gene_id gene_type chromosome position strand clusternumber search_method unique_on_genome ltag_abundance stag_abundance TAG TAG.Num DIFF.P Ratio COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.per.100000 COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.per.100000 COUNT_NeoLHLS1_C.COUNT_NeoLHLS1_P.COUNT_NeoLHLS2.COUNT_NeoRHLS_C.COUNT_NeoRHLS_A.COUNT_NeoRHLS1_C.COUNT_NeoRHLS1_A.TAG.count COUNT_E15_S.COUNT_E15_C.COUNT_E15ant.COUNT_E15_P.TAG.count NM_177188 refGene chr15_random 18413017 + 50810 graph_last 267 3986 gctgccctag 1 0 0.0522088353413655 65 1245 125 1626 NM_007807 refGene chrX 7985921 - 147160 graph_last 0 12115 ataatacata 2 1.40906585202032e-205 Inf 482 0 932 0 NM_016916 refGene chr2 158187789 + 80890 graph_last l 40 812 gggggagtgg 3 1.00441963230079e-146 0.0260869565217391 9 345 18 451 tcggacgtac 4 1.61027364376936e-137 Inf 324 0 627 0 NM_011655 refGene chr17 35502124 - 58992 graph_last 171 1959 gcaggcactc 5 1.12252778878822e-134 0.0808823529411765 33 408 64 533 NM_022029 refGene chr9 38324022 - 136533 graph_last l 730 1545 cagctctgcc 6 5.99733396895133e-95 231 231 1 447 1 NM_011428 refGene chr2 136924791 + 79540 graph_last l 1065 1589 tatattaaat 7 4.35302898691877e-92 41.8333333333333 251 6 485 8 AK007352 knownGene chr4 137235208 + 98340 graph_last l 535 956 cggtctagtc 8 2.75706318286853e-84 72.6666666666667 218 3 422 4 tgggttgtct 9 1.23563365143322e-82 0.160458452722063 56 349 109 456 NM_021273 refGene chr12 107236718 - 31356 graph_last l 1098 2751 catccttgat 10 5.44992946220181e-77 9.51612903225806 295 31 570 41 NM_019634 refGene chrX 9144283 + 147217 graph_last l 833 1167 tattaataaa 11 6.97167649135141e-76 Inf 181 0 350 0 NM_010777 refGene chr18 82283576 + 66444 graph_last l 1114 3718 gcttcgtcca 12 2.22164610744948e-70 173 173 1 335 1 AK003178 knownGene chr3 88749541 - 86498 graph_last 146 1157 ggggaaatcg 13 9.56528754739913e-69 0.146520146520147 40 273 77 357 aggcagacag 14 3.14348514548684e-68 0.263403263403263 113 429 218 560 NM_019498 refGene chr2 28483400 + 73055 graph_last l 738 1036 taactttaag 15 1.47381616345035e-66 24.375 195 8 377 10 aatgacctgg 16 2.16427443257689e-66 0.0258064516129032 4 155 7 202 NM_007438 refGene chr7_random 37881398 + 127284 graph_last 511 1186 cctactaacc 17 1.16374575639632e-64 19.8 198 10 383 13 NM_007393 refGene chr5 141627625 - 108227 graph_last 67 1238 gatacttgga 18 5.30969050334023e-62 0.123893805309735 28 226 54 295 tgaccccggg 19 2.4229394470818e-52 0.176470588235294 42 238 82 311 NM_008131 refGene chr1 157364405 + 7351 graph_last l 557 852 tatagtatgt 20 5.10812213036075e-52 130 130 1 252 1 caaaacaggc 21 1.38295620403372e-51 66.5 133 2 257 2 NM_027219 refGene chr15 80189480 + 48347 graph_last 0 1468 tcattggtcg 22 1.90755258288861e-49 19.125 153 8 295 10 NM_009846 refGene chr10 45183755 + 12083 graph_last 14 421 ttatggaatt 23 5.51095530959118e-48 0.0099009900990099 1 101 1 132 AK007352 knownGene chr4 137234621 + 98340 graph_second l 344 642 accgacaagg 24 1.06576107046807e-43 22.1666666666667 133 6 257 8 NM_175692 refGene chr2 159011790 + 80939 graph_last l 664 956 ccttaccgct 25 1.33899511823880e-43 31 124 4 240 5 NM_010097 refGene chr5 103193388 - 105359 graph_last l 851 1707 ctgaggaagt 26 1.75610790687393e-43 15.8888888888889 143 9 276 12 NM_009238 refGene chr13 28837064 - 33570 graph_last 3 219 acaggcacga 27 2.33109531582620e-43 0.0108695652173913 1 92 1 120 NM_009721 refGene chr1 167482216 + 7965 graph_last l 221 404 attttcgagg 28 3.16387572367648e-42 Inf 103 0 199 0 cgccgccggc 29 8.7977672059904e-42 0.182291666666667 35 192 67 251 gccaagtgga 30 1.73775408412484e-40 0.178378378378378 33 185 64 242 taaagaggcc 31 6.32398293430754e-40 0.135483870967742 21 155 41 202 NM_011123 refGene chrX 125410335 + 151562 graph_last 0 1107 aaattattgg 32 1.18223274435725e-39 37 111 3 215 4 gtatttgcaa 33 2.30660856408145e-38 52.5 105 2 203 3 gctgccctcc 34 4.83661075207034e-38 Inf 93 0 179 0 NM_144900 refGene chr3 104607706 - 87782 graph_last l 365 490 tagctgtaac 35 7.00376429474495e-38 50 100 2 194 2 NM_145425 refGene chr11 21455958 - 18147 graph_last l 931 1748 ttgttagtgc 36 1.42402313364206e-37 7.1304347826087 164 23 318 30 NM_009115 refGene chr10 78400011 + 13741 graph_second 0 1628 gtgaccacgg 37 1.96332338589558e-37 15.625 125 8 241 11 AK084468 all_mrna chr5_random 7786726 - 109151 graph_last 0 188 gcactgttaa 38 1.02962120024693e-36 0.0238095238095238 2 84 3 110 NM_008220 refGene chr7 95961219 - 123777 graph_last 166 1031 tggatcctga 39 3.95130754574136e-36 0.150684931506849 22 146 42 191 gtgaaactaa 40 5.38501471506934e-36 0.116279069767442 15 129 29 168 tagatatagg 41 1.27611022548682e-35 5.07894736842105 193 38 373 50 genomic chr2 103005141 + 0 unique_long l 172 342 caggtgagcc 42 4.54063059795853e-35 90 90 1 174 1 NM_009238 refGene chr13 28838650 - 33570 graph_last l 6 142 gggacctcgt 43 5.80612603375051e-35 0.0133333333333333 1 75 1 98 NM_019549 refGene chr11 17098989 + 17866 graph_last l 655 903 ttgtgaaatc 44 6.19037436344534e-35 14.75 118 8 228 11 ttggtgaagg 45 7.28900928845076e-34 0.36969696969697 122 330 236 431 NM_009238 refGene chr13 28836829 - 33570 graph_last l 4 199 ccagctaatc 46 1.30884607661048e-33 0 0 69 0 90 NM_009234 refGene chr12 21785186 + 26716 graph_last 1 124 tggaggctcc 47 7.88436333868724e-33 0 0 67 0 88 NM_009382 refGene chr9 45815824 + 137031 graph_last l 437 725 tataatacca 48 4.17454281127402e-32 83 83 1 160 1 ctgaacatct 49 9.72154303479597e-32 0.115044247787611 13 113 25 147 tctggacgcg 50 1.27540101959105e-31 0.0140845070422535 1 71 2 93 tgtactcaat 51 8.80301591371634e-31 0.111111111111111 12 108 23 141 NM_009468 refGene chr18 43989922 - 64437 graph_last 0 158 tatgatggac 52 4.1238894632387e-30 0 0 62 0 81 NM_023051 refGene chr4 147761803 + 99301 graph_last l 204 510 tcctgtcccc 53 8.1888027992372e-30 10.9 109 10 211 13 ccccagccag 54 4.10660515108566e-29 0.217948717948718 34 156 66 204 ggatttggct 55 9.07746624036151e-29 0.245614035087719 42 171 82 224 tccctgtagt 56 1.21166123177909e-28 Inf 71 0 137 0 gtgacctggc 57 2.19656163740862e-28 74 74 1 144 1 atactgacat 58 2.22838815667713e-28 Inf 70 0 136 0 gttgctgaga 59 1.16556636621576e-27 0.198529411764706 27 136 52 178 ggcaagcccc 60 1.19877027685859e-27 0.288659793814433 56 194 108 253 aaaaaaaaaa 61 1.86300765806367e-27 0.383802816901408 109 284 211 371 NM_009468 refGene chr18 43985286 - 64437 graph_last l 5 199 gtgtgtgggt 62 2.51738315837526e-27 0.0166666666666667 1 60 1 78 gggttggccg 63 3.30711417004211e-27 37 74 2 144 2 aggaaggcgg 64 6.60392445065698e-27 0.201492537313433 27 134 52 175 cccttcttct 65 8.3957108757707e-27 0.163793103448276 19 116 37 152 NM_177407 refGene chr18 61114313 + 65252 graph_last l 176 327 actttatatg 66 2.36538070086432e-26 38 76 2 146 3 gtctgctgat 67 2.6882470415058e-26 0.150943396226415 16 106 30 139 NM_009234 refGene chr12 21786977 + 26716 graph_last 1 196 gtgagtgttt 68 3.37524074888232e-26 0.0175438596491228 1 57 1 75 gattccgtga 69 4.61486086341239e-26 0.253164556962025 40 158 77 207 tggatcagtc 70 1.17660990904286e-25 0.236486486486486 35 148 68 193 NM_008258 refGene chr11 115003044 - 25097 graph_last 24 285 gagaaagtct 71 1.50815046530657e-25 0.0327868852459016 2 61 3 80 ccttgctcaa 72 1.94589992218620e-25 7.4 111 15 215 20 NM_009513 refGene chr13 25140178 - 33437 graph_last 262 360 taattttcca 73 2.69918046293190e-25 67 67 1 129 1 tactcattat 74 3.28106402178216e-25 9.7 97 10 187 13 genomic chr4 137235203 - 0 unique_long l 168 283 tcacatccaa 75 4.84382807218987e-25 66 66 1 128 1 NM_173781 refGene chr9 105684751 + 140958 graph_last l 395 705 ttggtcaaac 76 1.18291227768196e-24 12.4285714285714 87 7 168 9 cctttgtgac 77 2.33239521908126e-24 8.41666666666667 101 12 195 16 NM_008228 refGene chr4 128429122 + 97479 graph_last l 21 193 tctctgactt 78 3.25229302916145e-24 0.0476190476190476 3 63 5 82 aggtcgggtg 79 3.39243949424692e-24 0.214285714285714 27 126 52 165 agaaggaggt 80 4.64738612082535e-24 0.269230769230769 42 156 81 204 cagcatcacc 81 2.76596721896065e-23 0.0476190476190476 3 63 6 82 NM_025650 refGene chr10 82748131 - 14090 graph_last l 624 1104 ttgacagaca 82 3.46521527774673e-23 7.21428571428571 101 14 196 18 NM_008241 refGene chr12 44828389 + 27632 graph_last l 18 185 gagctatctg 83 5.07827202428173e-23 0.0344827586206897 2 58 4 76 tgactgggag 84 5.08225306755668e-23 Inf 57 0 111 0 NM_010239 refGene chr19 9869099 + 67950 graph_last l 1046 3239 tcaggctgcc 85 5.470934948406e-23 3.30357142857143 185 56 357 73 NM_031161 refGene chr9 123874771 - 142246 graph_last l 216 431 ggctggatgg 86 6.32169352966865e-23 32 64 2 124 2 NM_013492 refGene chr14 57708245 + 42245 graph_last l 424 804 tctccaggcg 87 6.32169352966865e-23 32 64 2 124 2 ccctgggttc 88 9.65572959053962e-23 0.257142857142857 36 140 69 183 X57780 knownGene chrM 119 + 142531 graph_second l 3651 6052 caaacctcca 89 1.53907288794035e-22 Inf 56 0 108 0 gtgctgaata 90 1.86533067090432e-22 0 0 47 0 61 gatgtggctg 91 1.34469529678490e-21 0.147727272727273 13 88 25 115 BY657720 all_est chr6 8185411 - 110250 graph_last 0 102 ctgcctctgt 92 1.6632029162303e-21 0.0377358490566038 2 53 3 69 NM_144513 refGene chr12 105137821 + 31142 graph_last l 111 313 agcttggcct 93 4.17176441937202e-21 31.5 63 2 122 3 gtgttaacca 94 4.38663008650952e-21 0.0985915492957746 7 71 14 93 NM_007478 refGene chr15_random 24126540 + 50902 graph_last 209 358 tttaataact 95 6.51432679050124e-21 31 62 2 120 3 aaggtggaag 96 2.91264208367942e-20 0.177777777777778 16 90 30 118 NM_008630 refGene chr8 95457202 + 132465 graph_last 1282 1612 taactgacaa 97 3.21879596187799e-20 12.1666666666667 73 6 141 8 NM_021272 refGene chr10 60008899 + 12620 graph_last l 18 574 ggattttgat 98 4.97786749876698e-20 0.04 2 50 3 65 NM_008538 refGene chr10 38262710 - 11621 graph_last l 20 206 ggtgcccagt 99 8.6882382456143e-20 0.102941176470588 7 68 14 89 NM_008252 refGene chr8 57226066 + 130275 graph_last 5 83 tctgcaaagg 100 9.13385567128731e-20 0.0227272727272727 1 44 1 58 NM_009696 refGene chr7 16662924 - 119339 graph_last l 338 1356 catcgccagt 101 1.80560662103754e-19 13.2 66 5 128 6 tattggctct 102 2.06779120412274e-19 4.32142857142857 121 28 234 37 tgtgtgaggt 103 2.10674480698832e-19 0.0392156862745098 2 51 4 66 NM_174998 refGene chr4 122151861 + 96906 graph_last l 199 320 ctgcttctaa 104 2.47459001073882e-19 Inf 49 0 94 0 NM_011297 refGene chr13_random 1842983 + 38627 graph_last 0 891 gcctttatga 105 2.95707729082843e-19 0.245614035087719 28 114 54 149 gggtttttat 106 3.48131265634518e-19 0.151898734177215 12 79 23 103 taagggaaat 107 3.60944517338113e-19 6.06666666666667 91 15 176 19 NM_024212 refGene chr9 66553115 + 138568 graph_second 0 828 tggtgacaaa 108 3.60944517338113e-19 0.133333333333333 10 75 20 98 NM_016774 refGene chr10 131366044 + 16755 graph_last l 1223 2180 caggccacac 109 3.62520316948393e-19 2.6125 209 80 404 104 cctttgagat 110 3.85465657545225e-19 0.0833333333333333 5 60 10 79 tatttgcaaa 111 5.86056831961187e-19 0.0425531914893617 2 47 3 62 ctgtaggtga 112 1.24495133991910e-18 0.277777777777778 35 126 67 164 tgcccagtgc 113 1.80174152261532e-18 6.21428571428571 87 14 169 18 aagaggcaag 114 1.83668194081643e-18 0.144736842105263 11 76 22 99 NM_144513 refGene chr12 105132566 + 31142 graph_last l 163 355 agagcaaatg 115 1.89998132951069e-18 11.3333333333333 68 6 131 8 cgctggttcc 116 2.62601531888570e-18 0.21875 21 96 40 126 caccaccgtt 117 2.80120153430381e-18 0.208333333333333 20 96 39 125 gcagggtggg 118 2.80120153430381e-18 0.0740740740740741 4 54 7 70 agcagtcccc 119 3.88020808165339e-18 Inf 46 0 88 0 NM_033610 refGene chr13 54537749 - 35079 graph_last l 191 518 aataaagcca 120 4.24041750305356e-18 27.5 55 2 107 3 atcctggtaa 121 5.1304530050194e-18 9.85714285714286 69 7 133 9 ttttatgttt 122 5.20694671162086e-18 0.204301075268817 19 93 37 121 NM_007687 refGene chr19 5351164 + 67562 graph_last 686 2388 gaagcaggac 123 1.07110795722794e-17 0.453815261044177 113 249 218 325 NM_009692 refGene chr9 47988814 + 137297 graph_last 0 1015 gctttcttac 124 1.19892644449207e-17 Inf 44 0 86 0 NM_008740 refGene chr11 103486744 - 24251 graph_last l 109 193 ctaacagctg 125 1.57159470255602e-17 48 48 1 93 1 NM_009790 refGene chr12 95769007 + 30604 graph_last l 442 827 actcggagcc 126 2.05730653117214e-17 3.43589743589744 134 39 259 51 NM_181548 refGene chrX 6480532 + 147056 graph_last l 175 1200 gcggggtcgc 127 2.13257220139716e-17 8.875 71 8 138 11 gtagtggaag 128 2.13257220139716e-17 8.875 71 8 138 11 tttttaatgt 129 2.16599585050458e-17 0.221052631578947 21 95 41 124 NM_177407 refGene chr18 61115646 + 65252 graph_last l 160 281 gcttccccac 130 4.49976457883904e-17 47 47 1 90 1 ctagtctttg 131 5.65538479872737e-17 0.39010989010989 71 182 138 238 NM_013873 refGene chr15 85743406 - 48930 graph_last l 290 518 gtaatctctg 132 7.20472923065382e-17 14.25 57 4 110 5 atagcagcac 133 7.28261186974565e-17 5.92857142857143 83 14 160 18 ggtgagcctg 134 9.35146289991068e-17 0.215909090909091 19 88 36 115 NM_145602 refGene chr8 96998185 + 132612 graph_last l 379 925 ccgccccttt 135 1.03499335336767e-16 10.5 63 6 122 8 BY610399 all_est chr7_random 25592931 + 127048 graph_last 0 558 tgggcaaagc 136 1.12097257243002e-16 0.177215189873418 14 79 28 103 accaatgaac 137 2.00243844417152e-16 Inf 41 0 80 0 NM_009870 refGene chr10 130337806 + 16653 graph_last 2 158 tggagcgttg 138 2.00243844417152e-16 0.0263157894736842 1 38 1 49 NM_023279 refGene chr8 125273631 + 134257 graph_last l 131 600 tgagtccact 139 2.09491254015235e-16 0.228260869565217 21 92 41 120 caaaaataaa 140 2.57914233663888e-16 4.25 102 24 197 31 NM_009305 refGene chrX 6213381 + 147019 graph_last l 175 478 gttgggagct 141 2.72964224304295e-16 9.14285714285714 64 7 124 9 gtaagcaaaa 142 3.00657791556268e-16 0.214285714285714 18 84 34 110 NM_008410 refGene chr14 64927769 - 42663 graph_last l 423 563 ttactaattt 143 6.83364791569227e-16 11.4 57 5 110 6 agagcgaagt 144 1.21433483369985e-15 0.255102040816327 25 98 49 128 AK122363 knownGene chr15_random 8940994 + 50612 graph_last l 135 294 tgaccttggc 145 1.34518048489677e-15 43 43 1 84 1 NM_134094 refGene chr15 38057343 + 46351 graph_last l 115 228 ccctgggagc 146 1.53399290955576e-15 23 46 2 89 2 aacaatttgg 147 1.59466044135754e-15 0.305084745762712 36 118 70 154 NM_145954 refGene chr7 38153110 + 120758 graph_last l 150 243 gtcgtcctct 148 2.17334420745923e-15 17 51 3 98 4 aaataaagat 149 2.55544708564613e-15 24 48 2 93 3 attctccagt 150 8.32876381824062e-15 0.270833333333333 26 96 50 126 cccacaagct 151 8.67297258509433e-15 0 0 31 0 41 NM_016852 refGene chr11 115584466 - 25162 graph_last l 127 187 tctgtcccgc 152 8.79684283285758e-15 22 44 2 86 2 gcaataaatg 153 1.08082994869096e-14 0.220779220779221 17 77 32 101 tcccccacac 154 1.40425902862913e-14 21.5 43 2 84 2 cctgatcttt 155 2.60596520792207e-14 0.244186046511628 21 86 41 112 NM_009559 refGene chr17 36762321 + 59102 graph_last l 4 106 cacgacaccc 156 2.86864685256130e-14 0.0526315789473684 2 38 3 49 gcttttgtta 157 3.92751563905399e-14 22.5 45 2 87 3 atccgaaaga 158 5.03968537471709e-14 0.261363636363636 23 88 44 115 aagatcaaga 159 6.16467146391007e-14 0.431818181818182 76 176 146 230 NM_053078 refGene chr18 33627007 - 63718 graph_last l 29 235 cactgtccct 160 6.67332035539552e-14 0.117647058823529 6 51 12 67 NM_008874 refGene chr19 6969392 + 67713 graph_last 25 267 agcagggatc 161 7.18220132511933e-14 0.090909090909091 4 44 7 57 NM_009306 refGene chr10 111014393 - 15693 graph_last l 312 716 gacactcaat 162 7.18220132511933e-14 8.28571428571429 58 7 112 9 gatgacacca 163 7.83444868632393e-14 0.28125 27 96 52 125 taatatttaa 164 1.01707551218616e-13 Inf 35 0 68 0 NM_178405 refGene chr1 176132176 - 8552 graph_last l 125 323 aggaaagcct 165 