030099473668891 0.32 8 25 15 32 genomic chr19 46300922 - 0 unique_long l 4 44 actcaaatgg 921 0.00304542287239449 0.1 1 10 1 12 NM_172379 refGene chr14 15268275 - 39407 graph_last 12 50 cactgacgag 922 0.00304542287239449 0.1 1 10 1 12 NM_009876 refGene chr7 135531689 - 126263 graph_last 2 36 cgtggatccc 923 0.00304542287239449 0.1 1 10 1 12 NM_198108 refGene chr19 42126302 - 69866 graph_last l 7 41 ggcttctcct 924 0.00304542287239449 0.1 1 10 1 12 NM_008541 refGene chr13 56517408 + 35272 graph_last l 3 30 gggagcctta 925 0.00304542287239449 0.1 1 10 1 12 NM_007971 refGene chr6 47845060 - 112413 graph_last 1 26 tgcagctttc 926 0.00304542287239449 0.1 1 10 1 12 gcaggacatt 927 0.00324637968088104 3.83333333333333 23 6 43 8 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 928 0.00324637968088104 3.83333333333333 23 6 43 8 NM_007410 refGene chr3 142379543 + 89786 graph_last l 11 62 aactaggcaa 929 0.00328290021373567 0.153846153846154 2 13 3 16 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 930 0.00328290021373567 0.153846153846154 2 13 3 16 atggcaattt 931 0.00328290021373567 0.153846153846154 2 13 3 16 NM_009336 refGene chr3 97823540 + 87276 graph_last l 7 48 ctgggaccgg 932 0.00328290021373567 0.153846153846154 2 13 3 16 NM_020588 refGene chr1 137257395 - 6407 graph_last l 27 82 gagcagggga 933 0.00328290021373567 0.153846153846154 2 13 3 16 NM_007742 refGene chr11 94532009 + 23230 graph_last 0 52 gggccccctg 934 0.00328290021373567 0.153846153846154 2 13 3 16 tctgttagct 935 0.00328290021373567 0.153846153846154 2 13 3 16 NM_009786 refGene chr1 163743500 - 7720 graph_last b 19 109 acgcgaaaac 936 0.00339872894859184 0.222222222222222 4 18 7 22 tttctgtatg 937 0.00339872894859184 0.222222222222222 4 18 7 22 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 938 0.0035812562717539 8 16 2 29 3 NM_008098 refGene chr6 35451578 - 111690 graph_last l 25 63 atcagtctat 939 0.0035812562717539 8 16 2 29 3 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 940 0.0035812562717539 8 16 2 29 3 NM_199151 refGene chr9 72494658 + 139089 graph_last l 15 90 cgactctgtt 941 0.00374811929239366 0.2 3 15 5 19 gcaatttaac 942 0.00374811929239366 0.2 3 15 5 19 gtgccaggaa 943 0.00374811929239366 0.2 3 15 5 19 tatctgtcta 944 0.00376924718681088 0.346153846153846 9 26 16 33 NM_177663 refGene chr3 90008321 + 86591 graph_last l 16 61 gggatccagg 945 0.00384888870415831 0.142857142857143 2 14 4 17 NM_009725 refGene chr3 109064595 - 88118 graph_last 238 466 tggtgaagag 946 0.00390886551458046 2.19047619047619 46 21 85 26 NM_172563 refGene chr11 89923502 - 22996 graph_last l 17 30 accagaatat 947 0.00395001618828885 Inf 9 0 17 0 genomic chr3 90896443 + 0 unique_long l 22 40 atcttactac 948 0.00395001618828885 Inf 9 0 17 0 attgcttaga 949 0.00395001618828885 0.357142857142857 10 28 18 35 ri6330417G04 rikenClones chr13 90092257 - 36806 graph_last l 39 64 caaattaaac 950 0.00395001618828885 Inf 9 0 17 0 BQ178924 all_est chr13 51168087 - 34869 graph_last l 37 82 gaactggcgg 951 0.00395001618828885 Inf 9 0 17 0 gagaaatcag 952 0.00395001618828885 Inf 9 0 17 0 NM_008429 refGene chr1 176179918 - 8554 graph_last l 25 37 gagagactta 953 0.00395001618828885 Inf 9 0 17 0 genomic chr13 54163511 - 0 unique_long l 21 43 ggcttcttct 954 0.00395001618828885 Inf 9 0 17 0 NM_009946 refGene chr13 54162183 + 35031 graph_last l 15 34 gggaagatgc 955 0.00395001618828885 Inf 9 0 17 0 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 956 0.00395001618828885 0.357142857142857 10 28 18 35 NM_033524 refGene chr2 117450936 + 78241 graph_last l 18 37 tacgtgtagg 957 0.00395001618828885 Inf 9 0 17 0 NM_133241 refGene chr15 90621058 - 49218 graph_last l 44 102 taggagcaaa 958 0.00395001618828885 Inf 9 0 17 0 NM_172723 refGene chr5 137216718 - 107979 graph_last l 48 58 tcccctggaa 959 0.00395001618828885 Inf 9 0 17 0 NM_009115 refGene chr10 78400956 + 13741 graph_last l 78 132 tctgacctgc 960 0.00395001618828885 Inf 9 0 17 0 NM_172859 refGene chr2 144543036 - 79873 graph_last l 56 93 tgtgttataa 961 0.00395001618828885 Inf 9 0 17 0 genomic chr13 90093357 - 0 unique_long l 19 33 ttaggtgagg 962 0.00395001618828885 Inf 9 0 17 0 tttttaagca 963 0.00395001618828885 Inf 9 0 17 0 ggttttcaag 964 0.00399546556371394 0.393939393939394 13 33 24 42 tgctgtgaaa 965 0.00412833239780087 2.57142857142857 36 14 67 18 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 966 0.00412833239780087 0.304347826086957 7 23 13 29 NM_177301 refGene chr3 93009576 - 86949 graph_last 70 267 ggcagcacaa 967 0.00414636342732385 0.465116279069767 20 43 36 54 AK048138 knownGene chr15 80705321 - 48408 graph_last l 59 103 cgttccacca 968 0.00415110856314792 5.66666666666667 17 3 31 4 gagttctctg 