1.22107910906120e-13 20.5 41 2 80 2 gcacaacttg 166 1.66515164971691e-13 0.4 60 150 116 196 ttcattataa 167 3.32606405889268e-13 0.333333333333333 37 111 71 145 NM_011393 refGene chr2 103005755 - 77399 graph_last l 74 114 acaccagacc 168 5.95845720587051e-13 Inf 33 0 64 0 tgtgccaagt 169 7.5045377513645e-13 0.243243243243243 18 74 34 97 NM_008687 refGene chr4 80898000 - 94453 graph_last l 3 81 gactgataaa 170 7.82934782986824e-13 0.0588235294117647 2 34 3 45 ttcagctcga 171 8.26691143207725e-13 0.183333333333333 11 60 21 78 NM_008985 refGene chr1 76797240 - 3697 graph_last l 126 226 ggaagcagac 172 9.70464952931229e-13 36 36 1 70 1 Z36397 all_est chr15_random 6842828 + 50572 graph_last l 293 1449 tccgtggttg 173 1.54903189368799e-12 0.497695852534562 108 217 209 284 NM_009234 refGene chr12 21783731 + 26716 graph_last 1 54 ctcttagcag 174 1.75403321985823e-12 0 0 27 0 35 attgtttatg 175 1.86572521418230e-12 0.153846153846154 8 52 15 68 gaaaatgaga 176 2.13198666019189e-12 0.127659574468085 6 47 12 62 NM_008538 refGene chr10 38259830 - 11621 graph_last l 8 146 aagtttgcaa 177 2.46003900193042e-12 0.032258064516129 1 31 2 41 ctgctatccg 178 2.87346178349491e-12 0.228571428571429 16 70 31 91 NM_026543 refGene chr11 49825357 - 19656 graph_last l 452 795 tagcttcctc 179 3.26909488480427e-12 3.86363636363636 85 22 164 29 caaatccaaa 180 4.206375168356e-12 0 0 26 0 34 ctattaaaag 181 5.37691303727166e-12 Inf 31 0 60 0 taaaaagaaa 182 5.49922530194198e-12 18.5 37 2 72 2 cctcctccag 183 6.70341770907886e-12 5.9 59 10 115 13 ggaaaggcaa 184 7.95314511015949e-12 19.5 39 2 76 3 NM_172882 refGene chr5 101135739 - 105200 graph_last 0 4542 atgactgata 185 9.58937552544816e-12 Inf 31 0 59 0 gcagttgtcc 186 1.00275275422107e-11 8.33333333333333 50 6 96 8 cagaacccac 187 1.16178299724735e-11 0.21875 14 64 28 84 gtgaccgaag 188 1.46961857977477e-11 0.192982456140351 11 57 21 74 NM_011844 refGene chr6 90278809 + 114831 graph_last l 108 220 gtctgggggg 189 1.67454183056898e-11 13.6666666666667 41 3 79 4 NM_177639 refGene chr17 71233584 + 60910 graph_last l 51 90 cattactgca 190 1.71956800043169e-11 Inf 30 0 58 0 NM_008855 refGene chr7 114713807 + 124872 graph_last l 88 121 gtcactctag 191 1.71956800043169e-11 Inf 30 0 58 0 tcctgaaata 192 2.00790011077586e-11 6.5 52 8 101 10 NM_024477 refGene chr5 110283855 + 105898 graph_last 0 111 agcctgtcag 193 2.38974709472827e-11 0 0 24 0 32 M22432 knownGene chr9 81062019 - 139726 graph_last 4 62 caagtttgct 194 2.38974709472827e-11 0 0 24 0 32 NM_023047 refGene chr5 29136342 + 101523 graph_last l 5 137 gccctatgct 195 2.38974709472827e-11 0 0 24 0 32 NM_178049 refGene chr11 94609649 + 23240 graph_last l 18 141 tgaaggggga 196 3.41063981369764e-11 0.0370370370370370 1 27 1 35 NM_009080 refGene chr11 68474567 + 20949 graph_last 145 795 tgggcatcca 197 4.74864519908599e-11 0.301204819277108 25 83 48 108 AF053980 knownGene chr11 7075678 + 17536 graph_second l 85 127 cacaaaagaa 198 5.31264935268507e-11 Inf 28 0 55 0 NM_133886 refGene chr4 125657160 - 97254 graph_last l 381 1164 tggacactca 199 6.48358809464554e-11 6.625 53 8 102 11 cacacacaca 200 7.23111106497991e-11 4.84615384615385 63 13 121 17 gccttccaat 201 9.72131757475023e-11 0.317647058823529 27 85 52 111 NM_011740 refGene chr15 37102344 - 46293 graph_last l 111 235 taaattagtc 202 1.30199799433620e-10 6.25 50 8 97 10 NM_009238 refGene chr13 28837602 + 33570 graph_last 0 74 gagaaaccag 203 1.41253520292623e-10 0 0 23 0 30 NM_011123 refGene chrX 125411054 - 151562 graph_last l 146 254 tccttttagc 204 1.58088086875423e-10 Inf 27 0 53 0 BC046514 knownGene chr7 21191572 + 119611 graph_last l 208 366 cgtttactgg 205 1.68600434054457e-10 6.5 52 8 100 11 NM_008410 refGene chr14 64927587 - 42663 graph_last l 251 380 cagttataaa 206 2.33480681125979e-10 10 40 4 77 5 aatttcaaaa 207 2.54083850523793e-10 0.218181818181818 12 55 23 72 NM_019632 refGene chr2 149091252 - 80110 graph_last l 79 133 aacacttgta 208 2.74687284675771e-10 Inf 27 0 52 0 ggatatgtgg 209 2.74687284675771e-10 Inf 27 0 52 0 gcccgggaat 210 2.83494255172809e-10 0.533018867924528 113 212 218 277 NM_009238 refGene chr13 28840468 - 33570 graph_second 0 27 gctgactacc 211 3.37135358532131e-10 0 0 22 0 29 NM_025814 refGene chr6 67903251 + 113525 graph_last l 27 246 cttaaggatc 212 3.54486462977352e-10 0.146341463414634 6 41 11 53 tgtaaaataa 213 3.63110933689669e-10 12.3333333333333 37 3 72 4 NM_016801 refGene chr5 133879181 + 107651 graph_last l 99 156 cagcgggagc 214 4.59338754303182e-10 30 30 1 58 1 NM_009829 refGene chr6 129062135 - 117072 graph_last l 3 63 cgctactccg 215 5.11971769100066e-10 0.0714285714285714 2 28 3 37 NM_009205 refGene chr17 85827608 - 61778 graph_last l 172 246 cataaagatt 216 5.3294305908712e-10 17.5 35 2 67 3 tgctgcacgt 217 5.3294305908712e-10 6 48 8 93 10 NM_007471 refGene chr16 86207432 - 55668 graph_last l 378 1097 atagctttct 218 5.81532228843893e-10 3.52380952380952 74 21 143 27 ttccagcctt 219 5.94986764379368e-10 3.14285714285714 88 28 170 37 NM_174851 refGene chr4 134484958 + 98075 graph_last 0 118 cctggaattt 220 6.72269302372175e-10 0.0967741935483871 3 31 5 41 NM_022029 refGene chr9 38323531 - 136533 graph_last l 147 488 ttaccatact 221 7.08890896887387e-10 16 32 2 62 2 caataaactg 222 7.65186660701482e-10 3.29166666666667 79 24 153 31 acgctgaata 223 7.91412422467321e-10 0 0 21 0 28 tgtgtcaacc 224 8.1994371393589e-10 3.57142857142857 75 21 145 28 NM_176973 refGene chr6 90295828 - 114835 graph_last l 43 235 ggcagcaaac 225 8.31410112634795e-10 0.196078431372549 10 51 20 66 NM_178405 refGene chr1 176130877 - 8552 graph_last l 85 301 atagctcgca 226 8.34984443219167e-10 Inf 26 0 50 0 tctaagtacg 227 8.34984443219167e-10 Inf 26 0 50 0 NM_175459 refGene chr19 27806158 - 68958 graph_last 0 475 ctaactagtt 228 8.90768462148256e-10 17 34 2 66 3 NM_011221 refGene chr11 6368235 - 17495 graph_last l 75 170 gtttctcagg 229 8.90768462148256e-10 17 34 2 66 3 NM_011701 refGene chr2 13583593 + 72102 graph_last l 20 170 aaggaagaga 230 9.8079716408719e-10 0.0416666666666667 1 24 1 31 NM_009497 refGene chr11 68663590 + 20978 graph_last l 280 678 cccccaattc 231 1.06860247199508e-09 4.13333333333333 62 15 119 19 NM_080433 refGene chr14 7678509 - 39040 graph_last l 4 52 acagcgtggg 232 1.09051388348504e-09 0.0714285714285714 2 28 3 36 NM_172994 refGene chr5 35322766 + 102036 graph_last l 101 228 gccctagttt 233 1.14877537270373e-09 15.5 31 2 60 2 tgggactcac 234 1.21417826943649e-09 7.16666666666667 43 6 84 8 NM_010025 refGene chrX 132123339 - 151844 graph_last l 3 70 agagaccaca 235 1.29879919598152e-09 0.0689655172413793 2 29 4 38 tgggtgtccc 236 1.69565187787122e-09 11.6666666666667 35 3 68 4 NM_007906 refGene chr2 180995866 - 82448 graph_last l 124 486 tctgcacctc 237 1.74174171368934e-09 9.5 38 4 73 5 caaatatgtt 238 1.74244770370795e-09 0.04 1 25 2 33 BQ084646 all_est chr5 32486158 + 101834 graph_last l 45 248 cagcgcgccc 239 1.79305009122440e-09 0.131578947368421 5 38 10 49 NM_008546 refGene chr4 139894743 + 98526 graph_last 0 56 gaccacctct 240 1.82450288983185e-09 0 0 21 0 27 cccccagcag 241 1.87619830679751e-09 15.5 31 2 59 2 cctttatttc 242 1.87619830679751e-09 15.5 31 2 59 2 NM_025735 refGene chr2 155903051 + 80638 graph_last l 170 382 ttcgggttgc 243 1.88873388937901e-09 7.16666666666667 43 6 83 8 NM_198886 refGene chr17 34557187 + 58892 graph_last 1 33 cctcaaagag 244 2.22349962285493e-09 0.0434782608695652 1 23 1 30 NM_182650 refGene chr6 51936886 - 112726 graph_last l 134 450 gtgtaataag 245 2.37379942887311e-09 0.298507462686567 20 67 38 88 NM_013509 refGene chr6 126683937 - 116901 graph_last l 77 103 tcccacagtt 246 2.60001495416033e-09 Inf 24 0 47 0 tgtaatacaa 247 2.69431726481058e-09 Inf 25 0 48 0 NM_030082 refGene chr11 58547188 + 20275 graph_last l 16 79 ccgtgtccga 248 2.92048670293754e-09 0.1 3 30 5 39 NM_177407 refGene chr18 61115520 + 65252 graph_second l 54 149 ctccgtccaa 249 3.38709682790770e-09 27 27 1 53 1 gtaagcataa 250 3.84868201146831e-09 0.35632183908046 31 87 60 113 gccgcagtgg 251 3.8693267543633e-09 0.0416666666666667 1 24 2 32 AB071988 knownGene chr13 55851603 - 35223 graph_last l 10 91 cggtgtcccc 252 5.26974531281455e-09 0.0769230769230769 2 26 3 34 NM_008410 refGene chr14 64928263 - 42663 graph_last l 406 611 taagtagcaa 253 5.85189172524245e-09 3.76470588235294 64 17 123 22 gaaaaaaaaa 254 5.9199944713283e-09 0.230769230769231 12 52 24 68 NM_009790 refGene chr12 95767982 + 30604 graph_last l 461 1256 acaaacttag 255 5.96033329545805e-09 2.21666666666667 133 60 258 79 ttaatattta 256 6.35602206467288e-09 6.14285714285714 43 7 84 9 NM_172261 refGene chr11 94590474 + 23236 graph_last l 179 362 ccctctgtca 257 6.58268713895236e-09 4.81818181818182 53 11 103 15 tcctgggatg 258 6.58268713895236e-09 16 32 2 61 3 NM_025840 refGene chr12 30797163 - 27119 graph_last l 10 73 aaggccttcc 259 8.73235581036002e-09 0.0416666666666667 1 24 2 31 NM_007697 refGene chr6 105400770 + 115725 graph_last l 14 175 gagttcagct 260 8.73235581036002e-09 0.0416666666666667 1 24 2 31 attttcagtt 261 8.95181492497126e-09 0.190476190476190 8 42 15 55 NM_144513 refGene chr12 105130773 + 31142 graph_last l 111 152 caaagagaac 262 8.95181492497126e-09 14.5 29 2 56 2 NM_133195 refGene chr18 26103515 - 63468 graph_last l 109 272 cgcgctctct 263 9.2477773465814e-09 7.8 39 5 76 7 NM_019408 refGene chr19 46501920 - 70198 graph_last l 130 184 cccctaattt 264 1.10054452916523e-08 15.5 31 2 60 3 AK045826 knownGene chr19 6623406 + 67692 graph_last l 75 119 tacaagtacc 265 1.10054452916523e-08 15.5 31 2 60 3 tggcccaaat 266 1.21476635881582e-08 0.229166666666667 11 48 21 63 atctactgtg 267 1.27160125072534e-08 Inf 23 0 44 0 NM_011393 refGene chr2 103004726 + 77399 graph_last l 39 79 attgtttgca 268 1.27160125072534e-08 Inf 23 0 44 0 tacatacata 269 1.27160125072534e-08 Inf 23 0 44 0 cagtctctca 270 1.36854425991385e-08 0.328571428571429 23 70 44 92 caaggtgaca 271 1.43686396514174e-08 0.408163265306122 40 98 77 128 gccgttctta 272 1.52374409552894e-08 14 28 2 55 2 genomic chr7 114714135 + 0 unique_long l 63 160 atgggtgcat 273 1.78785921452839e-08 25 25 1 49 1 taatgtagac 274 1.84921299002540e-08 26 26 1 50 1 cacaaacggt 275 1.89124529591543e-08 0.448275862068966 52 116 100 151 NM_007747 refGene chr9 59643792 + 138041 graph_last l 348 754 taatagtaac 276 1.89124529591543e-08 3.8125 61 16 117 21 NM_010471 refGene chr4 128025000 - 97422 graph_last l 236 663 cagccacacg 277 1.94606593457813e-08 11 33 3 63 4 ggaagccact 278 2.32005258141573e-08 0.464 58 125 112 163 ctgccccaca 279 2.38774216654581e-08 0 0 18 0 24 NM_016765 refGene chr17 34722444 + 58919 graph_last l 4 64 gggggacctc 280 2.38774216654581e-08 0 0 18 0 24 NM_173374 refGene chr11 87611454 + 22839 graph_last l 11 86 gagcgggatc 281 2.45877327843097e-08 0.0833333333333333 2 24 3 32 NM_028044 refGene chr3 124872028 + 88810 graph_last l 44 155 caggtttggg 282 2.70643041963956e-08 0.107142857142857 3 28 5 36 gaggagggtg 283 2.70643041963956e-08 0.107142857142857 3 28 5 36 NM_008687 refGene chr4 80897419 - 94453 graph_last l 8 69 taacaagcct 284 2.70643041963956e-08 0.0769230769230769 2 26 4 34 NM_026556 refGene chr11 87540370 - 22835 graph_last l 134 341 attggggtgg 285 2.72548231657743e-08 3.86666666666667 58 15 113 20 NM_011417 refGene chr9 22310318 + 135693 graph_last l 38 179 cgcgtgccgg 286 2.73303537458798e-08 0.195121951219512 8 41 15 53 NM_012053 refGene chr15 78134217 + 48155 graph_last 84 491 aatcctgtgg 287 3.45591268812025e-08 0.25 13 52 26 68 NM_009156 refGene chr7 12912230 - 118959 graph_last l 721 1811 tttccaggtg 288 3.72415263686826e-08 1.98701298701299 153 77 295 100 NM_022417 refGene chr1 87790773 + 4273 graph_last l 184 778 gtagtggagc 289 3.80510045832274e-08 4.07692307692308 53 13 103 17 genomic chrM 16041 - 0 unique_long l 56 153 aataattagc 290 3.80744752669331e-08 Inf 22 0 42 0 NM_022029 refGene chr9 38324027 + 136533 graph_last l 92 152 ctgggcgcgt 291 3.80744752669331e-08 Inf 22 0 42 0 NM_033264 refGene chr9 114792119 - 141710 graph_last l 116 153 ttacttgatc 292 4.35500367072808e-08 13.5 27 2 52 2 tacttgtgtt 293 4.36553300808744e-08 4.7 47 10 91 13 NM_007470 refGene chr16 31003726 - 52787 graph_last l 293 627 gaaagttggc 294 4.56085687354481e-08 13.5 27 2 53 2 genomic chr7 114718440 + 0 unique_long l 65 101 gctatttgcc 295 4.87156504562588e-08 24 24 1 47 1 NM_028398 refGene chr11 51226443 - 19763 graph_last l 13 121 tgcatcttat 296 5.30457293558346e-08 0.0833333333333333 2 24 3 31 atactgaagc 297 5.43376609907173e-08 0.293103448275862 17 58 33 76 NM_019402 refGene chr14 45986663 + 41330 graph_last 48 272 gtattcccct 298 5.43376609907173e-08 0.293103448275862 17 58 33 76 NM_009234 refGene chr12 21786108 + 26716 graph_last 1 74 cagagtgtag 299 5.51058267913456e-08 0 0 18 0 23 ggcgcggacc 300 5.51058267913456e-08 0 0 18 0 23 gttgaaatta 301 5.51058267913456e-08 0 0 18 0 23 NM_177100 refGene chr13 81841929 + 36491 graph_last l 6 57 tccaggggtg 302 5.9453225821103e-08 0.05 1 20 1 26 cccacaaggt 303 6.49461943679692e-08 0.298245614035088 17 57 32 74 NM_011838 refGene chr15 76448879 - 48016 graph_last l 79 177 gacggacacg 304 6.65841192200361e-08 Inf 21 0 41 0 NM_020573 refGene chr18 13074281 - 62961 graph_last l 83 123 tattgcaagg 305 6.65841192200361e-08 Inf 21 0 41 0 tccctccctt 306 6.65841192200361e-08 Inf 21 0 41 0 NM_025594 refGene chr18 36915908 + 64022 graph_last l 166 284 taacaggata 307 6.90939568626248e-08 7 35 5 67 6 attctgaaca 308 6.97334833425572e-08 13 26 2 51 2 gcccccctct 309 7.34734959463647e-08 2.82142857142857 79 28 153 37 NM_007589 refGene chr7 13970316 - 119114 graph_last l 222 685 atccgcaccc 310 7.63686912435974e-08 3.25 65 20 126 26 NM_007791 refGene chr1 138668031 + 6543 graph_last 216 519 ggctgttgaa 311 7.79579094163022e-08 8.25 33 4 63 5 gggaaggcgg 312 7.79579094163022e-08 0.428571428571429 42 98 81 128 ggagagggta 313 7.83525006496123e-08 0.147058823529412 5 34 10 44 NM_009457 refGene chrX 19235820 + 147564 graph_last l 47 288 tagccaagcc 314 7.83525006496123e-08 0.219512195121951 9 41 17 54 agagacacca 315 1.12983453048360e-07 0.0869565217391304 2 23 3 30 attatatttt 316 1.15762598677293e-07 13 26 2 50 2 aagaaaaaaa 317 1.27794646305204e-07 0.161290322580645 5 31 9 41 BE632211 all_est chrUn_random 7803125 + 142887 graph_last 0 698 ctgcggcttc 318 1.27794646305204e-07 3.6 54 15 105 19 NM_009238 refGene chr13 28838773 - 33570 graph_second 0 23 gagaaactcc 319 1.27794646305204e-07 0 0 17 0 22 NM_145587 refGene chr7 118305075 - 125072 graph_second 0 22 gaggcttaga 320 1.27794646305204e-07 0 0 17 0 22 U70442 knownGene chr2 153137901 - 80366 graph_last 1 64 tgagtgaaga 321 1.27794646305204e-07 0 0 17 0 22 tggctcggtc 322 1.27794646305204e-07 0.577114427860697 116 201 225 262 NM_029767 refGene chr7 3771444 + 118489 graph_last l 136 512 cccgtgtgct 323 1.29502362878484e-07 0.361111111111111 26 72 50 94 NM_011655 refGene chr17 35502360 - 58992 graph_last s 3 35 aacgacctcg 324 1.32514228832788e-07 0.0526315789473684 1 19 1 25 gtgatattta 325 1.35458549827684e-07 23 23 1 45 1 NM_133195 refGene chr18 26103935 - 63468 graph_last l 96 185 aagagaacac 326 1.75381503785927e-07 6.8 34 5 65 6 NM_029186 refGene chr19 46557251 + 70202 graph_last 0 457 ggccgctgct 327 1.76548875241503e-07 0.25 11 44 21 58 NM_133977 refGene chr9 105708477 - 140965 graph_last l 233 421 ccctgagggg 328 1.91769613813435e-07 12.5 25 2 49 2 gcgaagctca 329 2.01153550249573e-07 0.384615384615385 30 78 58 102 X57780 knownGene chrM 2069 + 142531 graph_last l 436 2194 aacggctaaa 330 2.02968925169730e-07 Inf 20 0 38 0 NM_145545 refGene chr3 146522536 + 90000 graph_second 0 2495 agcaattcaa 331 2.02968925169730e-07 Inf 20 0 38 0 gctgtgggtc 332 2.02968925169730e-07 Inf 20 0 38 0 NM_145391 refGene chr6 127164840 + 