969 0.00429736863345133 3.25 26 8 48 10 NM_011695 refGene chr14 16734347 + 39565 graph_last 47 123 acaaattatg 970 0.00436036159109864 7 14 2 25 2 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 971 0.00436036159109864 7 14 2 25 2 NM_010595 refGene chr6 128564638 - 117035 graph_last l 78 117 atctgttcat 972 0.00436036159109864 7 14 2 25 2 cagactttgt 973 0.00436036159109864 7 14 2 25 2 gaggctttgc 974 0.00436036159109864 1.74468085106383 82 47 151 59 taaaaagaag 975 0.00436036159109864 7 14 2 25 2 NM_177887 refGene chr5_random 412529 - 108970 graph_last 70 146 cctttctgtc 976 0.00445005385147629 3.42857142857143 24 7 45 9 tggagagaat 977 0.00456156498257096 0.263157894736842 5 19 9 24 NM_019498 refGene chr2 28499439 + 73055 graph_last l 50 160 caatgctgta 978 0.00463629081425924 3.83333333333333 23 6 42 8 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 979 0.00463939891858705 1.77777777777778 80 45 147 57 aaaacagtgg 980 0.00469928829247752 0.552238805970149 37 67 68 84 aattaattaa 981 0.00477592183204484 11 11 1 21 1 acacctcaaa 982 0.00477592183204484 11 11 1 21 1 actggtgact 983 0.00477592183204484 11 11 1 21 1 agttacttat 984 0.00477592183204484 11 11 1 21 1 ctgtgtggcc 985 0.00477592183204484 11 11 1 21 1 NM_008593 refGene chr4 113815543 - 96269 graph_last 0 51 gcttgaaaaa 986 0.00477592183204484 11 11 1 21 1 NM_182839 refGene chr13 71586451 + 36077 graph_last l 37 107 ggtgttctga 987 0.00477592183204484 11 11 1 21 1 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 988 0.00477592183204484 11 11 1 21 1 NM_008053 refGene chr3 35038626 - 84156 graph_last l 4 37 aaaattgctt 989 0.00513043043558675 0 0 7 0 9 acattgaaaa 990 0.00513043043558675 0 0 7 0 9 NM_025789 refGene chr17 7422402 + 56847 graph_last 7 49 acccatccag 991 0.00513043043558675 0 0 7 0 9 NM_178777 refGene chr3 105046858 + 87803 graph_last 1 12 actggtgcgc 992 0.00513043043558675 0 0 7 0 9 NM_011841 refGene chr11 61059895 + 20525 graph_last 1 14 agaggcagca 993 0.00513043043558675 0 0 7 0 9 NM_198640 refGene chr12 109045110 - 31569 graph_last 0 26 aggctctcca 994 0.00513043043558675 0 0 7 0 9 cacaacgccg 995 0.00513043043558675 0 0 7 0 9 NM_010583 refGene chr11 45991197 + 19428 graph_second 0 9 cacgacctga 996 0.00513043043558675 0 0 7 0 9 NM_015735 refGene chr19 10550968 + 68008 graph_last l 7 18 cagaaccgac 997 0.00513043043558675 0 0 7 0 9 NM_009238 refGene chr13 28838778 + 33570 graph_second 0 10 ccaatgctcc 998 0.00513043043558675 0 0 7 0 9 NM_016701 refGene chr3 90065439 + 86598 graph_last 0 53 cccagaggag 999 0.00513043043558675 0 0 7 0 9 NM_011029 refGene chr9 122505801 + 142160 graph_last 2 12 cgaggtacta 1000 0.00513043043558675 0 0 7 0 9 ctactgacat 1001 0.00513043043558675 0 0 7 0 9 gacgagatgg 1002 0.00513043043558675 0 0 7 0 9 NM_013722 refGene chr10 88730935 + 14549 graph_last 0 12 ggaaggaggt 1003 0.00513043043558675 0 0 7 0 9 gggaagtctg 1004 0.00513043043558675 0 0 7 0 9 gggggaattt 1005 0.00513043043558675 0 0 7 0 9 NM_009689 refGene chr11 117408549 + 25353 graph_last 1 27 ggtaagtgtg 1006 0.00513043043558675 0 0 7 0 9 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 1007 0.00513043043558675 0 0 7 0 9 gtcacgaaaa 1008 0.00513043043558675 0 0 7 0 9 NM_009234 refGene chr12 21780471 + 26716 graph_second 0 17 gtcagagaga 1009 0.00513043043558675 0 0 7 0 9 NM_016959 refGene chr3 88105443 + 86463 graph_last 3 19 gtgccgaccg 1010 0.00513043043558675 0 0 7 0 9 NM_008228 refGene chr4 128429117 - 97479 graph_last 0 18 gttgatttca 1011 0.00513043043558675 0 0 7 0 9 taacatcttc 1012 0.00513043043558675 0 0 7 0 9 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 1013 0.00513043043558675 0 0 7 0 9 tgctgccatt 1014 0.00513043043558675 0 0 7 0 9 ttgctgcctt 1015 0.00513043043558675 0 0 7 0 9 NM_177301 refGene chr3 93007623 + 86949 graph_second 2 22 tttgggcaga 1016 0.00513043043558675 0 0 7 0 9 NM_025567 refGene chr15 77978170 + 48141 graph_last l 205 434 gccttctcag 1017 0.0053037511732953 2.35294117647059 40 17 73 21 NM_033080 refGene chr7 29499004 + 120269 graph_last l 21 125 gtcgtgccat 1018 0.00546897003141825 0.222222222222222 4 18 8 22 tgtgttgaga 1019 0.00546897003141825 0.222222222222222 4 18 8 22 aaattggatc 1020 0.00550843591032493 7.5 15 2 28 3 genomic chr11 67258806 - 0 unique_long l 34 64 catagggtgc 1021 0.00550843591032493 7.5 15 2 28 3 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 1022 0.00550843591032493 7.5 15 2 28 3 NM_172430 refGene chr1 85079480 - 4058 graph_last l 92 139 tgttgtacct 1023 0.00550843591032493 7.5 15 2 28 3 NM_153563 refGene chr3 110751711 - 88229 graph_last l 16 90 gtggggtttt 1024 0.00555188104727191 0.235294117647059 4 17 7 21 NM_009736 refGene chr4 40984051 - 92417 graph_last l 51 206 