116960 graph_last l 117 162 tattctcaac 333 2.16730748819377e-07 Inf 20 0 39 0 gtacatactg 334 2.47558253591645e-07 4.18181818181818 46 11 89 14 NM_023429 refGene chr5 73246806 - 103823 graph_last l 272 558 ttgagggggg 335 2.76282848754005e-07 3.53333333333333 53 15 103 19 NM_172557 refGene chr11 50011433 + 19677 graph_last l 27 143 tttgttaatt 336 2.76282848754005e-07 0.176470588235294 6 34 12 45 NM_013556 refGene chrX_random 10203554 + 153014 graph_last l 168 266 tttcagcagt 337 2.81768586543122e-07 6.6 33 5 64 6 ccctgatttt 338 2.87756250571085e-07 0.2 7 35 13 46 NM_024462 refGene chr4 118315221 + 96672 graph_last l 5 63 acggagctgg 339 2.9762366267679e-07 0 0 16 0 21 NM_008302 refGene chr17 44962223 - 59486 graph_second 3 29 gaagaggtgg 340 2.9762366267679e-07 0 0 16 0 21 NM_010784 refGene chr2 92547183 - 76924 graph_last b 6 45 ggcttccgcg 341 2.9762366267679e-07 0 0 16 0 21 tgaaaccgcg 342 2.9762366267679e-07 0 0 16 0 21 NM_009721 refGene chr1 167488231 + 7965 graph_last l 226 760 ttctagcata 343 2.9762366267679e-07 6.16666666666667 37 6 71 8 NM_173437 refGene chr1 138358972 - 6521 graph_last l 2 51 gcaaggctca 344 2.98018930192066e-07 0.0555555555555556 1 18 1 24 NM_011861 refGene chr17 27340445 + 58149 graph_last l 49 144 aactggccgc 345 3.38560260143994e-07 Inf 19 0 37 0 NM_146125 refGene chr2 120021247 + 78437 graph_last l 55 96 gtcctgcagg 346 3.38560260143994e-07 Inf 19 0 37 0 NM_008538 refGene chr10 38260031 + 11621 graph_last l 7 148 aactcctaag 347 3.65201594706335e-07 0.142857142857143 4 28 7 36 NM_009920 refGene chr19 4914237 - 67497 graph_last l 46 301 ggggcagccc 348 3.65201594706335e-07 0.219512195121951 9 41 18 53 attttgtata 349 4.05313498860764e-07 22 22 1 43 1 NM_009388 refGene chr14 25105474 + 40055 graph_last l 41 300 ggatgctggg 350 4.24216989862399e-07 0.210526315789474 8 38 16 50 NM_053076 refGene chr19 7418016 + 67781 graph_last 5 58 ggaatccttg 351 4.38556541845396e-07 0.05 1 20 2 26 gctccctctg 352 4.523774753917e-07 0.161290322580645 5 31 10 41 NM_053104 refGene chr15 78424273 - 48203 graph_last l 22 121 ttgctggctt 353 4.80926119798749e-07 0.115384615384615 3 26 6 34 tagagactgc 354 5.13168916334735e-07 0.238095238095238 10 42 20 55 NM_009227 refGene chr1 136480038 - 6340 graph_last 8 94 ctaaaaggag 355 5.2054548524656e-07 0.0869565217391304 2 23 4 30 NM_029879 refGene chr13 103551767 - 37712 graph_last l 48 91 caaatggact 356 5.75820719273412e-07 Inf 19 0 36 0 NM_019688 refGene chr2 72651197 + 75660 graph_last l 94 116 ttcataatct 357 5.75820719273412e-07 Inf 19 0 36 0 tccactgtgc 358 6.00002893626467e-07 3.46666666666667 52 15 101 19 AK010983 knownGene chr8 71207329 + 131015 graph_last 2 82 gcactgcgca 359 6.78912067478719e-07 0.0555555555555556 1 18 1 23 NM_010064 refGene chr2 71555694 + 75596 graph_last l 5 69 tcggacaaaa 360 6.78912067478719e-07 0.0555555555555556 1 18 1 23 NM_013691 refGene chr3 91452443 - 86787 graph_last 2 61 gttggagcag 361 7.01500598553089e-07 0 0 15 0 20 tttgtgtctg 362 7.05242168694799e-07 21 21 1 41 1 NM_007471 refGene chr16 86207437 + 55668 graph_last l 86 131 gcataagcaa 363 7.10030899610529e-07 22 22 1 42 1 tatagatatg 364 7.10030899610529e-07 22 22 1 42 1 aggatctcag 365 7.18980129645008e-07 6.4 32 5 61 6 tgacaatttt 366 7.41394556405618e-07 0.125 3 24 5 32 NM_177342 refGene chr19 47082444 - 70268 graph_last 322 850 taatactcaa 367 7.59854892720213e-07 2.95454545454545 65 22 125 29 ggatggggag 368 8.35854189764834e-07 0.344827586206897 20 58 38 76 AK048611 knownGene chr9 67857011 + 138704 graph_second 0 66 aggacaccgc 369 9.62775908666021e-07 0.0526315789473684 1 19 2 25 X57780 knownGene chrM 6672 - 142531 graph_second 152 213 tggtgtaagc 370 9.67742570248371e-07 9.33333333333333 28 3 54 4 NM_008740 refGene chr11 103485771 - 24251 graph_last l 67 132 aattaattta 371 9.80585949077785e-07 Inf 18 0 35 0 tgtatacaca 372 9.80585949077785e-07 Inf 18 0 35 0 NM_009790 refGene chr12 95768593 + 30604 graph_last l 111 171 cagcttgatg 373 9.92472357022893e-07 13 26 2 50 3 NM_197988 refGene chr8 122517560 + 133997 graph_last 0 1074 ctaataaaag 374 9.92472357022893e-07 2.73076923076923 71 26 137 34 tttttgatga 375 1.05683393097018e-06 0.230769230769231 9 39 18 51 NM_025893 refGene chrX 125569334 + 151577 graph_last l 196 375 catactatat 376 1.07141233196584e-06 5.83333333333333 35 6 67 8 taataaataa 377 1.07141233196584e-06 5.83333333333333 35 6 67 8 acttcagcca 378 1.07332331704689e-06 0.090909090909091 2 22 4 29 tagggcaatc 379 1.07734349073653e-06 0.35 21 60 41 79 NM_009900 refGene chr16 20326531 + 52187 graph_last l 109 178 agtggctaat 380 1.14270485775779e-06 21 21 1 40 1 NM_144513 refGene chr12 105134045 + 31142 graph_last l 76 231 atcctaggtc 381 1.39761829882162e-06 6.6 33 5 63 7 AK021267 knownGene chr11 6326115 - 17486 graph_last l 25 176 tgttgattgg 382 1.50040803987706e-06 0.166666666666667 5 30 10 39 NM_009156 refGene chr7 12912473 - 118959 graph_second l 9 95 acaggaagga 383 1.50497311979184e-06 0.0588235294117647 1 17 1 22 NM_009062 refGene chr1 173495252 - 8325 graph_last l 77 118 actttgagat 384 1.50497311979184e-06 11.5 23 2 44 2 NM_133718 refGene chr9 82374375 - 139783 graph_last l 124 176 cagaatgctg 385 1.50497311979184e-06 11.5 23 2 44 2 NM_008142 refGene chr4 153670850 + 99772 graph_last 2 87 gcgactggaa 386 1.50497311979184e-06 0.0588235294117647 1 17 1 22 NM_010497 refGene chr1 66764274 - 3174 graph_last l 7 120 ggcaataatg 387 1.50497311979184e-06 0.0588235294117647 1 17 1 22 NM_144859 refGene chr17 64373399 - 60598 graph_last l 135 233 tggatttctt 388 1.52632578261443e-06 9 27 3 52 4 NM_009548 refGene chr11 61020026 - 20524 graph_last l 112 164 ccaaagaacc 389 1.57261991259039e-06 11.5 23 2 45 2 NM_175752 refGene chr2 74006713 - 75776 graph_last 141 321 cagttattaa 390 1.58760789699998e-06 9 27 3 53 4 NM_144513 refGene chr12 105139339 + 31142 graph_last l 161 243 ctaagtaaaa 391 1.58760789699998e-06 9 27 3 53 4 genomic chr10 130504840 - 0 unique_long l 55 103 gtggcaggcg 392 1.59869393856352e-06 12.5 25 2 48 3 gcctaatgta 393 1.63188435408997e-06 0.486238532110092 53 109 103 142 caccaccaca 394 1.64171813464688e-06 0.306122448979592 15 49 29 64 ctgtaatgat 395 1.65128711512827e-06 Inf 18 0 34 0 NM_015814 refGene chr7 104213348 - 124305 graph_last l 70 135 ggagcgctat 396 1.65128711512827e-06 Inf 18 0 34 0 AK018192 all_mrna chr4 85708753 - 94738 graph_last l 107 165 ttccactgtc 397 1.65128711512827e-06 Inf 18 0 34 0 NM_007930 refGene chr13 95527347 + 37152 graph_last l 190 375 tctgtatgtt 398 1.85537603198900e-06 3.5 49 14 94 18 NM_013681 refGene chr6 116901195 + 116249 graph_last l 100 219 ctggagatgt 399 1.86171023377703e-06 20 20 1 39 1 tctcccccac 400 1.86171023377703e-06 20 20 1 39 1 ataatggata 401 1.94214473899247e-06 0.236842105263158 9 38 17 49 gggcagaggt 402 2.03426652472343e-06 0.0555555555555556 1 18 2 24 NM_007694 refGene chr2 132937348 + 79364 graph_last l 158 330 tgactagcgt 403 2.07608249226006e-06 7 28 4 55 5 tcaaacttgg 404 2.08376027612768e-06 0.375 24 64 46 83 NM_022656 refGene chr14 25710087 - 40123 graph_last l 90 323 ggtccaagag 405 2.11164675071418e-06 0.222222222222222 8 36 16 47 NM_023122 refGene chrX 154411688 + 152747 graph_last l 236 368 acagaattat 406 2.14360463450216e-06 4.625 37 8 71 10 AA139939 all_est chr3 90376205 + 86642 graph_last l 8 116 gagagaaaac 407 2.18023818289785e-06 0.0952380952380952 2 21 4 28 NM_015816 refGene chr8 70946927 + 130970 graph_last l 20 174 gcggctcacc 408 2.19335232712235e-06 0.153846153846154 4 26 7 34 gctttgactg 409 2.22369510681156e-06 0.1 2 20 3 26 NM_008687 refGene chr4 80902645 - 94453 graph_last 3 55 tgcttgaaca 410 2.22369510681156e-06 0.1 2 20 3 26 NM_009142 refGene chr8 96065511 + 132522 graph_last l 78 152 ctccacagaa 411 2.37636459021537e-06 11 22 2 43 2 NM_030689 refGene chr15 81110420 - 48457 graph_last l 50 132 tgcagtgcac 412 2.37636459021537e-06 11 22 2 43 2 NM_010895 refGene chr11 97910831 - 23629 graph_last b 21 98 tacgaggagc 413 2.63365633856117e-06 0.193548387096774 6 31 12 41 gaggagtggg 414 2.87852176043798e-06 Inf 17 0 33 0 ttttctatgc 415 2.87852176043798e-06 Inf 17 0 33 0 NM_028392 refGene chr18 43302393 - 64388 graph_last l 21 102 acaggctcct 416 3.56269465895502e-06 0.125 3 24 6 31 acccctgacc 417 3.56269465895502e-06 0.125 3 24 6 31 NM_019962 refGene chr1 139100464 + 6571 graph_last l 17 102 ctgtacattt 418 3.56269465895502e-06 0.125 3 24 6 31 AK010485 knownGene chr15_random 13961085 + 50719 graph_last 1 27 aattctctgt 419 3.70207829430839e-06 0 0 14 0 18 NM_021399 refGene chr12 103477310 - 31002 graph_last l 5 29 ctatggaagg 420 3.70207829430839e-06 0 0 14 0 18 gtcatagctg 421 3.70207829430839e-06 0 0 14 0 18 taaaccactg 422 3.93184018913724e-06 11 22 2 42 2 BC052699 knownGene chr6 126842831 - 116923 graph_last l 137 519 aacccctgcc 423 3.95563452517915e-06 0.467391304347826 43 92 83 120 NM_011035 refGene chr7 90025637 + 123245 graph_last l 246 410 ctcagaggtc 424 4.03225357956619e-06 3.90909090909091 43 11 84 15 tgtaagtctg 425 4.52132082457301e-06 0.153846153846154 4 26 8 34 NM_008687 refGene chr4 80903153 - 94453 graph_last l 3 39 agccagccat 426 4.53686644327275e-06 0.0952380952380952 2 21 4 27 BC003791 knownGene chr8 46058106 - 129726 graph_last l 381 943 ggtggtgctt 427 4.7035971541866e-06 2.36363636363636 78 33 151 43 AK032343 all_mrna chr7 71977154 + 122340 graph_last l 31 156 caggctgata 428 4.7514070283920e-06 0.105263157894737 2 19 3 25 gaggctcaca 429 5.01912903440703e-06 0.136363636363636 3 22 5 29 gccaaaccaa 430 5.01912903440703e-06 0.136363636363636 3 22 5 29 NM_175692 refGene chr2 159010496 + 80939 graph_last l 52 68 ctactgaact 431 5.05555076452616e-06 Inf 17 0 32 0 gaaaggagac 432 5.05555076452616e-06 Inf 17 0 32 0 genomic chr9 38323781 - 0 unique_long l 119 145 gttatctgat 433 5.05555076452616e-06 Inf 17 0 32 0 tatgtcagta 434 5.05555076452616e-06 Inf 17 0 32 0 tctctgaccc 435 5.05555076452616e-06 Inf 17 0 32 0 NM_178615 refGene chr17 15456505 - 57334 graph_last l 6 72 tgccaagttc 436 5.05555076452616e-06 Inf 17 0 32 0 NM_080459 refGene chr2 121632969 + 78599 graph_last l 76 152 tggaatgagc 437 5.05555076452616e-06 Inf 17 0 32 0 ctcgagtctc 438 5.06617696658656e-06 0.243243243243243 9 37 18 48 acccgccggg 439 5.13778327156827e-06 6.75 27 4 53 5 NM_172286 refGene chr8 121911265 - 133955 graph_last l 35 62 tcagggagcc 440 5.13778327156827e-06 19 19 1 37 1 NM_007756 refGene chr5 107494346 + 105667 graph_last l 178 537 tcagaggcct 441 5.25084304512516e-06 4.625 37 8 72 11 NM_026629 refGene chr6 55168250 + 112941 graph_last l 20 135 agagcaagga 442 6.94023396514437e-06 0.130434782608696 3 23 6 30 NM_010111 refGene chr8 8671201 - 127784 graph_last l 7 61 acagttaagc 443 7.28741031687603e-06 0.166666666666667 4 24 7 32 gatgcgcttg 444 7.36582231162393e-06 0.0666666666666667 1 15 1 20 gggggtgagg 445 7.36582231162393e-06 0.0666666666666667 1 15 1 20 NM_008683 refGene chr14 46790213 - 41409 graph_last l 42 362 tgtgcttccc 446 7.58133096621742e-06 0.225806451612903 7 31 13 41 aagaaaatag 447 8.90926095758257e-06 0.285714285714286 12 42 24 55 ctgcagcggc 448 8.90926095758257e-06 19 19 1 36 1 NM_013681 refGene chr6 116888565 + 116249 graph_last l 29 70 ccattgattg 449 9.03170930430097e-06 Inf 16 0 30 0 ctctggaaag 450 9.03170930430097e-06 Inf 16 0 30 0 genomic chr12 105130081 + 0 unique_long l 81 156 gggatggcca 451 9.03170930430097e-06 Inf 16 0 30 0 AK044090 knownGene chr9 72562933 - 139102 graph_last l 38 57 ggtctaagcg 452 9.03170930430097e-06 Inf 16 0 30 0 NM_009224 refGene chr7 38518551 + 120795 graph_last l 31 36 tccctttgag 453 9.03170930430097e-06 Inf 16 0 30 0 tcggatatta 454 9.03170930430097e-06 Inf 16 0 30 0 tgacccttgc 455 9.03170930430097e-06 Inf 16 0 30 0 NM_013873 refGene chr15 85743411 + 48930 graph_second l 58 114 tgtggttcca 456 9.03170930430097e-06 Inf 16 0 30 0 BC047418 knownGene chrX 91466080 + 150344 graph_last 0 3086 aggacaaata 457 9.03687670146945e-06 Inf 16 0 31 0 NM_008963 refGene chr2 25734542 - 72846 graph_last 54 177 gccaccctct 458 9.03687670146945e-06 Inf 16 0 31 0 NM_146073 refGene chr17 3537545 - 56573 graph_last 1 2114 tagttactta 459 9.03687670146945e-06 Inf 16 0 31 0 NM_026959 refGene chr5 36556737 - 102112 graph_last l 19 123 ggccgtgtgc 460 9.50889259433502e-06 0.142857142857143 3 21 5 28 genomic chr9 22636872 - 0 unique_long l 9 119 acagtctatg 461 9.78070841365112e-06 0.111111111111111 2 18 3 24 ccatttgagc 462 9.78070841365112e-06 0.111111111111111 2 18 3 24 NM_181750 refGene chr1 130934896 + 5979 graph_last l 77 108 tcaaaactat 463 1.05840092932555e-05 10.5 21 2 40 2 NM_007933 refGene chr11 70223267 - 21160 graph_last l 58 307 ggctgggggc 464 1.06866049694995e-05 0.292682926829268 12 41 23 53 NM_174991 refGene chr15 76291904 + 48001 graph_last l 151 249 gtcctgaccc 465 1.06866049694995e-05 5.6 28 5 54 6 tgatatgagc 466 1.09294744817860e-05 2.89473684210526 55 19 106 25 ttatcaagtg 467 1.21100985403969e-05 4.5 36 8 69 11 NM_009871 refGene chr11 80051754 + 22184 graph_last l 45 226 ctgctatgaa 468 1.29846461674386e-05 0.225806451612903 7 31 14 41 NM_026313 refGene chr11 93881411 - 23162 graph_last l 9 61 ggctatgcca 469 1.34412778731024e-05 0.136363636363636 3 22 6 29 NM_172610 refGene chr15 85525718 + 48914 graph_last l 100 457 tcagacaata 470 1.36914330550975e-05 0.403225806451613 25 62 48 81 NM_013685 refGene chr18 70042134 + 65838 graph_last l 12 177 accgttctgt 471 1.43454836075645e-05 0.214285714285714 6 28 11 37 gaaaatatcc 472 1.43454836075645e-05 0.214285714285714 6 28 11 37 NM_016860 refGene chr19 46566407 - 70209 graph_last l 38 177 gactgcagtg 473 1.47034101065251e-05 0.192307692307692 5 26 9 34 tatctgtcta 474 1.47099665839627e-05 0.264705882352941 9 34 17 45 gggtggggtg 475 1.48453989222615e-05 0.206896551724138 6 29 12 38 cccattggag 476 1.48865103727952e-05 Inf 15 0 29 0 NM_011170 refGene chr2 132079926 + 79291 graph_last l 42 75 taacttagca 477 1.48865103727952e-05 Inf 15 0 29 0 NM_144892 refGene chr2 165613083 + 81339 graph_last l 78 141 tccatccagg 478 1.48865103727952e-05 Inf 15 0 29 0 ttggctgccc 479 1.48865103727952e-05 0.470588235294118 40 85 78 111 NM_021324 refGene chr7 4002060 + 118502 graph_last l 77 162 gcaaagaaaa 480 1.48904910997846e-05 18 18 1 35 1 BC023180 knownGene chr8 111357119 + 133337 graph_last l 5 105 aagctgtgag 481 1.60918731566873e-05 0.0666666666666667 1 15 1 19 aatgtttctg 482 1.60918731566873e-05 0.0666666666666667 1 15 1 19 NM_013514 refGene chr14 62156344 - 42537 graph_last l 146 324 ctgggagggg 483 1.62589137180996e-05 5.4 27 5 53 6 gggtaggggt 484 1.62589137180996e-05 5.4 27 5 53 6 NM_025994 refGene chr4 140737608 - 98638 graph_last 75 162 tgcttgctca 485 1.62589137180996e-05 5.4 27 5 53 6 genomic chr8 96314097 - 0 unique_long l 11 173 gcaaagcagc 486 1.62623889161206e-05 0.1 2 20 4 26 BB672243 all_est chr5 111254180 - 105942 graph_last l 50 254 cttgtagctg 487 1.62654951110768e-05 0.346938775510204 17 49 33 64 BC029810 knownGene chr7 93843129 + 123590 graph_last l 120 182 agaataaatc 488 1.74796077350129e-05 10 20 2 39 2 NM_016783 refGene chrX 27932232 - 147872 graph_last l 3 92 tagtgttttc 489 1.74796077350129e-05 10 20 2 39 2 gtgaaattat 490 1.81549507797193e-05 4.11111111111111 37 9 71 12 NM_021551 refGene chr14 45995580 - 41332 graph_last l 184 393 ccaaccgtct 491 1.86125562520085e-05 3.8 38 10 74 13 NM_008707 refGene chr11 102658151 - 24151 graph_last 1 40 ctccctgccc 492 1.93385138275404e-05 0 0 12 0 16 NM_013834 refGene chr8 22347179 + 128587 graph_last 2 40 ctttccctgc 493 1.93385138275404e-05 0 0 12 0 16 gaggcttata 494 1.93385138275404e-05 0 0 12 0 16 NM_177876 refGene chr5 122967405 - 106929 graph_last l 8 69 ggagctccgg 495 1.93385138275404e-05 0 0 12 0 16 ggtaaacaat 496 1.93385138275404e-05 0 0 12 0 16 cgtctgtgga 497 1.99394232802993e-05 