gctgccaggg 1025 0.00557507844648806 0.36 9 25 16 32 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 1026 0.00558510928625249 0.1 1 10 2 13 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 1027 0.00558510928625249 0.1 1 10 2 13 NM_025617 refGene chr4 106060545 - 95810 graph_last l 11 59 gcaggggcgg 1028 0.00558510928625249 0.1 1 10 2 13 NM_010014 refGene chr4 103601428 + 95607 graph_last l 4 42 gtttttggca 1029 0.00558510928625249 0.1 1 10 2 13 AK028183 knownGene chr2 30233775 + 73205 graph_last l 11 48 agggcctgtg 1030 0.00585129521886785 0.166666666666667 2 12 3 15 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 1031 0.00585129521886785 0.166666666666667 2 12 3 15 NM_153410 refGene chr2 26614778 + 72938 graph_last l 18 78 ggtcctttct 1032 0.00585129521886785 0.166666666666667 2 12 3 15 tcctgtgtca 1033 0.00585129521886785 0.370370370370370 10 27 18 34 NM_016805 refGene chr1 182356679 - 8917 graph_last l 7 38 ttaggttcgg 1034 0.00585129521886785 0.166666666666667 2 12 3 15 NM_009829 refGene chr6 129065716 - 117072 graph_last l 2 16 accaaaacgc 1035 0.00618133224749632 0.111111111111111 1 9 1 11 NM_178637 refGene chr19 5460618 + 67578 graph_last l 9 53 agaatgacag 1036 0.00618133224749632 0.111111111111111 1 9 1 11 agctccccct 1037 0.00618133224749632 0.111111111111111 1 9 1 11 NM_029432 refGene chr2 130945921 - 79188 graph_last 1 24 aggaagctga 1038 0.00618133224749632 0.111111111111111 1 9 1 11 NM_010327 refGene chr16 18227773 - 52048 graph_last l 6 31 caggagatgt 1039 0.00618133224749632 0.111111111111111 1 9 1 11 NM_010894 refGene chr2 79814959 - 76114 graph_last l 7 44 cagttgcaat 1040 0.00618133224749632 0.111111111111111 1 9 1 11 ccacacaagc 1041 0.00618133224749632 0.111111111111111 1 9 1 11 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 1042 0.00618133224749632 0.111111111111111 1 9 1 11 genomic chr6 89403818 - 0 unique_short s 3 19 gttcgaccag 1043 0.00618133224749632 0.111111111111111 1 9 1 11 NM_009829 refGene chr6 129075403 - 117072 graph_last b 4 22 tacccgccgt 1044 0.00618133224749632 0.111111111111111 1 9 1 11 NM_016884 refGene chr14 43935722 - 41160 graph_last 11 70 attgccctgc 1045 0.00624370895726105 0.214285714285714 3 14 5 18 cccaaggaga 1046 0.00624370895726105 0.214285714285714 3 14 5 18 NM_011655 refGene chr17 35502129 + 58992 graph_last l 16 135 tgccaggcac 1047 0.00624370895726105 0.214285714285714 3 14 5 18 NM_011273 refGene chr1 158735049 - 7403 graph_last l 10 76 tggagtttcc 1048 0.00624370895726105 0.214285714285714 3 14 5 18 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 1049 0.00624370895726105 0.214285714285714 3 14 5 18 NM_007376 refGene chr6 130377420 - 117204 graph_last l 12 80 ggtacaccgc 1050 0.00646007071732606 0.2 3 15 6 19 NM_013872 refGene chr15 83498097 - 48726 graph_last l 82 202 ggagttgtgc 1051 0.00647600408951997 4.5 18 4 33 5 gtctcttcac 1052 0.00649994169086707 3.66666666666667 22 6 41 8 aaataaagcc 1053 0.00660662139494457 Inf 9 0 16 0 genomic chr7 114715612 + 0 unique_long l 15 27 aatcagacct 1054 0.00660662139494457 Inf 9 0 16 0 NM_011498 refGene chr6 110362975 + 115903 graph_last 26 54 ctgtccaagg 1055 0.00660662139494457 Inf 9 0 16 0 NM_183173 refGene chr11 53101835 - 19914 graph_last l 39 56 gagtatggct 1056 0.00660662139494457 Inf 9 0 16 0 NM_139303 refGene chr2 109472312 + 77777 graph_last 0 114 gccagaaaaa 1057 0.00660662139494457 Inf 9 0 16 0 gtagtttaca 1058 0.00660662139494457 Inf 9 0 16 0 NM_175545 refGene chr14 18087396 - 39614 graph_last l 31 69 gtttcatttt 1059 0.00660662139494457 Inf 9 0 16 0 tagtgtgtgt 1060 0.00660662139494457 Inf 9 0 16 0 AK083224 knownGene chr14 85652753 - 43463 graph_last 1 28 tgatgatgtt 1061 0.00660662139494457 Inf 9 0 16 0 gctgggcggg 1062 0.00662847033853441 2.9 29 10 53 13 X57780 knownGene chrM 6812 - 142531 graph_second 74 139 aagtcattct 1063 0.00666470899505252 4 20 5 36 6 atgcagagac 1064 0.00666470899505252 4 20 5 36 6 gcctatccaa 1065 0.00666470899505252 4 20 5 36 6 NM_019794 refGene chr8 86434162 - 131936 graph_last l 106 188 gttgtaaagt 1066 0.00666470899505252 4 20 5 36 6 NM_008155 refGene chr7 27846456 - 120117 graph_second l 139 422 ggggctcagc 1067 0.00667765902633466 3.5 21 6 38 7 NM_134150 refGene chr19 7190511 - 67742 graph_last l 96 232 tggggtctca 1068 0.00667765902633466 3.5 21 6 38 7 NM_144915 refGene chr5 142286412 + 108317 graph_last l 263 516 tatgaattaa 1069 0.00673565851818376 2.53846153846154 33 13 60 16 NM_023579 refGene chr14 114054037 + 44438 graph_last l 10 67 tctggcagtc 1070 0.00674917625569047 0.153846153846154 2 13 4 16 tctgtccagt 1071 0.00674917625569047 0.153846153846154 2 13 4 16 cctttcaaac 1072 0.00675739103312756 6.5 13 2 24 2 NM_009723 refGene chr6 115505700 - 116175 