2.27272727272727 75 33 145 43 AK039193 knownGene chr7 36156355 - 120580 graph_last l 13 102 gggagtgttg 498 2.00772205446337e-05 0.111111111111111 2 18 3 23 gccaagggtc 499 2.0230982661277e-05 0.455696202531646 36 79 70 103 aaggaaatgg 500 2.10054541080911e-05 0.385964912280702 22 57 42 74 NM_026892 refGene chr9 122879003 + 142179 graph_last l 94 428 tatgttgcgg 501 2.16143023392088e-05 0.388888888888889 21 54 40 71 NM_145587 refGene chr7 118304649 - 125072 graph_last l 18 112 tgtttgtaaa 502 2.38623225523235e-05 0.173913043478261 4 23 7 30 ttgactttat 503 2.43490766921228e-05 2.22857142857143 78 35 151 46 NM_011246 refGene chr2 117550768 - 78248 graph_last l 87 114 aggttttgtt 504 2.45659689844069e-05 Inf 14 0 28 0 cttgcaatct 505 2.45659689844069e-05 Inf 14 0 28 0 NM_009303 refGene chr15 81497528 + 48510 graph_last l 53 134 taagcaagag 506 2.45659689844069e-05 Inf 14 0 28 0 NM_020573 refGene chr18 13081721 - 62961 graph_last l 34 51 tggtcttttt 507 2.45659689844069e-05 Inf 14 0 28 0 NM_172579 refGene chr12 78419716 + 29546 graph_last l 52 103 agctagggcc 508 2.47691131432538e-05 5.4 27 5 52 6 NM_020591 refGene chr11 68913687 + 21005 graph_last l 52 114 catctgtggg 509 2.52458118160121e-05 18 18 1 34 1 NM_008451 refGene chr19 4929106 - 67502 graph_last l 68 118 gcctgacccc 510 2.52458118160121e-05 18 18 1 34 1 NM_133745 refGene chr10 35377401 + 11550 graph_last l 161 241 tatagctgta 511 2.52458118160121e-05 8 24 3 46 4 NM_029530 refGene chr2 136212325 + 79508 graph_last l 58 171 tgagttcgct 512 2.52458118160121e-05 18 18 1 34 1 NM_178795 refGene chr2 121579213 + 78592 graph_last l 63 153 tgtgactccc 513 2.52458118160121e-05 18 18 1 34 1 ggcttcggtc 514 2.57846649516683e-05 0.662280701754386 151 228 292 298 gctaaccacc 515 2.88258514597193e-05 5.6 28 5 55 7 NM_025790 refGene chr13 24706246 - 33412 graph_last l 84 134 tcacctgcta 516 2.91249072268384e-05 10 20 2 38 2 NM_008131 refGene chr1 157363262 + 7351 graph_last l 47 91 tccggtaggc 517 2.91249072268384e-05 10 20 2 38 2 NM_008634 refGene chr13 97868504 - 37324 graph_last 77 416 cgcccgcccg 518 2.94017912898282e-05 0.403508771929825 23 57 44 75 NM_198419 refGene chr13 43186420 + 34339 graph_last l 75 185 taaatccgaa 519 3.28870095157969e-05 5 30 6 58 8 NM_024218 refGene chr16 56401884 + 54408 graph_last 37 280 aaggtcgagc 520 3.38586280399705e-05 0.264705882352941 9 34 18 45 NM_013895 refGene chr10 83267018 - 14144 graph_last l 43 228 gagggcttgg 521 3.45089406915036e-05 0.225806451612903 7 31 14 40 NM_133699 refGene chr12 17676661 + 26516 graph_last l 29 105 cggccactgg 522 3.49441857093132e-05 0.0714285714285714 1 14 1 18 ggggtacctg 523 3.49441857093132e-05 0.0714285714285714 1 14 1 18 NM_009457 refGene chrX 19235646 + 147564 graph_second 6 26 tgcgggcact 524 3.49441857093132e-05 0.0714285714285714 1 14 1 18 aagaaaccag 525 3.66343777269406e-05 0.241379310344828 7 29 13 38 NM_012032 refGene chr2 164238690 - 81211 graph_last l 212 335 tcagtttatt 526 3.89623459602348e-05 4.25 34 8 66 11 NM_019498 refGene chr2 28483315 + 73055 graph_second l 49 149 aatagtttga 527 3.92004459507569e-05 7.66666666666667 23 3 44 4 tcttctcaca 528 4.06181929667861e-05 0.307692307692308 12 39 23 51 genomic chr11 101636695 + 0 unique_long l 25 51 aaccagttct 529 4.11642183439008e-05 Inf 14 0 27 0 NM_011129 refGene chr11 87150159 + 22798 graph_last l 63 154 acccggctag 530 4.11642183439008e-05 Inf 14 0 27 0 BY592621 all_est chr15 74472481 - 47856 graph_last l 47 89 cattgtaggc 531 4.11642183439008e-05 17 17 1 32 1 NM_172266 refGene chr1 195572097 + 9722 graph_last l 75 143 ctgatgtcat 532 4.11642183439008e-05 17 17 1 32 1 NM_010762 refGene chr2 127885143 - 78964 graph_last 81 163 ctgggtaagc 533 4.11642183439008e-05 Inf 14 0 27 0 NM_175752 refGene chr2 74005159 - 75776 graph_last l 74 98 gcttaatgta 534 4.11642183439008e-05 17 17 1 32 1 NM_175934 refGene chr17 35599198 - 59004 graph_last l 5 60 cccagggtgt 535 4.11651651640629e-05 0.117647058823529 2 17 3 22 cctttaatcc 536 4.13504502369456e-05 1.51724137931034 220 145 425 189 cttacatttc 537 4.14142682682704e-05 0.0666666666666667 1 15 2 20 atgtagtagt 538 4.18016147747189e-05 0.222222222222222 6 27 11 35 gtgggcgtgt 539 4.20769090544694e-05 0.563025210084034 67 119 129 156 gagtctccct 540 4.29870745437832e-05 0.181818181818182 4 22 7 29 agcacacaat 541 4.34228032196599e-05 0 0 11 0 15 NM_198640 refGene chr12 108931591 - 31569 graph_last 0 21 agccacgggg 542 4.34228032196599e-05 0 0 11 0 15 NM_018741 refGene chr4 45100797 - 92863 graph_last 0 36 cagctttttt 543 4.34228032196599e-05 0 0 11 0 15 gacccccccc 544 4.34228032196599e-05 0 0 11 0 15 gctgcctaga 545 4.34228032196599e-05 0 0 11 0 15 tacacggagc 546 4.34228032196599e-05 0 0 11 0 15 tacagtctac 547 4.34228032196599e-05 17 17 1 33 1 NM_178405 refGene chr1 176130347 - 8552 graph_last l 75 235 tgtacttgaa 548 4.34228032196599e-05 17 17 1 33 1 cttgcaagtg 549 4.35423644224376e-05 2.83333333333333 51 18 99 24 NM_023850 refGene chr2 93230019 + 76987 graph_last l 75 134 ctggtacgtt 550 4.39537132564384e-05 10.5 21 2 40 3 gcagagtgcg 551 4.40689072639016e-05 0.388888888888889 21 54 40 70 NM_008923 refGene chr5 137286500 - 107983 graph_last l 61 220 aactattaaa 552 4.58911083021664e-05 9.5 19 2 36 2 NM_008447 refGene chr10 130505931 - 16675 graph_last l 32 56 ctgcaaaacc 553 4.58911083021664e-05 9.5 19 2 36 2 genomic chr17 26602950 + 0 unique_long l 61 112 tttaataaac 554 4.61897123914596e-05 10.5 21 2 41 3 ctgggcccag 555 4.80120094662360e-05 6 24 4 47 5 cattttacat 556 4.8075506692795e-05 9.5 19 2 37 2 NM_022029 refGene chr9 38325056 - 136533 graph_second l 45 98 gcgaggaaga 557 4.8075506692795e-05 9.5 19 2 37 2 NM_010206 refGene chr8 24418477 + 128679 graph_last l 28 117 ggggagacgc 558 5.34112730472512e-05 0.111111111111111 2 18 4 24 gtcaaaaaaa 559 5.34112730472512e-05 0.111111111111111 2 18 4 24 NM_153112 refGene chr7_random 1489652 - 126499 graph_last 117 251 tttgcacggt 560 5.69312005154143e-05 3.6 36 10 70 13 cccactgcct 561 5.98858286224539e-05 7.33333333333333 22 3 43 4 NM_007471 refGene chr16 86207600 - 55668 graph_last l 75 198 tatctttgga 562 5.98858286224539e-05 7.33333333333333 22 3 43 4 atggcttaat 563 6.56848017609117e-05 0.157894736842105 3 19 5 25 ctgcatcgtt 564 6.56848017609117e-05 0.157894736842105 3 19 5 25 NM_010838 refGene chr11 103992080 + 24313 graph_last l 123 477 gagagaagag 565 6.86515919870836e-05 0.413793103448276 24 58 47 76 NM_010324 refGene chr19 43600476 - 69950 graph_last l 51 152 acatacaaat 566 6.87600747521246e-05 Inf 13 0 26 0 NM_011309 refGene chr3 93204953 - 86984 graph_last l 63 93 cccattcggg 567 6.87600747521246e-05 Inf 13 0 26 0 BC049766 knownGene chr4 4060896 - 90978 graph_last l 100 249 ctgctttgtg 568 6.87600747521246e-05 Inf 13 0 26 0 NM_010358 refGene chr3 111151515 - 88259 graph_last l 45 136 gccccttctt 569 6.87600747521246e-05 Inf 13 0 26 0 gccgaccccg 570 6.87600747521246e-05 Inf 13 0 26 0 BB627528 all_est chr5 149262208 + 108843 graph_last 0 51 gtctttccta 571 6.87600747521246e-05 Inf 13 0 26 0 NM_021549 refGene chr7 37781909 - 120715 graph_last 6 67 cgtcactgcc 572 7.53766460549691e-05 0.0769230769230769 1 13 1 17 aaaagaggaa 573 7.65566829310799e-05 0.142857142857143 3 21 6 27 gcccaggctc 574 7.65566829310799e-05 0.142857142857143 3 21 6 27 gggtcaaagg 575 7.80932349402535e-05 0.2 5 25 10 33 NM_008258 refGene chr11 115003715 - 25097 graph_last l 15 97 cttgggaact 576 7.82189195830289e-05 0.190476190476190 4 21 7 28 ctaataaagc 577 7.83544090301845e-05 0.505747126436782 44 87 86 114 NM_008211 refGene chr11 115528094 - 25152 graph_last l 34 207 ggagtaagaa 578 7.86375448365191e-05 0.208333333333333 5 24 9 31 NM_026421 refGene chr5 99138773 - 105093 graph_last 33 162 ttaaacctca 579 7.86375448365191e-05 0.208333333333333 5 24 9 31 NM_009946 refGene chr13 54167181 + 35031 graph_last l 243 540 atgacaaaga 580 7.88489400908217e-05 2.9375 47 16 90 21 cagactgctc 581 8.30881150053941e-05 0.125 2 16 3 21 agaagtgttt 582 8.63029890064881e-05 0.0666666666666667 1 15 2 19 NM_008874 refGene chr19 6969259 + 67713 graph_second 0 21 cagaagctga 583 8.63029890064881e-05 0.0666666666666667 1 15 2 19 NM_007792 refGene chr10 113495663 + 15785 graph_last 0 38 ctcagtaatg 584 0.000100218732602732 0 0 11 0 14 NM_010376 refGene chr2 153447870 + 80390 graph_last l 18 113 gccgctaggc 585 0.000100218732602732 0.111111111111111 2 18 4 23 gcctcccctt 586 0.000100218732602732 0 0 11 0 14 NM_133971 refGene chr8 12323570 - 127998 graph_last l 3 32 gcgtggcagg 587 0.000100218732602732 0 0 11 0 14 NM_177188 refGene chr15_random 18412680 + 50810 graph_last 6 30 gcttgctgcc 588 0.000100218732602732 0 0 11 0 14 NM_013458 refGene chr6 87544364 + 114549 graph_last 0 42 gcttggaagt 589 0.000100218732602732 0 0 11 0 14 NM_009722 refGene chr5 121477699 - 106753 graph_last l 81 231 atttcaggta 590 0.000109430299426174 16 16 1 30 1 NM_026131 refGene chr13 55284194 - 35158 graph_last l 60 150 gaaataaaca 591 0.000111569403391948 10 20 2 38 3 NM_145544 refGene chr3 142849874 - 89852 graph_last l 101 164 taagtgaaaa 592 0.000111569403391948 10 20 2 38 3 NM_015744 refGene chr15 56417904 + 47061 graph_last l 29 65 aagatgcaca 593 0.000119026435081703 Inf 13 0 25 0 NM_021548 refGene chr9 77597717 + 139504 graph_last l 35 63 actttcagtg 594 0.000119026435081703 Inf 13 0 25 0 genomic chrM 4414 + 0 unique_long l 914 2465 aggaggactt 595 0.000119026435081703 Inf 13 0 25 0 NM_010585 refGene chr6 110248654 + 115887 graph_last l 39 60 atttcttttc 596 0.000119026435081703 Inf 13 0 25 0 NM_183187 refGene chr14 3580574 - 38877 graph_last l 92 123 ttttacctaa 597 0.000119026435081703 Inf 13 0 25 0 aaataaaaca 598 0.000119102333487236 9 18 2 34 2 aagatgatat 599 0.000119102333487236 9 18 2 34 2 NM_025879 refGene chr13 102633148 + 37637 graph_last l 94 162 gcaataaata 600 0.000119102333487236 9 18 2 34 2 NM_027350 refGene chr18 64667346 + 65455 graph_last l 173 288 ccgtgtgttc 601 0.000122640026517967 3.875 31 8 60 10 cctccctttt 602 0.000125433061291242 0.166666666666667 3 18 5 24 aaggggggca 603 0.000135908853022293 0.15 3 20 6 26 NM_178769 refGene chr7 102299364 - 124191 graph_last b 11 78 acggcaccgc 604 0.000135908853022293 0.15 3 20 6 26 genomic chr7 14003225 + 0 unique_long l 92 241 tcactttgcc 605 0.000150620134633851 7 21 3 41 4 tgctgtgaaa 606 0.000157285101631331 3.25 39 12 75 16 atgtactcgg 607 0.000166488543509775 0.0833333333333333 1 12 1 16 ctgctgcttc 608 0.000166488543509775 0.0833333333333333 1 12 1 16 NM_011634 refGene chr9 110584487 + 141318 graph_last l 146 323 cctgtgggtc 609 0.000169336038579442 4.5 27 6 53 8 gtcagttaaa 610 0.0001725373426547 0.133333333333333 2 15 3 20 NM_011100 refGene chr3 150651068 - 90234 graph_last l 38 103 cctaaaattc 611 0.000180663885132640 9.5 19 2 37 3 NM_008449 refGene chr2 50033637 + 74424 graph_last l 58 143 taccgtaccg 612 0.000182570885320791 3.66666666666667 33 9 64 12 AY255605 knownGene chr4_random 6506063 + 99997 graph_second l 31 67 ttgtcactca 613 0.000183198304235927 15 15 1 29 1 gtggggagcc 614 0.000184262341496387 0.0714285714285714 1 14 2 18 NM_010014 refGene chr4 103601428 + 95607 graph_last l 4 42 gtttttggca 615 0.000184262341496387 0.0714285714285714 1 14 2 18 caaaatacat 616 0.000184884311343038 2.55 51 20 98 26 NM_080633 refGene chr15 83461809 + 48679 graph_last l 115 306 caactgtatt 617 0.000186098532726159 3.75 30 8 58 10 tgaaataaac 618 0.000188706092655609 0.303030303030303 10 33 19 43 NM_027629 refGene chr7 92441942 + 123455 graph_last l 36 59 caccgtaatg 619 0.000195817709567683 8.5 17 2 33 2 CF901669 all_est chrUn_random 3536148 + 142725 graph_last l 86 142 tccccctcaa 620 0.000195817709567683 8.5 17 2 33 2 NM_007467 refGene chr7 24336416 - 119935 graph_last l 177 495 gctatgagaa 621 0.000205787459989299 2.63157894736842 50 19 96 25 NM_023348 refGene chr16 16883044 + 51909 graph_last l 69 88 cagtagataa 622 0.000208369462957480 Inf 12 0 24 0 NM_172544 refGene chr12 85830976 + 30167 graph_last l 23 42 gtatgtttga 623 0.000208369462957480 Inf 12 0 24 0 tatcatcttt 624 0.000208369462957480 Inf 12 0 24 0 NM_010250 refGene chr11 41756133 - 19197 graph_last l 43 98 tctcactgta 625 0.000208369462957480 Inf 12 0 24 0 tttattaaat 626 0.000208369462957480 Inf 12 0 24 0 tacaacactc 627 0.000208815674187903 0.323529411764706 11 34 21 45 tctgccctct 628 0.000225660584583904 3.16666666666667 38 12 74 16 NM_178242 refGene chr5 141719479 + 108235 graph_last 1 19 agcctggcgg 629 0.000230597459905714 0 0 10 0 13 CA451281 all_est chr17 34611718 - 58900 graph_last 0 30 agtattagac 630 0.000230597459905714 0 0 10 0 13 gcacaggaga 631 0.000230597459905714 0 0 10 0 13 AA139939 all_est chr3 90376105 - 86642 graph_last 0 39 gcgggggtgc 632 0.000230597459905714 0 0 10 0 13 gtgacggctg 633 0.000230597459905714 0 0 10 0 13 gtgttttgaa 634 0.000230597459905714 0 0 10 0 13 NM_019413 refGene chr16 74181707 + 55087 graph_last 1 29 taagaaacct 635 0.000230597459905714 0 0 10 0 13 NM_010633 refGene chr1 173947326 - 8356 graph_last l 149 284 cgatgcactg 636 0.000235870280257417 5 25 5 49 7 BC049262 knownGene chr10 101636709 + 15243 graph_last l 47 130 tgatggaagg 637 0.000237404135524983 7 21 3 40 4 BF323184 all_est chr17 25418977 + 57928 graph_last l 74 194 ttctgtcagg 638 0.000237404135524983 7 21 3 40 4 NM_011785 refGene chr1 180947586 - 8786 graph_last l 18 127 ctgggtaact 639 0.000241704124733072 0.157894736842105 3 19 6 25 aagccttgct 640 0.000242463002571689 0.25 7 28 14 36 acagtgcctg 641 0.000246016776280237 0.190476190476190 4 21 8 28 NM_022423 refGene chr11 58530943 - 20273 graph_last l 162 323 gctcagctta 642 0.000246069800228364 2.61111111111111 47 18 90 23 NM_008946 refGene chr11 70098721 + 21147 graph_last b 35 205 gaacgcgacg 643 0.000248148991916342 0.227272727272727 5 22 9 29 NM_153808 refGene chr19 23452625 + 68731 graph_last 0 137 ttcaaaaaaa 644 0.000248148991916342 0.227272727272727 5 22 9 29 AF008649 knownGene chr17 36825307 + 59106 graph_last l 173 341 gacagatgga 645 0.000250398982379647 4.5 27 6 52 8 NM_007508 refGene chr16 44062797 - 53860 graph_last 67 154 tactctgttg 646 0.000259811420754976 3.4 34 10 66 13 ggcgtcatcg 647 0.000261475641356201 0.2 4 20 7 26 tttctgtatg 648 0.000261475641356201 0.2 4 20 7 26 ttccagctgc 649 0.000281022452325420 2.57894736842105 49 19 95 25 gaaatttaaa 650 0.000290641057786624 0.324324324324324 12 37 24 48 tattaaatgt 651 0.000292354508846167 5.5 22 4 42 5 gggacctagg 652 0.000299067126880355 0.456140350877193 26 57 50 75 cctacagtcc 653 0.000300551762192508 0.275862068965517 8 29 16 38 NM_007965 refGene chr12 104251134 + 31087 graph_last l 22 155 ccacagagct 654 0.00030872539146962 0.24 6 25 12 33 NM_010630 refGene chr15 78198019 + 48169 graph_last l 55 159 gtgacagagg 655 0.000317183803446939 8.5 17 2 32 2 tgcactgact 656 0.000317183803446939 8.5 17 2 32 2 NM_008143 refGene chr11 48425607 - 19538 graph_last l 36 169 gctgcagttg 657 0.000323166216492079 0.323529411764706 11 34 21 44 NM_016792 refGene chr18 63768936 - 65404 graph_last l 103 198 cagttgtaaa 658 0.000326122788553606 4.6 23 5 45 6 AK122380 knownGene chr8 84803497 + 131761 graph_last l 86 147 gcaggtcccc 659 0.000326122788553606 4.6 23 5 45 6 aatggctagc 660 0.000344637582964855 0.133333333333333 2 15 3 19 NM_009980 refGene chr7 124868336 - 125551 graph_last l 7 35 gctctaccag 661 0.000344637582964855 0.133333333333333 2 15 3 19 NM_010267 refGene chr1 17333840 + 648 graph_last l 9 82 ggaaattaaa 662 0.000344637582964855 0.133333333333333 2 15 3 19 gggtgggaag 663 0.000352359111344409 0.285714285714286 8 28 15 37 NM_007626 refGene chr15 105222880 - 50346 graph_last l 18 112 cagttgggtt 664 0.00035361489971677 0.125 2 16 4 21 NM_028166 refGene chr7_random 785131 - 126432 graph_second 0 87 gtgacaactg 665 0.00035361489971677 0.125 2 16 4 21 NM_021515 refGene chr2 32907534 - 73459 graph_second 0 44 cacacagcat 666 0.000355708070310613 0.090909090909091 1 11 1 15 NM_016744 refGene chr2 80199013 - 76137 graph_last l 25 33 atttggtcat 667 0.000362592585926020 Inf 12 0 23 0 NM_009964 refGene chr9 52793169 + 137579 graph_last l 59 106 gcttcatctc 668 0.000362592585926020 Inf 12 0 23 0 NM_033264 refGene chr9 114798597 - 141710 graph_second l 24 54 ggacggcagt 669 0.000362592585926020 Inf 12 0 23 0 NM_030725 refGene chr2 93571606 + 76996 graph_last l 56 84 tctggttaca 670 0.000362592585926020 Inf 12 0 23 0 NM_009983 refGene chr7 134433272 - 126175 graph_last l 270 537 cctcagcctg 671 0.000367799312285906 3.3 33 10 64 13 NM_009536 refGene chr11 75336854 + 21637 graph_last l 42 180 cctccatcct 672 0.000370895897728061 0.25 6 24 11 31 aggtgctgag 673 0.000375183398336896 0.0769230769230769 1 13 2 17 gagttctctg 674 0.000375183398336896 4.33333333333333 26 6 51 8 BC056177 knownGene chr2 85035565 - 76322 graph_last l 23 113 gccaaactta 675 0.000375183398336896 0.0769230769230769 1 13 2 17 NM_025282 refGene chr13 81768655 + 36483 graph_last l 45 76 taaatagaca 676 0.000375183398336896 6.66666666666667 20 3 39 4 tcctgaaccc 677 0.000375183398336896 0.0769230769230769 1 13 2 17 NM_011162 refGene chr2 92999933 - 76972 graph_last l 118 242 ccacctggaa 678 0.000384503162170121 3.875 31 8 59 11 gatgctgcca 679 0.000423836268865239 0.190476190476190 4 21 8 27 NM_009836 refGene chr3 90467959 + 86658 graph_last 20 143 cacagaacca 680 0.00042957841309602 0.166666666666667 3 18 6 24 NM_011531 refGene chr1 135391752 - 6259 graph_last l 11 55 aaaagcaggc 681 0.000438148549035175 0.238095238095238 5 21 9 28 NM_008155 refGene chr7 27846456 - 120117 graph_second l 139 422 ggggctcagc 682 0.000441680644353173 5.25 21 4 41 5 AK076321 knownGene chr9 61996920 + 138255 graph_last l 15 90 gtggagattg 683 0.000455305142047482 0.176470588235294 3 17 5 22 NM_145969 refGene chr14 21167374 + 39829 graph_last l 62 159 ttgcttttgg 684 0.000468889892515664 0.269230769230769 7 26 13 34 NM_008248 refGene chr11 54495461 + 20041 graph_last l 74 348 tccttggggg 685 0.000486880164929767 0.285714285714286 8 28 16 37 NM_172690 refGene chr4 42233911 + 92600 graph_last l 46 87 attctccctg 686 0.000509068658204704 14 14 1 27 1 NM_013681 refGene chr6 116906623 + 116249 graph_last l 64 93 ccgctataac 687 0.000509068658204704 14 14 1 27 1 tccctgtggt 688 0.000509068658204704 14 14 1 27 1 NM_021432 refGene chr6 59384065 - 113145 graph_last l 124 244 tgtatccagt 689 0.000509068658204704 14 14 1 27 1 tagttccgac 690 0.000511563433036329 0.25 6 24 12 32 NM_008302 refGene chr17 44965350 - 59486 graph_second 0 11 atcgggcagt 691 0.000521902735970154 0 0 9 0 12 caaaagaagg 692 0.000521902735970154 0 0 9 0 12 NM_011029 refGene chr9 122505330 + 142160 graph_last 3 22 caacaacaag 693 0.000521902735970154 0 0 9 0 12 cggagaccct 694 0.000521902735970154 0 0 9 0 12 gtaggatctt 695 0.000521902735970154 0 0 9 0 12 taacatcttc 696 0.000521902735970154 0 0 9 0 12 NM_011029 refGene chr9 122506722 + 142160 graph_last 0 327 tgtcatctag 697 0.000524395942025683 3.3 33 10 63 13 NM_144859 refGene chr17 64375162 - 60598 graph_last l 61 136 ctttctcact 698 0.000532826457290894 4.8 24 5 47 7 AK039267 knownGene chr11 77897854 + 21937 graph_last l 158 492 tggacctttt 699 0.000532826457290894 4.8 24 5 47 7 NM_057171 refGene chr17 34807771 + 58931 graph_last l 21 121 cctgccaaga 700 0.000551507658072217 0.285714285714286 8 28 15 36 NM_010064 refGene chr2 71604471 + 75596 graph_last l 68 260 ttgatgccat 701 0.000568363887879152 0.3 9 30 18 39 NM_009451 refGene chr17 57065346 - 60309 graph_last l 97 280 cccagatatt 702 0.000570101111112623 3.5 28 8 55 10 NM_172290 refGene chr9 29662908 - 136058 graph_last l 87 145 aagtgtgaaa 703 0.000570171485130142 4.33333333333333 26 6 50 8 NM_025567 refGene chr15 77978170 + 48141 graph_last l 205 434 gccttctcag 704 0.000578252249893783 2.92307692307692 38 13 73 17 gcctatccaa 705 0.000579721796063377 6.33333333333333 19 3 37 4 NM_145516 refGene chr1 35567557 + 1446 graph_last l 104 173 caccctctca 706 0.000603515705524337 6.66666666666667 20 3 38 4 agcatcaata 707 0.000611859625759672 Inf 11 0 21 0 caaagaaaac 708 0.000611859625759672 Inf 11 0 21 0 NM_016968 refGene chr16 92625375 + 55990 graph_last l 32 218 ccatcggtgt 709 0.000611859625759672 Inf 11 0 21 0 NM_022027 refGene chr10 4900639 - 9989 graph_last l 47 71 gaaagcttta 710 0.000611859625759672 Inf 11 0 21 0 gtgctgccag 711 0.000611859625759672 Inf 11 0 21 0 NM_175706 refGene chr2 22109787 + 72602 graph_last l 54 76 taaataacta 712 0.000611859625759672 Inf 11 0 21 0 genomic chr9 72561130 - 0 unique_long l 39 57 tgacaagaca 713 0.000611859625759672 Inf 11 0 21 0 NM_134438 refGene chr1 138079559 - 6494 graph_last l 79 158 tgttttccct 714 0.000611859625759672 Inf 11 0 21 0 NM_198412 refGene chr4 100502464 + 95436 graph_last l 62 109 aaacaaaaca 715 0.000637329409269291 Inf 11 0 22 0 NM_178920 refGene chr15 55705037 + 47025 graph_last l 47 75 ctcagtgtgg 716 0.000637329409269291 Inf 11 0 22 0 NM_009976 refGene chr2 149268091 + 80122 graph_last l 49 73 gcaggtactg 717 0.000637329409269291 Inf 11 0 22 0 ggagatgata 718 0.000637329409269291 Inf 11 0 22 0 tatgcctgtc 719 0.000637329409269291 Inf 11 0 22 0 NM_029738 refGene chr16 3374181 + 51019 graph_last l 57 80 tgattttcat 720 0.000637329409269291 Inf 11 0 22 0 NM_010496 refGene chr12 19542551 + 26650 graph_last l 4 68 gtgggaatag 721 0.000655160462392844 0.133333333333333 2 15 4 20 tgctgagatc 722 0.000663609555940502 5.25 21 4 40 5 NM_178923 refGene chr16 91567074 + 55890 graph_last l 160 354 agaaacaaga 723 0.000711779390800395 3.09090909090909 34 11 65 14 ctatttcaaa 724 0.000711779390800395 3.09090909090909 34 11 65 14 NM_011655 refGene chr17 35501335 - 58992 graph_last l 23 98 ctcctcctgc 725 0.000724139987595761 0.2 4 20 8 26 NM_007393 refGene chr5 141627702 - 108227 graph_last l 10 73 gacgcgacca 726 0.000724139987595761 0.2 4 20 8 26 NM_026448 refGene chr5 22338244 + 101092 graph_last l 13 91 ttaaactgtc 727 0.000724139987595761 0.2 4 20 8 26 NM_013928 refGene chr3 70232604 - 85733 graph_last l 56 76 tattttgact 728 0.00072415765675005 8.5 17 2 33 3 NM_008745 refGene chr13 58918489 + 35397 graph_last l 35 56 accttgctgt 729 0.000737493945386462 9 18 2 34 3 NM_177379 refGene chr9 32958080 + 136212 graph_last l 33 60 cagaatgagc 730 0.000737493945386462 9 18 2 34 3 NM_013540 refGene chr3 82541367 - 86190 graph_last l 2 21 atattgccag 731 0.000753662286087019 0.090909090909091 1 11 1 14 D21379 all_est chr7 19969295 + 119521 graph_last l 7 71 gcacctctta 732 0.000753662286087019 0.090909090909091 1 11 1 14 gcggtgaatc 733 0.000753662286087019 0.090909090909091 1 11 1 14 atactaacgt 734 0.000754075588503823 0.166666666666667 3 18 6 23 ggggtggggg 735 0.000754075588503823 0.166666666666667 3 18 6 23 ttccccaccc 736 0.000757671231030336 0.34375 11 32 21 42 NM_008687 refGene chr4 80899931 + 94453 graph_last l 2 27 agctggtggt 737 0.0007641471178721 0.0833333333333333 1 12 2 16 BC021509 knownGene chr5 129833260 - 107354 graph_last 1 33 attacagcca 738 0.0007641471178721 0.0833333333333333 1 12 2 16 caaaactgta 739 0.0007641471178721 0.0833333333333333 1 12 2 16 BY050640 all_est chr2 167679534 + 81520 graph_last l 17 124 tgcactattg 740 0.0007641471178721 0.0833333333333333 1 12 2 16 tgctcgcaaa 741 0.0007641471178721 0.0833333333333333 1 12 2 16 NM_010498 refGene chrX 59947051 - 149023 graph_last 136 330 ttatggatct 742 0.000773304170951604 3.44444444444444 31 9 59 12 NM_023670 refGene chr6 49701833 - 112602 graph_last l 72 302 tggggaagag 743 0.000810715641247046 0.361111111111111 13 36 25 47 gacattgatt 744 0.000815623166480647 3.625 29 8 57 11 NM_021514 refGene chr15 100439762 + 49830 graph_last l 79 198 cctgcaacca 745 0.000823059524324713 3.71428571428571 26 7 51 9 AF065991 knownGene chr10 18743590 - 10634 graph_last l 9 59 aaaaatgttg 746 0.0008362207176868 0.1875 3 16 5 21 agaggtgtag 747 0.0008362207176868 7.5 15 2 29 2 NM_177274 refGene chr3 161475192 + 90591 graph_last l 51 77 agtatttatg 748 0.0008362207176868 13 13 1 26 1 NM_008691 refGene chr14 59840834 + 42397 graph_last l 80 163 agtgaatgca 749 0.0008362207176868 13 13 1 26 1 catcacacaa 750 0.0008362207176868 7.5 15 2 29 2 NM_177561 refGene chr5_random 22663978 + 109446 graph_last l 43 79 ggccagagac 751 0.0008362207176868 13 13 1 26 1 NM_029530 refGene chr2 136203764 + 79508 graph_last 0 149 gggttgggga 752 0.0008362207176868 13 13 1 26 1 NM_172473 refGene chr10 47362986 + 12180 graph_last l 19 95 gtataaagtt 753 0.0008362207176868 13 13 1 26 1 NM_013872 refGene chr15 83498097 - 48726 graph_last l 82 202 ggagttgtgc 754 0.000869568029857123 6.33333333333333 19 3 36 4 genomic chrM 5841 + 0 unique_long l 160 1099 aaacccccag 755 0.000996162584905928 Inf 10 0 20 0 attgtgtaat 756 0.000996162584905928 Inf 10 0 20 0 atttttaaaa 757 0.000996162584905928 Inf 10 0 20 0 genomic chr3 130443077 + 0 unique_long l 24 48 caggtattag 758 0.000996162584905928 Inf 10 0 20 0 genomic chr5 135848574 + 0 unique_long l 34 144 cgccctggct 759 0.000996162584905928 Inf 10 0 20 0 NM_025355 refGene chrX 123699543 - 151490 graph_last l 42 98 gtacattgta 760 0.000996162584905928 Inf 10 0 20 0 NM_019867 refGene chr1 89381889 - 4414 graph_last l 45 112 gttttgagaa 761 0.000996162584905928 Inf 10 0 20 0 NM_019406 refGene chr2 31298595 - 73309 graph_last l 58 96 taattaaatg 762 0.000996162584905928 Inf 10 0 20 0 NM_011116 refGene chr7 21072633 - 119593 graph_last l 50 113 tgcgtatgtg 763 0.000996162584905928 Inf 10 0 20 0 NM_177089 refGene chr8 24012895 - 128650 graph_last l 25 46 tgctgtaact 764 0.000996162584905928 Inf 10 0 20 0 NM_026081 refGene chrX 124376325 + 151508 graph_last l 100 223 acacttgttg 765 0.000998563515475655 5 20 4 39 5 NM_019794 refGene chr8 86434162 - 131936 graph_last l 106 188 gttgtaaagt 766 0.000998563515475655 5 20 4 39 5 NM_134150 refGene chr19 7190511 - 67742 graph_last l 96 232 tggggtctca 767 0.000998563515475655 5 20 4 39 5 ggggctcaca 768 0.00103555552384262 0.238095238095238 5 21 10 28 genomic chr3 90897331 - 0 unique_long l 116 201 aaaattgtgt 769 0.00105005560309697 3.2 32 10 61 13 NM_078478 refGene chr14 31666620 - 40471 graph_last l 66 123 aacaaagcaa 770 0.00110082378311877 8.5 17 2 32 3 NM_008927 refGene chr9 66560849 - 138570 graph_last l 70 140 atagctgggc 771 0.00110082378311877 8.5 17 2 32 3 NM_008098 refGene chr6 35451578 - 111690 graph_last l 25 63 atcagtctat 772 0.00110082378311877 8.5 17 2 32 3 gaaataaatg 773 0.00110082378311877 8.5 17 2 32 3 gagtcactct 774 0.00110082378311877 8.5 17 2 32 3 NM_019673 refGene chr3 33648305 + 84083 graph_last l 87 204 gcaagagact 775 0.00110082378311877 8.5 17 2 32 3 NM_008139 refGene chr19 16285368 + 68305 graph_last l 46 89 tgttactctc 776 0.00110082378311877 8.5 17 2 32 3 NM_018804 refGene chr3 90895018 - 86721 graph_last l 44 123 tttatggaca 777 0.00110082378311877 8.5 17 2 32 3 NM_023336 refGene chr2 27714652 - 73019 graph_last l 8 50 aacctttctc 778 0.0011257518948682 0.142857142857143 2 14 3 18 NM_133733 refGene chr9 42365508 - 136826 graph_last 2 33 actggctcca 779 0.0011257518948682 0.142857142857143 2 14 3 18 NM_134012 refGene chr11 93530498 + 23125 graph_last 3 46 gatgtgaaaa 780 0.0011257518948682 0.142857142857143 2 14 3 18 NM_198640 refGene chr12 109045110 - 31569 graph_last 0 26 aggctctcca 781 0.00114355238856567 0 0 8 0 11 NM_025284 refGene chr6 73996446 + 113918 graph_last 0 37 ccacgaggtg 782 0.00114355238856567 0 0 8 0 11 NM_009846 refGene chr10 45183534 - 12083 graph_last 0 32 cgaacaaaag 783 0.00114355238856567 0 0 8 0 11 NM_011029 refGene chr9 122505801 + 142160 graph_last 2 12 cgaggtacta 784 0.00114355238856567 0 0 8 0 11 NM_176902 refGene chr11 115943906 + 25214 graph_last 2 15 gatggccaga 785 0.00114355238856567 0 0 8 0 11 NM_010110 refGene chrX 88985124 + 150221 graph_second 0 13 gggggtggag 786 0.00114355238856567 0 0 8 0 11 gtgctctctg 787 0.00114355238856567 0 0 8 0 11 NM_009846 refGene chr10 45182952 + 12083 graph_last 2 32 tgccaggcaa 788 0.00114355238856567 0 0 8 0 11 NM_008138 refGene chr9 110247498 - 141261 graph_last l 20 144 cagagatccc 789 0.00116727841252244 0.238095238095238 5 21 9 27 ccaggagagg 790 0.00116727841252244 0.238095238095238 5 21 9 27 AK075830 knownGene chr16 8108129 - 51324 graph_last l 24 106 ctcgctaatg 791 0.00116727841252244 0.238095238095238 5 21 9 27 tgtgtgagga 792 0.00116727841252244 0.238095238095238 5 21 9 27 NM_007595 refGene chr11 5867791 - 17440 graph_last l 89 194 accctctaaa 793 0.00116977170301964 4.6 23 5 44 7 ctgctggtgg 794 0.00116977170301964 3.625 29 8 56 11 tgtatgtctt 795 0.00117523692398847 3.375 27 8 53 10 NM_173396 refGene chr2 157499191 + 80813 graph_last l 110 176 gtacaataca 796 0.00117637631140091 4 24 6 47 8 gaagatgagc 797 0.00117731979350549 2.91666666666667 35 12 68 16 NM_008487 refGene chr3 90799038 + 86700 graph_last l 14 79 aatggatgca 798 0.00118723774248752 0.133333333333333 2 15 4 19 NM_178631 refGene chr3 13949517 + 83169 graph_second 0 146 acgggcaaaa 799 0.00118723774248752 0.133333333333333 2 15 4 19 NM_025998 refGene chr4_random 10334812 + 100058 graph_last l 13 170 caggttggtt 800 0.00118723774248752 0.133333333333333 2 15 4 19 NM_177301 refGene chr3 93009576 - 86949 graph_last 70 267 ggcagcacaa 801 0.00126200275990741 0.428571428571429 18 42 34 55 AK083224 knownGene chr14 86523813 - 43463 graph_last l 39 63 cgtccaggtt 802 0.00128370498447662 7 14 2 28 2 atttgatatt 803 0.00131635944433668 12 12 1 24 1 cagactttgt 804 0.00131635944433668 12 12 1 24 1 cctttcaaac 805 0.00131635944433668 12 12 1 24 1 NM_133849 refGene chr2 179910762 - 82351 graph_last l 64 92 ctctgcaatc 806 0.00131635944433668 12 12 1 24 1 NM_020252 refGene chr17 90853487 - 62103 graph_last l 40 138 ctcttgtttc 807 0.00131635944433668 12 12 1 24 1 NM_172449 refGene chr11 87346169 + 22822 graph_last l 39 56 ttttcttcgc 808 0.00131635944433668 12 12 1 24 1 atgtctcaaa 809 0.00133319368352894 0.664516129032258 103 155 199 202 gtgccatatt 810 0.00135834147393780 0.222222222222222 4 18 7 24 X57780 knownGene chrM 5236 - 142531 graph_second 45 97 tcgaattgca 811 0.00140350869712584 13 13 1 25 1 NM_011844 refGene chr6 90281126 + 114831 graph_last 41 102 tgagcatcgg 812 0.00140350869712584 13 13 1 25 1 NM_178220 refGene chr7 92038340 - 123429 graph_last l 30 70 tgtgaagggc 813 0.00140350869712584 13 13 1 25 1 AA152957 all_est chr5 110450981 + 105914 graph_last l 3 36 aaactgagtg 814 0.00153388337258257 0.090909090909091 1 11 2 15 aattcccttt 815 0.00153388337258257 0.090909090909091 1 11 2 15 NM_175251 refGene chr15 98368120 + 49697 graph_last l 4 37 atgctgagag 816 0.00153388337258257 0.090909090909091 1 11 2 15 ccagtgcaga 817 0.00153388337258257 0.090909090909091 1 11 2 15 ccagtgcctg 818 0.00153388337258257 0.090909090909091 1 11 2 15 NM_011170 refGene chr2 132080742 + 79291 graph_last l 147 432 tattttgttt 819 0.00154791725281899 3.22222222222222 29 9 57 12 genomic chr19 46300922 - 0 unique_long l 4 44 actcaaatgg 820 0.00155893459215719 0.1 1 10 1 13 NM_010894 refGene chr2 79814959 - 76114 graph_last l 7 44 cagttgcaat 821 0.00155893459215719 0.1 1 10 1 13 NM_019479 refGene chr1 93328174 - 4687 graph_last l 3 42 ccgctgcgtg 822 0.00155893459215719 0.1 1 10 1 13 NM_007971 refGene chr6 47845060 - 112413 graph_last 1 26 tgcagctttc 823 0.00155893459215719 0.1 1 10 1 13 NM_028217 refGene chr16 33892019 - 53134 graph_last l 34 78 actgagattt 824 0.00160220872790443 Inf 10 0 19 0 genomic chr3 90896443 + 0 unique_long l 22 40 atcttactac 825 0.00160220872790443 Inf 10 0 19 0 genomic chr10 6761017 - 0 unique_long l 27 32 cctcatttcc 826 0.00160220872790443 Inf 10 0 19 0 NM_019713 refGene chr9 110198160 + 141255 graph_last