graph_last l 41 101 ggatacgttt 1073 0.00675739103312756 6.5 13 2 24 2 NM_028207 refGene chr11 101636536 - 24017 graph_last l 31 53 gtctacgtat 1074 0.00675739103312756 6.5 13 2 24 2 NM_007581 refGene chr15_random 8698033 - 50608 graph_last 94 176 ctccattaag 1075 0.00677189816733146 3.5 21 6 39 7 NM_019535 refGene chr4 84058309 + 94668 graph_last l 76 184 gccagttttc 1076 0.00677189816733146 3.5 21 6 39 7 tacacacctg 1077 0.00677189816733146 3.5 21 6 39 7 tggaagaaac 1078 0.00716921829403345 2.8 28 10 51 12 gcggcggggc 1079 0.00717402365474588 0.277777777777778 5 18 9 23 NM_022027 refGene chr10 4901435 - 9989 graph_last 23 32 catcaatggg 1080 0.00761210142926761 11 11 1 20 1 NM_178679 refGene chr10 69779847 - 13250 graph_last l 26 73 cggactatga 1081 0.00761210142926761 11 11 1 20 1 NM_019634 refGene chrX 9144236 - 147217 graph_last l 47 154 ctagacagag 1082 0.00761210142926761 11 11 1 20 1 cttctatttg 1083 0.00761210142926761 11 11 1 20 1 NM_007727 refGene chr15 94185949 + 49433 graph_last l 34 87 ctttaagatg 1084 0.00761210142926761 11 11 1 20 1 NM_028207 refGene chr11 101635110 - 24017 graph_last l 59 118 ggaggtcctg 1085 0.00761210142926761 11 11 1 20 1 tccctgtgta 1086 0.00761210142926761 11 11 1 20 1 X57780 knownGene chrM 5236 - 142531 graph_second 45 97 tcgaattgca 1087 0.00761210142926761 11 11 1 20 1 NM_010010 refGene chr12 103924585 + 31051 graph_last l 48 131 tgaccagctg 1088 0.00761210142926761 11 11 1 20 1 NM_026977 refGene chr1 76698301 + 3685 graph_last l 39 78 ttctcttctc 1089 0.00761210142926761 11 11 1 20 1 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 1090 0.0083086128168103 7 14 2 26 3 AK083224 knownGene chr14 86523813 - 43463 graph_last l 39 63 cgtccaggtt 1091 0.0083086128168103 7 14 2 26 3 AF031816 knownGene chr9 43684219 - 136913 graph_last l 43 91 gtgatagcgt 1092 0.0083086128168103 7 14 2 26 3 NM_024197 refGene chr1 94385059 - 4734 graph_last l 141 410 gagatgcctg 1093 0.008354406546363 2.21052631578947 42 19 77 24 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 1094 0.00863610830540796 7.5 15 2 27 3 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 1095 0.00863610830540796 7.5 15 2 27 3 genomic chr3 77282410 + 0 unique_long l 61 81 tgattatgtg 1096 0.00863610830540796 7.5 15 2 27 3 tctacaagaa 1097 0.00882022346850834 0.535714285714286 30 56 56 71 NM_011492 refGene chr10 82439824 + 14048 graph_last l 15 81 ccgccctgcg 1098 0.00923292513330551 0.25 4 16 7 20 ttacttgttt 1099 0.0093972059372796 3.66666666666667 22 6 40 8 ctcttcccac 1100 0.0101448665806967 3.8 19 5 35 6 NM_011588 refGene chr7 10287113 - 118856 graph_last l 64 160 agaggtggtt 1101 0.0103115710920251 2.7 27 10 50 12 cctacagtcc 1102 0.0103447767746457 0.333333333333333 8 24 15 30 NM_009551 refGene chr19 21463372 + 68566 graph_last 171 278 ctattcagca 1103 0.0105083131459393 2.5 30 12 56 15 tattagtctt 1104 0.0107192730491372 2.25 36 16 67 20 AI787975 all_est chr4 84452734 + 94672 graph_last 0 55 aaccagcaaa 1105 0.0107627036925945 0.181818181818182 2 11 3 14 NM_013922 refGene chr11 50436366 - 19703 graph_last l 11 46 caaaagttta 1106 0.0107627036925945 0.181818181818182 2 11 3 14 gcgacgcggg 1107 0.0107627036925945 0.181818181818182 2 11 3 14 gggctgctca 1108 0.0107627036925945 0.181818181818182 2 11 3 14 NM_013785 refGene chr9 110683038 + 141326 graph_last l 7 73 ggttgggagc 1109 0.0107627036925945 0.181818181818182 2 11 3 14 BG069541 all_est chr4 122403918 + 96951 graph_last 0 56 gtggttgaaa 1110 0.0107627036925945 0.181818181818182 2 11 3 14 agtcctggat 1111 0.0109251678709062 0.214285714285714 3 14 5 17 genomic chrM 1072 - 0 unique_long l 20 60 aaatcttctg 1112 0.0109517673460467 Inf 8 0 15 0 AK052981 knownGene chr5 5862355 + 100261 graph_last 0 41 aacctgtcca 1113 0.0109517673460467 Inf 8 0 15 0 NM_009104 refGene chr12 19161361 + 26608 graph_last 1 20 aactgacata 1114 0.0109517673460467 0 0 6 0 8 NM_009181 refGene chr7 66520103 - 122093 graph_last 0 22 aagccctccc 1115 0.0109517673460467 0 0 6 0 8 NM_008595 refGene chr15 80100474 - 48342 graph_last 1 16 aaggaaaggc 1116 0.0109517673460467 0 0 6 0 8 aagttttcag 1117 0.0109517673460467 0.1 1 10 2 12 aataaatacc 1118 0.0109517673460467 Inf 8 0 15 0 NM_008226 refGene chr10 82039431 + 13984 graph_last l 23 87 aatgtactga 1119 0.0109517673460467 Inf 8 0 15 0 acaaaataaa 1120 0.0109517673460467 6 12 2 22 2 NM_026785 refGene chr2 165384134 + 81312 graph_last 1 19 acatctggtg 1121 0.0109517673460467 0 0 6 0 8 NM_008169 refGene chr2 25557785 - 72823 graph_last l 60 152 actagctctc 1122 0.0109517673460467 6 12 2 22 2 NM_011670 refGene chr5_random 2617542 - 109059 graph_second l 9 21 actccgtggc 1123 0.0109517673460467 0 0 6 0 8 actctttcct 1124 0.0109517673460467 Inf 8 0 15 0 agcacgaccc 1125 0.0109517673460467 0 0 6 0 8 NM_017392 refGene chr3 111532090 - 88311 graph_second 0 12 agcatcaagg 1126 0.0109517673460467 0 0 6 0 8 NM_008687 refGene chr4 80899931 + 94453 graph_last l 2 27 agctggtggt 1127 0.0109517673460467 0.1 1 10 2 12 NM_011101 refGene chr11 107597322 - 24724 graph_last l 33 66 atccgctctg 1128 0.0109517673460467 6 12 2 22 2 NM_007944 refGene chr8 72752711 - 131158 graph_last l 8 46 atgtatgcat 1129 0.0109517673460467 0 0 6 0 8 NM_027287 refGene chr3 156132299 + 90410 graph_last 1 10 attccagcca 1130 0.0109517673460467 0 0 6 0 8 BQ175143 all_est chr4 56709743 - 93445 graph_last l 30 56 atttgaaaat 1131 0.0109517673460467 Inf 8 0 15 0 NM_009870 refGene chr10 130337460 + 16653 graph_second 0 10 caaactgcat 1132 0.0109517673460467 0 0 6 0 8 NM_008687 refGene chr4 80902877 + 94453 graph_last 1 12 cagaggtaac 1133 0.0109517673460467 0 0 6 0 8 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 1134 0.0109517673460467 0 0 6 0 8 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 1135 0.0109517673460467 Inf 8 0 15 0 ccaaacgtgt 1136 0.0109517673460467 0.1 1 10 2 12 NM_016711 refGene chr9 78092876 - 139564 graph_last l 48 96 ccactggtca 1137 0.0109517673460467 6 12 2 22 2 ccagccagcg 1138 0.0109517673460467 0.1 1 10 2 12 NM_009238 refGene chr13 28837201 + 33570 graph_last 0 19 ccataggact 1139 0.0109517673460467 0 0 6 0 8 AK045487 all_mrna chr7 54138162 + 121513 graph_last l 18 38 ccatcattaa 1140 0.0109517673460467 Inf 8 0 15 0 cccactggat 1141 0.0109517673460467 Inf 8 0 15 0 NM_008241 refGene chr12 44849211 + 27632 graph_last 0 13 cctaaatttt 1142 0.0109517673460467 0 0 6 0 8 cctgcaggtc 1143 0.0109517673460467 0 0 6 0 8 NM_145585 refGene chr7 111695615 - 124695 graph_last l 7 26 cctgtcctgc 1144 0.0109517673460467 0 0 6 0 8 cctttggcaa 1145 0.0109517673460467 0.461538461538462 18 39 34 49 cggcagacag 1146 0.0109517673460467 0 0 6 0 8 NM_183018 refGene chr1 22444413 - 897 graph_last l 15 28 ctagtgagag 1147 0.0109517673460467 Inf 8 0 15 0 genomic chr11 53174549 + 0 unique_long l 30 50 ctcattataa 1148 0.0109517673460467 Inf 8 0 15 0 NM_139153 refGene chr5 22701753 - 101135 graph_last b 31 122 ctcggtgccg 1149 0.0109517673460467 Inf 8 0 15 0 NM_023134 refGene chr14 35775081 + 40665 graph_last 0 51 ctgtcagtgg 1150 0.0109517673460467 0.1 1 10 2 12 NM_019840 refGene chr4 101465240 + 95522 graph_last l 20 39 ctgtcttgcc 1151 0.0109517673460467 Inf 8 0 15 0 NM_033444 refGene chr17 34714269 + 58915 graph_last l 3 15 ctgtgccctc 1152 0.0109517673460467 0 0 6 0 8 NM_009723 refGene chr6 115508288 - 116175 graph_last l 16 55 ctgtttgaac 1153 0.0109517673460467 Inf 8 0 15 0 AK079373 all_mrna chr7 39322099 + 120861 graph_last l 21 42 cttgtgaccc 1154 0.0109517673460467 Inf 8 0 15 0 NM_009503 refGene chr4 42269923 - 92606 graph_last 6 49 cttttgagtt 1155 0.0109517673460467 0 0 6 0 8 NM_010110 refGene chrX 88985507 + 150221 graph_last l 4 32 gaaggagctg 1156 0.0109517673460467 0.1 1 10 2 12 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 1157 0.0109517673460467 0.535714285714286 30 56 56 70 X57780 knownGene chrM 11082 - 142531 graph_second l 38 75 gagtttggat 1158 0.0109517673460467 6 12 2 22 2 NM_198615 refGene chr10 82726391 - 14085 graph_last 1 17 gattgtgctg 1159 0.0109517673460467 0 0 6 0 8 NM_008399 refGene chr11 72718650 - 21356 graph_last 0 58 gcaaactggg 1160 0.0109517673460467 Inf 8 0 15 0 gcacactgtg 1161 0.0109517673460467 0 0 6 0 8 NM_175934 refGene chr17 35596909 - 59004 graph_last 1 20 gccaaagctt 1162 0.0109517673460467 0 0 6 0 8 gcctcctggg 1163 0.0109517673460467 0 0 6 0 8 NM_183216 refGene chr19 44402360 + 70020 graph_last l 14 49 gctctcctgg 1164 0.0109517673460467 Inf 8 0 15 0 NM_011123 refGene chrX 125410331 - 151562 graph_last l 63 147 ggaccgtaca 1165 0.0109517673460467 Inf 8 0 15 0 NM_177305 refGene chr1 90626675 - 4509 graph_last 3 24 ggggagttcc 1166 0.0109517673460467 0 0 6 0 8 AK014916 all_mrna chr9 51496996 - 137503 graph_last 0 69 ggtgtacata 1167 0.0109517673460467 Inf 8 0 15 0 NM_008842 refGene chr17 29127747 + 58363 graph_second 3 13 gtagcctgca 1168 0.0109517673460467 0 0 6 0 8 NM_172473 refGene chr10 47362986 + 12180 graph_last l 19 95 gtataaagtt 1169 0.0109517673460467 6 12 2 22 2 NM_025735 refGene chr2 155902833 + 80638 graph_second 7 22 gtctacgcct 1170 0.0109517673460467 0 0 6 0 8 AK129143 knownGene chr18 78784890 - 66286 graph_last l 2 17 gtcttagatg 1171 0.0109517673460467 0 0 6 0 8 gtgacagttt 1172 0.0109517673460467 Inf 8 0 15 0 gtggggttct 1173 0.0109517673460467 0 0 6 0 8 NM_013783 refGene chr4 153012039 - 99695 graph_last l 33 122 gtgtgccgct 1174 0.0109517673460467 6 12 2 23 2 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 1175 0.0109517673460467 