l 40 75 ctcccgctct 827 0.00160220872790443 Inf 10 0 19 0 BC042720 knownGene chr1 68276988 + 3240 graph_last l 38 96 gaaaatgcat 828 0.00160220872790443 Inf 10 0 19 0 BQ178924 all_est chr13 51168087 - 34869 graph_last l 37 82 gaactggcgg 829 0.00160220872790443 Inf 10 0 19 0 BY271000 all_est chr19 4902054 - 67495 graph_last l 51 113 gagcctgtcc 830 0.00160220872790443 Inf 10 0 19 0 AU067644 all_est chr2 104406186 - 77512 graph_last l 23 42 gagttgctgt 831 0.00160220872790443 Inf 10 0 19 0 gtagtttaca 832 0.00160220872790443 Inf 10 0 19 0 NM_009115 refGene chr10 78400956 + 13741 graph_last l 78 132 tctgacctgc 833 0.00160220872790443 Inf 10 0 19 0 NM_008113 refGene chr17 25793383 - 57991 graph_last l 42 84 tctgccagga 834 0.00160220872790443 Inf 10 0 19 0 AK083224 knownGene chr14 85652753 - 43463 graph_last 1 28 tgatgatgtt 835 0.00160220872790443 Inf 10 0 19 0 BF472943 all_est chr1 38108441 - 1588 graph_last l 30 61 tgtgaggctc 836 0.00160220872790443 Inf 10 0 19 0 ctgcagcacc 837 0.00164393815393955 4.2 21 5 41 6 NM_016744 refGene chr2 80196841 - 76137 graph_last l 49 73 acaacctatg 838 0.00165498892122413 8 16 2 31 3 NM_172271 refGene chr3 110606742 - 88220 graph_last l 79 150 aggcattgtc 839 0.00165498892122413 8 16 2 31 3 NM_016886 refGene chrX 32998454 + 148054 graph_last l 59 114 aggtatgtac 840 0.00165498892122413 8 16 2 31 3 NM_010864 refGene chr9 77762942 + 139524 graph_last l 39 101 agtttttcac 841 0.00165498892122413 8 16 2 31 3 AK048138 knownGene chr15 80705321 - 48408 graph_last l 59 103 cgttccacca 842 0.00165498892122413 8 16 2 31 3 NM_025285 refGene chr3 8633132 + 82940 graph_last l 50 284 gtttaaaaag 843 0.00165498892122413 0.388888888888889 14 36 27 47 genomic chr3 77282410 + 0 unique_long l 61 81 tgattatgtg 844 0.00165498892122413 8 16 2 31 3 NM_013915 refGene chr1 181387109 + 8850 graph_last 49 208 ggaaacagtg 845 0.00167022311106231 0.382352941176471 13 34 25 45 gttgtgattt 846 0.00177080264063185 0.296296296296296 8 27 16 35 gcaatctgat 847 0.00177233957961099 1.79545454545455 79 44 153 57 NM_018804 refGene chr3 90894774 - 86721 graph_last l 143 348 aactgtgtga 848 0.00187116070423901 2.64285714285714 37 14 71 18 AA145074 all_est chr8 41943301 + 129549 graph_last 22 83 ctgccaactt 849 0.00199670108238338 0.153846153846154 2 13 3 17 NM_146170 refGene chr6 87848631 + 114579 graph_last l 13 86 gagccagtat 850 0.00199670108238338 0.153846153846154 2 13 3 17 NM_009528 refGene chr15 87202791 - 49042 graph_last l 6 83 tccttgaagt 851 0.00199670108238338 0.153846153846154 2 13 3 17 cagaccctac 852 0.00199944411757626 7 14 2 27 2 NM_011543 refGene chr11 51871878 + 19827 graph_last l 95 143 taaaaattaa 853 0.00199944411757626 7 14 2 27 2 NM_007794 refGene chr8 107045121 - 132995 graph_last l 66 88 tccctcctta 854 0.00199944411757626 7 14 2 27 2 gtgtatcttt 855 0.0020529546325343 0.32 8 25 15 33 NM_011101 refGene chr11 107597322 - 24724 graph_last l 33 66 atccgctctg 856 0.00210624752531810 12 12 1 23 1 NM_177639 refGene chr17 71232366 + 60910 graph_last 44 93 gcaatggttt 857 0.00210624752531810 12 12 1 23 1 NM_009005 refGene chr6 89403247 - 114757 graph_last l 21 116 gttaccggcc 858 0.00218166100482175 0.272727272727273 6 22 12 29 CD350194 all_est chr6 32019643 - 111398 graph_last l 10 51 aatgggtgaa 859 0.00221010190346886 0.142857142857143 2 14 4 18 NM_008748 refGene chr7 134136739 - 126141 graph_last l 3 117 agacggatgt 860 0.00221010190346886 0.142857142857143 2 14 4 18 AK013082 knownGene chr11 106483984 - 24539 graph_last l 11 75 ccgaagctga 861 0.00221010190346886 0.142857142857143 2 14 4 18 NM_023336 refGene chr2 27723480 - 73019 graph_last l 9 47 gaggcgcctg 862 0.00221010190346886 0.142857142857143 2 14 4 18 NM_011273 refGene chr1 158735049 - 7403 graph_last l 10 76 tggagtttcc 863 0.00221010190346886 0.142857142857143 2 14 4 18 NM_009438 refGene chr7 38103328 - 120755 graph_last l 18 121 agctggggtt 864 0.00230441293085929 0.1875 3 16 6 21 NM_011680 refGene chr7 24878855 - 119987 graph_last l 18 116 cccgccaccc 865 0.00230441293085929 0.1875 3 16 6 21 tggaagaaac 866 0.00230441293085929 3.375 27 8 53 11 NM_134044 refGene chr12 83501553 + 30013 graph_last 0 49 ttagatattc 867 0.00230441293085929 0.1875 3 16 6 21 genomic chr10 55089196 + 0 unique_long l 21 111 gactggctgt 868 0.00238589568821808 0.285714285714286 6 21 11 28 gagcgttttg 869 0.00238589568821808 0.673333333333333 101 150 195 196 NM_146183 refGene chr7_random 1476992 - 126495 graph_last 12 78 cccggggcga 870 0.00239293691536501 0.2 3 15 5 20 NM_144530 refGene chr1 136498115 - 6343 graph_last 18 55 tctgagacag 871 0.00239293691536501 0.2 3 15 5 20 NM_011323 refGene chr15 103059910 + 50127 graph_last l 49 147 gggagactct 872 0.00245902217162373 4 20 5 39 6 NM_008053 refGene chr3 35038626 - 84156 graph_last l 4 37 aaaattgctt 873 0.00249488965607630 0 0 8 0 10 NM_022423 refGene chr11 58531070 - 20273 graph_second 0 9 aatgtgctcg 874 0.00249488965607630 0 0 8 0 10 NM_026785 refGene chr2 165384134 + 81312 graph_last 1 19 acatctggtg 875 0.00249488965607630 0 0 8 0 10 acattgaaaa 876 0.00249488965607630 0 0 8 0 10 U70442 knownGene chr2 153137906 + 80366 graph_last s 0 25 acgttttccg 877 0.00249488965607630 0 0 8 0 10 agcacgaccc 878 0.00249488965607630 0 0 8 0 10 cacaacgccg 879 0.00249488965607630 0 0 8 0 10 NM_133206 refGene chr8 113316144 + 133479 graph_last 4 51 caggataggt 880 0.00249488965607630 0 0 8 0 10 NM_008800 refGene chr15 105854386 + 50399 graph_last l 123 248 ctcttggtct 881 0.00249488965607630 3.57142857142857 25 7 48 9 NM_029077 refGene chr4 45792216 + 92915 graph_last 3 33 gaagaatccg 882 0.00249488965607630 0 0 8 0 10 gattctccaa 883 0.00249488965607630 0 0 8 0 10 ggaaagtatg 884 0.00249488965607630 0 0 8 0 10 NM_172659 refGene chr2 27289981 + 72975 graph_last l 7 38 ggcactgtcc 885 0.00249488965607630 0 0 8 0 10 NM_145587 refGene chr7 118304654 + 125072 graph_last l 2 19 gggtaggaga 886 0.00249488965607630 0 0 8 0 10 BF465688 all_est chr17 29457036 - 58386 graph_last 0 20 ggtgacacgg 887 0.00249488965607630 0 0 8 0 10 NM_175366 refGene chr7_random 13763294 + 126800 graph_last 0 26 gtcaaatact 888 0.00249488965607630 0 0 8 0 10 NM_009234 refGene chr12 21780471 + 26716 graph_second 0 17 gtcagagaga 889 0.00249488965607630 0 0 8 0 10 NM_016959 refGene chr3 88105443 + 86463 graph_last 3 19 gtgccgaccg 890 0.00249488965607630 0 0 8 0 10 NM_009234 refGene chr12 21786972 - 26716 graph_last 0 20 taaacacatc 891 0.00249488965607630 0 0 8 0 10 NM_133733 refGene chr9 42367530 - 136826 graph_last 1 31 tactgggaga 892 0.00249488965607630 0 0 8 0 10 tagcgtctca 893 0.00249488965607630 0 0 8 0 10 NM_172681 refGene chr3 85751589 - 86328 graph_last 2 23 tgagggactg 894 0.00249488965607630 0 0 8 0 10 tgctgccatt 895 0.00249488965607630 0 0 8 0 10 NM_008737 refGene chr8 130398440 + 134614 graph_last l 4 14 ttttgtaccc 896 0.00249488965607630 0 0 8 0 10 genomic chr7 114715612 + 0 unique_long l 15 27 aatcagacct 897 0.00262967371656599 Inf 9 0 18 0 NM_172563 refGene chr11 89923502 - 22996 graph_last l 17 30 accagaatat 898 0.00262967371656599 Inf 9 0 18 0 atagtgtaaa 899 0.00262967371656599 Inf 9 0 18 0 BQ175143 all_est chr4 56709743 - 93445 graph_last l 30 56 atttgaaaat 900 0.00262967371656599 Inf 9 0 18 0 NM_009049 refGene chr1 76827488 - 3699 graph_last l 49 99 caggaaggat 901 0.00262967371656599 Inf 9 0 18 0 gacacgggag 902 0.00262967371656599 Inf 9 0 18 0 NM_175427 refGene chr2 27379465 - 72982 graph_last l 61 108 ggacttgcca 903 0.00262967371656599 Inf 9 0 18 0 NM_033524 refGene chr2 117450936 + 78241 graph_last l 18 37 tacgtgtagg 904 0.00262967371656599 Inf 9 0 18 0 genomic chr3 33848407 - 0 unique_long l 19 30 tcactgtcag 905 0.00262967371656599 Inf 9 0 18 0 genomic chr13 90093357 - 0 unique_long l 19 33 ttaggtgagg 906 0.00262967371656599 Inf 9 0 18 0 tttttaagca 907 0.00262967371656599 Inf 9 0 18 0 NM_053071 refGene chr15 36415651 - 46234 graph_last l 399 1119 aatatgtgtg 908 0.00271343950691367 1.77272727272727 78 44 151 57 BC029177 knownGene chr15 43621422 - 46642 graph_last 2 21 aatatcgaaa 909 0.00302153438647292 0.090909090909091 1 11 2 14 BC052699 knownGene chr6 126842836 + 116923 graph_last l 9 54 ccgacgcccc 910 0.00302153438647292 0.090909090909091 1 11 2 14 NM_138596 refGene chr13 67123813 + 35924 graph_last l 17 106 ggtttcaact 911 0.00302153438647292 0.263157894736842 5 19 9 25 NM_011605 refGene chr10 93515849 - 14837 graph_last l 15 68 gtgatgtaat 912 0.00302153438647292 0.090909090909091 1 11 2 14 NM_010135 refGene chr1 186002791 - 9208 graph_last l 7 40 tacgctgttc 913 0.00302153438647292 0.090909090909091 1 11 2 14 tgaaataaaa 914 0.00302153438647292 0.263157894736842 5 19 9 25 ttataccagc 915 0.00305366833121776 5.66666666666667 17 3 33 4 NM_007505 refGene chr18_random 17402584 - 67097 graph_last l 317 544 gatagataat 916 0.00307054143745109 2.125 51 24 98 31 NM_026697 refGene chr2 35462884 - 73680 graph_last l 77 148 gtgtatgaca 917 0.00307665526374056 3.11111111111111 28 9 55 12 NM_011695 refGene chr14 16734347 + 39565 graph_last 47 123 acaaattatg 918 0.00309665960525132 6.5 13 2 26 2 NM_008691 refGene chr14 59839646 + 42397 graph_last l 111 177 ggaaaaatag 919 0.00309665960525132 6.5 13 2 26 2 taaaaagaag 920 0.00309665960525132 6.5 13 2 26 2 genomic chr16 44061816 - 0 unique_long l 142 249 tctacacagt 921 0.00309665960525132 6.5 13 2 26 2 aaaacagtgg 922 0.00309939369869607 0.544117647058823 37 68 72 89 atttgtatct 923 0.00319595358086669 0.111111111111111 1 9 1 12 NM_172656 refGene chr1 60524068 + 2683 graph_last l 11 72 caccctgtgg 924 0.00319595358086669 0.111111111111111 1 9 1 12 NM_172379 refGene chr14 15268275 - 39407 graph_last 12 50 cactgacgag 925 0.00319595358086669 0.111111111111111 1 9 1 12 NM_009876 refGene chr7 135531689 - 126263 graph_last 2 36 cgtggatccc 926 0.00319595358086669 0.111111111111111 1 9 1 12 NM_198108 refGene chr19 42126302 - 69866 graph_last l 7 41 ggcttctcct 927 0.00319595358086669 0.111111111111111 1 9 1 12 genomic chr6 89403818 - 0 unique_short s 3 19 gttcgaccag 928 0.00319595358086669 0.111111111111111 1 9 1 12 ccagaacaga 929 0.00329932838530700 0.68421052631579 104 152 201 199 acacctcaaa 930 0.00330118294636533 11 11 1 22 1 NM_028119 refGene chr2 91829119 + 76822 graph_last l 39 59 cacaagtgtt 931 0.00330118294636533 11 11 1 22 1 NM_022027 refGene chr10 4901435 - 9989 graph_last 23 32 catcaatggg 932 0.00330118294636533 11 11 1 22 1 ctgtgtggcc 933 0.00330118294636533 11 11 1 22 1 tagacaaagg 934 0.00330118294636533 11 11 1 22 1 AK021160 knownGene chr9 114000545 + 141657 graph_last l 47 71 ttgctgctgc 935 0.00330118294636533 11 11 1 22 1 NM_022982 refGene chr16 17757201 + 51997 graph_last l 46 68 tttacagggt 936 0.00330118294636533 11 11 1 22 1 aagacccacc 937 0.00335282416411202 3.125 25 8 49 10 X57780 knownGene chrM 15879 - 142531 graph_second l 69 246 ggctgattag 938 0.00340379456436741 4.5 18 4 35 5 ctctgttttc 939 0.00341029283406233 4.75 19 4 36 5 AK122280 knownGene chrX 84771967 - 150054 graph_last l 55 119 gccccagact 940 0.00341029283406233 4.75 19 4 36 5 ggcctgaggc 941 0.00341029283406233 0.222222222222222 4 18 8 23 NM_080555 refGene chr4 104090744 + 95672 graph_last 45 145 gtgtagatgc 942 0.00341029283406233 4.75 19 4 36 5 NM_009790 refGene chr12 95771041 + 30604 graph_last l 97 273 tccaacttgt 943 0.00351421645903077 4 20 5 38 6 genomic chr7 124857190 + 0 unique_long l 14 81 aggagatgga 944 0.00351427853479824 0.166666666666667 2 12 3 16 gcaggacatt 945 0.0035963579006746 3.42857142857143 24 7 47 9 tgtgttgaga 946 0.00364028594918448 0.235294117647059 4 17 7 22 NM_010906 refGene chr8 85585530 - 131845 graph_last l 40 167 ggcaggactc 947 0.00367891586677846 0.447368421052632 17 38 32 50 NM_009725 refGene chr3 109064595 - 88118 graph_last 238 466 tggtgaagag 948 0.00384147137327668 2.19047619047619 46 21 88 27 ccattttctg 949 0.00397568586680240 0.2 3 15 6 20 NM_007376 refGene chr6 130377420 - 117204 graph_last l 12 80 ggtacaccgc 950 0.00397568586680240 0.2 3 15 6 20 tgttaagatg 951 0.00397568586680240 0.2 3 15 6 20 agactatgca 952 0.00397629573262017 7.5 15 2 29 3 NM_023190 refGene chr14 45734984 - 41307 graph_last l 6 39 acaagggact 953 0.00399843696141318 0.153846153846154 2 13 4 17 agggaaaaaa 954 0.00399843696141318 0.2 3 15 5 19 atggcaattt 955 0.00399843696141318 0.153846153846154 2 13 4 17 ggctgtcctg 956 0.00399843696141318 0.32 8 25 16 33 NM_019431 refGene chr11 107397888 - 24662 graph_second l 9 66 tggcctttga 957 0.00399843696141318 0.2 3 15 5 19 AI840093 all_est chr7 15829747 + 119220 graph_last l 5 36 ttggtgagtg 958 0.00399843696141318 0.2 3 15 5 19 gctttgaatg 959 0.00416411210847694 0.435897435897436 17 39 33 51 NM_009295 refGene chr2 33060457 - 73476 graph_last l 126 428 tggggtttcc 960 0.00428358449590213 3 27 9 53 12 NM_010398 refGene chr17 34913504 + 58954 graph_last l 34 154 ccagaggact 961 0.00437652835902709 0.318181818181818 7 22 13 29 NM_010315 refGene chr14 14746520 - 39376 graph_last l 59 298 aacggtgtat 962 0.00439036803625977 0.366666666666667 11 30 22 39 aataaatacc 963 0.00439036803625977 Inf 9 0 17 0 actagggtaa 964 0.00439036803625977 Inf 9 0 17 0 NM_199301 refGene chr7 132043018 - 125964 graph_last l 23 264 atgaaacttt 965 0.00439036803625977 Inf 9 0 17 0 AA797988 all_est chr2 135617563 + 79471 graph_last l 34 60 atgtttcttc 966 0.00439036803625977 Inf 9 0 17 0 ri6330417G04 rikenClones chr13 90092257 - 36806 graph_last l 39 64 caaattaaac 967 0.00439036803625977 Inf 9 0 17 0 genomic chr2 158569848 + 0 unique_long l 25 75 cagtcctccc 968 0.00439036803625977 Inf 9 0 17 0 catctagagg 969 0.00439036803625977 Inf 9 0 17 0 ccattggttt 970 0.00439036803625977 Inf 9 0 17 0 NM_009723 refGene chr6 115508288 - 116175 graph_last l 16 55 ctgtttgaac 971 0.00439036803625977 Inf 9 0 17 0 J05479 knownGene chr3 140847537 + 89686 graph_last l 38 69 cttacctcag 972 0.00439036803625977 Inf 9 0 17 0 NM_008770 refGene chr3 32070362 + 84008 graph_last l 136 262 ggtgtaaaca 973 0.00439036803625977 Inf 9 0 17 0 NM_175545 refGene chr14 18087396 - 39614 graph_last l 31 69 gtttcatttt 974 0.00439036803625977 Inf 9 0 17 0 NM_033524 refGene chr2 117452706 + 78241 graph_last l 37 75 taattggacg 975 0.00439036803625977 Inf 9 0 17 0 NM_133241 refGene chr15 90621058 - 49218 graph_last l 44 102 taggagcaaa 976 0.00439036803625977 Inf 9 0 17 0 tagtgtgtgt 977 0.00439036803625977 Inf 9 0 17 0 genomic chr2 167715885 - 0 unique_long l 23 39 tctgtctttt 978 0.00439036803625977 Inf 9 0 17 0 AK122424 knownGene chr11 73955003 - 21458 graph_last l 36 56 tggtagaacc 979 0.00439036803625977 Inf 9 0 17 0 NM_172859 refGene chr2 144543036 - 79873 graph_last l 56 93 tgtgttataa 980 0.00439036803625977 Inf 9 0 17 0 ctgtcatttg 981 0.00452097421722231 0.263157894736842 5 19 10 25 tggagagaat 982 0.00452097421722231 0.263157894736842 5 19 10 25 NM_007508 refGene chr16 44062095 - 53860 graph_last l 42 142 ctcagaaagc 983 0.00465166575783997 5.66666666666667 17 3 32 4 BB611372 all_est chr13 41323731 + 34238 graph_last 0 159 ggttgtatgt 984 0.00487546883534795 6.5 13 2 25 2 cctggcactg 985 0.00503228324787993 3.28571428571429 23 7 45 9 NM_009872 refGene chr1 76438520 + 3664 graph_last l 52 134 ctgggagttg 986 0.0050354251801114 4.5 18 4 34 5 NM_183171 refGene chr9 37655139 + 136457 graph_last b 58 291 atcgggcgca 987 0.00518797362768531 0.387096774193548 12 31 23 40 NM_177887 refGene chr5_random 412529 - 108970 graph_last 70 146 cctttctgtc 988 0.00529084392814789 3.66666666666667 22 6 42 8 cggttgctgg 989 0.00529084392814789 0.357142857142857 10 28 19 36 tcctgtgtca 990 0.00529084392814789 0.357142857142857 10 28 19 36 NM_009790 refGene chr12 95767977 - 30604 graph_last b 49 69 acgtggcgca 991 0.0053642809742342 11 11 1 21 1 actggtgact 992 0.0053642809742342 11 11 1 21 1 NM_007583 refGene chr15 79340498 - 48301 graph_last l 21 39 tacaccctca 993 0.0053642809742342 11 11 1 21 1 BC049262 knownGene chr10 101671005 + 15243 graph_last l 48 109 tgctctggag 994 0.0053642809742342 11 11 1 21 1 NM_026977 refGene chr1 76698301 + 3685 graph_last l 39 78 ttctcttctc 995 0.0053642809742342 11 11 1 21 1 NM_009104 refGene chr12 19161361 + 26608 graph_last 1 20 aactgacata 996 0.00543129768239522 0 0 7 0 9 NM_013834 refGene chr8 22345312 + 128587 graph_last 0 8 attgcctata 997 0.00543129768239522 0 0 7 0 9 caaattaacc 998 0.00543129768239522 0 0 7 0 9 NM_010583 refGene chr11 45991197 + 19428 graph_second 0 9 cacgacctga 999 0.00543129768239522 0 0 7 0 9 NM_015735 refGene chr19 10550968 + 68008 graph_last l 7 18 cagaaccgac 1000 0.00543129768239522 0 0 7 0 9 NM_009238 refGene chr13 28838778 + 33570 graph_second 0 10 ccaatgctcc 1001 0.00543129768239522 0 0 7 0 9 NM_009238 refGene chr13 28837201 + 33570 graph_last 0 19 ccataggact 1002 0.00543129768239522 0 0 7 0 9 NM_016701 refGene chr3 90065439 + 86598 graph_last 0 53 cccagaggag 1003 0.00543129768239522 0 0 7 0 9 cctgcaggtc 1004 0.00543129768239522 0 0 7 0 9 NM_145585 refGene chr7 111695615 - 124695 graph_last l 7 26 cctgtcctgc 1005 0.00543129768239522 0 0 7 0 9 NM_144824 refGene chr11 69161993 + 21033 graph_last 4 30 ctacagagga 1006 0.00543129768239522 0 0 7 0 9 ctactgacat 1007 0.00543129768239522 0 0 7 0 9 NM_009503 refGene chr4 42269923 - 92606 graph_last 6 49 cttttgagtt 1008 0.00543129768239522 0 0 7 0 9 gaaagggagg 1009 0.00543129768239522 0 0 7 0 9 gagaaaggag 1010 0.00543129768239522 0 0 7 0 9 NM_021560 refGene chr3 17968391 + 83311 graph_last l 12 54 gcgatctgcc 1011 0.00543129768239522 0 0 7 0 9 NM_175201 refGene chr4 43416344 - 92730 graph_last 1 30 gcgctgtttg 1012 0.00543129768239522 0 0 7 0 9 gctgtcgtca 1013 0.00543129768239522 0 0 7 0 9 ggggagtgga 1014 0.00543129768239522 0 0 7 0 9 AK129143 knownGene chr18 78784890 - 66286 graph_last l 2 17 gtcttagatg 1015 0.00543129768239522 0 0 7 0 9 gtggggttct 1016 0.00543129768239522 0 0 7 0 9 tcagccccac 1017 0.00543129768239522 0 0 7 0 9 tggaggaatg 1018 0.00543129768239522 0 0 7 0 9 tggcgtgtgc 1019 0.00543129768239522 0 0 7 0 9 NM_011368 refGene chr3 91659069 - 86819 graph_last 1 41 ttacaagcct 1020 0.00543129768239522 0 0 7 0 9 NM_008908 refGene chr18 53697959 - 64884 graph_last 0 18 tttgtaaaaa 1021 0.00543129768239522 0 0 7 0 9 NM_183252 refGene chr1 43338581 - 1858 graph_last l 30 194 tggcatactc 1022 0.00559888025233573 0.304347826086957 7 23 14 30 NM_009829 refGene chr6 129065716 - 117072 graph_last l 2 16 accaaaacgc 1023 0.0058740204402824 0.1 1 10 2 13 NM_009338 refGene chr17 13147732 + 57147 graph_last l 4 60 gggattcggc 1024 0.0058740204402824 0.1 1 10 2 13 NM_152895 refGene chr1 137538600 + 6443 graph_last 2 24 taattcagga 1025 0.0058740204402824 0.1 1 10 2 13 NM_009829 refGene chr6 129075403 - 117072 graph_last b 4 22 tacccgccgt 1026 0.0058740204402824 0.1 1 10 2 13 NM_011976 refGene chr19 45114408 + 70066 graph_last l 14 68 tgatggaatg 1027 0.0058740204402824 0.1 1 10 2 13 NM_011218 refGene chr17 56340786 - 60237 graph_last l 44 187 gaggacctgg 1028 0.00594505958845205 0.333333333333333 8 24 16 32 cagaacaatg 1029 0.00594667441590693 0.25 4 16 7 21 NM_009536 refGene chr11 75336796 + 21637 graph_last l 188 733 gaattaacat 1030 0.00604549618416959 0.517857142857143 29 56 57 73 NM_181595 refGene chr6 4868718 + 110051 graph_last l 46 80 ggagaaacag 1031 0.00608401527258507 7 14 2 28 3 AF031816 knownGene chr9 43684219 - 136913 graph_last l 43 91 gtgatagcgt 1032 0.00608401527258507 7 14 2 28 3 NM_172430 refGene chr1 85079480 - 4058 graph_last l 92 139 tgttgtacct 1033 0.00608401527258507 7 14 2 28 3 AI787975 all_est chr4 84452734 + 94672 graph_last 0 55 aaccagcaaa 1034 0.00627840583132442 0.181818181818182 2 11 3 15 NM_007410 refGene chr3 142379543 + 89786 graph_last l 11 62 aactaggcaa 1035 0.00627840583132442 0.181818181818182 2 11 3 15 AK028183 knownGene chr2 30233775 + 73205 graph_last l 11 48 agggcctgtg 1036 0.00627840583132442 0.181818181818182 2 11 3 15 tctgttagct 1037 0.00627840583132442 0.181818181818182 2 11 3 15 NM_026757 refGene chr11 69806545 - 21121 graph_last l 16 85 tgccctcgcc 1038 0.00627840583132442 0.181818181818182 2 11 3 15 attgcttaga 1039 0.00633337278801952 0.357142857142857 10 28 20 36 NM_153782 refGene chr11 109333175 + 24799 graph_last l 138 265 ctagcttaca 1040 0.00633337278801952 3.125 25 8 49 11 NM_021519 refGene chr2 25828459 + 72856 graph_last l 161 295 gtcaaacgga 1041 0.00633337278801952 3.125 25 8 49 11 NM_010327 refGene chr16 18226867 - 52048 graph_last l 220 602 ctccgttttg 1042 0.00648394634291149 2.04166666666667 49 24 94 31 NM_023178 refGene chr4 116584958 - 96537 graph_last b 3 30 agagacggcg 1043 0.00649450593554383 0.125 1 8 1 11 NM_029432 refGene chr2 130945921 - 79188 graph_last 1 24 aggaagctga 1044 0.00649450593554383 0.125 1 8 1 11 ccacctatcc 1045 0.00649450593554383 0.125 1 8 1 11 NM_023134 refGene chr14 35775081 + 40665 graph_last 0 51 ctgtcagtgg 1046 0.00649450593554383 0.125 1 8 1 11 AK129143 knownGene chr18 78789794 - 66286 graph_last 1 14 gctcgggagg 1047 0.00649450593554383 0.125 1 8 1 11 ggctggttga 1048 0.00649450593554383 0.125 1 8 1 11 NM_008541 refGene chr13 56517408 + 35272 graph_last l 3 30 gggagcctta 1049 0.00649450593554383 0.125 1 8 1 11 NM_008737 refGene chr8 130397400 + 134614 graph_last 1 20 tgttcatact 1050 0.00649450593554383 0.125 1 8 1 11 NM_009685 refGene chr7 97689819 - 123899 graph_last 148 378 gatcccctct 1051 0.0065908533912747 2.4 36 15 70 20 BC056498 knownGene chr7 134061373 + 126130 graph_last b 31 160 cggattcgca 1052 0.00666413640654151 0.333333333333333 7 21 13 28 NM_007999 refGene chr19 10130399 + 67962 graph_last 30 134 ggctttggag 1053 0.00666413640654151 0.333333333333333 7 21 13 28 aagcagcagc 1054 0.00667997643259592 0.214285714285714 3 14 5 18 NM_016884 refGene chr14 43935722 - 41160 graph_last 11 70 attgccctgc 1055 0.00667997643259592 0.214285714285714 3 14 5 18 cccaaggaga 1056 0.00667997643259592 0.214285714285714 3 14 5 18 ctgtacgcag 1057 0.00667997643259592 0.214285714285714 3 14 5 18 tgcaagctga 1058 0.00667997643259592 0.214285714285714 3 14 5 18 NM_011889 refGene chr15 83848784 + 48775 graph_last 10 98 gtgtacatac 1059 0.0067247230626414 0.2 3 15 6 19 NM_008568 refGene chr5 136636318 - 107939 graph_last l 5 49 ctgcactttt 1060 0.00715863674289508 0.166666666666667 2 12 4 16 tctgtccagt 1061 0.00715863674289508 0.166666666666667 2 12 4 16 AK004632 knownGene chr7 114067217 - 124833 graph_last l 11 87 tggtgactaa 1062 0.00715863674289508 0.166666666666667 2 12 4 16 genomic chrM 1072 - 0 unique_long l 20 60 aaatcttctg 1063 0.00726588490382638 Inf 8 0 16 0 genomic chr11 74745310 + 0 unique_long l 21 26 agtggtgaac 1064 0.00726588490382638 Inf 8 0 16 0 cccactggat 1065 0.00726588490382638 Inf 8 0 16 0 ctgggacagc 1066 0.00726588490382638 Inf 8 0 16 0 NM_053195 refGene chr2 145714218 + 79909 graph_last l 28 81 cttgttacac 1067 0.00726588490382638 Inf 8 0 16 0 gagaaatcag 1068 0.00726588490382638 Inf 8 0 16 0 NM_008429 refGene chr1 176179918 - 8554 graph_last l 25 37 gagagactta 1069 0.00726588490382638 Inf 8 0 16 0 NM_183173 refGene chr11 53101835 - 19914 graph_last l 39 56 gagtatggct 1070 0.00726588490382638 Inf 8 0 16 0 NM_172903 refGene chr7 72777515 - 122423 graph_last 0 64 gcaagtttga 1071 0.00726588490382638 Inf 8 0 16 0 NM_139303 refGene chr2 109472312 + 77777 graph_last 0 114 gccagaaaaa 1072 0.00726588490382638 Inf 8 0 16 0 NM_026066 refGene chr14 46025635 + 41337 graph_last l 32 88 gctgcagcgt 1073 0.00726588490382638 Inf 8 0 16 0 NM_009946 refGene chr13 54162183 + 35031 graph_last l 15 34 gggaagatgc 1074 0.00726588490382638 Inf 8 0 16 0 gtgacagttt 1075 0.00726588490382638 Inf 8 0 16 0 NM_145501 refGene chr19 42171628 + 69870 graph_last l 19 39 gtggtagccc 1076 0.00726588490382638 Inf 8 0 16 0 BU522970 all_est chr11 98436544 + 23692 graph_last l 42 77 tatgttgttc 1077 0.00726588490382638 Inf 8 0 16 0 NM_008792 refGene chr2 143886399 + 79800 graph_last l 24 41 tccaagaagc 1078 0.00726588490382638 Inf 8 0 16 0 NM_172723 refGene chr5 137216718 - 107979 graph_last l 48 58 tcccctggaa 1079 0.00726588490382638 Inf 8 0 16 0 NM_175752 refGene chr2 74005861 - 75776 graph_last l 17 24 tctaactcca 1080 0.00726588490382638 Inf 8 0 16 0 NM_172498 refGene chr14 57879884 - 42254 graph_last l 57 118 tctgtggaga 1081 0.00726588490382638 Inf 8 0 16 0 BB648977 all_est chr1 15883659 + 550 graph_last 1 51 tgctgcccca 1082 0.00726588490382638 Inf 8 0 16 0 tgctttgatt 1083 0.00726588490382638 Inf 8 0 16 0 gtggcacaca 1084 0.00743587904239513 0.370370370370370 10 27 19 35 aattaattaa 1085 0.00744013374893106 6 12 2 24 2 NM_133350 refGene chr5 29202901 + 101526 graph_last l 62 125 acctccaggc 1086 0.00744013374893106 4 20 5 39 7 BC049168 knownGene chr4 132377063 - 97875 graph_last l 87 163 cagaaaggca 1087 0.00744013374893106 6 12 2 24 2 NM_019990 refGene chr7 93675657 + 123581 graph_last l 53 87 gccccaataa 1088 0.00744013374893106 6 12 2 24 2 NM_018801 refGene chr19 10374071 + 67978 graph_last l 64 194 ggggaggttg 1089 0.00744013374893106 4 20 5 39 7 gtatttcata 1090 0.00744013374893106 4 20 5 39 7 NM_018873 refGene chr11 97094789 - 23526 graph_last l 52 102 taagcacaga 1091 0.00744013374893106 4 20 5 39 7 tagttttgtc 1092 0.00744013374893106 6 12 2 24 2 NM_172512 refGene chr3 97919894 - 87291 graph_last l 130 345 gaacaggcag 1093 0.00835141485006965 0.444444444444444 16 36 31 47 NM_009409 refGene chr14 11705194 + 39241 graph_last l 58 166 attgcagact 1094 0.00841951085038131 0.318181818181818 7 22 14 29 cacaatgtga 1095 0.00843560086453127 10 10 1 20 1 BE649911 all_est chr13 58923938 + 35413 graph_last l 27 89 gaatgtctct 1096 0.00843560086453127 10 10 1 20 1 X57780 knownGene chrM 11082 - 142531 graph_second l 38 75 gagtttggat 1097 0.00843560086453127 10 10 1 20 1 NM_008593 refGene chr4 113815543 - 96269 graph_last 0 51 gcttgaaaaa 1098 0.00843560086453127 10 10 1 20 1 NM_182839 refGene chr13 71586451 + 36077 graph_last l 37 107 ggtgttctga 1099 0.00843560086453127 10 10 1 20 1 NM_010638 refGene chr19 23310804 + 68718 graph_last l 26 47 gtagccctaa 1100 0.00843560086453127 10 10 1 20 1 NM_025359 refGene chr12 30708262 - 27104 graph_last l 59 93 taacaaatag 1101 0.00843560086453127 10 10 1 20 1 tccctgtgta 1102 0.00843560086453127 10 10 1 20 1 NM_027629 refGene chr7 92445335 + 123455 graph_last l 34 56 tgtgttattg 1103 0.00843560086453127 10 10 1 20 1 NM_024188 refGene chr15 4121571 + 44924 graph_last l 71 165 ccaatgcagc 1104 0.00867900688164035 3.125 25 8 48 11 NM_025983 refGene chr2 175045195 - 81991 graph_last 59 380 gttcactttc 1105 0.0091493881194625 0.36 9 25 18 33 ctctcttcta 1106 0.00915134136798918 0.315789473684211 6 19 11 25 tttttggtgt 1107 0.00915134136798918 0.315789473684211 6 19 11 25 NM_010595 refGene chr6 128564638 - 117035 graph_last l 78 117 atctgttcat 1108 0.0094292905399668 6.5 13 2 26 3 NM_013415 refGene chr11 69171437 - 21037 graph_last l 58 189 ccagcctgaa 1109 0.0094292905399668 6.5 13 2 26 3 NM_008855 refGene chr7 114719529 + 124872 graph_last l 62 148 accggtattt 1110 0.0094324180115105 7 14 2 27 3 NM_008020 refGene chr19 6971219 - 67714 graph_last 58 155 cactacacgg 1111 0.0094324180115105 7 14 2 27 3 NM_153563 refGene chr3 110751711 - 88229 graph_last l 16 90 gtggggtttt 1112 0.00978012487931343 0.266666666666667 4 15 7 20 gtggctaaca 1113 0.0103396654615445 5 15 3 29 4 AK122383 knownGene chr4 149172714 - 99491 graph_last l 79 157 caaaatgttt 1114 0.0108781754002195 4.25 17 4 32 5 gatatttttt 1115 0.0108781754002195 4.25 17 4 32 5 NM_152234 refGene chr13 57967471 - 35342 graph_last l 52 154 tgtgtgctct 1116 0.011087100880032 3.8 19 5 37 7 NM_177589 refGene chr9 123344210 + 142205 graph_last l 53 134 tttttgaaca 1117 0.0112216863288695 0.375 9 24 17 32 NM_019402 refGene chr14 45987519 - 41330 graph_last 10 109 acacattatt 1118 0.0113759770843161 0.181818181818182 2 11 3 14 AK034974 all_mrna chr2 53183992 + 74573 graph_last 0 77 atgttaaaaa 1119 0.0113759770843161 0.181818181818182 2 11 3 14 NM_008891 refGene chr12 54451134 + 28226 graph_last l 8 36 ccaatctgtg 1120 0.0113759770843161 0.181818181818182 2 11 3 14 NM_011751 refGene chr11 79967473 + 22170 graph_last l 6 44 ccacggtaga 1121 0.0113759770843161 0.181818181818182 2 11 3 14 cccttcactg 1122 0.0113759770843161 0.181818181818182 2 11 3 14 genomic chr11 114936877 + 0 unique_short s 0 123 cgctgatagg 1123 0.0113759770843161 0.181818181818182 2 11 3 14 NM_009336 refGene chr3 97823540 + 87276 graph_last l 7 48 ctgggaccgg 1124 0.0113759770843161 0.181818181818182 2 11 3 14 NM_020588 refGene chr1 137257395 - 6407 graph_last l 27 82 gagcagggga 1125 0.0113759770843161 0.181818181818182 2 11 3 14 gcgacgcggg 1126 0.0113759770843161 0.181818181818182 2 11 3 14 NM_013785 refGene chr9 110683038 + 141326 graph_last l 7 73 ggttgggagc 1127 0.0113759770843161 0.181818181818182 2 11 3 14 NM_009238 refGene chr13 28839679 - 33570 graph_last l 6 39 tccctgggca 1128 0.0113759770843161 0.181818181818182 2 11 3 14 NM_178718 refGene chr15 68198891 + 47652 graph_last l 9 43 ttaaaactga 1129 0.0113759770843161 0.181818181818182 2 11 3 14 NM_016686 refGene chr11 87641994 + 22842 graph_last l 5 24 acctcacctt 1130 0.0114700995725885 0.111111111111111 1 9 2 12 ccagccagcg 1131 0.0114700995725885 0.111111111111111 1 9 2 12 NM_199151 refGene chr9 72494658 + 139089 graph_last l 15 90 cgactctgtt 1132 0.0114700995725885 0.230769230769231 3 13 5 17 gagtgattat 1133 0.0114700995725885 0.111111111111111 1 9 2 12 NM_138672 refGene chr14 25678082 + 40121 graph_last l 10 36 gcccacatcc 1134 0.0114700995725885 0.111111111111111 1 9 2 12 NM_025349 refGene chr10 83218075 + 14139 graph_second 7 67 ggcaatttta 1135 0.0114700995725885 0.111111111111111 1 9 2 12 BC023037 knownGene chr11 69484983 + 21087 graph_last l 10 84 gggagggagt 1136 0.0114700995725885 0.230769230769231 3 13 5 17 AK129215 knownGene chr3 152719953 - 90280 graph_last l 7 51 taaattgttt 1137 0.0114700995725885 0.230769230769231 3 13 5 17 tcgagcagtt 1138 0.0114700995725885 0.230769230769231 3 13 5 17 NM_028146 refGene chr8 125356919 - 134273 graph_last l 5 47 tgcacaaaga 1139 0.0114700995725885 0.111111111111111 1 9 2 12 attttttttc 1140 0.0116898645154530 0.214285714285714 3 14 6 18 NM_025789 refGene chr17 7422402 + 56847 graph_last 7 49 acccatccag 1141 0.0118280251404818 0 0 6 0 8 NM_011670 refGene chr5_random 2617542 - 109059 graph_second l 9 21 actccgtggc 1142 0.0118280251404818 0 0 6 0 8 NM_011841 refGene chr11 61059895 + 20525 graph_last 1 14 agaggcagca 1143 0.0118280251404818 0 0 6 0 8 NM_017392 refGene chr3 111532090 - 88311 graph_second 0 12 agcatcaagg 1144 0.0118280251404818 0 0 6 0 8 NM_027287 refGene chr3 156132299 + 90410 graph_last 1 10 attccagcca 1145 0.0118280251404818 0 0 6 0 8 NM_009870 refGene chr10 130337460 + 16653 graph_second 0 10 caaactgcat 1146 0.0118280251404818 0 0 6 0 8 NM_008687 refGene chr4 80902877 + 94453 graph_last 1 12 cagaggtaac 1147 0.0118280251404818 0 0 6 0 8 NM_024471 refGene chr5 64707758 + 103285 graph_last l 3 22 cagccaacga 1148 0.0118280251404818 0 0 6 0 8 NM_008241 refGene chr12 44849211 + 27632 graph_last 0 13 cctaaatttt 1149 0.0118280251404818 0 0 6 0 8 NM_033444 refGene chr17 34714269 + 58915 graph_last l 3 15 ctgtgccctc 1150 0.0118280251404818 0 0 6 0 8 NM_021504 refGene chr14 11516604 - 39213 graph_last 0 11 ctgttcagag 1151 0.0118280251404818 0 0 6 0 8 gacgagatgg 1152 0.0118280251404818 0 0 6 0 8 NM_172736 refGene chr7 4015234 - 118503 graph_last l 6 39 gcagaagggg 1153 0.0118280251404818 0 0 6 0 8 NM_008608 refGene chr14 45531325 + 41281 graph_last l 2 20 ggacgcccaa 1154 0.0118280251404818 0 0 6 0 8 gggaagtctg 1155 