0 0 6 0 8 NM_008426 refGene chr2 55798837 + 74671 graph_last l 38 59 tacttgcagt 1176 0.0109517673460467 Inf 8 0 15 0 tagttttgtc 1177 0.0109517673460467 6 12 2 22 2 BU522970 all_est chr11 98436544 + 23692 graph_last l 42 77 tatgttgttc 1178 0.0109517673460467 Inf 8 0 15 0 tcccctcctg 1179 0.0109517673460467 Inf 8 0 15 0 NM_025650 refGene chr10 82754685 - 14090 graph_last l 6 34 tctgtttctg 1180 0.0109517673460467 0 0 6 0 8 NM_145839 refGene chr5 98390761 - 105044 graph_last l 4 27 tcttaaccgt 1181 0.0109517673460467 0.1 1 10 2 12 tcttaatgaa 1182 0.0109517673460467 2.16666666666667 39 18 72 22 tgaggaaatg 1183 0.0109517673460467 0 0 6 0 8 tgctcccaag 1184 0.0109517673460467 Inf 8 0 15 0 AK122475 knownGene chr10 19315111 - 10688 graph_last l 16 35 tgctgctcct 1185 0.0109517673460467 Inf 8 0 15 0 tgctttgatt 1186 0.0109517673460467 Inf 8 0 15 0 tggaggaatg 1187 0.0109517673460467 0 0 6 0 8 tggcctccct 1188 0.0109517673460467 0 0 6 0 8 tgggaaatcg 1189 0.0109517673460467 0 0 6 0 8 NM_007477 refGene chr11 103649160 + 24264 graph_last l 16 102 tggtgattgg 1190 0.0109517673460467 0.1 1 10 2 12 genomic chr4 137237393 + 0 unique_long l 21 25 tggttgtctc 1191 0.0109517673460467 Inf 8 0 15 0 tgtatgtgtt 1192 0.0109517673460467 6 12 2 22 2 NM_174988 refGene chr2 165725310 - 81357 graph_last l 28 62 tgtcaagttg 1193 0.0109517673460467 Inf 8 0 15 0 NM_011368 refGene chr3 91659069 - 86819 graph_last 1 41 ttacaagcct 1194 0.0109517673460467 0 0 6 0 8 NM_153792 refGene chr17 24122411 + 57802 graph_last s 2 25 ttgagtcggc 1195 0.0109517673460467 0 0 6 0 8 NM_010398 refGene chr17 34913504 + 58954 graph_last l 34 154 ccagaggact 1196 0.0115343666368550 0.363636363636364 8 22 14 28 AK084022 knownGene chr11 60723328 - 20505 graph_last l 38 149 tgaacctgag 1197 0.0115343666368550 0.363636363636364 8 22 14 28 ggaggtgtgc 1198 0.0118501399717315 0.166666666666667 2 12 4 15 BC019560 knownGene chr10 130328662 - 16651 graph_last l 7 58 ggggaagggc 1199 0.0118501399717315 0.166666666666667 2 12 4 15 gtttcattat 1200 0.0118501399717315 0.166666666666667 2 12 4 15 BC021511 knownGene chr2 105018789 - 77566 graph_last l 8 33 tacggaaatg 1201 0.0118501399717315 0.166666666666667 2 12 4 15 NM_027882 refGene chr7 28683135 + 120189 graph_last l 11 77 tgcaatattt 1202 0.0118501399717315 0.166666666666667 2 12 4 15 NM_019431 refGene chr11 107397888 - 24662 graph_second l 9 66 tggcctttga 1203 0.0118501399717315 0.166666666666667 2 12 4 15 NM_010886 refGene chr6 11641539 - 110340 graph_last 134 387 ttgatttttt 1204 0.0119176975579555 2.38461538461538 31 13 58 16 NM_009705 refGene chr12 75146462 - 29266 graph_last l 40 79 atgtctaagc 1205 0.0119911873023646 7 14 2 25 3 NM_011522 refGene chr17 24278928 - 57816 graph_last l 31 63 attgtgtatt 1206 0.0119911873023646 10 10 1 19 1 cacaatgtga 1207 0.0119911873023646 10 10 1 19 1 cagcgagctg 1208 0.0119911873023646 0.125 1 8 1 10 gagatgctgg 1209 0.0119911873023646 0.125 1 8 1 10 NM_130889 refGene chr4 45761824 + 92901 graph_last 11 52 gatttggtag 1210 0.0119911873023646 0.125 1 8 1 10 NM_146211 refGene chr8 71964040 - 131093 graph_last l 54 104 gcgttgagat 1211 0.0119911873023646 7 14 2 25 3 NM_145939 refGene chr16 20229070 - 52176 graph_last 1 32 ggtggaacgg 1212 0.0119911873023646 0.125 1 8 1 10 gtgagcttgt 1213 0.0119911873023646 0.125 1 8 1 10 NM_139272 refGene chr8 126141377 + 134336 graph_last 3 36 gtggccagtg 1214 0.0119911873023646 0.125 1 8 1 10 NM_152895 refGene chr1 137538600 + 6443 graph_last 2 24 taattcagga 1215 0.0119911873023646 0.125 1 8 1 10 NM_007583 refGene chr15 79340498 - 48301 graph_last l 21 39 tacaccctca 1216 0.0119911873023646 10 10 1 19 1 NM_198111 refGene chr12 48649939 + 27846 graph_last l 44 78 tagagaggtg 1217 0.0119911873023646 10 10 1 19 1 tatccagttg 1218 0.0119911873023646 0.125 1 8 1 10 tcaagaacaa 1219 0.0119911873023646 10 10 1 19 1 tcaagatgat 1220 0.0119911873023646 0.125 1 8 1 10 AK129151 knownGene chr3 104498123 - 87776 graph_last 2 28 tgcagtcagt 1221 0.0119911873023646 0.125 1 8 1 10 genomic chr18 36478939 + 0 unique_long l 36 52 tgctttataa 1222 0.0119911873023646 10 10 1 19 1 NM_010214 refGene chr10 87419912 + 14481 graph_last 0 64 tggctataag 1223 0.0119911873023646 10 10 1 19 1 NM_008783 refGene chr1 171868719 - 8300 graph_last l 3 29 tggttggaca 1224 0.0119911873023646 0.125 1 8 1 10 NM_010327 refGene chr16 18226867 - 52048 graph_last l 220 602 ctccgttttg 1225 0.0126923378046195 1.92592592592593 52 27 96 34 NM_172275 refGene chr5 120112769 - 106607 graph_last l 26 94 aggacggagg 1226 0.0129938907473276 0.235294117647059 4 17 8 21 NM_007505 refGene chr18_random 17402584 - 67097 graph_last l 317 544 gatagataat 1227 0.0130116567028948 1.96 49 25 91 32 aaaagaaata 1228 