0.0118280251404818 0 0 6 0 8 NM_026408 refGene chr18 53289800 + 64863 graph_last 0 30 gggcagcgac 1156 0.0118280251404818 0 0 6 0 8 NM_008842 refGene chr17 29127747 + 58363 graph_second 3 13 gtagcctgca 1157 0.0118280251404818 0 0 6 0 8 NM_025735 refGene chr2 155902833 + 80638 graph_second 7 22 gtctacgcct 1158 0.0118280251404818 0 0 6 0 8 NM_008228 refGene chr4 128429117 - 97479 graph_last 0 18 gttgatttca 1159 0.0118280251404818 0 0 6 0 8 ttgctgcctt 1160 0.0118280251404818 0 0 6 0 8 tttacacttc 1161 0.0118280251404818 0 0 6 0 8 NM_008709 refGene chr12 13191380 - 26350 graph_last 2 26 tttatgaaaa 1162 0.0118280251404818 0 0 6 0 8 NM_019797 refGene chr9 68371211 + 138776 graph_last 0 8 tttttggcag 1163 0.0118280251404818 0 0 6 0 8 acaaaataaa 1164 0.0118695465083608 6 12 2 23 2 gcaagagaga 1165 0.0118695465083608 6 12 2 23 2 NM_009250 refGene chr3 77282203 + 85987 graph_last l 39 54 ttattgtaca 1166 0.0118695465083608 6 12 2 23 2 genomic chrX 52918661 - 0 unique_long l 1 769 aaaaatcatc 1167 0.0122507955051885 Inf 8 0 15 0 aaataaagcc 1168 0.0122507955051885 Inf 8 0 15 0 NM_008226 refGene chr10 82039431 + 13984 graph_last l 23 87 aatgtactga 1169 0.0122507955051885 Inf 8 0 15 0 actctttcct 1170 0.0122507955051885 Inf 8 0 15 0 NM_012038 refGene chr12 11533918 - 26294 graph_last l 20 42 agaatgtcat 1171 0.0122507955051885 Inf 8 0 15 0 atgaaataaa 1172 0.0122507955051885 Inf 8 0 15 0 AK045487 all_mrna chr7 54138162 + 121513 graph_last l 18 38 ccatcattaa 1173 0.0122507955051885 Inf 8 0 15 0 NM_183018 refGene chr1 22444413 - 897 graph_last l 15 28 ctagtgagag 1174 0.0122507955051885 Inf 8 0 15 0 NM_139153 refGene chr5 22701753 - 101135 graph_last b 31 122 ctcggtgccg 1175 0.0122507955051885 Inf 8 0 15 0 NM_019840 refGene chr4 101465240 + 95522 graph_last l 20 39 ctgtcttgcc 1176 0.0122507955051885 Inf 8 0 15 0 NM_008399 refGene chr11 72718650 - 21356 graph_last 0 58 gcaaactggg 1177 0.0122507955051885 Inf 8 0 15 0 gctaagttcc 1178 0.0122507955051885 Inf 8 0 15 0 genomic chr11 93185074 + 0 unique_long l 16 34 gctcgatcct 1179 0.0122507955051885 Inf 8 0 15 0 genomic chr13 54163511 - 0 unique_long l 21 43 ggcttcttct 1180 0.0122507955051885 Inf 8 0 15 0 AK014916 all_mrna chr9 51496996 - 137503 graph_last 0 69 ggtgtacata 1181 0.0122507955051885 Inf 8 0 15 0 NM_009722 refGene chr5 121481038 - 106753 graph_last l 11 30 tacagtgttc 1182 0.0122507955051885 Inf 8 0 15 0 NM_025277 refGene chr4 58794403 + 93598 graph_last l 54 86 tcacacgtat 1183 0.0122507955051885 Inf 8 0 15 0 tccctggtga 1184 0.0122507955051885 Inf 8 0 15 0 NM_009412 refGene chr3 9003362 - 82969 graph_last l 35 67 tgaaaatctt 1185 0.0122507955051885 Inf 8 0 15 0 tgatgaaatg 1186 0.0122507955051885 Inf 8 0 15 0 tgctcccaag 1187 0.0122507955051885 Inf 8 0 15 0 NM_011268 refGene chr11 108889276 - 24764 graph_last l 35 86 tgggccagaa 1188 0.0122507955051885 Inf 8 0 15 0 tgtataaata 1189 0.0122507955051885 Inf 8 0 15 0 genomic chr7 3354046 - 0 unique_long l 27 40 ttctgtataa 1190 0.0122507955051885 Inf 8 0 15 0 NM_052994 refGene chr10 62021810 + 12772 graph_last l 39 80 ttttagtaag 1191 0.0122507955051885 Inf 8 0 15 0 tgtggaaaga 1192 0.0122849482017506 2.54545454545455 28 11 54 14 NM_016884 refGene chr14 43945073 - 41160 graph_last 4 27 aattcccgtg 1193 0.0125899036103479 0.181818181818182 2 11 4 15 attaatcaaa 1194 0.0125899036103479 0.181818181818182 2 11 4 15 NM_178637 refGene chr19 5460618 + 67578 graph_last l 9 53 agaatgacag 1195 0.0129200065374662 0.125 1 8 1 10 cagcgagctg 1196 0.0129200065374662 0.125 1 8 1 10 NM_016686 refGene chr11 87644045 + 22842 graph_last 4 41 ccctatgttt 1197 0.0129200065374662 0.125 1 8 1 10 genomic chr13 43723207 + 0 unique_long l 8 47 ctgttgaatg 1198 0.0129200065374662 0.125 1 8 1 10 BE847433 all_est chr11 82852395 - 22348 graph_last 3 18 gcgctctgca 1199 0.0129200065374662 0.125 1 8 1 10 ggctccgggg 1200 0.0129200065374662 0.125 1 8 1 10 NM_145939 refGene chr16 20229070 - 52176 graph_last 1 32 ggtggaacgg 1201 0.0129200065374662 0.125 1 8 1 10 gtgagcttgt 1202 0.0129200065374662 0.125 1 8 1 10 NM_139272 refGene chr8 126141377 + 134336 graph_last 3 36 gtggccagtg 1203 0.0129200065374662 0.125 1 8 1 10 NM_011591 refGene chrX 6466896 + 147054 graph_last 3 21 gtgggctctg 1204 0.0129200065374662 0.125 1 8 1 10 tcaagatgat 1205 0.0129200065374662 0.125 1 8 1 10 AK129151 knownGene chr3 104498123 - 87776 graph_last 2 28 tgcagtcagt 1206 0.0129200065374662 0.125 1 8 1 10 gaataataaa 1207 0.0131185200925713 0.69047619047619 87 126 169 165 NM_008302 refGene chr17 44965211 - 59486 graph_last 291 729 gtgagcccat 1208 0.0134425842952311 1.44086021505376 134 93 260 122 NM_028224 refGene chr15 101529366 + 49935 graph_last l 37 211 cacccggcca 1209 0.013463768568704 10 10 1 19 1 NM_019634 refGene chrX 9144236 - 147217 graph_last l 47 154 ctagacagag 1210 0.013463768568704 10 10 1 19 1 cttctatttg 1211 0.013463768568704 10 10 1 19 1 NM_007727 refGene chr15 94185949 + 49433 graph_last l 34 87 ctttaagatg 1212 0.013463768568704 10 10 1 19 1 gtatactgta 1213 0.013463768568704 10 10 1 19 1 NM_198111 refGene chr12 48649939 + 27846 graph_last l 44 78 tagagaggtg 1214 0.013463768568704 10 10 1 19 1 tcaagaacaa 1215 0.013463768568704 10 10 1 19 1 tctacaagaa 1216 0.0135992029911980 0.555555555555556 30 54 58 71 NM_016743 refGene chr15 97285350 + 49595 graph_last l 127 271 gttacgtaac 1217 0.0136488811671433 3.14285714285714 22 7 42 9 NM_026025 refGene chr15 95235825 - 49499 graph_last l 58 112 cttggcgagc 1218 0.0136520908022069 6.5 13 2 25 3 NM_007874 refGene chr18 34560614 - 63762 graph_last l 64 151 gcttaagtgt 1219 0.0136520908022069 6.5 13 2 25 3 NM_009723 refGene chr6 115505700 - 116175 graph_last l 41 101 ggatacgttt 1220 0.0136520908022069 6.5 13 2 25 3 NM_010852 refGene chr2 125343315 + 78802 graph_last l 10 48 tcttcattta 1221 0.0143543992081767 0.25 4 16 8 21 NM_019535 refGene chr4 84058309 + 94668 graph_last l 76 184 gccagttttc 1222 0.014390790889785 3.33333333333333 20 6 39 8 NM_175134 refGene chr15 37287708 + 46308 graph_last l 86 224 tgttccacac 1223 0.0151946976643560 3.8 19 5 36 7 AK029707 knownGene chrX 125528359 - 151570 graph_last 23 61 ttaggcagct 1224 0.0157617758436856 0.266666666666667 4 15 7 19 agagctgtgg 1225 0.0165866898301765 0.277777777777778 5 18 10 23 gcgaaggctg 1226 0.0165866898301765 0.277777777777778 5 18 10 23 NM_011650 refGene chr1 120849495 - 5532 graph_last l 16 72 agcattggcg 1227 0.018206823063351 0.315789473684211 6 19 12 25 gtttagtgga 1228 0.018206823063351 0.315789473684211 6 19 12 25 NM_010496 refGene chr12 19542546 - 26650 graph_last l 61 309 gggagcgaaa 1229 0.0182374825766127 0.5 20 40 38 52 tctgctaaag 1230 0.0182374825766127 0.5 20 40 38 52 tcttaatgaa 1231 0.0182459205973549 2.11111111111111 38 18 73 23 BC049262 knownGene chr10 101669482 + 15243 graph_last 34 81 agcagtggtg 1232 0.0185423031685491 5.5 11 2 21 2 genomic chr12 95770479 - 0 unique_long l 21 70 caggattcct 1233 0.0185423031685491 5.5 11 2 21 2 NM_016909 refGene chr8 126836338 + 134395 graph_last l 47 96 cctggtaagt 1234 0.0185423031685491 5.5 11 2 21 2 NM_178679 refGene chr10 69779847 - 13250 graph_last l 26 73 cggactatga 1235 0.0185423031685491 5.5 11 2 21 2 BC044772 knownGene chr12 19510819 + 26628 graph_last l 43 59 ctgtttttac 1236 0.0185423031685491 5.5 11 2 21 2 NM_133769 refGene chr11 45821257 - 19420 graph_last l 39 136 gtggattttc 1237 0.0185423031685491 5.5 11 2 21 2 NM_013783 refGene chr4 153012039 - 99695 graph_last l 33 122 gtgtgccgct 1238 0.0185423031685491 5.5 11 2 21 2 NM_130862 refGene chr11 119555369 + 25505 graph_last l 56 104 tgcaatggat 1239 0.0185423031685491 5.5 11 2 21 2 NM_010882 refGene chr7 54865856 + 121556 graph_last l 79 569 tatgcaaccc 1240 0.0189065318670109 0.384615384615385 10 26 20 34 NM_008169 refGene chr2 25557785 - 72823 graph_last l 60 152 actagctctc 1241 0.0189922758551345 5.5 11 2 22 2 BB042952 all_est chr17 27384834 - 58161 graph_last l 35 74 agcttccagc 1242 0.0189922758551345 5.5 11 2 22 2 NM_033474 refGene chr16 18012617 - 52029 graph_last l 28 66 caaaccacta 1243 0.0189922758551345 5.5 11 2 22 2 ccttgacggc 1244 0.0189922758551345 5.5 11 2 22 2 NM_009760 refGene chr7 130790036 - 125863 graph_last l 54 88 ctgtatatat 1245 0.0189922758551345 5.5 11 2 22 2 NM_028207 refGene chr11 101635110 - 24017 graph_last l 59 118 ggaggtcctg 1246 0.0189922758551345 5.5 11 2 22 2 tctctgaatg 1247 0.0189922758551345 5.5 11 2 22 2 NM_015753 refGene chr2 45290945 - 74261 graph_last l 32 98 ctcgaataaa 1248 0.0196662909693875 0.3125 5 16 9 21 ttacttgttt 1249 0.0199219905930523 3 21 7 41 9 NM_130884 refGene chr2 130530736 + 79145 graph_last l 10 66 aatgataaaa 1250 0.0201402444332392 0.2 2 10 3 13 acagccgtgg 1251 0.0201402444332392 0.2 2 10 3 13 AK129143 knownGene chr18 78788467 - 66286 graph_last l 4 21 caaagagctg 1252 0.0201402444332392 0.2 2 10 3 13 NM_008453 refGene chr5 64083995 + 103230 graph_last 2 38 ccagtacctg 1253 0.0201402444332392 0.2 2 10 3 13 NM_008060 refGene chr19 9055901 - 67898 graph_last l 6 47 ctcactcttt 1254 0.0201402444332392 0.2 2 10 3 13 NM_021789 refGene chr9 46174510 - 137077 graph_last l 7 57 gacgtgaatg 1255 0.0201402444332392 0.2 2 10 3 13 NM_007742 refGene chr11 94532009 + 23230 graph_last 0 52 gggccccctg 1256 0.0201402444332392 0.2 2 10 3 13 NM_011218 refGene chr17 56341026 + 60237 graph_last l 10 61 tgggaaagat 1257 0.0201402444332392 0.2 2 10 3 13 aaattggatc 1258 0.0206519916326555 6 12 2 24 3 NM_175692 refGene chr2 159008474 - 80939 graph_last l 12 31 aagttttagt 1259 0.0206519916326555 Inf 7 0 14 0 NM_013779 refGene chr7 54897124 + 121558 graph_last 0 27 acagcgatga 1260 0.0206519916326555 Inf 7 0 13 0 NM_018790 refGene chr15 76371832 - 48009 graph_last l 26 41 acccatactc 1261 0.0206519916326555 Inf 7 0 13 0 NM_172498 refGene chr14 57879889 + 42254 graph_last l 18 42 agagaggagg 1262 0.0206519916326555 Inf 7 0 14 0 NM_011245 refGene chr9 92411079 + 140177 graph_last l 26 69 aggctgttct 1263 0.0206519916326555 Inf 7 0 13 0 NM_007510 refGene chr6 122495152 + 116693 graph_last l 39 76 atctgaaata 1264 0.0206519916326555 Inf 7 0 13 0 attggcccca 1265 0.0206519916326555 Inf 7 0 14 0 NM_022029 refGene chr9 38323536 + 136533 graph_second l 27 60 cacacgcaga 1266 0.0206519916326555 Inf 7 0 13 0 NM_152915 refGene chr1 86195624 + 4126 graph_last l 3 31 cacagaataa 1267 0.0206519916326555 Inf 7 0 13 0 NM_008113 refGene chr17 25805275 + 57991 graph_last l 39 44 cagctcccaa 1268 0.0206519916326555 Inf 7 0 14 0 NM_008791 refGene chr16 98535934 - 56369 graph_last l 44 56 catttcaggt 1269 0.0206519916326555 Inf 7 0 14 0 NM_008747 refGene chr12 17052716 + 26467 graph_last l 24 54 ccattactaa 1270 0.0206519916326555 Inf 7 0 13 0 genomic chr4 122148722 + 0 unique_long l 15 19 ccctctggaa 1271 0.0206519916326555 Inf 7 0 14 0 NM_026797 refGene chr2 165107004 + 81283 graph_last l 50 85 ccgcagggtg 1272 0.0206519916326555 Inf 7 0 14 0 NM_020269 refGene chr1 176231647 + 8558 graph_last l 55 111 ctagctaacc 1273 0.0206519916326555 Inf 7 0 14 0 X57780 knownGene chrM 2064 - 142531 graph_last 77 115 ctagtcccta 1274 0.0206519916326555 6 12 2 24 3 genomic chr11 53174549 + 0 unique_long l 30 50 ctcattataa 1275 0.0206519916326555 Inf 7 0 14 0 NM_028065 refGene chr17 46184474 - 59624 graph_last l 14 29 ctctgcccag 1276 0.0206519916326555 Inf 7 0 13 0 ctggaagagg 1277 0.0206519916326555 6 12 2 24 3 NM_011498 refGene chr6 110362975 + 115903 graph_last 26 54 ctgtccaagg 1278 0.0206519916326555 Inf 7 0 14 0 AK079373 all_mrna chr7 39322099 + 120861 graph_last l 21 42 cttgtgaccc 1279 0.0206519916326555 Inf 7 0 13 0 genomic chr19 23311685 + 0 unique_long l 14 27 ctttctgata 1280 0.0206519916326555 Inf 7 0 13 0 NM_010638 refGene chr19 23313418 + 68718 graph_last l 35 62 gaaaatctac 1281 0.0206519916326555 Inf 7 0 14 0 CA320703 all_est chr2 22896745 + 72631 graph_last l 46 101 gacaaaggat 1282 0.0206519916326555 6 12 2 24 3 gactcactga 1283 0.0206519916326555 Inf 7 0 13 0 gagaccatcg 1284 0.0206519916326555 Inf 7 0 13 0 gagctggagg 1285 0.0206519916326555 Inf 7 0 13 0 NM_133891 refGene chr4 53301980 + 93307 graph_last l 44 63 gatcatagct 1286 0.0206519916326555 Inf 7 0 14 0 genomic chr1 21106810 + 0 unique_long l 12 20 gcagggctaa 1287 0.0206519916326555 Inf 7 0 13 0 gcagtttgct 1288 0.0206519916326555 Inf 7 0 13 0 gccattttct 1289 0.0206519916326555 Inf 7 0 13 0 NM_146211 refGene chr8 71964040 - 131093 graph_last l 54 104 gcgttgagat 1290 0.0206519916326555 6 12 2 24 3 AI788965 all_est chr13 57790952 - 35315 graph_last l 37 44 gcgttttaat 1291 0.0206519916326555 Inf 7 0 13 0 gctcctgagg 1292 0.0206519916326555 Inf 7 0 13 0 NM_183216 refGene chr19 44402360 + 70020 graph_last l 14 49 gctctcctgg 1293 0.0206519916326555 Inf 7 0 13 0 ggaccagggt 1294 0.0206519916326555 Inf 7 0 14 0 NM_011123 refGene chrX 125410331 - 151562 graph_last l 63 147 ggaccgtaca 1295 0.0206519916326555 Inf 7 0 14 0 NM_009790 refGene chr12 95768835 - 30604 graph_last 0 25 ggactggggc 1296 0.0206519916326555 Inf 7 0 14 0 NM_011123 refGene chrX 125409098 + 151562 graph_last l 35 129 ggccgaggca 1297 0.0206519916326555 Inf 7 0 14 0 NM_198411 refGene chr12 108187679 - 31436 graph_last 1 53 ggggttgggg 1298 0.0206519916326555 Inf 7 0 13 0 gtcaggggga 1299 0.0206519916326555 Inf 7 0 13 0 NM_028207 refGene chr11 101636536 - 24017 graph_last l 31 53 gtctacgtat 1300 0.0206519916326555 6 12 2 24 3 gtgaccttgt 1301 0.0206519916326555 6 12 2 24 3 NM_177266 refGene chr13 95451159 - 37146 graph_last l 94 139 taaattaaga 1302 0.0206519916326555 Inf 7 0 14 0 taacaggaaa 1303 0.0206519916326555 Inf 7 0 13 0 NM_024189 refGene chr15 95085377 - 49485 graph_last l 34 57 taactattac 1304 0.0206519916326555 Inf 7 0 14 0 NM_008426 refGene chr2 55798837 + 74671 graph_last l 38 59 tacttgcagt 1305 0.0206519916326555 Inf 7 0 14 0 tagtatctgt 1306 0.0206519916326555 Inf 7 0 14 0 tattatttta 1307 0.0206519916326555 Inf 7 0 13 0 tcacattgta 1308 0.0206519916326555 Inf 7 0 13 0 NM_007421 refGene chr12 108213751 + 31438 graph_last l 32 41 tcataataaa 1309 0.0206519916326555 Inf 7 0 13 0 tcattattcc 1310 0.0206519916326555 Inf 7 0 13 0 tcccaggtcc 1311 0.0206519916326555 Inf 7 0 13 0 X68881 knownGene chr6 86615762 + 114478 graph_last l 27 30 tcccccttcc 1312 0.0206519916326555 Inf 7 0 13 0 tcccctcctg 1313 0.0206519916326555 Inf 7 0 14 0 BC044772 knownGene chr12 19510711 + 26628 graph_last l 21 34 tcctgtagca 1314 0.0206519916326555 Inf 7 0 13 0 tcgtagatac 1315 0.0206519916326555 Inf 7 0 13 0 NM_018799 refGene chr4 128521019 + 97495 graph_last l 28 66 tctatctcag 1316 0.0206519916326555 6 12 2 24 3 BI645586 all_est chr13 67345316 - 35928 graph_last 0 38 tctgtataat 1317 0.0206519916326555 Inf 7 0 13 0 tgaacacaga 1318 0.0206519916326555 Inf 7 0 13 0 NM_027439 refGene chrX 11164881 + 147275 graph_last l 143 350 tgcaaatgga 1319 0.0206519916326555 3.33333333333333 20 6 38 8 tgcacagctt 1320 0.0206519916326555 Inf 7 0 13 0 AK122475 knownGene chr10 19315111 - 10688 graph_last l 16 35 tgctgctcct 1321 0.0206519916326555 Inf 7 0 13 0 NM_009062 refGene chr1 173495047 - 8325 graph_last l 35 95 tgctttatag 1322 0.0206519916326555 Inf 7 0 14 0 genomic chr4 137237393 + 0 unique_long l 21 25 tggttgtctc 1323 0.0206519916326555 Inf 7 0 13 0 NM_174988 refGene chr2 165725310 - 81357 graph_last l 28 62 tgtcaagttg 1324 0.0206519916326555 Inf 7 0 14 0 ttaaataaat 1325 0.0206519916326555 Inf 7 0 13 0 AV340935 all_est chr7_random 15132634 + 126824 graph_last l 27 77 ttatagttgg 1326 0.0206519916326555 Inf 7 0 13 0 NM_016759 refGene chr11 102067093 - 24069 graph_last l 37 69 tttgttatag 1327 0.0206519916326555 Inf 7 0 14 0 tacacacctg 1328 0.0210473937537660 3.6 18 5 35 7 aaccgtgaat 1329 0.0213103609272522 0.333333333333333 6 18 11 23 atttgattag 1330 0.0213103609272522 0.333333333333333 6 18 11 2