0.0130380622330214 5 15 3 28 4 NM_172271 refGene chr3 110606742 - 88220 graph_last l 79 150 aggcattgtc 1229 0.0130380622330214 5 15 3 28 4 NM_010864 refGene chr9 77762942 + 139524 graph_last l 39 101 agtttttcac 1230 0.0130380622330214 5 15 3 28 4 AK078240 knownGene chr2 59495398 + 74840 graph_last l 116 162 gaagaataat 1231 0.0130380622330214 5 15 3 28 4 gcgaaggctg 1232 0.0130925848423832 0.315789473684211 6 19 11 24 tttttggtgt 1233 0.0130925848423832 0.315789473684211 6 19 11 24 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 1234 0.0132106953024621 2.6 26 10 48 12 NM_018801 refGene chr19 10374071 + 67978 graph_last l 64 194 ggggaggttg 1235 0.0132150813313721 3.33333333333333 20 6 36 7 NM_025899 refGene chr7 112711791 + 124751 graph_last l 123 238 cgtgtattta 1236 0.0134849118531597 2.7 27 10 49 12 ggaagatgct 1237 0.0135148841123157 0.511111111111111 23 45 42 56 ctctgttttc 1238 0.0137322987894650 3.6 18 5 33 6 NM_133195 refGene chr18 26104576 - 63468 graph_last l 50 115 acataaagat 1239 0.0141562591641612 3.6 18 5 34 6 gtggcacaca 1240 0.0144033357481511 0.36 9 25 17 31 aagcctcatt 1241 0.0144639560094587 0.266666666666667 4 15 7 19 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 1242 0.0144639560094587 2.35714285714286 33 14 60 17 NM_145130 refGene chr6 126639248 + 116885 graph_last l 14 119 ccaggaattc 1243 0.0144639560094587 0.266666666666667 4 15 7 19 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 1244 0.0144639560094587 0.266666666666667 4 15 7 19 gcctctggtg 1245 0.0144639560094587 0.266666666666667 4 15 7 19 NM_175172 refGene chr19 58909380 - 70889 graph_last l 13 83 gggaattaaa 1246 0.0144639560094587 0.266666666666667 4 15 7 19 aagacccacc 1247 0.0158431214689983 2.875 23 8 43 10 NM_009790 refGene chr12 95767977 - 30604 graph_last b 49 69 acgtggcgca 1248 0.0159956787991487 5.5 11 2 21 2 genomic chr12 95770479 - 0 unique_long l 21 70 caggattcct 1249 0.0159956787991487 5.5 11 2 21 2 NM_016909 refGene chr8 126836338 + 134395 graph_last l 47 96 cctggtaagt 1250 0.0159956787991487 5.5 11 2 21 2 BB611372 all_est chr13 41323731 + 34238 graph_last 0 159 ggttgtatgt 1251 0.0159956787991487 5.5 11 2 21 2 tagacaaagg 1252 0.0159956787991487 5.5 11 2 21 2 NM_130862 refGene chr11 119555369 + 25505 graph_last l 56 104 tgcaatggat 1253 0.0159956787991487 5.5 11 2 21 2 NM_009250 refGene chr3 77282203 + 85987 graph_last l 39 54 ttattgtaca 1254 0.0159956787991487 5.5 11 2 21 2 NM_145385 refGene chr6 126864632 + 116927 graph_last l 150 428 gtcctataag 1255 0.0161297894561863 2.38461538461538 31 13 57 16 NM_013559 refGene chr5 148461615 - 108790 graph_last l 171 343 tgatcattgt 1256 0.0165585533582875 2.7 27 10 50 13 gcctccaagg 1257 0.0175969147869678 0.738636363636364 130 176 240 221 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 1258 0.0176385412877131 0.380952380952381 8 21 14 27 NM_009685 refGene chr7 97689819 - 123899 graph_last 148 378 gatcccctct 1259 0.0176511905995285 2.1875 35 16 65 20 aagcagcagc 1260 0.017713760854422 0.230769230769231 3 13 5 16 CD350194 all_est chr6 32019643 - 111398 graph_last l 10 51 aatgggtgaa 1261 0.017713760854422 0.230769230769231 3 13 5 16 NM_026467 refGene chr9 69425322 + 138888 graph_last l 20 143 cacagactgt 1262 0.017713760854422 0.230769230769231 3 13 5 16 ccattttctg 1263 0.017713760854422 0.230769230769231 3 13 5 16 ctccagggca 1264 0.017713760854422 0.230769230769231 3 13 5 16 ctgtacgcag 1265 0.017713760854422 0.230769230769231 3 13 5 16 NM_023336 refGene chr2 27723480 - 73019 graph_last l 9 47 gaggcgcctg 1266 0.017713760854422 0.230769230769231 3 13 5 16 NM_024223 refGene chr12 108767448 + 31489 graph_last l 23 108 gctatggaga 1267 0.017713760854422 0.230769230769231 3 13 5 16 NM_146019 refGene chr11 68914658 - 21006 graph_last l 49 176 gggaaccccc 1268 0.0177484892354353 0.4 10 25 18 32 NM_175692 refGene chr2 159008474 - 80939 graph_last l 12 31 aagttttagt 1269 0.0179888589762521 Inf 7 0 13 0 NM_013779 refGene chr7 54897124 + 121558 graph_last 0 27 acagcgatga 1270 0.0179888589762521 Inf 7 0 13 0 NM_018790 refGene chr15 76371832 - 48009 graph_last l 26 41 acccatactc 1271 0.0179888589762521 Inf 7 0 13 0 accttggaag 1272 0.0179888589762521 Inf 7 0 13 0 NM_133772 refGene chr8 70864910 - 130960 graph_last l 25 42 agcgtgtgat 1273 0.0179888589762521 Inf 7 0 13 0 NM_011245 refGene chr9 92411079 + 140177 graph_last l 26 69 aggctgttct 1274 0.0179888589762521 Inf 7 0 13 0 AK034974 all_mrna chr2 53183992 + 74573 graph_last 0 77 atgttaaaaa 1275 0.0179888589762521 0.2 2 10 3 13 attggcccca 1276 0.0179888589762521 Inf 7 0 13 0 NM_013568 refGene chr6 128662313 - 117040 graph_last l 18 35 caccaccttg 1277 0.0179888589762521 Inf 7 0 13 0 NM_008113 refGene chr17 25805275 + 57991 graph_last l 39 44 cagctcccaa 1278 0.0179888589762521 Inf 7 0 13 0 ccatctctgc 1279 0.0179888589762521 Inf 7 0 13 0 genomic chr4 122148722 + 0 unique_long l 15 19 ccctctggaa 1280 0.0179888589762521 Inf 7 0 13 0 NM_053195 refGene chr2 145714218 + 79909 graph_last l 28 81 cttgttacac 1281 0.0179888589762521 Inf 7 0 13 0 genomic chr19 23311685 + 0 unique_long l 14 27 ctttctgata 1282 0.0179888589762521 Inf 7 0 13 0 gaccgtggtg 1283 0.0179888589762521 0.2 2 10 3 13 NM_178624 refGene chr9 116584101 + 141769 graph_last l 13 60 gcaccagcag 1284 0.0179888589762521 0.2 2 10 3 13 gcagtttgct 1285 0.0179888589762521 Inf 7 0 13 0 gctaagttcc 1286 0.0179888589762521 Inf 7 0 13 0 gctcctgagg 1287 0.0179888589762521 Inf 7 0 13 0 gctgccctaa 1288 0.0179888589762521 0.2 2 10 3 13 NM_153803 refGene chr9 27407141 + 135957 graph_last l 52 167 ggcaaaggct 1289 0.0179888589762521 0.391304347826087 9 23 16 29 NM_009338 refGene chr17 13147732 + 57147 graph_last l 4 60 gggattcggc 1290 0.0179888589762521 0.2 2 10 3 13 NM_010825 refGene chr2 116133600 - 78189 graph_last l 25 76 gggtcctctt 1291 0.0179888589762521 0.294117647058824 5 17 9 21 ggttttgttt 1292 0.0179888589762521 0.2 2 10 3 13 NM_026156 refGene chr8 3587661 - 127592 graph_last l 11 54 gtcactcccc 1293 0.0179888589762521 0.2 2 10 3 13 BF721816 all_est chr5_random 18762523 - 109358 graph_last l 10 50 gttgtttctc 1294 0.0179888589762521 0.2 2 10 3 13 taacaggaaa 1295 0.0179888589762521 Inf 7 0 13 0 NM_008251 refGene chr16 98082681 - 56348 graph_last l 29 115 taataaaaat 1296 0.0179888589762521 0.294117647058824 5 17 9 21 NM_009722 refGene chr5 121481038 - 106753 graph_last l 11 30 tacagtgttc 1297 0.0179888589762521 Inf 7 0 13 0 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 1298 0.0179888589762521 Inf 7 0 13 0 tcccaggtcc 1299 0.0179888589762521 Inf 7 0 13 0 NM_007794 refGene chr8 107045121 - 132995 graph_last l 66 88 tccctcctta 1300 0.0179888589762521 6.5 13 2 24 3 NM_183187 refGene chr14 3582144 - 38877 graph_second l 11 16 tctaacacac 1301 0.0179888589762521 Inf 7 0 13 0 NM_018799 refGene chr4 128521019 + 97495 graph_last l 28 66 tctatctcag 1302 0.0179888589762521 6.5 13 2 24 3 NM_009412 refGene chr3 9003362 - 82969 graph_last l 35 67 tgaaaatctt 1303 0.0179888589762521 Inf 7 0 13 0 tgaaataaaa 1304 0.0179888589762521 0.294117647058824 5 17 9 21 tgatgaaatg 1305 0.0179888589762521 Inf 7 0 13 0 NM_009295 refGene chr2 33060457 - 73476 graph_last l 126 428 tggggtttcc 1306 0.0179888589762521 2.41666666666667 29 12 54 15 tgtataaata 1307 0.0179888589762521 Inf 7 0 13 0 NM_175400 refGene chr2 4826964 + 71584 graph_last l 4 73 ttggaaccct 1308 0.0179888589762521 0.2 2 10 3 13 tttaagaatt 1309 0.0179888589762521 Inf 7 0 13 0 NM_023168 refGene chr15 77451239 + 48079 graph_last l 216 503 tttcaaggga 1310 0.0179888589762521 2.41666666666667 29 12 54 15 aaaaaaataa 1311 0.0184320773611132 9 9 1 17 1 genomic chrX 52918661 - 0 unique_long l 1 769 aaaaatcatc 1312 0.0184320773611132 Inf 8 0 14 0 aaggtgagac 1313 0.0184320773611132 Inf 8 0 14 0 NM_012038 refGene chr12 11533918 - 26294 graph_last l 20 42 agaatgtcat 1314 0.0184320773611132 Inf 8 0 14 0 NM_024495 refGene chr3 15111673 + 83194 graph_last l 63 134 agacaaactg 1315 0.0184320773611132 9 9 1 17 1 NM_172498 refGene chr14 57879889 + 42254 graph_last l 18 42 agagaggagg 1316 0.0184320773611132 Inf 8 0 14 0 NM_199301 refGene chr7 132043018 - 125964 graph_last l 23 264 atgaaacttt 1317 0.0184320773611132 Inf 8 0 14 0 atgaaataaa 1318 0.0184320773611132 Inf 8 0 14 0 NM_016866 refGene chr2 68553403 - 75378 graph_second 0 34 atgtagttat 1319 0.0184320773611132 9 9 1 17 1 AA797988 all_est chr2 135617563 + 79471 graph_last l 34 60 atgtttcttc 1320 0.0184320773611132 Inf 8 0 14 0 NM_152915 refGene chr1 86195624 + 4126 graph_last l 3 31 cacagaataa 1321 0.0184320773611132 Inf 8 0 14 0 cacagctctg 1322 0.0184320773611132 9 9 1 17 1 cataatgaat 1323 0.0184320773611132 9 9 1 17 1 NM_008791 refGene chr16 98535934 - 56369 graph_last l 44 56 catttcaggt 1324 0.0184320773611132 Inf 8 0 14 0 ccattggttt 1325 0.0184320773611132 Inf 8 0 14 0 AK085540 all_mrna chr13 97651878 + 37302 graph_last 0 31 cccacctgac 1326 0.0184320773611132 Inf 8 0 14 0 cgcaggcacc 1327 0.0184320773611132 9 9 1 17 1 NM_177664 refGene chr3 120658581 - 88683 graph_last l 26 37 cggtattata 1328 0.0184320773611132 9 9 1 17 1 NM_020269 refGene chr1 176231647 + 8558 graph_last l 55 111 ctagctaacc 1329 0.0184320773611132 Inf 8 0 14 0 ctgttaatac 1330 0.0184320773611132 9 9 1 17 1 genomic chrM 5512 + 0 unique_long l 189 661 cttttgttat 1331 0.0184320773611132 Inf 8 0 14 0 NM_010638 refGene chr19 23313418 + 68718 graph_last l 35 62 gaaaatctac 1332 0.0184320773611132 Inf 8 0 14 0 gagacca